Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580028927.01.T01 | XP_003616293.1 | 97.549 | 204 | 5 | 0 | 1 | 204 | 1 | 204 | 7.65E-136 | 389 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580028927.01.T01 | Q00423 | 61.353 | 207 | 46 | 4 | 1 | 204 | 1 | 176 | 1.05E-60 | 190 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580028927.01.T01 | A2Q383 | 97.549 | 204 | 5 | 0 | 1 | 204 | 1 | 204 | 3.65e-136 | 389 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047815.01 | MsG0580028927.01 | 0.829726 | 4.381158e-55 | 4.522286e-52 |
| MsG0080048258.01 | MsG0580028927.01 | 0.827459 | 1.546077e-54 | 1.493587e-51 |
| MsG0080048289.01 | MsG0580028927.01 | 0.801934 | 7.123046e-49 | 3.444644e-46 |
| MsG0080048775.01 | MsG0580028927.01 | 0.831172 | 1.940921e-55 | 2.089611e-52 |
| MsG0080048781.01 | MsG0580028927.01 | 0.833954 | 3.964222e-56 | 4.636856e-53 |
| MsG0080048797.01 | MsG0580028927.01 | 0.831217 | 1.891858e-55 | 2.039506e-52 |
| MsG0180001290.01 | MsG0580028927.01 | 0.803901 | 2.794385e-49 | 1.421116e-46 |
| MsG0180001293.01 | MsG0580028927.01 | 0.878624 | 2.415581e-69 | 1.270289e-65 |
| MsG0180001588.01 | MsG0580028927.01 | 0.814451 | 1.530674e-51 | 1.027428e-48 |
| MsG0180001719.01 | MsG0580028927.01 | 0.854589 | 1.113040e-61 | 2.498284e-58 |
| MsG0180002134.01 | MsG0580028927.01 | 0.842066 | 3.244856e-58 | 4.862471e-55 |
| MsG0180002218.01 | MsG0580028927.01 | 0.865500 | 5.647366e-65 | 1.841421e-61 |
| MsG0180002397.01 | MsG0580028927.01 | 0.866340 | 3.062136e-65 | 1.028525e-61 |
| MsG0180002428.01 | MsG0580028927.01 | 0.812435 | 4.246424e-51 | 2.699910e-48 |
| MsG0180002583.01 | MsG0580028927.01 | 0.835503 | 1.615502e-56 | 1.979379e-53 |
| MsG0180003421.01 | MsG0580028927.01 | 0.809809 | 1.575103e-50 | 9.339486e-48 |
| MsG0180003485.01 | MsG0580028927.01 | 0.814319 | 1.636905e-51 | 1.094855e-48 |
| MsG0180003658.01 | MsG0580028927.01 | 0.825150 | 5.484880e-54 | 4.958903e-51 |
| MsG0180003698.01 | MsG0580028927.01 | 0.822627 | 2.140557e-53 | 1.801510e-50 |
| MsG0180003796.01 | MsG0580028927.01 | 0.827744 | 1.321189e-54 | 1.286834e-51 |
| MsG0180003857.01 | MsG0580028927.01 | 0.882719 | 8.229486e-71 | 5.067050e-67 |
| MsG0180003905.01 | MsG0580028927.01 | 0.839528 | 1.501683e-57 | 2.079379e-54 |
| MsG0180004120.01 | MsG0580028927.01 | 0.911318 | 6.965962e-83 | 1.483554e-78 |
| MsG0180004126.01 | MsG0580028927.01 | 0.818917 | 1.525958e-52 | 1.157566e-49 |
| MsG0180004185.01 | MsG0580028927.01 | 0.848602 | 5.521656e-60 | 1.018638e-56 |
| MsG0180004299.01 | MsG0580028927.01 | 0.860571 | 1.882614e-63 | 5.169577e-60 |
| MsG0180004471.01 | MsG0580028927.01 | 0.823793 | 1.144135e-53 | 9.951552e-51 |
| MsG0180004475.01 | MsG0580028927.01 | 0.854023 | 1.622344e-61 | 3.574506e-58 |
| MsG0180004538.01 | MsG0580028927.01 | 0.877270 | 7.192333e-69 | 3.594593e-65 |
| MsG0180004583.01 | MsG0580028927.01 | 0.872963 | 2.122597e-67 | 9.052868e-64 |
| MsG0180004652.01 | MsG0580028927.01 | 0.818303 | 2.102925e-52 | 1.568237e-49 |
| MsG0180004828.01 | MsG0580028927.01 | 0.800088 | 1.698338e-48 | 7.837926e-46 |
| MsG0180004972.01 | MsG0580028927.01 | 0.847511 | 1.104539e-59 | 1.967839e-56 |
| MsG0180004994.01 | MsG0580028927.01 | 0.802148 | 6.436601e-49 | 3.129763e-46 |
| MsG0180004995.01 | MsG0580028927.01 | 0.863468 | 2.437169e-64 | 7.395021e-61 |
| MsG0180005002.01 | MsG0580028927.01 | 0.806225 | 9.120125e-50 | 4.923639e-47 |
| MsG0180005048.01 | MsG0580028927.01 | 0.887777 | 1.059295e-72 | 7.988221e-69 |
| MsG0180005655.01 | MsG0580028927.01 | 0.856128 | 3.966179e-62 | 9.369013e-59 |
| MsG0180005819.01 | MsG0580028927.01 | 0.808170 | 3.533243e-50 | 2.006124e-47 |
| MsG0180005835.01 | MsG0580028927.01 | 0.800489 | 1.406836e-48 | 6.559179e-46 |
| MsG0180006062.01 | MsG0580028927.01 | 0.832185 | 1.091707e-55 | 1.211080e-52 |
| MsG0180006133.01 | MsG0580028927.01 | 0.883005 | 6.466207e-71 | 4.027952e-67 |
| MsG0180006182.01 | MsG0580028927.01 | 0.805753 | 1.146166e-49 | 6.113597e-47 |
| MsG0280006398.01 | MsG0580028927.01 | 0.810828 | 9.494916e-51 | 5.783374e-48 |
| MsG0380012118.01 | MsG0580028927.01 | 0.803250 | 3.812665e-49 | 1.906714e-46 |
| MsG0380012818.01 | MsG0580028927.01 | 0.803943 | 2.738712e-49 | 1.394328e-46 |
| MsG0380012956.01 | MsG0580028927.01 | 0.816223 | 6.178416e-52 | 4.352363e-49 |
| MsG0380013041.01 | MsG0580028927.01 | 0.814154 | 1.780455e-51 | 1.185489e-48 |
| MsG0380013584.01 | MsG0580028927.01 | 0.844201 | 8.755611e-59 | 1.403137e-55 |
| MsG0380014542.01 | MsG0580028927.01 | 0.853335 | 2.557961e-61 | 5.508167e-58 |
| MsG0380014544.01 | MsG0580028927.01 | 0.845370 | 4.236554e-59 | 7.044421e-56 |
| MsG0380014666.01 | MsG0580028927.01 | 0.914366 | 2.086408e-84 | 5.164947e-80 |
| MsG0380014807.01 | MsG0580028927.01 | 0.808520 | 2.974201e-50 | 1.704255e-47 |
| MsG0480018526.01 | MsG0580028927.01 | 0.820845 | 5.530832e-53 | 4.426136e-50 |
| MsG0480018767.01 | MsG0580028927.01 | 0.840597 | 7.901676e-58 | 1.131024e-54 |
| MsG0480018785.01 | MsG0580028927.01 | 0.834413 | 3.040673e-56 | 3.605919e-53 |
| MsG0480019601.01 | MsG0580028927.01 | 0.852796 | 3.649056e-61 | 7.715364e-58 |
| MsG0480020366.01 | MsG0580028927.01 | 0.814142 | 1.790755e-51 | 1.191996e-48 |
| MsG0480020398.01 | MsG0580028927.01 | 0.895607 | 8.163084e-76 | 8.533606e-72 |
| MsG0480020856.01 | MsG0580028927.01 | 0.851178 | 1.051131e-60 | 2.109765e-57 |
| MsG0480020921.01 | MsG0580028927.01 | 0.805154 | 1.530520e-49 | 8.038561e-47 |
| MsG0480020926.01 | MsG0580028927.01 | 0.802498 | 5.451943e-49 | 2.674668e-46 |
| MsG0480020937.01 | MsG0580028927.01 | 0.836267 | 1.034276e-56 | 1.296908e-53 |
| MsG0480020970.01 | MsG0580028927.01 | 0.801037 | 1.087516e-48 | 5.141621e-46 |
| MsG0480021100.01 | MsG0580028927.01 | 0.860134 | 2.552767e-63 | 6.906184e-60 |
| MsG0480021175.01 | MsG0580028927.01 | 0.809445 | 1.885237e-50 | 1.107078e-47 |
| MsG0480021301.01 | MsG0580028927.01 | 0.882651 | 8.709273e-71 | 5.347305e-67 |
| MsG0480021456.01 | MsG0580028927.01 | 0.858298 | 9.070973e-63 | 2.304472e-59 |
| MsG0480021704.01 | MsG0580028927.01 | 0.814735 | 1.324331e-51 | 8.957653e-49 |
| MsG0480021773.01 | MsG0580028927.01 | 0.888610 | 5.068337e-73 | 3.954227e-69 |
| MsG0480021901.01 | MsG0580028927.01 | 0.806704 | 7.227197e-50 | 3.949451e-47 |
| MsG0480021902.01 | MsG0580028927.01 | 0.885328 | 8.937325e-72 | 6.108643e-68 |
| MsG0480022242.01 | MsG0580028927.01 | -0.800370 | 1.488064e-48 | 6.917038e-46 |
| MsG0480022307.01 | MsG0580028927.01 | 0.897617 | 1.181268e-76 | 1.345607e-72 |
| MsG0480022320.01 | MsG0580028927.01 | 0.867841 | 1.016615e-65 | 3.599991e-62 |
| MsG0480022378.01 | MsG0580028927.01 | 0.867736 | 1.098706e-65 | 3.876412e-62 |
| MsG0480022559.01 | MsG0580028927.01 | 0.832041 | 1.185497e-55 | 1.309643e-52 |
| MsG0480022784.01 | MsG0580028927.01 | 0.856216 | 3.737183e-62 | 8.853762e-59 |
| MsG0480022991.01 | MsG0580028927.01 | 0.828221 | 1.013966e-54 | 1.001514e-51 |
| MsG0480023003.01 | MsG0580028927.01 | 0.844459 | 7.460291e-59 | 1.205157e-55 |
| MsG0480023125.01 | MsG0580028927.01 | 0.810574 | 1.077452e-50 | 6.518118e-48 |
| MsG0480023414.01 | MsG0580028927.01 | 0.846307 | 2.357822e-59 | 4.040778e-56 |
| MsG0480023424.01 | MsG0580028927.01 | 0.870206 | 1.738676e-66 | 6.707331e-63 |
| MsG0480023426.01 | MsG0580028927.01 | 0.891445 | 3.947377e-74 | 3.462135e-70 |
| MsG0480023428.01 | MsG0580028927.01 | 0.846933 | 1.590566e-59 | 2.781564e-56 |
| MsG0480023484.01 | MsG0580028927.01 | 0.824020 | 1.012048e-53 | 8.857787e-51 |
| MsG0480023532.01 | MsG0580028927.01 | 0.842598 | 2.344543e-58 | 3.572684e-55 |
| MsG0480023626.01 | MsG0580028927.01 | 0.833796 | 4.341410e-56 | 5.053845e-53 |
| MsG0480023653.01 | MsG0580028927.01 | 0.835739 | 1.407980e-56 | 1.737412e-53 |
| MsG0480023679.01 | MsG0580028927.01 | 0.809146 | 2.185403e-50 | 1.273192e-47 |
| MsG0480023706.01 | MsG0580028927.01 | 0.872727 | 2.545760e-67 | 1.076740e-63 |
| MsG0480023842.01 | MsG0580028927.01 | 0.837292 | 5.665100e-57 | 7.325382e-54 |
| MsG0480024002.01 | MsG0580028927.01 | 0.882526 | 9.674950e-71 | 5.912762e-67 |
| MsG0480024019.01 | MsG0580028927.01 | 0.809109 | 2.225982e-50 | 1.295547e-47 |
| MsG0580024060.01 | MsG0580028927.01 | 0.856743 | 2.617014e-62 | 6.308103e-59 |
| MsG0580024276.01 | MsG0580028927.01 | 0.885263 | 9.452943e-72 | 6.444479e-68 |
| MsG0580024657.01 | MsG0580028927.01 | 0.812839 | 3.463404e-51 | 2.225313e-48 |
| MsG0580024742.01 | MsG0580028927.01 | 0.817497 | 3.197818e-52 | 2.332688e-49 |
| MsG0580024787.01 | MsG0580028927.01 | 0.868332 | 7.064180e-66 | 2.545382e-62 |
| MsG0580024954.01 | MsG0580028927.01 | 0.864195 | 1.447588e-64 | 4.506534e-61 |
| MsG0580025093.01 | MsG0580028927.01 | 0.803349 | 3.636921e-49 | 1.823383e-46 |
| MsG0580025177.01 | MsG0580028927.01 | 0.823015 | 1.739111e-53 | 1.479724e-50 |
| MsG0580025186.01 | MsG0580028927.01 | 0.852748 | 3.765739e-61 | 7.947784e-58 |
| MsG0580025203.01 | MsG0580028927.01 | 0.833040 | 6.700174e-56 | 7.625206e-53 |
| MsG0580025385.01 | MsG0580028927.01 | 0.804870 | 1.755492e-49 | 9.153598e-47 |
| MsG0580025464.01 | MsG0580028927.01 | 0.843257 | 1.565955e-58 | 2.436169e-55 |
| MsG0580025504.01 | MsG0580028927.01 | 0.893442 | 6.263877e-75 | 5.967009e-71 |
| MsG0580025506.01 | MsG0580028927.01 | 0.855832 | 4.842367e-62 | 1.132703e-58 |
| MsG0580025526.01 | MsG0580028927.01 | 0.825458 | 4.637657e-54 | 4.229224e-51 |
| MsG0380015090.01 | MsG0580028927.01 | 0.808812 | 2.576747e-50 | 1.487769e-47 |
| MsG0380015219.01 | MsG0580028927.01 | 0.843331 | 1.496265e-58 | 2.333471e-55 |
| MsG0380015340.01 | MsG0580028927.01 | 0.890520 | 9.145399e-74 | 7.715200e-70 |
| MsG0380015394.01 | MsG0580028927.01 | 0.846656 | 1.893592e-59 | 3.282604e-56 |
| MsG0380015402.01 | MsG0580028927.01 | 0.840900 | 6.581128e-58 | 9.509767e-55 |
| MsG0380015552.01 | MsG0580028927.01 | 0.854057 | 1.586128e-61 | 3.498874e-58 |
| MsG0380015656.01 | MsG0580028927.01 | 0.844545 | 7.074145e-59 | 1.145931e-55 |
| MsG0380015871.01 | MsG0580028927.01 | 0.807088 | 5.996661e-50 | 3.309653e-47 |
| MsG0380015954.01 | MsG0580028927.01 | 0.861408 | 1.047702e-63 | 2.961763e-60 |
| MsG0380016027.01 | MsG0580028927.01 | 0.854917 | 8.944546e-62 | 2.029446e-58 |
| MsG0380016051.01 | MsG0580028927.01 | 0.801248 | 9.849555e-49 | 4.681289e-46 |
| MsG0380016091.01 | MsG0580028927.01 | 0.836769 | 7.706212e-57 | 9.809086e-54 |
| MsG0380016092.01 | MsG0580028927.01 | 0.827335 | 1.656046e-54 | 1.594166e-51 |
| MsG0380016110.01 | MsG0580028927.01 | 0.803434 | 3.492404e-49 | 1.754833e-46 |
| MsG0380016217.01 | MsG0580028927.01 | 0.858304 | 9.030609e-63 | 2.294586e-59 |
| MsG0380016225.01 | MsG0580028927.01 | 0.845814 | 3.212270e-59 | 5.419255e-56 |
| MsG0380016250.01 | MsG0580028927.01 | 0.804477 | 2.120072e-49 | 1.094192e-46 |
| MsG0380016819.01 | MsG0580028927.01 | 0.800600 | 1.335517e-48 | 6.244245e-46 |
| MsG0380016856.01 | MsG0580028927.01 | 0.809995 | 1.436160e-50 | 8.557543e-48 |
| MsG0380017128.01 | MsG0580028927.01 | 0.851137 | 1.079119e-60 | 2.163034e-57 |
| MsG0380017150.01 | MsG0580028927.01 | 0.804373 | 2.228398e-49 | 1.147070e-46 |
| MsG0380017180.01 | MsG0580028927.01 | 0.806014 | 1.010381e-49 | 5.425262e-47 |
| MsG0380017181.01 | MsG0580028927.01 | 0.842191 | 3.005923e-58 | 4.521808e-55 |
| MsG0380017282.01 | MsG0580028927.01 | 0.806072 | 9.822112e-50 | 5.281684e-47 |
| MsG0380017332.01 | MsG0580028927.01 | 0.870943 | 9.953697e-67 | 3.943447e-63 |
| MsG0380017361.01 | MsG0580028927.01 | 0.807902 | 4.027525e-50 | 2.270420e-47 |
| MsG0380017588.01 | MsG0580028927.01 | 0.838155 | 3.401582e-57 | 4.516386e-54 |
| MsG0380017605.01 | MsG0580028927.01 | 0.846340 | 2.309864e-59 | 3.962865e-56 |
| MsG0380017632.01 | MsG0580028927.01 | 0.845594 | 3.684483e-59 | 6.170661e-56 |
| MsG0380017696.01 | MsG0580028927.01 | 0.841441 | 4.744066e-58 | 6.971827e-55 |
| MsG0380017932.01 | MsG0580028927.01 | 0.823530 | 1.317999e-53 | 1.137782e-50 |
| MsG0480018228.01 | MsG0580028927.01 | 0.905748 | 3.090570e-80 | 5.069011e-76 |
| MsG0580026343.01 | MsG0580028927.01 | 0.815524 | 8.847988e-52 | 6.114708e-49 |
| MsG0580028756.01 | MsG0580028927.01 | 0.815799 | 7.683636e-52 | 5.350367e-49 |
| MsG0580028923.01 | MsG0580028927.01 | 0.834853 | 2.357259e-56 | 2.832320e-53 |
| MsG0580028927.01 | MsG0580028955.01 | 0.882061 | 1.428107e-70 | 8.573074e-67 |
| MsG0580028927.01 | MsG0580029102.01 | 0.800803 | 1.214091e-48 | 5.705666e-46 |
| MsG0580028927.01 | MsG0580029123.01 | 0.802229 | 6.195686e-49 | 3.018768e-46 |
| MsG0580028927.01 | MsG0580029197.01 | 0.818539 | 1.859426e-52 | 1.395756e-49 |
| MsG0580028927.01 | MsG0580029591.01 | 0.879748 | 9.671602e-70 | 5.305988e-66 |
| MsG0580028927.01 | MsG0580029696.01 | 0.802841 | 4.632080e-49 | 2.292582e-46 |
| MsG0580028927.01 | MsG0580030141.01 | 0.800901 | 1.159387e-48 | 5.462556e-46 |
| MsG0580028927.01 | MsG0580030179.01 | 0.850553 | 1.575837e-60 | 3.098393e-57 |
| MsG0580028927.01 | MsG0680030628.01 | 0.820665 | 6.084866e-53 | 4.844612e-50 |
| MsG0580028927.01 | MsG0680031356.01 | 0.836381 | 9.674478e-57 | 1.217134e-53 |
| MsG0580028927.01 | MsG0680034415.01 | 0.852613 | 4.115868e-61 | 8.648729e-58 |
| MsG0580028927.01 | MsG0680034764.01 | 0.818869 | 1.565173e-52 | 1.185644e-49 |
| MsG0580028927.01 | MsG0680035350.01 | 0.820675 | 6.050280e-53 | 4.818566e-50 |
| MsG0580028927.01 | MsG0680035776.01 | 0.876616 | 1.212256e-68 | 5.915765e-65 |
| MsG0580028927.01 | MsG0680035792.01 | 0.832412 | 9.596625e-56 | 1.071832e-52 |
| MsG0580028927.01 | MsG0780036534.01 | 0.846667 | 1.880316e-59 | 3.260778e-56 |
| MsG0580028927.01 | MsG0780036553.01 | 0.848448 | 6.089664e-60 | 1.117982e-56 |
| MsG0580028927.01 | MsG0780037741.01 | 0.806911 | 6.536634e-50 | 3.591229e-47 |
| MsG0580028927.01 | MsG0780038393.01 | 0.834995 | 2.171011e-56 | 2.619751e-53 |
| MsG0580028927.01 | MsG0780038402.01 | 0.830326 | 3.127711e-55 | 3.284583e-52 |
| MsG0580028927.01 | MsG0780038736.01 | 0.891677 | 3.191987e-74 | 2.826810e-70 |
| MsG0580028927.01 | MsG0780038952.01 | 0.809697 | 1.665080e-50 | 9.843768e-48 |
| MsG0580028927.01 | MsG0780039536.01 | 0.837755 | 4.309144e-57 | 5.653250e-54 |
| MsG0580028927.01 | MsG0780039861.01 | 0.851508 | 8.479467e-61 | 1.720147e-57 |
| MsG0580028927.01 | MsG0780040118.01 | 0.805764 | 1.140070e-49 | 6.082704e-47 |
| MsG0580028927.01 | MsG0780040364.01 | 0.869407 | 3.169245e-66 | 1.188161e-62 |
| MsG0580028927.01 | MsG0780040459.01 | 0.800275 | 1.555433e-48 | 7.212663e-46 |
| MsG0580028927.01 | MsG0780040460.01 | 0.820978 | 5.154916e-53 | 4.140902e-50 |
| MsG0580028927.01 | MsG0780040554.01 | 0.809236 | 2.091186e-50 | 1.221230e-47 |
| MsG0580028927.01 | MsG0780040620.01 | 0.857815 | 1.262016e-62 | 3.154240e-59 |
| MsG0580028927.01 | MsG0780040641.01 | 0.877741 | 4.927361e-69 | 2.505652e-65 |
| MsG0580028927.01 | MsG0780040899.01 | 0.881333 | 2.619545e-70 | 1.528433e-66 |
| MsG0580028927.01 | MsG0780040978.01 | 0.817714 | 2.857552e-52 | 2.096822e-49 |
| MsG0580028927.01 | MsG0780041008.01 | 0.850232 | 1.940109e-60 | 3.775020e-57 |
| MsG0580028927.01 | MsG0780041142.01 | 0.818216 | 2.200169e-52 | 1.636821e-49 |
| MsG0580028927.01 | MsG0780041143.01 | 0.815679 | 8.171715e-52 | 5.671509e-49 |
| MsG0580028927.01 | MsG0780041232.01 | 0.810910 | 9.114986e-51 | 5.564282e-48 |
| MsG0580028927.01 | MsG0780041273.01 | 0.879685 | 1.018073e-69 | 5.571458e-66 |
| MsG0580028927.01 | MsG0780041359.01 | 0.871383 | 7.126382e-67 | 2.869001e-63 |
| MsG0580028927.01 | MsG0780041546.01 | 0.805188 | 1.505639e-49 | 7.914618e-47 |
| MsG0580028927.01 | MsG0880041837.01 | 0.849141 | 3.912049e-60 | 7.346818e-57 |
| MsG0580028927.01 | MsG0880041930.01 | 0.825162 | 5.448015e-54 | 4.927204e-51 |
| MsG0580028927.01 | MsG0880042833.01 | 0.815802 | 7.671367e-52 | 5.342207e-49 |
| MsG0580028927.01 | MsG0880042927.01 | 0.823040 | 1.715634e-53 | 1.460815e-50 |
| MsG0580028927.01 | MsG0880043684.01 | 0.820616 | 6.244187e-53 | 4.964790e-50 |
| MsG0580028927.01 | MsG0880043714.01 | 0.830282 | 3.206245e-55 | 3.362770e-52 |
| MsG0580028927.01 | MsG0880043752.01 | 0.827910 | 1.204973e-54 | 1.179377e-51 |
| MsG0580028927.01 | MsG0880044103.01 | 0.840322 | 9.326243e-58 | 1.323563e-54 |
| MsG0580028927.01 | MsG0880044437.01 | 0.839709 | 1.347190e-57 | 1.875906e-54 |
| MsG0580028927.01 | MsG0880044984.01 | 0.816415 | 5.595184e-52 | 3.962081e-49 |
| MsG0580028927.01 | MsG0880044989.01 | 0.832214 | 1.074346e-55 | 1.192784e-52 |
| MsG0580028927.01 | MsG0880045015.01 | 0.865179 | 7.124361e-65 | 2.296781e-61 |
| MsG0580028927.01 | MsG0880045356.01 | 0.854275 | 1.372013e-61 | 3.048123e-58 |
| MsG0580028927.01 | MsG0880045439.01 | 0.853960 | 1.691280e-61 | 3.718584e-58 |
| MsG0580028927.01 | MsG0880045584.01 | 0.860993 | 1.401517e-63 | 3.904844e-60 |
| MsG0580028927.01 | MsG0880045612.01 | 0.869910 | 2.172390e-66 | 8.291555e-63 |
| MsG0580028927.01 | MsG0880045647.01 | 0.894907 | 1.584224e-75 | 1.606958e-71 |
| MsG0580028927.01 | MsG0880045989.01 | 0.867579 | 1.233703e-65 | 4.329048e-62 |
| MsG0580028927.01 | MsG0880046374.01 | 0.810741 | 9.911380e-51 | 6.023137e-48 |
| MsG0580028927.01 | MsG0880046431.01 | 0.835347 | 1.768733e-56 | 2.157283e-53 |
| MsG0580028927.01 | MsG0880046859.01 | 0.834416 | 3.036148e-56 | 3.600799e-53 |
| MsG0580028927.01 | MsG0880046904.01 | 0.859532 | 3.876083e-63 | 1.026985e-59 |
| MsG0580028927.01 | MsG0880046905.01 | 0.868444 | 6.499615e-66 | 2.351291e-62 |
| MsG0580028927.01 | MsG0880046906.01 | 0.844005 | 9.878430e-59 | 1.573414e-55 |
| MsG0580028927.01 | MsG0880046993.01 | 0.822821 | 1.929544e-53 | 1.632777e-50 |
| MsG0580028927.01 | MsG0880047222.01 | 0.801494 | 8.767212e-49 | 4.192910e-46 |
| MsG0580028927.01 | MsG0880047223.01 | 0.809058 | 2.282100e-50 | 1.326353e-47 |
| MsG0580028927.01 | MsG0880047311.01 | 0.803340 | 3.653564e-49 | 1.831290e-46 |
| MsG0580028927.01 | MsG0880047649.01 | 0.881105 | 3.164876e-70 | 1.830266e-66 |
| MsG0580028927.01 | MsG0880047681.01 | 0.827194 | 1.790214e-54 | 1.716070e-51 |
| MsG0280006563.01 | MsG0580028927.01 | 0.826951 | 2.046581e-54 | 1.947888e-51 |
| MsG0280006717.01 | MsG0580028927.01 | 0.839218 | 1.807467e-57 | 2.479300e-54 |
| MsG0280007003.01 | MsG0580028927.01 | 0.825389 | 4.813347e-54 | 4.381132e-51 |
| MsG0280007688.01 | MsG0580028927.01 | 0.852915 | 3.374571e-61 | 7.162698e-58 |
| MsG0280007919.01 | MsG0580028927.01 | 0.821696 | 3.519403e-53 | 2.884146e-50 |
| MsG0280008002.01 | MsG0580028927.01 | 0.824242 | 8.977431e-54 | 7.906979e-51 |
| MsG0280009216.01 | MsG0580028927.01 | 0.814961 | 1.180044e-51 | 8.030424e-49 |
| MsG0280009866.01 | MsG0580028927.01 | 0.805623 | 1.220614e-49 | 6.488548e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580028927.01.T01 | MTR_5g078330 | 97.549 | 204 | 5 | 0 | 1 | 204 | 1 | 204 | 9.27e-140 | 389 |
| MsG0580028927.01.T01 | MTR_3g065570 | 54.545 | 198 | 63 | 7 | 1 | 194 | 1 | 175 | 1.13e-47 | 154 |
| MsG0580028927.01.T01 | MTR_8g106980 | 38.813 | 219 | 83 | 9 | 13 | 192 | 28 | 234 | 1.10e-21 | 92.0 |
| MsG0580028927.01.T01 | MTR_6g079520 | 43.000 | 100 | 45 | 3 | 13 | 100 | 43 | 142 | 7.28e-15 | 72.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580028927.01.T01 | AT1G14900 | 45.000 | 200 | 76 | 5 | 10 | 197 | 21 | 198 | 1.14e-41 | 140 |
| MsG0580028927.01.T01 | AT3G18035 | 35.772 | 123 | 40 | 1 | 13 | 96 | 66 | 188 | 2.10e-15 | 74.3 |
| MsG0580028927.01.T01 | AT3G18035 | 35.772 | 123 | 40 | 1 | 13 | 96 | 66 | 188 | 5.45e-15 | 72.8 |
| MsG0580028927.01.T01 | AT1G48620 | 48.387 | 62 | 32 | 0 | 15 | 76 | 78 | 139 | 2.66e-14 | 71.2 |
Find 96 sgRNAs with CRISPR-Local
Find 130 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAATTATTATGCATAATTT+TGG | 0.129688 | 5:-88804791 | None:intergenic |
| GGGGTCTTGGGAGGTGCATT+AGG | 0.195810 | 5:-88804232 | None:intergenic |
| TCAGTCCTTTGAACCTTCTT+TGG | 0.198015 | 5:-88804289 | None:intergenic |
| CCTCTCTTTGGTGGTGCATT+TGG | 0.255109 | 5:-88804115 | None:intergenic |
| CTTCCACTTGAAGCAGCCTT+AGG | 0.283817 | 5:-88804253 | None:intergenic |
| ATCATAGATGATTGATTAGA+TGG | 0.303766 | 5:+88804483 | MsG0580028927.01.T01:exon |
| GGTGGAGCCAATGGATCTTT+TGG | 0.315588 | 5:-88804157 | None:intergenic |
| GATCTGAGGATTGAATTTAA+AGG | 0.320514 | 5:-88803354 | None:intergenic |
| GGTCTTCCACGTCCTCTCTT+TGG | 0.323730 | 5:-88804127 | None:intergenic |
| CTTAACCAGATGAAGGAAAA+TGG | 0.327311 | 5:+88804052 | MsG0580028927.01.T01:CDS |
| TTTGGTGGTGCATTTGGATC+AGG | 0.346536 | 5:-88804109 | None:intergenic |
| GGGTCTTGGGAGGTGCATTA+GGG | 0.356682 | 5:-88804231 | None:intergenic |
| TGAAGCAGCCTTAGGGGTCT+TGG | 0.357314 | 5:-88804245 | None:intergenic |
| AGAACAATTGAATGGCCTTC+TGG | 0.359176 | 5:-88804019 | None:intergenic |
| TATAATTCATATTGTGGAAA+AGG | 0.366337 | 5:+88804866 | MsG0580028927.01.T01:three_prime_UTR |
| GTCAAACATGACAGTGACTT+TGG | 0.368090 | 5:+88804692 | MsG0580028927.01.T01:three_prime_UTR |
| TTCCACTTGAAGCAGCCTTA+GGG | 0.394198 | 5:-88804252 | None:intergenic |
| GGAGGTGCATTAGGGTCCTT+AGG | 0.395197 | 5:-88804223 | None:intergenic |
| AACTACATAGAATCAATCTA+TGG | 0.397570 | 5:+88803989 | MsG0580028927.01.T01:CDS |
| GACGACCTCTTGGCCTTGGT+GGG | 0.404356 | 5:-88804198 | None:intergenic |
| GGTGGAGATGGTGCTGGTGC+TGG | 0.421708 | 5:+88804331 | MsG0580028927.01.T01:CDS |
| GGAGGACGACCTCTTGGCCT+TGG | 0.423053 | 5:-88804202 | None:intergenic |
| ATAATTCATATTGTGGAAAA+GGG | 0.425430 | 5:+88804867 | MsG0580028927.01.T01:three_prime_UTR |
| TTCAGATGAACACAAGATAT+AGG | 0.426044 | 5:+88803262 | MsG0580028927.01.T01:five_prime_UTR |
| CTTCCCCTTCCACTAGTAGT+TGG | 0.429832 | 5:-88804412 | None:intergenic |
| GATGATTTGTTTGAACCATT+TGG | 0.430370 | 5:-88803959 | None:intergenic |
| GGACGACCTCTTGGCCTTGG+TGG | 0.430385 | 5:-88804199 | None:intergenic |
| GAAGCAGCCTTAGGGGTCTT+GGG | 0.435245 | 5:-88804244 | None:intergenic |
| TGATGTTATAATTCATATTG+TGG | 0.447457 | 5:+88804860 | MsG0580028927.01.T01:three_prime_UTR |
| TGGTGCTGGTGCTGCTGCTG+AGG | 0.458806 | 5:+88804345 | MsG0580028927.01.T01:CDS |
| GACAGAACAGCAGCTGGTGG+TGG | 0.460682 | 5:-88804175 | None:intergenic |
| ACTACTAGTGGAAGGGGAAG+GGG | 0.460928 | 5:+88804415 | MsG0580028927.01.T01:CDS |
| TAGTCTAAGAAGAGACTTGT+TGG | 0.463890 | 5:+88804654 | MsG0580028927.01.T01:three_prime_UTR |
| TCAAACATGACAGTGACTTT+GGG | 0.469100 | 5:+88804693 | MsG0580028927.01.T01:three_prime_UTR |
| TCCTTAGGAGGACGACCTCT+TGG | 0.478277 | 5:-88804208 | None:intergenic |
| GTCATCTGAGGCTTAACCTT+AGG | 0.479453 | 5:-88804445 | None:intergenic |
| AACTACTAGTGGAAGGGGAA+GGG | 0.479852 | 5:+88804414 | MsG0580028927.01.T01:CDS |
| TGTGAATTTACCTCAGGGTA+TGG | 0.486285 | 5:-88803535 | None:intergenic |
| GATGAACACAAGATATAGGT+TGG | 0.492453 | 5:+88803266 | MsG0580028927.01.T01:five_prime_UTR |
| AGTCTAAGAAGAGACTTGTT+GGG | 0.507234 | 5:+88804655 | MsG0580028927.01.T01:three_prime_UTR |
| CTTCCACGTCCTCTCTTTGG+TGG | 0.517078 | 5:-88804124 | None:intergenic |
| GATTTGCAAGAACAATTGAA+TGG | 0.519543 | 5:-88804027 | None:intergenic |
| GCAGCTGGTGGTGGAGCCAA+TGG | 0.520984 | 5:-88804166 | None:intergenic |
| GGGAAGGGGTAGGCCTCCTA+AGG | 0.528357 | 5:+88804429 | MsG0580028927.01.T01:CDS |
| GTAGATGATTATGAAGGCAC+TGG | 0.529915 | 5:+88803922 | MsG0580028927.01.T01:intron |
| AAGGCTGCTTCAAGTGGAAG+AGG | 0.531029 | 5:+88804256 | MsG0580028927.01.T01:CDS |
| ACCCCTAAGGCTGCTTCAAG+TGG | 0.532524 | 5:+88804250 | MsG0580028927.01.T01:CDS |
| ACCAAAGCCAAAAGATCCAT+TGG | 0.533769 | 5:+88804150 | MsG0580028927.01.T01:CDS |
| GCCAAGAGGTCGTCCTCCTA+AGG | 0.534326 | 5:+88804207 | MsG0580028927.01.T01:CDS |
| TCCACTTGAAGCAGCCTTAG+GGG | 0.536454 | 5:-88804251 | None:intergenic |
| ATCTGAGGCTTAACCTTAGG+AGG | 0.537376 | 5:-88804442 | None:intergenic |
| ATGAACACAAGATATAGGTT+GGG | 0.537497 | 5:+88803267 | MsG0580028927.01.T01:five_prime_UTR |
| GCTTCAAGTGGAAGAGGAAG+GGG | 0.550156 | 5:+88804262 | MsG0580028927.01.T01:CDS |
| GGTGGGGACAGAACAGCAGC+TGG | 0.550403 | 5:-88804181 | None:intergenic |
| TGCTTCAAGTGGAAGAGGAA+GGG | 0.550902 | 5:+88804261 | MsG0580028927.01.T01:CDS |
| AGGAAGGGGTAGGCCAAAGA+AGG | 0.551487 | 5:+88804276 | MsG0580028927.01.T01:CDS |
| ACAGCAACAGCAGCAACACT+TGG | 0.556119 | 5:-88804388 | None:intergenic |
| CAACTACTAGTGGAAGGGGA+AGG | 0.556781 | 5:+88804413 | MsG0580028927.01.T01:CDS |
| CCAGCACCATCTCCACCACT+TGG | 0.561242 | 5:-88804325 | None:intergenic |
| GGGTATGGAGGAAGTGAAAG+AGG | 0.561822 | 5:-88803520 | None:intergenic |
| CTGCTTCAAGTGGAAGAGGA+AGG | 0.565034 | 5:+88804260 | MsG0580028927.01.T01:CDS |
| AGCTTCAATGGCTACTCAAG+AGG | 0.565718 | 5:+88803489 | MsG0580028927.01.T01:exon |
| GTGTTGTCAAGATCTTACTT+TGG | 0.566186 | 5:+88804753 | MsG0580028927.01.T01:three_prime_UTR |
| AAATCACCTTAACCAGATGA+AGG | 0.568245 | 5:+88804045 | MsG0580028927.01.T01:CDS |
| TGCACCTCCCAAGACCCCTA+AGG | 0.569439 | 5:+88804237 | MsG0580028927.01.T01:CDS |
| TTTGTAAAATCTCCATGTAG+TGG | 0.570739 | 5:+88804625 | MsG0580028927.01.T01:three_prime_UTR |
| GAAGCACTGAATGAACCAAA+TGG | 0.572522 | 5:+88803944 | MsG0580028927.01.T01:CDS |
| GTAGTGATTAAATGTAGAAG+TGG | 0.573838 | 5:+88804537 | MsG0580028927.01.T01:three_prime_UTR |
| CTGTTCCAACTACTAGTGGA+AGG | 0.576494 | 5:+88804407 | MsG0580028927.01.T01:CDS |
| GAGGTTGATGATGATGATGC+TGG | 0.578081 | 5:+88804364 | MsG0580028927.01.T01:CDS |
| CTGCTGTTCTGTCCCCACCA+AGG | 0.579342 | 5:+88804185 | MsG0580028927.01.T01:CDS |
| TAGTGATTAAATGTAGAAGT+GGG | 0.585673 | 5:+88804538 | MsG0580028927.01.T01:three_prime_UTR |
| GTTCCAACTACTAGTGGAAG+GGG | 0.585748 | 5:+88804409 | MsG0580028927.01.T01:CDS |
| AGACTAAACTAACCACTACA+TGG | 0.595678 | 5:-88804637 | None:intergenic |
| TCAAATCCAAGTGGTGGAGA+TGG | 0.596389 | 5:+88804319 | MsG0580028927.01.T01:CDS |
| GTTGCTGTTCCAACTACTAG+TGG | 0.598369 | 5:+88804403 | MsG0580028927.01.T01:CDS |
| ACGACCTCTTGGCCTTGGTG+GGG | 0.598499 | 5:-88804197 | None:intergenic |
| GCACCACCAAAGAGAGGACG+TGG | 0.602504 | 5:+88804121 | MsG0580028927.01.T01:CDS |
| CCAAGTGGTGGAGATGGTGC+TGG | 0.603694 | 5:+88804325 | MsG0580028927.01.T01:CDS |
| AATGTTTCAAATCCAAGTGG+TGG | 0.604254 | 5:+88804313 | MsG0580028927.01.T01:CDS |
| GGGGACAGAACAGCAGCTGG+TGG | 0.609403 | 5:-88804178 | None:intergenic |
| TGTTCCAACTACTAGTGGAA+GGG | 0.611701 | 5:+88804408 | MsG0580028927.01.T01:CDS |
| ATCTATGGTGAATTACCAGA+AGG | 0.621839 | 5:+88804004 | MsG0580028927.01.T01:CDS |
| GTAGGCCAAAGAAGGTTCAA+AGG | 0.622028 | 5:+88804284 | MsG0580028927.01.T01:CDS |
| ACACTCACTTCAGTCATCTG+AGG | 0.623459 | 5:-88804457 | None:intergenic |
| GGTGCATTAGGGTCCTTAGG+AGG | 0.623591 | 5:-88804220 | None:intergenic |
| ATTAAATGTAGAAGTGGGTG+TGG | 0.625542 | 5:+88804543 | MsG0580028927.01.T01:three_prime_UTR |
| GCAGCCTTAGGGGTCTTGGG+AGG | 0.627198 | 5:-88804241 | None:intergenic |
| GAATTTACCTCAGGGTATGG+AGG | 0.638966 | 5:-88803532 | None:intergenic |
| CCAAATGCACCACCAAAGAG+AGG | 0.648545 | 5:+88804115 | MsG0580028927.01.T01:CDS |
| CTAGTGGAAGGGGAAGGGGT+AGG | 0.654025 | 5:+88804419 | MsG0580028927.01.T01:CDS |
| CTGTCCCCACCAAGGCCAAG+AGG | 0.676490 | 5:+88804193 | MsG0580028927.01.T01:CDS |
| TTCACTTCCTCCATACCCTG+AGG | 0.676529 | 5:+88803525 | MsG0580028927.01.T01:CDS |
| GAGAATGTTTCAAATCCAAG+TGG | 0.689463 | 5:+88804310 | MsG0580028927.01.T01:CDS |
| CAAGTGGAAGAGGAAGGGGT+AGG | 0.697070 | 5:+88804266 | MsG0580028927.01.T01:CDS |
| TGTGATAGTTGCAAGATCTG+AGG | 0.701586 | 5:-88803368 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAAAAATGTATTAAAGAT+TGG | - | Chr5:88803334-88803353 | None:intergenic | 15.0% |
| !! | TTTCTTGAAAAATAAGAAAA+GGG | - | Chr5:88803581-88803600 | None:intergenic | 15.0% |
| !!! | CAAATAAGGAAATTTTTTTA+GGG | + | Chr5:88803720-88803739 | MsG0580028927.01.T01:intron | 15.0% |
| !!! | TCAAATAAGGAAATTTTTTT+AGG | + | Chr5:88803719-88803738 | MsG0580028927.01.T01:intron | 15.0% |
| !!! | TGAATTATTATGCATAATTT+TGG | - | Chr5:88804794-88804813 | None:intergenic | 15.0% |
| !!! | TTTTCTTGAAAAATAAGAAA+AGG | - | Chr5:88803582-88803601 | None:intergenic | 15.0% |
| !! | AAAATCATTCAACATGTTAA+TGG | - | Chr5:88803832-88803851 | None:intergenic | 20.0% |
| !! | ATAATTCATATTGTGGAAAA+GGG | + | Chr5:88804867-88804886 | MsG0580028927.01.T01:three_prime_UTR | 20.0% |
| !! | TATAATTCATATTGTGGAAA+AGG | + | Chr5:88804866-88804885 | MsG0580028927.01.T01:three_prime_UTR | 20.0% |
| !! | TGATGTTATAATTCATATTG+TGG | + | Chr5:88804860-88804879 | MsG0580028927.01.T01:three_prime_UTR | 20.0% |
| !! | TTCTTGAAAAATAAGAAAAG+GGG | - | Chr5:88803580-88803599 | None:intergenic | 20.0% |
| !!! | AATAATTCATTTTGTGGAAA+AGG | + | Chr5:88804805-88804824 | MsG0580028927.01.T01:three_prime_UTR | 20.0% |
| !!! | ATAATTCATTTTGTGGAAAA+GGG | + | Chr5:88804806-88804825 | MsG0580028927.01.T01:three_prime_UTR | 20.0% |
| !!! | ATGCATAATAATTCATTTTG+TGG | + | Chr5:88804799-88804818 | MsG0580028927.01.T01:three_prime_UTR | 20.0% |
| !!! | TTAACAATTTTTACTCACTT+GGG | + | Chr5:88803650-88803669 | MsG0580028927.01.T01:intron | 20.0% |
| !!! | TTTAACAATTTTTACTCACT+TGG | + | Chr5:88803649-88803668 | MsG0580028927.01.T01:intron | 20.0% |
| ! | AACTACATAGAATCAATCTA+TGG | + | Chr5:88803989-88804008 | MsG0580028927.01.T01:CDS | 25.0% |
| ! | AATTTCAGCTCAATTAATCT+TGG | + | Chr5:88803784-88803803 | MsG0580028927.01.T01:intron | 25.0% |
| ! | ATCATAGATGATTGATTAGA+TGG | + | Chr5:88804483-88804502 | MsG0580028927.01.T01:exon | 25.0% |
| ! | TAGTGATTAAATGTAGAAGT+GGG | + | Chr5:88804538-88804557 | MsG0580028927.01.T01:three_prime_UTR | 25.0% |
| !! | GATTTTGTAGATGATTATGA+AGG | + | Chr5:88803916-88803935 | MsG0580028927.01.T01:intron | 25.0% |
| !!! | GCTGTTTTTGTAATCAAATA+AGG | + | Chr5:88803706-88803725 | MsG0580028927.01.T01:intron | 25.0% |
| !!! | TACAAAGACTTTTTTCTGTT+TGG | - | Chr5:88803762-88803781 | None:intergenic | 25.0% |
| AACAGCTCAAGATTACTATT+TGG | - | Chr5:88803692-88803711 | None:intergenic | 30.0% | |
| AGTTGTTCTTTGCAAAAACA+AGG | - | Chr5:88804081-88804100 | None:intergenic | 30.0% | |
| ATGAACACAAGATATAGGTT+GGG | + | Chr5:88803267-88803286 | MsG0580028927.01.T01:five_prime_UTR | 30.0% | |
| GATCTGAGGATTGAATTTAA+AGG | - | Chr5:88803357-88803376 | None:intergenic | 30.0% | |
| GATTTGCAAGAACAATTGAA+TGG | - | Chr5:88804030-88804049 | None:intergenic | 30.0% | |
| GTAGTGATTAAATGTAGAAG+TGG | + | Chr5:88804537-88804556 | MsG0580028927.01.T01:three_prime_UTR | 30.0% | |
| TTCAGATGAACACAAGATAT+AGG | + | Chr5:88803262-88803281 | MsG0580028927.01.T01:five_prime_UTR | 30.0% | |
| TTTGTAAAATCTCCATGTAG+TGG | + | Chr5:88804625-88804644 | MsG0580028927.01.T01:three_prime_UTR | 30.0% | |
| ! | GTTGAATGATTTTCTCAACA+TGG | + | Chr5:88803839-88803858 | MsG0580028927.01.T01:intron | 30.0% |
| ! | TCAAGATTACTATTTGGTGA+GGG | - | Chr5:88803686-88803705 | None:intergenic | 30.0% |
| !! | GATGATTTGTTTGAACCATT+TGG | - | Chr5:88803962-88803981 | None:intergenic | 30.0% |
| !! | TCACTATTTTCAAGCTTCAA+TGG | + | Chr5:88803477-88803496 | MsG0580028927.01.T01:exon | 30.0% |
| AAATCACCTTAACCAGATGA+AGG | + | Chr5:88804045-88804064 | MsG0580028927.01.T01:CDS | 35.0% | |
| AATGTTTCAAATCCAAGTGG+TGG | + | Chr5:88804313-88804332 | MsG0580028927.01.T01:CDS | 35.0% | |
| AGACTAAACTAACCACTACA+TGG | - | Chr5:88804640-88804659 | None:intergenic | 35.0% | |
| ATCTATGGTGAATTACCAGA+AGG | + | Chr5:88804004-88804023 | MsG0580028927.01.T01:CDS | 35.0% | |
| ATTAAATGTAGAAGTGGGTG+TGG | + | Chr5:88804543-88804562 | MsG0580028927.01.T01:three_prime_UTR | 35.0% | |
| CTTAACCAGATGAAGGAAAA+TGG | + | Chr5:88804052-88804071 | MsG0580028927.01.T01:CDS | 35.0% | |
| GAGAATGTTTCAAATCCAAG+TGG | + | Chr5:88804310-88804329 | MsG0580028927.01.T01:CDS | 35.0% | |
| GATGAACACAAGATATAGGT+TGG | + | Chr5:88803266-88803285 | MsG0580028927.01.T01:five_prime_UTR | 35.0% | |
| GTGTTGTCAAGATCTTACTT+TGG | + | Chr5:88804753-88804772 | MsG0580028927.01.T01:three_prime_UTR | 35.0% | |
| TAGTCTAAGAAGAGACTTGT+TGG | + | Chr5:88804654-88804673 | MsG0580028927.01.T01:three_prime_UTR | 35.0% | |
| TCAAACATGACAGTGACTTT+GGG | + | Chr5:88804693-88804712 | MsG0580028927.01.T01:three_prime_UTR | 35.0% | |
| ! | AAAGGGGTGTATGTTGAATT+AGG | - | Chr5:88803564-88803583 | None:intergenic | 35.0% |
| ! | AAGGGGTGTATGTTGAATTA+GGG | - | Chr5:88803563-88803582 | None:intergenic | 35.0% |
| ! | AGATATAGGTTGGGAAAAAG+AGG | + | Chr5:88803276-88803295 | MsG0580028927.01.T01:five_prime_UTR | 35.0% |
| ! | AGTCTAAGAAGAGACTTGTT+GGG | + | Chr5:88804655-88804674 | MsG0580028927.01.T01:three_prime_UTR | 35.0% |
| ! | CAAGATTACTATTTGGTGAG+GGG | - | Chr5:88803685-88803704 | None:intergenic | 35.0% |
| ! | CATTTTCCTTCATCTGGTTA+AGG | - | Chr5:88804054-88804073 | None:intergenic | 35.0% |
| ! | CTCAAGATTACTATTTGGTG+AGG | - | Chr5:88803687-88803706 | None:intergenic | 35.0% |
| ACCAAAGCCAAAAGATCCAT+TGG | + | Chr5:88804150-88804169 | MsG0580028927.01.T01:CDS | 40.0% | |
| AGAACAATTGAATGGCCTTC+TGG | - | Chr5:88804022-88804041 | None:intergenic | 40.0% | |
| GTCAAACATGACAGTGACTT+TGG | + | Chr5:88804692-88804711 | MsG0580028927.01.T01:three_prime_UTR | 40.0% | |
| TCAGTCCTTTGAACCTTCTT+TGG | - | Chr5:88804292-88804311 | None:intergenic | 40.0% | |
| TGTGAATTTACCTCAGGGTA+TGG | - | Chr5:88803538-88803557 | None:intergenic | 40.0% | |
| TGTGATAGTTGCAAGATCTG+AGG | - | Chr5:88803371-88803390 | None:intergenic | 40.0% | |
| TGTTCCAACTACTAGTGGAA+GGG | + | Chr5:88804408-88804427 | MsG0580028927.01.T01:CDS | 40.0% | |
| ! | AGGGGTGTATGTTGAATTAG+GGG | - | Chr5:88803562-88803581 | None:intergenic | 40.0% |
| ! | GTAGATGATTATGAAGGCAC+TGG | + | Chr5:88803922-88803941 | MsG0580028927.01.T01:intron | 40.0% |
| !! | GAAGCACTGAATGAACCAAA+TGG | + | Chr5:88803944-88803963 | MsG0580028927.01.T01:CDS | 40.0% |
| !!! | AATGGATCTTTTGGCTTTGG+TGG | - | Chr5:88804151-88804170 | None:intergenic | 40.0% |
| AACTACTAGTGGAAGGGGAA+GGG | + | Chr5:88804414-88804433 | MsG0580028927.01.T01:CDS | 45.0% | |
| ACACTCACTTCAGTCATCTG+AGG | - | Chr5:88804460-88804479 | None:intergenic | 45.0% | |
| AGCTTCAATGGCTACTCAAG+AGG | + | Chr5:88803489-88803508 | MsG0580028927.01.T01:exon | 45.0% | |
| CTGTTCCAACTACTAGTGGA+AGG | + | Chr5:88804407-88804426 | MsG0580028927.01.T01:CDS | 45.0% | |
| GAATTTACCTCAGGGTATGG+AGG | - | Chr5:88803535-88803554 | None:intergenic | 45.0% | |
| GGGGTGTATGTTGAATTAGG+GGG | - | Chr5:88803561-88803580 | None:intergenic | 45.0% | |
| GTAGGCCAAAGAAGGTTCAA+AGG | + | Chr5:88804284-88804303 | MsG0580028927.01.T01:CDS | 45.0% | |
| GTTCCAACTACTAGTGGAAG+GGG | + | Chr5:88804409-88804428 | MsG0580028927.01.T01:CDS | 45.0% | |
| TGCTTCAAGTGGAAGAGGAA+GGG | + | Chr5:88804261-88804280 | MsG0580028927.01.T01:CDS | 45.0% | |
| TTCCACTTGAAGCAGCCTTA+GGG | - | Chr5:88804255-88804274 | None:intergenic | 45.0% | |
| ! | ATCTGAGGCTTAACCTTAGG+AGG | - | Chr5:88804445-88804464 | None:intergenic | 45.0% |
| ! | GGTCACCATTTTCCTTCATC+TGG | - | Chr5:88804060-88804079 | None:intergenic | 45.0% |
| ! | GTCATCTGAGGCTTAACCTT+AGG | - | Chr5:88804448-88804467 | None:intergenic | 45.0% |
| ! | GTTGCTGTTCCAACTACTAG+TGG | + | Chr5:88804403-88804422 | MsG0580028927.01.T01:CDS | 45.0% |
| ! | TCAAATCCAAGTGGTGGAGA+TGG | + | Chr5:88804319-88804338 | MsG0580028927.01.T01:CDS | 45.0% |
| !! | GAGGTTGATGATGATGATGC+TGG | + | Chr5:88804364-88804383 | MsG0580028927.01.T01:CDS | 45.0% |
| !! | TTTGGTGGTGCATTTGGATC+AGG | - | Chr5:88804112-88804131 | None:intergenic | 45.0% |
| !!! | GCCAATGGATCTTTTGGCTT+TGG | - | Chr5:88804154-88804173 | None:intergenic | 45.0% |
| AAGGCTGCTTCAAGTGGAAG+AGG | + | Chr5:88804256-88804275 | MsG0580028927.01.T01:CDS | 50.0% | |
| ACAGCAACAGCAGCAACACT+TGG | - | Chr5:88804391-88804410 | None:intergenic | 50.0% | |
| ACTACTAGTGGAAGGGGAAG+GGG | + | Chr5:88804415-88804434 | MsG0580028927.01.T01:CDS | 50.0% | |
| CAACTACTAGTGGAAGGGGA+AGG | + | Chr5:88804413-88804432 | MsG0580028927.01.T01:CDS | 50.0% | |
| CCAAATGCACCACCAAAGAG+AGG | + | Chr5:88804115-88804134 | MsG0580028927.01.T01:CDS | 50.0% | |
| CTGCTTCAAGTGGAAGAGGA+AGG | + | Chr5:88804260-88804279 | MsG0580028927.01.T01:CDS | 50.0% | |
| CTTCCACTTGAAGCAGCCTT+AGG | - | Chr5:88804256-88804275 | None:intergenic | 50.0% | |
| CTTCCCCTTCCACTAGTAGT+TGG | - | Chr5:88804415-88804434 | None:intergenic | 50.0% | |
| GCTTCAAGTGGAAGAGGAAG+GGG | + | Chr5:88804262-88804281 | MsG0580028927.01.T01:CDS | 50.0% | |
| GGGTATGGAGGAAGTGAAAG+AGG | - | Chr5:88803523-88803542 | None:intergenic | 50.0% | |
| TCCACTTGAAGCAGCCTTAG+GGG | - | Chr5:88804254-88804273 | None:intergenic | 50.0% | |
| TTCACTTCCTCCATACCCTG+AGG | + | Chr5:88803525-88803544 | MsG0580028927.01.T01:CDS | 50.0% | |
| ! | AGGGGGTGTGAATTTACCTC+AGG | - | Chr5:88803544-88803563 | None:intergenic | 50.0% |
| ! | GGGGGTGTGAATTTACCTCA+GGG | - | Chr5:88803543-88803562 | None:intergenic | 50.0% |
| ! | GGTGGAGCCAATGGATCTTT+TGG | - | Chr5:88804160-88804179 | None:intergenic | 50.0% |
| !! | CCTCTCTTTGGTGGTGCATT+TGG | - | Chr5:88804118-88804137 | None:intergenic | 50.0% |
| ACCCCTAAGGCTGCTTCAAG+TGG | + | Chr5:88804250-88804269 | MsG0580028927.01.T01:CDS | 55.0% | |
| AGGAAGGGGTAGGCCAAAGA+AGG | + | Chr5:88804276-88804295 | MsG0580028927.01.T01:CDS | 55.0% | |
| CAAGTGGAAGAGGAAGGGGT+AGG | + | Chr5:88804266-88804285 | MsG0580028927.01.T01:CDS | 55.0% | |
| CTTCCACGTCCTCTCTTTGG+TGG | - | Chr5:88804127-88804146 | None:intergenic | 55.0% | |
| GAAGCAGCCTTAGGGGTCTT+GGG | - | Chr5:88804247-88804266 | None:intergenic | 55.0% | |
| GGTCTTCCACGTCCTCTCTT+TGG | - | Chr5:88804130-88804149 | None:intergenic | 55.0% | |
| GGTGCATTAGGGTCCTTAGG+AGG | - | Chr5:88804223-88804242 | None:intergenic | 55.0% | |
| TCCTTAGGAGGACGACCTCT+TGG | - | Chr5:88804211-88804230 | None:intergenic | 55.0% | |
| TGAAGCAGCCTTAGGGGTCT+TGG | - | Chr5:88804248-88804267 | None:intergenic | 55.0% | |
| ! | GGAGGTGCATTAGGGTCCTT+AGG | - | Chr5:88804226-88804245 | None:intergenic | 55.0% |
| ! | GGGTCTTGGGAGGTGCATTA+GGG | - | Chr5:88804234-88804253 | None:intergenic | 55.0% |
| CCAGCACCATCTCCACCACT+TGG | - | Chr5:88804328-88804347 | None:intergenic | 60.0% | |
| CTAGTGGAAGGGGAAGGGGT+AGG | + | Chr5:88804419-88804438 | MsG0580028927.01.T01:CDS | 60.0% | |
| CTGCTGTTCTGTCCCCACCA+AGG | + | Chr5:88804185-88804204 | MsG0580028927.01.T01:CDS | 60.0% | |
| GACAGAACAGCAGCTGGTGG+TGG | - | Chr5:88804178-88804197 | None:intergenic | 60.0% | |
| GCACCACCAAAGAGAGGACG+TGG | + | Chr5:88804121-88804140 | MsG0580028927.01.T01:CDS | 60.0% | |
| GCCAAGAGGTCGTCCTCCTA+AGG | + | Chr5:88804207-88804226 | MsG0580028927.01.T01:CDS | 60.0% | |
| TGCACCTCCCAAGACCCCTA+AGG | + | Chr5:88804237-88804256 | MsG0580028927.01.T01:CDS | 60.0% | |
| ! | CCAAGTGGTGGAGATGGTGC+TGG | + | Chr5:88804325-88804344 | MsG0580028927.01.T01:CDS | 60.0% |
| ! | GGGGTCTTGGGAGGTGCATT+AGG | - | Chr5:88804235-88804254 | None:intergenic | 60.0% |
| !! | ACGACCTCTTGGCCTTGGTG+GGG | - | Chr5:88804200-88804219 | None:intergenic | 60.0% |
| !! | GACGACCTCTTGGCCTTGGT+GGG | - | Chr5:88804201-88804220 | None:intergenic | 60.0% |
| CTGTCCCCACCAAGGCCAAG+AGG | + | Chr5:88804193-88804212 | MsG0580028927.01.T01:CDS | 65.0% | |
| GCAGCCTTAGGGGTCTTGGG+AGG | - | Chr5:88804244-88804263 | None:intergenic | 65.0% | |
| GGAGGACGACCTCTTGGCCT+TGG | - | Chr5:88804205-88804224 | None:intergenic | 65.0% | |
| GGGAAGGGGTAGGCCTCCTA+AGG | + | Chr5:88804429-88804448 | MsG0580028927.01.T01:CDS | 65.0% | |
| GGGGACAGAACAGCAGCTGG+TGG | - | Chr5:88804181-88804200 | None:intergenic | 65.0% | |
| GGTGGGGACAGAACAGCAGC+TGG | - | Chr5:88804184-88804203 | None:intergenic | 65.0% | |
| !! | GCAGCTGGTGGTGGAGCCAA+TGG | - | Chr5:88804169-88804188 | None:intergenic | 65.0% |
| !! | GGACGACCTCTTGGCCTTGG+TGG | - | Chr5:88804202-88804221 | None:intergenic | 65.0% |
| !! | GGTGGAGATGGTGCTGGTGC+TGG | + | Chr5:88804331-88804350 | MsG0580028927.01.T01:CDS | 65.0% |
| !! | TGGTGCTGGTGCTGCTGCTG+AGG | + | Chr5:88804345-88804364 | MsG0580028927.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 88803261 | 88804929 | 88803261 | ID=MsG0580028927.01;Name=MsG0580028927.01 |
| Chr5 | mRNA | 88803261 | 88804929 | 88803261 | ID=MsG0580028927.01.T01;Parent=MsG0580028927.01;Name=MsG0580028927.01.T01;_AED=0.11;_eAED=0.11;_QI=235|1|1|1|0|0.5|2|440|204 |
| Chr5 | exon | 88803261 | 88803546 | 88803261 | ID=MsG0580028927.01.T01:exon:25906;Parent=MsG0580028927.01.T01 |
| Chr5 | exon | 88803926 | 88804929 | 88803926 | ID=MsG0580028927.01.T01:exon:25907;Parent=MsG0580028927.01.T01 |
| Chr5 | five_prime_UTR | 88803261 | 88803495 | 88803261 | ID=MsG0580028927.01.T01:five_prime_utr;Parent=MsG0580028927.01.T01 |
| Chr5 | CDS | 88803496 | 88803546 | 88803496 | ID=MsG0580028927.01.T01:cds;Parent=MsG0580028927.01.T01 |
| Chr5 | CDS | 88803926 | 88804489 | 88803926 | ID=MsG0580028927.01.T01:cds;Parent=MsG0580028927.01.T01 |
| Chr5 | three_prime_UTR | 88804490 | 88804929 | 88804490 | ID=MsG0580028927.01.T01:three_prime_utr;Parent=MsG0580028927.01.T01 |
| Gene Sequence |
| Protein sequence |
