Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017128.01.T01 | XP_003603025.1 | 99.543 | 219 | 1 | 0 | 1 | 219 | 1 | 219 | 2.71E-160 | 452 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017128.01.T01 | Q69V36 | 53.54 | 226 | 90 | 5 | 1 | 219 | 7 | 224 | 7.19E-72 | 221 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017128.01.T01 | G7J6B9 | 99.543 | 219 | 1 | 0 | 1 | 219 | 1 | 219 | 1.30e-160 | 452 |
| Gene ID | Type | Classification |
|---|---|---|
| MsG0380017128.01.T01 | TF | B3 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048738.01 | MsG0380017128.01 | 0.830570 | 2.726291e-55 | 2.883356e-52 |
| MsG0080048797.01 | MsG0380017128.01 | 0.870242 | 1.691720e-66 | 6.535277e-63 |
| MsG0180001290.01 | MsG0380017128.01 | 0.825549 | 4.412212e-54 | 4.034317e-51 |
| MsG0180001293.01 | MsG0380017128.01 | 0.850693 | 1.439429e-60 | 2.843123e-57 |
| MsG0180001588.01 | MsG0380017128.01 | 0.811588 | 6.494789e-51 | 4.036130e-48 |
| MsG0180001719.01 | MsG0380017128.01 | 0.856386 | 3.332235e-62 | 7.940125e-59 |
| MsG0180002134.01 | MsG0380017128.01 | 0.821895 | 3.165371e-53 | 2.608796e-50 |
| MsG0180002135.01 | MsG0380017128.01 | 0.809534 | 1.804567e-50 | 1.062242e-47 |
| MsG0180002217.01 | MsG0380017128.01 | 0.821800 | 3.329315e-53 | 2.736455e-50 |
| MsG0180002218.01 | MsG0380017128.01 | 0.808278 | 3.350197e-50 | 1.907641e-47 |
| MsG0180002397.01 | MsG0380017128.01 | 0.823847 | 1.111192e-53 | 9.679374e-51 |
| MsG0180002404.01 | MsG0380017128.01 | 0.808267 | 3.368280e-50 | 1.917383e-47 |
| MsG0180002428.01 | MsG0380017128.01 | 0.807044 | 6.126188e-50 | 3.377401e-47 |
| MsG0180003421.01 | MsG0380017128.01 | 0.812968 | 3.245736e-51 | 2.092635e-48 |
| MsG0180003857.01 | MsG0380017128.01 | 0.854889 | 9.113148e-62 | 2.065729e-58 |
| MsG0180003905.01 | MsG0380017128.01 | 0.896605 | 3.141779e-76 | 3.424017e-72 |
| MsG0180003983.01 | MsG0380017128.01 | 0.830917 | 2.241638e-55 | 2.395426e-52 |
| MsG0180004120.01 | MsG0380017128.01 | 0.892516 | 1.477176e-74 | 1.355504e-70 |
| MsG0180004185.01 | MsG0380017128.01 | 0.835887 | 1.291224e-56 | 1.600385e-53 |
| MsG0180004299.01 | MsG0380017128.01 | 0.804016 | 2.644312e-49 | 1.348761e-46 |
| MsG0180004538.01 | MsG0380017128.01 | 0.827125 | 1.859468e-54 | 1.778731e-51 |
| MsG0180004583.01 | MsG0380017128.01 | 0.852321 | 4.985679e-61 | 1.037952e-57 |
| MsG0180004652.01 | MsG0380017128.01 | 0.841389 | 4.894747e-58 | 7.181468e-55 |
| MsG0180004705.01 | MsG0380017128.01 | 0.820736 | 5.859775e-53 | 4.674834e-50 |
| MsG0180004828.01 | MsG0380017128.01 | 0.842618 | 2.317150e-58 | 3.532985e-55 |
| MsG0180005048.01 | MsG0380017128.01 | 0.812527 | 4.054486e-51 | 2.584044e-48 |
| MsG0180005325.01 | MsG0380017128.01 | 0.809214 | 2.113164e-50 | 1.233356e-47 |
| MsG0180005655.01 | MsG0380017128.01 | 0.865646 | 5.077348e-65 | 1.664555e-61 |
| MsG0180005819.01 | MsG0380017128.01 | 0.822871 | 1.878208e-53 | 1.591560e-50 |
| MsG0180006076.01 | MsG0380017128.01 | -0.810877 | 9.263532e-51 | 5.650046e-48 |
| MsG0180006133.01 | MsG0380017128.01 | 0.803896 | 2.801401e-49 | 1.424499e-46 |
| MsG0180006183.01 | MsG0380017128.01 | 0.816847 | 4.478030e-52 | 3.208743e-49 |
| MsG0380012818.01 | MsG0380017128.01 | 0.805749 | 1.148697e-49 | 6.126367e-47 |
| MsG0380013584.01 | MsG0380017128.01 | 0.803763 | 2.984549e-49 | 1.512407e-46 |
| MsG0380014542.01 | MsG0380017128.01 | 0.844394 | 7.770553e-59 | 1.252685e-55 |
| MsG0380014544.01 | MsG0380017128.01 | 0.822489 | 2.305486e-53 | 1.932528e-50 |
| MsG0380014666.01 | MsG0380017128.01 | 0.870163 | 1.796125e-66 | 6.918472e-63 |
| MsG0380014807.01 | MsG0380017128.01 | 0.833099 | 6.476454e-56 | 7.383739e-53 |
| MsG0380015340.01 | MsG0380017128.01 | 0.870641 | 1.251655e-66 | 4.904067e-63 |
| MsG0380015394.01 | MsG0380017128.01 | 0.826854 | 2.158348e-54 | 2.048341e-51 |
| MsG0380015402.01 | MsG0380017128.01 | 0.854941 | 8.799815e-62 | 1.998228e-58 |
| MsG0380015656.01 | MsG0380017128.01 | 0.871094 | 8.875978e-67 | 3.535826e-63 |
| MsG0380015828.01 | MsG0380017128.01 | -0.810592 | 1.067550e-50 | 6.461564e-48 |
| MsG0380015871.01 | MsG0380017128.01 | 0.807721 | 4.401321e-50 | 2.469597e-47 |
| MsG0380015954.01 | MsG0380017128.01 | 0.874661 | 5.671680e-68 | 2.574096e-64 |
| MsG0380016027.01 | MsG0380017128.01 | 0.806039 | 9.984281e-50 | 5.364275e-47 |
| MsG0380016051.01 | MsG0380017128.01 | 0.800540 | 1.373850e-48 | 6.413517e-46 |
| MsG0380016091.01 | MsG0380017128.01 | 0.821174 | 4.644573e-53 | 3.751114e-50 |
| MsG0380016092.01 | MsG0380017128.01 | 0.810261 | 1.258801e-50 | 7.552507e-48 |
| MsG0380016217.01 | MsG0380017128.01 | 0.842291 | 2.828661e-58 | 4.269242e-55 |
| MsG0380016225.01 | MsG0380017128.01 | 0.812665 | 3.782171e-51 | 2.419167e-48 |
| MsG0380016250.01 | MsG0380017128.01 | 0.851522 | 8.404848e-61 | 1.705768e-57 |
| MsG0380016856.01 | MsG0380017128.01 | 0.830210 | 3.338505e-55 | 3.494427e-52 |
| MsG0380017128.01 | MsG0380017181.01 | 0.812449 | 4.217034e-51 | 2.682194e-48 |
| MsG0380017128.01 | MsG0380017332.01 | 0.863423 | 2.516930e-64 | 7.625637e-61 |
| MsG0380017128.01 | MsG0380017588.01 | 0.865045 | 7.851030e-65 | 2.519375e-61 |
| MsG0380017128.01 | MsG0380017605.01 | 0.819694 | 1.015310e-52 | 7.869070e-50 |
| MsG0380017128.01 | MsG0380017696.01 | 0.881845 | 1.710658e-70 | 1.018017e-66 |
| MsG0380017128.01 | MsG0380017826.01 | 0.858626 | 7.238940e-63 | 1.859117e-59 |
| MsG0380017128.01 | MsG0380017932.01 | 0.818426 | 1.972957e-52 | 1.476442e-49 |
| MsG0380017128.01 | MsG0380017967.01 | 0.802112 | 6.547564e-49 | 3.180727e-46 |
| MsG0380017128.01 | MsG0480018228.01 | 0.904479 | 1.175638e-79 | 1.822398e-75 |
| MsG0380017128.01 | MsG0480018486.01 | 0.803560 | 3.288601e-49 | 1.657908e-46 |
| MsG0380017128.01 | MsG0480018767.01 | 0.837920 | 3.909873e-57 | 5.154706e-54 |
| MsG0380017128.01 | MsG0480020398.01 | 0.884737 | 1.485372e-71 | 9.915231e-68 |
| MsG0380017128.01 | MsG0480020856.01 | 0.853554 | 2.212589e-61 | 4.799457e-58 |
| MsG0380017128.01 | MsG0480020937.01 | 0.851939 | 6.401038e-61 | 1.316274e-57 |
| MsG0380017128.01 | MsG0480020970.01 | 0.818210 | 2.207464e-52 | 1.641982e-49 |
| MsG0380017128.01 | MsG0480021048.01 | 0.811717 | 6.089533e-51 | 3.797220e-48 |
| MsG0380017128.01 | MsG0480021100.01 | 0.846008 | 2.843738e-59 | 4.827480e-56 |
| MsG0380017128.01 | MsG0480021301.01 | 0.837109 | 6.311154e-57 | 8.115565e-54 |
| MsG0380017128.01 | MsG0480021740.01 | 0.821468 | 3.974636e-53 | 3.236140e-50 |
| MsG0380017128.01 | MsG0480021773.01 | 0.872129 | 4.031631e-67 | 1.667618e-63 |
| MsG0380017128.01 | MsG0480021902.01 | 0.857281 | 1.816562e-62 | 4.459635e-59 |
| MsG0380017128.01 | MsG0480021977.01 | 0.813660 | 2.287493e-51 | 1.502863e-48 |
| MsG0380017128.01 | MsG0480022307.01 | 0.852137 | 5.622434e-61 | 1.163621e-57 |
| MsG0380017128.01 | MsG0480022320.01 | 0.822141 | 2.776260e-53 | 2.304097e-50 |
| MsG0380017128.01 | MsG0480022378.01 | 0.849265 | 3.612038e-60 | 6.809734e-57 |
| MsG0380017128.01 | MsG0480022784.01 | 0.833256 | 5.919626e-56 | 6.780208e-53 |
| MsG0380017128.01 | MsG0480023003.01 | 0.808171 | 3.530011e-50 | 2.004394e-47 |
| MsG0380017128.01 | MsG0480023386.01 | -0.818078 | 2.365015e-52 | 1.752694e-49 |
| MsG0380017128.01 | MsG0480023414.01 | 0.899074 | 2.838556e-77 | 3.452664e-73 |
| MsG0380017128.01 | MsG0480023424.01 | 0.843861 | 1.080169e-58 | 1.712732e-55 |
| MsG0380017128.01 | MsG0480023426.01 | 0.860187 | 2.459284e-63 | 6.665720e-60 |
| MsG0380017128.01 | MsG0480023484.01 | 0.827906 | 1.207587e-54 | 1.181777e-51 |
| MsG0380017128.01 | MsG0480023626.01 | 0.807773 | 4.291411e-50 | 2.411140e-47 |
| MsG0380017128.01 | MsG0480023706.01 | 0.890061 | 1.384996e-73 | 1.146480e-69 |
| MsG0380017128.01 | MsG0480023842.01 | 0.837312 | 5.597935e-57 | 7.243204e-54 |
| MsG0380017128.01 | MsG0480023913.01 | 0.826335 | 2.871125e-54 | 2.684680e-51 |
| MsG0380017128.01 | MsG0480024002.01 | 0.820957 | 5.210760e-53 | 4.183413e-50 |
| MsG0380017128.01 | MsG0480024019.01 | 0.838743 | 2.398060e-57 | 3.241990e-54 |
| MsG0380017128.01 | MsG0580024276.01 | 0.858211 | 9.625826e-63 | 2.437888e-59 |
| MsG0380017128.01 | MsG0580024787.01 | 0.817875 | 2.628305e-52 | 1.937133e-49 |
| MsG0380017128.01 | MsG0580025186.01 | 0.809463 | 1.869237e-50 | 1.098191e-47 |
| MsG0380017128.01 | MsG0580025464.01 | 0.839703 | 1.351898e-57 | 1.882092e-54 |
| MsG0380017128.01 | MsG0580025504.01 | 0.844192 | 8.800836e-59 | 1.410049e-55 |
| MsG0380017128.01 | MsG0580025526.01 | 0.818317 | 2.088317e-52 | 1.557948e-49 |
| MsG0380017128.01 | MsG0580025633.01 | 0.825846 | 3.751030e-54 | 3.459337e-51 |
| MsG0380017128.01 | MsG0580026343.01 | 0.876736 | 1.101841e-68 | 5.401215e-65 |
| MsG0380017128.01 | MsG0580026446.01 | 0.811292 | 7.531622e-51 | 4.643949e-48 |
| MsG0380017128.01 | MsG0580027854.01 | 0.806986 | 6.301151e-50 | 3.468622e-47 |
| MsG0380017128.01 | MsG0580028302.01 | 0.805129 | 1.549191e-49 | 8.131493e-47 |
| MsG0380017128.01 | MsG0580028364.01 | 0.808298 | 3.318291e-50 | 1.890364e-47 |
| MsG0380017128.01 | MsG0580028927.01 | 0.851137 | 1.079119e-60 | 2.163034e-57 |
| MsG0380017128.01 | MsG0580028955.01 | 0.862404 | 5.192382e-64 | 1.518828e-60 |
| MsG0380017128.01 | MsG0580029591.01 | 0.816756 | 4.692574e-52 | 3.354198e-49 |
| MsG0380017128.01 | MsG0580029696.01 | 0.836925 | 7.032510e-57 | 8.993015e-54 |
| MsG0380017128.01 | MsG0580030141.01 | 0.845173 | 4.790644e-59 | 7.915391e-56 |
| MsG0380017128.01 | MsG0580030179.01 | 0.830814 | 2.375846e-55 | 2.531024e-52 |
| MsG0380017128.01 | MsG0680031006.01 | 0.828389 | 9.235830e-55 | 9.167375e-52 |
| MsG0380017128.01 | MsG0680031356.01 | 0.833657 | 4.701272e-56 | 5.449693e-53 |
| MsG0380017128.01 | MsG0680033645.01 | 0.815954 | 7.095513e-52 | 4.961557e-49 |
| MsG0380017128.01 | MsG0680034415.01 | 0.845686 | 3.479239e-59 | 5.845053e-56 |
| MsG0380017128.01 | MsG0680035776.01 | 0.849818 | 2.533182e-60 | 4.862156e-57 |
| MsG0380017128.01 | MsG0780036553.01 | 0.820237 | 7.626353e-53 | 6.000742e-50 |
| MsG0380017128.01 | MsG0780038393.01 | 0.809011 | 2.336386e-50 | 1.356143e-47 |
| MsG0380017128.01 | MsG0780038647.01 | 0.822342 | 2.494065e-53 | 2.081866e-50 |
| MsG0380017128.01 | MsG0780038736.01 | 0.854593 | 1.110136e-61 | 2.492177e-58 |
| MsG0380017128.01 | MsG0780040554.01 | 0.842972 | 1.865763e-58 | 2.876256e-55 |
| MsG0380017128.01 | MsG0780040641.01 | 0.837523 | 4.944415e-57 | 6.439897e-54 |
| MsG0380017128.01 | MsG0780040830.01 | 0.810463 | 1.138466e-50 | 6.866896e-48 |
| MsG0380017128.01 | MsG0780040899.01 | 0.876146 | 1.761029e-68 | 8.445055e-65 |
| MsG0380017128.01 | MsG0780040978.01 | 0.869784 | 2.388335e-66 | 9.073036e-63 |
| MsG0380017128.01 | MsG0780040990.01 | 0.844726 | 6.323410e-59 | 1.030192e-55 |
| MsG0380017128.01 | MsG0780041008.01 | 0.826156 | 3.166452e-54 | 2.945783e-51 |
| MsG0380017128.01 | MsG0780041219.01 | 0.832082 | 1.157929e-55 | 1.280691e-52 |
| MsG0380017128.01 | MsG0780041232.01 | 0.852625 | 4.082565e-61 | 8.581986e-58 |
| MsG0380017128.01 | MsG0780041273.01 | 0.837428 | 5.227900e-57 | 6.788860e-54 |
| MsG0380017128.01 | MsG0780041359.01 | 0.818406 | 1.993006e-52 | 1.490643e-49 |
| MsG0380017128.01 | MsG0780041560.01 | 0.858330 | 8.872228e-63 | 2.256055e-59 |
| MsG0380017128.01 | MsG0880042833.01 | 0.810521 | 1.106261e-50 | 6.682926e-48 |
| MsG0380017128.01 | MsG0880043684.01 | 0.812276 | 4.598307e-51 | 2.911143e-48 |
| MsG0380017128.01 | MsG0880044103.01 | 0.840703 | 7.410562e-58 | 1.064306e-54 |
| MsG0380017128.01 | MsG0880044139.01 | 0.806546 | 7.804589e-50 | 4.247957e-47 |
| MsG0380017128.01 | MsG0880044259.01 | 0.802709 | 4.932942e-49 | 2.433180e-46 |
| MsG0380017128.01 | MsG0880044437.01 | 0.884192 | 2.365544e-71 | 1.546027e-67 |
| MsG0380017128.01 | MsG0880044545.01 | -0.801405 | 9.146087e-49 | 4.364119e-46 |
| MsG0380017128.01 | MsG0880045015.01 | 0.807049 | 6.110255e-50 | 3.369049e-47 |
| MsG0380017128.01 | MsG0880045356.01 | 0.869470 | 3.023379e-66 | 1.136113e-62 |
| MsG0380017128.01 | MsG0880045439.01 | 0.878119 | 3.634537e-69 | 1.874603e-65 |
| MsG0380017128.01 | MsG0880045584.01 | 0.864971 | 8.280997e-65 | 2.649658e-61 |
| MsG0380017128.01 | MsG0880045612.01 | 0.844549 | 7.058503e-59 | 1.143536e-55 |
| MsG0380017128.01 | MsG0880045647.01 | 0.888469 | 5.745986e-73 | 4.456984e-69 |
| MsG0380017128.01 | MsG0880045725.01 | 0.811192 | 7.918167e-51 | 4.869604e-48 |
| MsG0380017128.01 | MsG0880045802.01 | 0.800695 | 1.277154e-48 | 5.985588e-46 |
| MsG0380017128.01 | MsG0880045879.01 | 0.807057 | 6.087195e-50 | 3.357036e-47 |
| MsG0380017128.01 | MsG0880046010.01 | -0.804568 | 2.029759e-49 | 1.050045e-46 |
| MsG0380017128.01 | MsG0880046374.01 | 0.814972 | 1.173199e-51 | 7.986326e-49 |
| MsG0380017128.01 | MsG0880046904.01 | 0.848545 | 5.724360e-60 | 1.054151e-56 |
| MsG0380017128.01 | MsG0880046905.01 | 0.829296 | 5.573524e-55 | 5.681785e-52 |
| MsG0380017128.01 | MsG0880046906.01 | 0.845588 | 3.699209e-59 | 6.193858e-56 |
| MsG0380017128.01 | MsG0880046945.01 | 0.804963 | 1.678688e-49 | 8.773765e-47 |
| MsG0380017128.01 | MsG0880047057.01 | 0.824648 | 7.202186e-54 | 6.418837e-51 |
| MsG0380017128.01 | MsG0880047414.01 | 0.847770 | 9.372881e-60 | 1.683534e-56 |
| MsG0380017128.01 | MsG0880047649.01 | 0.846067 | 2.740258e-59 | 4.660344e-56 |
| MsG0280006717.01 | MsG0380017128.01 | 0.847565 | 1.066768e-59 | 1.903884e-56 |
| MsG0280006851.01 | MsG0380017128.01 | 0.816409 | 5.614363e-52 | 3.974945e-49 |
| MsG0280007003.01 | MsG0380017128.01 | 0.831154 | 1.960794e-55 | 2.109894e-52 |
| MsG0280007667.01 | MsG0380017128.01 | 0.803000 | 4.294304e-49 | 2.133807e-46 |
| MsG0280007688.01 | MsG0380017128.01 | 0.835200 | 1.926836e-56 | 2.339571e-53 |
| MsG0280007695.01 | MsG0380017128.01 | 0.817348 | 3.454258e-52 | 2.509363e-49 |
| MsG0280007919.01 | MsG0380017128.01 | 0.829843 | 4.102588e-55 | 4.249577e-52 |
| MsG0280008002.01 | MsG0380017128.01 | 0.823812 | 1.132458e-53 | 9.855159e-51 |
| MsG0280009216.01 | MsG0380017128.01 | 0.820210 | 7.735531e-53 | 6.082240e-50 |
| MsG0280009526.01 | MsG0380017128.01 | 0.803022 | 4.250096e-49 | 2.112979e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017128.01.T01 | MTR_3g101520 | 99.543 | 219 | 1 | 0 | 1 | 219 | 1 | 219 | 3.28e-164 | 452 |
| MsG0380017128.01.T01 | MTR_3g101520 | 95.890 | 219 | 1 | 1 | 1 | 219 | 1 | 211 | 1.79e-153 | 425 |
| MsG0380017128.01.T01 | MTR_2g102450 | 42.534 | 221 | 119 | 5 | 5 | 219 | 9 | 227 | 2.84e-44 | 153 |
| MsG0380017128.01.T01 | MTR_2g102450 | 54.464 | 112 | 51 | 0 | 108 | 219 | 62 | 173 | 1.07e-35 | 129 |
| MsG0380017128.01.T01 | MTR_4g008310 | 49.558 | 113 | 57 | 0 | 108 | 220 | 191 | 303 | 4.18e-32 | 119 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017128.01.T01 | AT5G42700 | 55.000 | 220 | 92 | 2 | 1 | 219 | 2 | 215 | 8.59e-75 | 226 |
| MsG0380017128.01.T01 | AT3G19184 | 55.856 | 222 | 88 | 4 | 1 | 219 | 1 | 215 | 5.71e-70 | 216 |
| MsG0380017128.01.T01 | AT3G19184 | 55.856 | 222 | 88 | 4 | 1 | 219 | 1 | 215 | 6.12e-70 | 215 |
| MsG0380017128.01.T01 | AT5G42700 | 54.651 | 172 | 72 | 1 | 48 | 219 | 5 | 170 | 5.37e-59 | 184 |
| MsG0380017128.01.T01 | AT5G58280 | 34.959 | 246 | 132 | 5 | 5 | 222 | 2 | 247 | 4.83e-36 | 129 |
| MsG0380017128.01.T01 | AT5G58280 | 36.607 | 224 | 126 | 5 | 5 | 222 | 2 | 215 | 1.73e-34 | 124 |
| MsG0380017128.01.T01 | AT5G58280 | 34.818 | 247 | 132 | 6 | 5 | 222 | 2 | 248 | 2.92e-34 | 124 |
Find 56 sgRNAs with CRISPR-Local
Find 203 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACCTTGAAATTCTATTTCT+AGG | 0.204642 | 3:-92410524 | None:intergenic |
| CTCATGTCACTGGTGGATTC+TGG | 0.287144 | 3:+92410778 | MsG0380017128.01.T01:CDS |
| TGAGTCTCCAACTACATATT+TGG | 0.308296 | 3:+92413112 | MsG0380017128.01.T01:CDS |
| ACAACGAGCTCTTTCTTGAT+AGG | 0.331075 | 3:-92410338 | None:intergenic |
| GTCATCACTTCGTCCCGTTT+TGG | 0.333776 | 3:-92413068 | None:intergenic |
| TCTCTCTACTCAAATCAAAA+TGG | 0.365878 | 3:-92410101 | None:intergenic |
| ACTCAAAATCAAAATCAAAA+TGG | 0.367777 | 3:+92410163 | MsG0380017128.01.T01:exon |
| TTACAGACTTCTTTGTAAAC+AGG | 0.370188 | 3:-92410398 | None:intergenic |
| CTTGATAGGGGTGCGAGGTT+TGG | 0.379420 | 3:-92410324 | None:intergenic |
| CTCGTTGTTGTTCGAAGATC+CGG | 0.408143 | 3:+92410353 | MsG0380017128.01.T01:CDS |
| TACCTAGAAATAGAATTTCA+AGG | 0.423170 | 3:+92410522 | MsG0380017128.01.T01:CDS |
| ACATATTTGGCTCACAAAAC+AGG | 0.425458 | 3:+92413125 | MsG0380017128.01.T01:CDS |
| AGTTAAACGCACTGCATTCA+AGG | 0.432696 | 3:+92413220 | MsG0380017128.01.T01:CDS |
| ATTGCTCATAACCTTGTTGA+TGG | 0.442206 | 3:+92413176 | MsG0380017128.01.T01:CDS |
| AGCATTGACTTGACAAAAGT+TGG | 0.443741 | 3:-92410750 | None:intergenic |
| TGCGTCCGACGAAGCTAGAA+TGG | 0.446516 | 3:+92410677 | MsG0380017128.01.T01:CDS |
| AGAGAGTCGCCGGAAAAGAA+TGG | 0.454260 | 3:+92410208 | MsG0380017128.01.T01:CDS |
| CAACGAGCTCTTTCTTGATA+GGG | 0.456259 | 3:-92410337 | None:intergenic |
| ATCCACCAGTGACATGAGAT+TGG | 0.459124 | 3:-92410773 | None:intergenic |
| GGAAGAAAATCAAAAGAGAA+TGG | 0.470843 | 3:+92410229 | MsG0380017128.01.T01:CDS |
| GCCTTCCAAATCATTTCTGC+AGG | 0.472041 | 3:+92413036 | MsG0380017128.01.T01:CDS |
| ATGACTTTAATTGATGAGGA+TGG | 0.480177 | 3:+92413086 | MsG0380017128.01.T01:CDS |
| GTGAAGTGATTGAGAGAGCT+TGG | 0.490518 | 3:-92410267 | None:intergenic |
| GTGGTGGATATGATAAGTAC+AGG | 0.491955 | 3:+92410634 | MsG0380017128.01.T01:CDS |
| TGCTTCCATTCTAGCTTCGT+CGG | 0.496827 | 3:-92410682 | None:intergenic |
| ACTACACAGAGCTGAGAACT+TGG | 0.499295 | 3:+92410133 | MsG0380017128.01.T01:five_prime_UTR |
| GTAAACAGGAGCAGGCATAT+TGG | 0.504680 | 3:-92410384 | None:intergenic |
| TGGATGATCAGAATCTAAAT+CGG | 0.505469 | 3:-92410730 | None:intergenic |
| GGTGCGAGGTTTGGAAGGTG+AGG | 0.511953 | 3:-92410315 | None:intergenic |
| CACAAAACAGGACTTAGTGC+TGG | 0.519162 | 3:+92413137 | MsG0380017128.01.T01:CDS |
| ATGCTCCAATCTCATGTCAC+TGG | 0.520101 | 3:+92410768 | MsG0380017128.01.T01:CDS |
| ACTTCTTTGTAAACAGGAGC+AGG | 0.521856 | 3:-92410392 | None:intergenic |
| CTCCAATCTCATGTCACTGG+TGG | 0.526085 | 3:+92410771 | MsG0380017128.01.T01:CDS |
| CGAAGCTAGAATGGAAGCAA+TGG | 0.532880 | 3:+92410686 | MsG0380017128.01.T01:CDS |
| TTGTGAGCCAAATATGTAGT+TGG | 0.534295 | 3:-92413119 | None:intergenic |
| TTGCTCATAACCTTGTTGAT+GGG | 0.536210 | 3:+92413177 | MsG0380017128.01.T01:CDS |
| GACTTTAATTGATGAGGATG+GGG | 0.536969 | 3:+92413088 | MsG0380017128.01.T01:CDS |
| AGGCATATTGGCGACACGAC+CGG | 0.537317 | 3:-92410372 | None:intergenic |
| TCCTGCAGAAATGATTTGGA+AGG | 0.537387 | 3:-92413037 | None:intergenic |
| GTGCGAGGTTTGGAAGGTGA+GGG | 0.543398 | 3:-92410314 | None:intergenic |
| TGACTTTAATTGATGAGGAT+GGG | 0.546142 | 3:+92413087 | MsG0380017128.01.T01:CDS |
| TGTCACTGGTGGATTCTGGC+TGG | 0.546764 | 3:+92410782 | MsG0380017128.01.T01:CDS |
| TGCTCATAACCTTGTTGATG+GGG | 0.557712 | 3:+92413178 | MsG0380017128.01.T01:CDS |
| ATAGGGGTGCGAGGTTTGGA+AGG | 0.572029 | 3:-92410320 | None:intergenic |
| AACGAGCTCTTTCTTGATAG+GGG | 0.578112 | 3:-92410336 | None:intergenic |
| GGACTTAGTGCTGGATGGAG+AGG | 0.579069 | 3:+92413146 | MsG0380017128.01.T01:CDS |
| GTACAGGGATTATTCGAAGC+GGG | 0.591336 | 3:+92410650 | MsG0380017128.01.T01:CDS |
| AAACAGGACTTAGTGCTGGA+TGG | 0.601864 | 3:+92413141 | MsG0380017128.01.T01:CDS |
| CATCATACGAAGAGAGTCGC+CGG | 0.603151 | 3:+92410198 | MsG0380017128.01.T01:CDS |
| AGTGATGACTTTAATTGATG+AGG | 0.610611 | 3:+92413082 | MsG0380017128.01.T01:CDS |
| CAAAATCAAAATCAAAATGG+TGG | 0.614271 | 3:+92410166 | MsG0380017128.01.T01:exon |
| TAGAATGGAAGCAATGGAGA+AGG | 0.631866 | 3:+92410692 | MsG0380017128.01.T01:CDS |
| TGGTGGATATGATAAGTACA+GGG | 0.664434 | 3:+92410635 | MsG0380017128.01.T01:CDS |
| TCTTTCTTGATAGGGGTGCG+AGG | 0.664811 | 3:-92410329 | None:intergenic |
| TTAAAGCATCCCCATCAACA+AGG | 0.671282 | 3:-92413187 | None:intergenic |
| AGTACAGGGATTATTCGAAG+CGG | 0.715139 | 3:+92410649 | MsG0380017128.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGTATCTTATTTTTATTAA+AGG | - | Chr3:92411323-92411342 | None:intergenic | 10.0% |
| !!! | AGTATCTTATTTTTATTAAA+GGG | - | Chr3:92411322-92411341 | None:intergenic | 10.0% |
| !!! | TAATTTAATTTATTTGTACA+AGG | - | Chr3:92412901-92412920 | None:intergenic | 10.0% |
| !! | AACATAACATATATAATAGT+TGG | - | Chr3:92412793-92412812 | None:intergenic | 15.0% |
| !! | ACATAACATATATAATAGTT+GGG | - | Chr3:92412792-92412811 | None:intergenic | 15.0% |
| !! | ATACAACTACAATTTATAAT+TGG | + | Chr3:92412983-92413002 | MsG0380017128.01.T01:intron | 15.0% |
| !! | TATAAAGATGTTAAAAAAAG+AGG | + | Chr3:92410927-92410946 | MsG0380017128.01.T01:intron | 15.0% |
| !! | TATTATATATGTTATGTTGA+GGG | + | Chr3:92412795-92412814 | MsG0380017128.01.T01:intron | 15.0% |
| !! | TTGACAAATTTAAATCTATA+TGG | + | Chr3:92412755-92412774 | MsG0380017128.01.T01:intron | 15.0% |
| !! | TTTCATAATATAAAATGAAG+TGG | + | Chr3:92411576-92411595 | MsG0380017128.01.T01:intron | 15.0% |
| !!! | GTATCTTATTTTTATTAAAG+GGG | - | Chr3:92411321-92411340 | None:intergenic | 15.0% |
| !!! | TTATAATTGGTTAATCATTT+TGG | + | Chr3:92412996-92413015 | MsG0380017128.01.T01:intron | 15.0% |
| !! | AAAAAACATACATTAGACAA+TGG | - | Chr3:92411636-92411655 | None:intergenic | 20.0% |
| !! | AATTGTCTATTGTATGTTTA+TGG | + | Chr3:92411665-92411684 | MsG0380017128.01.T01:intron | 20.0% |
| !! | ACTCAAAATCAAAATCAAAA+TGG | + | Chr3:92410163-92410182 | MsG0380017128.01.T01:exon | 20.0% |
| !! | AGTAAATAATCTAATATAGG+TGG | - | Chr3:92411816-92411835 | None:intergenic | 20.0% |
| !! | ATTGTCTATTGTATGTTTAT+GGG | + | Chr3:92411666-92411685 | MsG0380017128.01.T01:intron | 20.0% |
| !! | CTATTATATATGTTATGTTG+AGG | + | Chr3:92412794-92412813 | MsG0380017128.01.T01:intron | 20.0% |
| !! | GAGAGTAAATAATCTAATAT+AGG | - | Chr3:92411819-92411838 | None:intergenic | 20.0% |
| !! | GTAAATAATCTAATATAGGT+GGG | - | Chr3:92411815-92411834 | None:intergenic | 20.0% |
| !!! | ATTAACATTCTCTCTTTTAA+TGG | - | Chr3:92411358-92411377 | None:intergenic | 20.0% |
| !!! | GAAAATGTAATGAATTTTTC+TGG | - | Chr3:92411415-92411434 | None:intergenic | 20.0% |
| !!! | TCTATTTCTAGGTATTTTAA+CGG | - | Chr3:92410516-92410535 | None:intergenic | 20.0% |
| ! | AAGAGATACAAAATTTGAGT+TGG | - | Chr3:92412516-92412535 | None:intergenic | 25.0% |
| ! | AGTAATAGAGAAAGATGAAA+TGG | - | Chr3:92410446-92410465 | None:intergenic | 25.0% |
| ! | CAAAATCAAAATCAAAATGG+TGG | + | Chr3:92410166-92410185 | MsG0380017128.01.T01:exon | 25.0% |
| ! | CGAATAAAATTATGTCATTC+TGG | + | Chr3:92412835-92412854 | MsG0380017128.01.T01:intron | 25.0% |
| ! | CTTTATAAACGAAAACACAT+AGG | - | Chr3:92412658-92412677 | None:intergenic | 25.0% |
| ! | TACCTAGAAATAGAATTTCA+AGG | + | Chr3:92410522-92410541 | MsG0380017128.01.T01:CDS | 25.0% |
| ! | TGAAGAAAGAAAATTGACAT+TGG | - | Chr3:92411501-92411520 | None:intergenic | 25.0% |
| !! | AACCTTGAAATTCTATTTCT+AGG | - | Chr3:92410527-92410546 | None:intergenic | 25.0% |
| !! | AATGTAATGAATTTTTCTGG+TGG | - | Chr3:92411412-92411431 | None:intergenic | 25.0% |
| !! | ACTCAACAAAATCTTGTTTA+AGG | + | Chr3:92411715-92411734 | MsG0380017128.01.T01:intron | 25.0% |
| !! | CATTTTGTATGTATAAATGC+TGG | + | Chr3:92410982-92411001 | MsG0380017128.01.T01:intron | 25.0% |
| !!! | AGTTCACTTTTTTATTACTG+TGG | + | Chr3:92410873-92410892 | MsG0380017128.01.T01:intron | 25.0% |
| !!! | ATAAATGCTGGTTTTGTTAT+TGG | + | Chr3:92410994-92411013 | MsG0380017128.01.T01:intron | 25.0% |
| !!! | ATATTTTTTGTGTGTAGATG+TGG | + | Chr3:92410615-92410634 | MsG0380017128.01.T01:intron | 25.0% |
| !!! | ATTTGTTTTGGCTTTAAATG+AGG | - | Chr3:92411961-92411980 | None:intergenic | 25.0% |
| AAAACCTATACTACTCTCTA+TGG | + | Chr3:92411450-92411469 | MsG0380017128.01.T01:intron | 30.0% | |
| AACATTCGTTGTAACTACTT+TGG | + | Chr3:92411599-92411618 | MsG0380017128.01.T01:intron | 30.0% | |
| AAGCCAAAACAAATCTTTGT+AGG | + | Chr3:92411967-92411986 | MsG0380017128.01.T01:intron | 30.0% | |
| AATGCTTCCATTGAGTAAAA+AGG | - | Chr3:92411190-92411209 | None:intergenic | 30.0% | |
| AATTTATTTGTACAAGGCTC+TGG | - | Chr3:92412895-92412914 | None:intergenic | 30.0% | |
| ACATTCGTTGTAACTACTTT+GGG | + | Chr3:92411600-92411619 | MsG0380017128.01.T01:intron | 30.0% | |
| AGGTACTTGAAAAAGAGTAA+CGG | - | Chr3:92411114-92411133 | None:intergenic | 30.0% | |
| AGTGATGACTTTAATTGATG+AGG | + | Chr3:92413082-92413101 | MsG0380017128.01.T01:CDS | 30.0% | |
| ATGACTTTAATTGATGAGGA+TGG | + | Chr3:92413086-92413105 | MsG0380017128.01.T01:CDS | 30.0% | |
| ATGCTTCCATTGAGTAAAAA+GGG | - | Chr3:92411189-92411208 | None:intergenic | 30.0% | |
| CATTTCCATGGACTTAAAAT+AGG | - | Chr3:92412369-92412388 | None:intergenic | 30.0% | |
| GCATTCAAAGCAATAACTAA+AGG | - | Chr3:92411134-92411153 | None:intergenic | 30.0% | |
| GCTAGTTGTATTGAATTGAA+AGG | - | Chr3:92412926-92412945 | None:intergenic | 30.0% | |
| GGAAGAAAATCAAAAGAGAA+TGG | + | Chr3:92410229-92410248 | MsG0380017128.01.T01:CDS | 30.0% | |
| TCTCTCTACTCAAATCAAAA+TGG | - | Chr3:92410104-92410123 | None:intergenic | 30.0% | |
| TGACTTTAATTGATGAGGAT+GGG | + | Chr3:92413087-92413106 | MsG0380017128.01.T01:CDS | 30.0% | |
| TGGATGATCAGAATCTAAAT+CGG | - | Chr3:92410733-92410752 | None:intergenic | 30.0% | |
| TGTATGTTTATGGGTTTACT+AGG | + | Chr3:92411675-92411694 | MsG0380017128.01.T01:intron | 30.0% | |
| TTACAGACTTCTTTGTAAAC+AGG | - | Chr3:92410401-92410420 | None:intergenic | 30.0% | |
| ! | AGAGATTAGTTACTGCTAAA+GGG | + | Chr3:92412859-92412878 | MsG0380017128.01.T01:intron | 30.0% |
| ! | GATTTTCTTCCATTCTTTTC+CGG | - | Chr3:92410220-92410239 | None:intergenic | 30.0% |
| ! | TTGTAACTACTTTGGGAATT+TGG | + | Chr3:92411607-92411626 | MsG0380017128.01.T01:intron | 30.0% |
| ! | TTTTTCCTGCAGAAATGATT+TGG | - | Chr3:92413044-92413063 | None:intergenic | 30.0% |
| !! | AATGAATTTTTCTGGTGGAA+GGG | - | Chr3:92411407-92411426 | None:intergenic | 30.0% |
| !! | GTTCCTACAAAGATTTGTTT+TGG | - | Chr3:92411973-92411992 | None:intergenic | 30.0% |
| !! | TAATGAATTTTTCTGGTGGA+AGG | - | Chr3:92411408-92411427 | None:intergenic | 30.0% |
| !! | TTGCTTTGAATGCTTTTCAA+TGG | + | Chr3:92411141-92411160 | MsG0380017128.01.T01:intron | 30.0% |
| !!! | GGTTTTGTTATTGGTTTCAA+TGG | + | Chr3:92411003-92411022 | MsG0380017128.01.T01:intron | 30.0% |
| !!! | TTTTTTTTGTGTGTGTGTGT+TGG | + | Chr3:92411868-92411887 | MsG0380017128.01.T01:intron | 30.0% |
| AAAGTTAGTAGTCACTAGTC+AGG | - | Chr3:92411537-92411556 | None:intergenic | 35.0% | |
| AATAAACAGAGTTCAAGCCA+TGG | - | Chr3:92411033-92411052 | None:intergenic | 35.0% | |
| AATGCTCCCATTGAATAAAG+GGG | - | Chr3:92411256-92411275 | None:intergenic | 35.0% | |
| ACTTAAGTCTATAGCTCACA+TGG | + | Chr3:92412272-92412291 | MsG0380017128.01.T01:intron | 35.0% | |
| AGAATGCTCCCATTGAATAA+AGG | - | Chr3:92411258-92411277 | None:intergenic | 35.0% | |
| AGATAGAAAACACACCACAA+AGG | + | Chr3:92412303-92412322 | MsG0380017128.01.T01:intron | 35.0% | |
| ATTGCTCATAACCTTGTTGA+TGG | + | Chr3:92413176-92413195 | MsG0380017128.01.T01:CDS | 35.0% | |
| GAAAGATGAAATGGTGAATG+TGG | - | Chr3:92410437-92410456 | None:intergenic | 35.0% | |
| GAATGCTCCCATTGAATAAA+GGG | - | Chr3:92411257-92411276 | None:intergenic | 35.0% | |
| GACTTTAATTGATGAGGATG+GGG | + | Chr3:92413088-92413107 | MsG0380017128.01.T01:CDS | 35.0% | |
| TCAAGTCCCCTTTATTCAAT+GGG | + | Chr3:92411247-92411266 | MsG0380017128.01.T01:intron | 35.0% | |
| TGAAATGGTGAATGTGGATT+AGG | - | Chr3:92410431-92410450 | None:intergenic | 35.0% | |
| TGAGTCTCCAACTACATATT+TGG | + | Chr3:92413112-92413131 | MsG0380017128.01.T01:CDS | 35.0% | |
| TGCTTCCATTGAGTAAAAAG+GGG | - | Chr3:92411188-92411207 | None:intergenic | 35.0% | |
| TTCAAGTCCCCTTTATTCAA+TGG | + | Chr3:92411246-92411265 | MsG0380017128.01.T01:intron | 35.0% | |
| TTGCTCATAACCTTGTTGAT+GGG | + | Chr3:92413177-92413196 | MsG0380017128.01.T01:CDS | 35.0% | |
| TTGTGAGCCAAATATGTAGT+TGG | - | Chr3:92413122-92413141 | None:intergenic | 35.0% | |
| ! | AAGGTTTGTTCTTTCTTCTG+TGG | + | Chr3:92410541-92410560 | MsG0380017128.01.T01:intron | 35.0% |
| ! | ACATATTTGGCTCACAAAAC+AGG | + | Chr3:92413125-92413144 | MsG0380017128.01.T01:CDS | 35.0% |
| ! | ATCTAATATAGGTGGGTTTC+TGG | - | Chr3:92411808-92411827 | None:intergenic | 35.0% |
| ! | CAGAGATTAGTTACTGCTAA+AGG | + | Chr3:92412858-92412877 | MsG0380017128.01.T01:intron | 35.0% |
| ! | CTTTTCAATGGAAGTTGTTG+AGG | + | Chr3:92411153-92411172 | MsG0380017128.01.T01:intron | 35.0% |
| ! | GAAATGGTGAATGTGGATTA+GGG | - | Chr3:92410430-92410449 | None:intergenic | 35.0% |
| ! | GCTTATGCACTTTTACTGAA+TGG | + | Chr3:92411060-92411079 | MsG0380017128.01.T01:intron | 35.0% |
| ! | TGATTACTTGGGTTAGACTA+GGG | - | Chr3:92412590-92412609 | None:intergenic | 35.0% |
| ! | TGGTGGATATGATAAGTACA+GGG | + | Chr3:92410635-92410654 | MsG0380017128.01.T01:CDS | 35.0% |
| ! | TTATGCCCCTTTTTACTCAA+TGG | + | Chr3:92411180-92411199 | MsG0380017128.01.T01:intron | 35.0% |
| ! | TTGGTTTCAATGGTTTTCCA+TGG | + | Chr3:92411013-92411032 | MsG0380017128.01.T01:intron | 35.0% |
| !! | AGCATTGACTTGACAAAAGT+TGG | - | Chr3:92410753-92410772 | None:intergenic | 35.0% |
| !! | ATGAATTTTTCTGGTGGAAG+GGG | - | Chr3:92411406-92411425 | None:intergenic | 35.0% |
| !!! | TTTTTTGTGTGTAGATGTGG+TGG | + | Chr3:92410618-92410637 | MsG0380017128.01.T01:intron | 35.0% |
| AACACATAGGTGTACATCAG+AGG | - | Chr3:92412645-92412664 | None:intergenic | 40.0% | |
| AACGAGCTCTTTCTTGATAG+GGG | - | Chr3:92410339-92410358 | None:intergenic | 40.0% | |
| AATCTCACCGTTCATTTGTG+GGG | + | Chr3:92411934-92411953 | MsG0380017128.01.T01:intron | 40.0% | |
| ACAACGAGCTCTTTCTTGAT+AGG | - | Chr3:92410341-92410360 | None:intergenic | 40.0% | |
| ACCCAAGTTGTAATTGTGAC+TGG | + | Chr3:92412082-92412101 | MsG0380017128.01.T01:intron | 40.0% | |
| ACTTCTTTGTAAACAGGAGC+AGG | - | Chr3:92410395-92410414 | None:intergenic | 40.0% | |
| AGATAGAACACACACCAGAA+AGG | + | Chr3:92412427-92412446 | MsG0380017128.01.T01:intron | 40.0% | |
| AGGAACTAACCCACCAAAAT+TGG | + | Chr3:92411987-92412006 | MsG0380017128.01.T01:intron | 40.0% | |
| AGGGGCTTGAAAGATTGTAA+CGG | - | Chr3:92411303-92411322 | None:intergenic | 40.0% | |
| AGTACAGGGATTATTCGAAG+CGG | + | Chr3:92410649-92410668 | MsG0380017128.01.T01:CDS | 40.0% | |
| AGTTAAACGCACTGCATTCA+AGG | + | Chr3:92413220-92413239 | MsG0380017128.01.T01:CDS | 40.0% | |
| CAACGAGCTCTTTCTTGATA+GGG | - | Chr3:92410340-92410359 | None:intergenic | 40.0% | |
| CAATCTCACCGTTCATTTGT+GGG | + | Chr3:92411933-92411952 | MsG0380017128.01.T01:intron | 40.0% | |
| CAGGAAAAACCTTCCAAAAC+GGG | + | Chr3:92413055-92413074 | MsG0380017128.01.T01:CDS | 40.0% | |
| GCAGGAAAAACCTTCCAAAA+CGG | + | Chr3:92413054-92413073 | MsG0380017128.01.T01:CDS | 40.0% | |
| GCCAGTCACAATTACAACTT+GGG | - | Chr3:92412086-92412105 | None:intergenic | 40.0% | |
| GTCACAATTACAACTTGGGT+TGG | - | Chr3:92412082-92412101 | None:intergenic | 40.0% | |
| GTGTGTGTGTGTGATTACTT+GGG | - | Chr3:92412601-92412620 | None:intergenic | 40.0% | |
| TAACCCACCAAAATTGGCAT+TGG | + | Chr3:92411993-92412012 | MsG0380017128.01.T01:intron | 40.0% | |
| TAGAATGGAAGCAATGGAGA+AGG | + | Chr3:92410692-92410711 | MsG0380017128.01.T01:CDS | 40.0% | |
| TGCATTCTTTGCTTCCTTTC+TGG | - | Chr3:92412444-92412463 | None:intergenic | 40.0% | |
| TGCATTCTTTGCTTCCTTTG+TGG | - | Chr3:92412320-92412339 | None:intergenic | 40.0% | |
| TGCCAGTCACAATTACAACT+TGG | - | Chr3:92412087-92412106 | None:intergenic | 40.0% | |
| TGCTCATAACCTTGTTGATG+GGG | + | Chr3:92413178-92413197 | MsG0380017128.01.T01:CDS | 40.0% | |
| TGTGTGTGTGTGTGATTACT+TGG | - | Chr3:92412602-92412621 | None:intergenic | 40.0% | |
| ! | AGTGTGTTACTGTTGAGTGA+GGG | - | Chr3:92412553-92412572 | None:intergenic | 40.0% |
| ! | ATTCCCTCCAATGCCAATTT+TGG | - | Chr3:92412003-92412022 | None:intergenic | 40.0% |
| ! | GTGATTACTTGGGTTAGACT+AGG | - | Chr3:92412591-92412610 | None:intergenic | 40.0% |
| ! | TCCTGCAGAAATGATTTGGA+AGG | - | Chr3:92413040-92413059 | None:intergenic | 40.0% |
| ! | TGCTGTTAGCTTGAAACCTT+GGG | - | Chr3:92412054-92412073 | None:intergenic | 40.0% |
| ! | TTAAAGCATCCCCATCAACA+AGG | - | Chr3:92413190-92413209 | None:intergenic | 40.0% |
| !! | GTGGTGGATATGATAAGTAC+AGG | + | Chr3:92410634-92410653 | MsG0380017128.01.T01:CDS | 40.0% |
| !! | TCGCACCTATTTTAAGTCCA+TGG | + | Chr3:92412361-92412380 | MsG0380017128.01.T01:intron | 40.0% |
| !!! | AAGGTGAGGGTTTTGAAATG+GGG | - | Chr3:92410304-92410323 | None:intergenic | 40.0% |
| !!! | GAAGGTGAGGGTTTTGAAAT+GGG | - | Chr3:92410305-92410324 | None:intergenic | 40.0% |
| ACGCACAGTTGCTTGCTTAT+CGG | + | Chr3:92411764-92411783 | MsG0380017128.01.T01:intron | 45.0% | |
| ACTACACAGAGCTGAGAACT+TGG | + | Chr3:92410133-92410152 | MsG0380017128.01.T01:five_prime_UTR | 45.0% | |
| ATCCACCAGTGACATGAGAT+TGG | - | Chr3:92410776-92410795 | None:intergenic | 45.0% | |
| ATCTCACCGTTCATTTGTGG+GGG | + | Chr3:92411935-92411954 | MsG0380017128.01.T01:intron | 45.0% | |
| ATGAAAACCGAGACCTTGAG+AGG | + | Chr3:92412021-92412040 | MsG0380017128.01.T01:intron | 45.0% | |
| ATGCTCCAATCTCATGTCAC+TGG | + | Chr3:92410768-92410787 | MsG0380017128.01.T01:CDS | 45.0% | |
| ATTGGACCCCTCGAATTAGT+CGG | - | Chr3:92411917-92411936 | None:intergenic | 45.0% | |
| CACAAAACAGGACTTAGTGC+TGG | + | Chr3:92413137-92413156 | MsG0380017128.01.T01:CDS | 45.0% | |
| CCAATCTCACCGTTCATTTG+TGG | + | Chr3:92411932-92411951 | MsG0380017128.01.T01:intron | 45.0% | |
| CCACAAATGAACGGTGAGAT+TGG | - | Chr3:92411935-92411954 | None:intergenic | 45.0% | |
| CGAAGCTAGAATGGAAGCAA+TGG | + | Chr3:92410686-92410705 | MsG0380017128.01.T01:CDS | 45.0% | |
| CGCTCCATAGAGAGTAGTAT+AGG | - | Chr3:92411457-92411476 | None:intergenic | 45.0% | |
| GCCTTCCAAATCATTTCTGC+AGG | + | Chr3:92413036-92413055 | MsG0380017128.01.T01:CDS | 45.0% | |
| GGGGACTTGAAAGATTGTAG+CGG | - | Chr3:92411237-92411256 | None:intergenic | 45.0% | |
| GTAAACAGGAGCAGGCATAT+TGG | - | Chr3:92410387-92410406 | None:intergenic | 45.0% | |
| GTACAGGGATTATTCGAAGC+GGG | + | Chr3:92410650-92410669 | MsG0380017128.01.T01:CDS | 45.0% | |
| GTGAAGTGATTGAGAGAGCT+TGG | - | Chr3:92410270-92410289 | None:intergenic | 45.0% | |
| GTGTGAGCTATCAACTCACA+AGG | - | Chr3:92412397-92412416 | None:intergenic | 45.0% | |
| GTGTGTGTGTGTTGGAAACT+CGG | + | Chr3:92411876-92411895 | MsG0380017128.01.T01:intron | 45.0% | |
| TGTGTTGGAAACTCGGTATC+TGG | + | Chr3:92411883-92411902 | MsG0380017128.01.T01:intron | 45.0% | |
| TTTGGCATGCCTCAACAACA+GGG | + | Chr3:92413014-92413033 | MsG0380017128.01.T01:intron | 45.0% | |
| ! | AAACAGGACTTAGTGCTGGA+TGG | + | Chr3:92413141-92413160 | MsG0380017128.01.T01:CDS | 45.0% |
| ! | CCACCAAAATTGGCATTGGA+GGG | + | Chr3:92411997-92412016 | MsG0380017128.01.T01:intron | 45.0% |
| ! | CTCGTTGTTGTTCGAAGATC+CGG | + | Chr3:92410353-92410372 | MsG0380017128.01.T01:CDS | 45.0% |
| ! | GAGTGTGTTACTGTTGAGTG+AGG | - | Chr3:92412554-92412573 | None:intergenic | 45.0% |
| ! | GCTGTTAGCTTGAAACCTTG+GGG | - | Chr3:92412053-92412072 | None:intergenic | 45.0% |
| ! | GTGCTGTTAGCTTGAAACCT+TGG | - | Chr3:92412055-92412074 | None:intergenic | 45.0% |
| ! | TTTTGGCATGCCTCAACAAC+AGG | + | Chr3:92413013-92413032 | MsG0380017128.01.T01:intron | 45.0% |
| !! | AATTACAACTTGGGTTGGCC+TGG | - | Chr3:92412077-92412096 | None:intergenic | 45.0% |
| !! | CACAAGGAAGAGCATTTCCA+TGG | - | Chr3:92412381-92412400 | None:intergenic | 45.0% |
| !! | CCTCCAATGCCAATTTTGGT+GGG | - | Chr3:92411999-92412018 | None:intergenic | 45.0% |
| !! | GGTGAATGTGGATTAGGGTT+TGG | - | Chr3:92410425-92410444 | None:intergenic | 45.0% |
| !! | TGCTTCCATTCTAGCTTCGT+CGG | - | Chr3:92410685-92410704 | None:intergenic | 45.0% |
| !!! | AGGTGAGGGTTTTGAAATGG+GGG | - | Chr3:92410303-92410322 | None:intergenic | 45.0% |
| !!! | GGAAGGTGAGGGTTTTGAAA+TGG | - | Chr3:92410306-92410325 | None:intergenic | 45.0% |
| ACACACACACACACACACAC+GGG | + | Chr3:92412609-92412628 | MsG0380017128.01.T01:intron | 50.0% | |
| AGAGAGTCGCCGGAAAAGAA+TGG | + | Chr3:92410208-92410227 | MsG0380017128.01.T01:CDS | 50.0% | |
| ATGAGGCCCCCACAAATGAA+CGG | - | Chr3:92411944-92411963 | None:intergenic | 50.0% | |
| CAAGGACCGACTAATTCGAG+GGG | + | Chr3:92411908-92411927 | MsG0380017128.01.T01:intron | 50.0% | |
| CACACACACACACACACACA+CGG | + | Chr3:92412608-92412627 | MsG0380017128.01.T01:intron | 50.0% | |
| CATCATACGAAGAGAGTCGC+CGG | + | Chr3:92410198-92410217 | MsG0380017128.01.T01:CDS | 50.0% | |
| CCAAGGACCGACTAATTCGA+GGG | + | Chr3:92411907-92411926 | MsG0380017128.01.T01:intron | 50.0% | |
| CCTCGAATTAGTCGGTCCTT+GGG | - | Chr3:92411909-92411928 | None:intergenic | 50.0% | |
| CTCCAATCTCATGTCACTGG+TGG | + | Chr3:92410771-92410790 | MsG0380017128.01.T01:CDS | 50.0% | |
| GGTTTCAAGCTAACAGCACC+AGG | + | Chr3:92412056-92412075 | MsG0380017128.01.T01:intron | 50.0% | |
| TTTGGAAGGCCCTGTTGTTG+AGG | - | Chr3:92413026-92413045 | None:intergenic | 50.0% | |
| ! | CCCACCAAAATTGGCATTGG+AGG | + | Chr3:92411996-92412015 | MsG0380017128.01.T01:intron | 50.0% |
| ! | CCCTCCAATGCCAATTTTGG+TGG | - | Chr3:92412000-92412019 | None:intergenic | 50.0% |
| ! | GTCATCACTTCGTCCCGTTT+TGG | - | Chr3:92413071-92413090 | None:intergenic | 50.0% |
| ! | TCTTTCTTGATAGGGGTGCG+AGG | - | Chr3:92410332-92410351 | None:intergenic | 50.0% |
| !! | CTCATGTCACTGGTGGATTC+TGG | + | Chr3:92410778-92410797 | MsG0380017128.01.T01:CDS | 50.0% |
| !! | TCACTTCGTCCCGTTTTGGA+AGG | - | Chr3:92413067-92413086 | None:intergenic | 50.0% |
| !! | TTTTCTGGTGGAAGGGGAGA+GGG | - | Chr3:92411400-92411419 | None:intergenic | 50.0% |
| !! | TTTTTCTGGTGGAAGGGGAG+AGG | - | Chr3:92411401-92411420 | None:intergenic | 50.0% |
| ACACACACACACACACGGGT+TGG | + | Chr3:92412615-92412634 | MsG0380017128.01.T01:intron | 55.0% | |
| AGGCATATTGGCGACACGAC+CGG | - | Chr3:92410375-92410394 | None:intergenic | 55.0% | |
| CCCAAGGACCGACTAATTCG+AGG | + | Chr3:92411906-92411925 | MsG0380017128.01.T01:intron | 55.0% | |
| CCCTCGAATTAGTCGGTCCT+TGG | - | Chr3:92411910-92411929 | None:intergenic | 55.0% | |
| GAAACTCGGTATCTGGCCCA+AGG | + | Chr3:92411890-92411909 | MsG0380017128.01.T01:intron | 55.0% | |
| GTGCGAGGTTTGGAAGGTGA+GGG | - | Chr3:92410317-92410336 | None:intergenic | 55.0% | |
| GTGTGCTCCTCTCAAGGTCT+CGG | - | Chr3:92412031-92412050 | None:intergenic | 55.0% | |
| TGCGTCCGACGAAGCTAGAA+TGG | + | Chr3:92410677-92410696 | MsG0380017128.01.T01:CDS | 55.0% | |
| ! | ATAGGGGTGCGAGGTTTGGA+AGG | - | Chr3:92410323-92410342 | None:intergenic | 55.0% |
| ! | CTTGATAGGGGTGCGAGGTT+TGG | - | Chr3:92410327-92410346 | None:intergenic | 55.0% |
| ! | GGACTTAGTGCTGGATGGAG+AGG | + | Chr3:92413146-92413165 | MsG0380017128.01.T01:CDS | 55.0% |
| ! | TTTCTGGTGGAAGGGGAGAG+GGG | - | Chr3:92411399-92411418 | None:intergenic | 55.0% |
| !! | TGTCACTGGTGGATTCTGGC+TGG | + | Chr3:92410782-92410801 | MsG0380017128.01.T01:CDS | 55.0% |
| CTTGGGGTGTGCTCCTCTCA+AGG | - | Chr3:92412037-92412056 | None:intergenic | 60.0% | |
| GGTGCGAGGTTTGGAAGGTG+AGG | - | Chr3:92410318-92410337 | None:intergenic | 60.0% | |
| ! | CTTGAGAGGAGCACACCCCA+AGG | + | Chr3:92412035-92412054 | MsG0380017128.01.T01:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 92410078 | 92413256 | 92410078 | ID=MsG0380017128.01;Name=MsG0380017128.01 |
| Chr3 | mRNA | 92410078 | 92413256 | 92410078 | ID=MsG0380017128.01.T01;Parent=MsG0380017128.01;Name=MsG0380017128.01.T01;_AED=0.46;_eAED=0.47;_QI=104|1|0.75|1|1|1|4|0|222 |
| Chr3 | exon | 92410078 | 92410412 | 92410078 | ID=MsG0380017128.01.T01:exon:5275;Parent=MsG0380017128.01.T01 |
| Chr3 | exon | 92410500 | 92410543 | 92410500 | ID=MsG0380017128.01.T01:exon:5276;Parent=MsG0380017128.01.T01 |
| Chr3 | exon | 92410632 | 92410803 | 92410632 | ID=MsG0380017128.01.T01:exon:5277;Parent=MsG0380017128.01.T01 |
| Chr3 | exon | 92413035 | 92413256 | 92413035 | ID=MsG0380017128.01.T01:exon:5278;Parent=MsG0380017128.01.T01 |
| Chr3 | five_prime_UTR | 92410078 | 92410181 | 92410078 | ID=MsG0380017128.01.T01:five_prime_utr;Parent=MsG0380017128.01.T01 |
| Chr3 | CDS | 92410182 | 92410412 | 92410182 | ID=MsG0380017128.01.T01:cds;Parent=MsG0380017128.01.T01 |
| Chr3 | CDS | 92410500 | 92410543 | 92410500 | ID=MsG0380017128.01.T01:cds;Parent=MsG0380017128.01.T01 |
| Chr3 | CDS | 92410632 | 92410803 | 92410632 | ID=MsG0380017128.01.T01:cds;Parent=MsG0380017128.01.T01 |
| Chr3 | CDS | 92413035 | 92413256 | 92413035 | ID=MsG0380017128.01.T01:cds;Parent=MsG0380017128.01.T01 |
| Gene Sequence |
| Protein sequence |
