AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580026172.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580026172.01.T01 MTR_1g022380 73.031 508 134 2 1 507 496 1001 0.0 720
MsG0580026172.01.T01 MTR_1g023600 71.961 510 136 3 1 507 498 1003 0.0 688
MsG0580026172.01.T01 MTR_7g071940 60.118 509 197 4 1 507 495 999 0.0 569
MsG0580026172.01.T01 MTR_5g071220 59.528 509 201 4 1 506 501 1007 0.0 560
MsG0580026172.01.T01 MTR_5g071220 59.528 509 201 4 1 506 501 1007 0.0 559
MsG0580026172.01.T01 MTR_5g070960 58.858 508 206 3 1 506 502 1008 0.0 545
MsG0580026172.01.T01 MTR_5g040900 62.795 508 96 10 1 507 460 875 0.0 544
MsG0580026172.01.T01 MTR_5g072340 57.171 509 188 5 1 507 502 982 7.17e-177 524
MsG0580026172.01.T01 MTR_4g055630 54.291 536 215 6 1 507 501 1035 2.82e-172 514
MsG0580026172.01.T01 MTR_5g071310 56.890 508 188 5 1 506 468 946 1.63e-171 517
MsG0580026172.01.T01 MTR_5g071800 57.367 509 207 6 3 507 502 1004 1.04e-170 509
MsG0580026172.01.T01 MTR_5g071470 56.189 509 193 5 1 507 500 980 2.20e-170 507
MsG0580026172.01.T01 MTR_5g072140 56.790 486 201 5 1 483 461 940 2.11e-169 503
MsG0580026172.01.T01 MTR_5g071670 56.385 509 190 6 1 507 495 973 5.54e-168 510
MsG0580026172.01.T01 MTR_5g071670 52.121 165 76 3 164 326 1130 1293 5.48e-38 149
MsG0580026172.01.T01 MTR_5g070490 55.750 513 185 7 1 507 501 977 5.24e-164 494
MsG0580026172.01.T01 MTR_5g071823 54.706 510 221 7 1 506 501 1004 3.90e-163 489
MsG0580026172.01.T01 MTR_5g071850 54.706 510 221 7 1 506 501 1004 3.90e-163 489
MsG0580026172.01.T01 MTR_5g071780 54.813 509 223 6 1 507 501 1004 1.25e-162 488
MsG0580026172.01.T01 MTR_5g071570 57.848 446 184 3 1 444 502 945 3.81e-153 466
MsG0580026172.01.T01 MTR_5g070470 54.420 509 204 6 1 506 501 984 7.03e-151 464
MsG0580026172.01.T01 MTR_4g126000 54.545 473 208 6 37 507 401 868 4.30e-145 439
MsG0580026172.01.T01 MTR_5g072250 59.836 366 142 4 1 364 500 862 1.62e-124 385
MsG0580026172.01.T01 MTR_6g052760 43.086 499 252 11 1 488 496 973 3.01e-94 310
MsG0580026172.01.T01 MTR_6g052455 43.888 499 246 13 1 488 387 862 4.06e-91 300
MsG0580026172.01.T01 MTR_3g086070 41.667 492 263 11 4 488 498 972 1.13e-90 300
MsG0580026172.01.T01 MTR_0230s0010 41.082 499 262 10 1 488 437 914 9.99e-90 296
MsG0580026172.01.T01 MTR_8g036195 42.394 493 263 11 4 488 481 960 1.15e-89 297
MsG0580026172.01.T01 MTR_8g036195 30.986 213 127 8 306 507 869 1072 1.64e-11 67.4
MsG0580026172.01.T01 MTR_6g046480 41.365 498 250 12 1 488 494 959 8.38e-87 290
MsG0580026172.01.T01 MTR_0256s0050 40.562 498 259 13 4 488 469 942 2.33e-85 286
MsG0580026172.01.T01 MTR_6g047450 40.041 492 277 10 4 488 497 977 1.71e-84 283
MsG0580026172.01.T01 MTR_3g023320 41.429 490 266 12 4 485 499 975 8.14e-84 281
MsG0580026172.01.T01 MTR_6g046620 39.880 499 251 13 1 488 450 910 1.84e-81 274
MsG0580026172.01.T01 MTR_6g046130 40.882 499 238 13 6 488 498 955 8.56e-80 270
MsG0580026172.01.T01 MTR_0511s0020 40.079 509 256 14 1 488 496 976 4.17e-79 268
MsG0580026172.01.T01 MTR_0133s0030 38.755 498 267 13 4 488 498 970 2.00e-78 266
MsG0580026172.01.T01 MTR_0133s0020 38.353 498 265 12 9 488 501 974 4.81e-78 266
MsG0580026172.01.T01 MTR_6g046570 39.877 489 255 10 7 491 506 959 1.23e-77 264
MsG0580026172.01.T01 MTR_6g046930 37.172 495 280 9 6 488 497 972 2.15e-76 261
MsG0580026172.01.T01 MTR_5g039570 48.464 293 115 4 22 312 323 581 1.07e-72 242
MsG0580026172.01.T01 MTR_0144s0060 37.097 496 235 12 6 485 498 932 3.46e-70 243
MsG0580026172.01.T01 MTR_0144s0060 52.597 154 69 3 62 212 992 1144 6.36e-31 128
MsG0580026172.01.T01 MTR_6g046440 40.806 397 211 9 104 491 538 919 1.91e-68 238
MsG0580026172.01.T01 MTR_6g046450 33.556 599 258 18 6 516 549 1095 6.50e-64 226
MsG0580026172.01.T01 MTR_5g035240 40.000 400 226 11 75 465 576 970 1.40e-62 221
MsG0580026172.01.T01 MTR_3g026660 33.737 578 289 19 23 512 563 1134 1.47e-62 222
MsG0580026172.01.T01 MTR_3g026660 33.737 578 289 19 23 512 506 1077 1.83e-62 221
MsG0580026172.01.T01 MTR_5g035280 34.007 594 289 20 2 507 507 1085 2.47e-62 221
MsG0580026172.01.T01 MTR_5g037450 32.285 604 299 21 2 512 511 1097 1.35e-60 216
MsG0580026172.01.T01 MTR_5g040770 34.942 518 280 17 38 512 309 812 2.74e-60 213
MsG0580026172.01.T01 MTR_5g035480 35.317 521 267 16 17 506 511 992 2.64e-56 203
MsG0580026172.01.T01 MTR_5g035530 32.892 529 264 15 62 507 448 968 5.72e-56 202
MsG0580026172.01.T01 MTR_5g035200 37.978 366 207 11 158 512 1 357 2.44e-55 190
MsG0580026172.01.T01 MTR_5g037500 35.892 482 266 15 62 507 501 975 9.11e-52 190
MsG0580026172.01.T01 MTR_6g046750 35.015 337 191 7 157 488 4 317 2.05e-48 174
MsG0580026172.01.T01 MTR_5g028610 30.396 556 299 22 33 507 520 1068 1.04e-47 178
MsG0580026172.01.T01 MTR_0144s0010 38.889 324 158 6 166 488 2 286 5.57e-47 169
MsG0580026172.01.T01 MTR_3g022790 31.285 537 308 18 1 493 504 1023 1.71e-45 172
MsG0580026172.01.T01 MTR_3g030980 32.773 476 262 19 57 481 571 1039 1.96e-43 166
MsG0580026172.01.T01 MTR_3g032800 29.228 544 318 20 10 495 517 1051 8.08e-43 164
MsG0580026172.01.T01 MTR_3g032960 30.849 483 279 17 55 487 569 1046 1.20e-42 163
MsG0580026172.01.T01 MTR_3g435720 29.815 540 313 19 10 492 517 1047 1.52e-42 163
MsG0580026172.01.T01 MTR_3g030960 30.992 484 258 17 57 470 571 1048 2.18e-42 162
MsG0580026172.01.T01 MTR_0425s0020 31.679 524 293 20 3 488 513 1009 2.87e-42 162
MsG0580026172.01.T01 MTR_3g034460 31.417 487 280 16 43 480 541 1022 3.10e-42 162
MsG0580026172.01.T01 MTR_3g032370 29.961 514 299 19 32 492 541 1046 5.72e-42 161
MsG0580026172.01.T01 MTR_3g023030 33.196 485 254 18 64 503 581 1040 7.03e-42 161
MsG0580026172.01.T01 MTR_3g023030 33.196 485 254 18 64 503 547 1006 8.55e-42 160
MsG0580026172.01.T01 MTR_6g046760 36.628 344 193 11 157 488 4 334 1.52e-41 155
MsG0580026172.01.T01 MTR_3g035480 29.963 544 307 19 10 492 517 1047 3.36e-41 159
MsG0580026172.01.T01 MTR_3g022600 31.758 529 295 20 3 488 513 1018 3.67e-41 159
MsG0580026172.01.T01 MTR_0002s0110 29.963 544 307 19 10 492 517 1047 4.26e-41 159
MsG0580026172.01.T01 MTR_2g063777 31.211 487 278 17 55 492 566 1044 4.30e-41 159
MsG0580026172.01.T01 MTR_5g037460 29.423 520 253 16 5 507 371 793 6.73e-41 157
MsG0580026172.01.T01 MTR_3g036050 31.094 521 304 21 6 488 126 629 8.04e-41 157
MsG0580026172.01.T01 MTR_3g033240 30.930 430 254 15 55 450 572 992 1.21e-40 157
MsG0580026172.01.T01 MTR_3g035940 29.779 544 308 18 10 492 517 1047 1.63e-40 157
MsG0580026172.01.T01 MTR_0002s0120 29.795 537 306 18 10 485 300 826 1.72e-40 156
MsG0580026172.01.T01 MTR_2g078070 29.333 525 295 18 54 507 561 1080 1.93e-40 156
MsG0580026172.01.T01 MTR_5g028340 29.049 568 305 19 33 507 510 1072 3.04e-40 156
MsG0580026172.01.T01 MTR_3g435740 28.355 529 316 17 10 481 561 1083 3.15e-40 156
MsG0580026172.01.T01 MTR_3g032340 31.613 465 269 13 77 498 647 1105 3.91e-40 155
MsG0580026172.01.T01 MTR_1g008240 31.181 542 295 22 11 492 504 1027 4.05e-40 155
MsG0580026172.01.T01 MTR_3g032500 30.977 481 277 17 57 487 575 1050 5.53e-40 155
MsG0580026172.01.T01 MTR_3g032110 31.398 465 270 13 77 498 644 1102 1.64e-39 154
MsG0580026172.01.T01 MTR_3g033380 29.730 518 296 16 10 467 521 1030 2.07e-39 154
MsG0580026172.01.T01 MTR_5g028750 28.687 617 331 21 4 514 460 1073 3.06e-39 153
MsG0580026172.01.T01 MTR_3g022060 32.988 482 246 18 70 486 470 939 4.21e-39 152
MsG0580026172.01.T01 MTR_3g032760 30.223 493 274 18 55 492 569 1046 4.25e-39 152
MsG0580026172.01.T01 MTR_8g030860 30.095 525 307 19 10 480 524 1042 1.48e-38 151
MsG0580026172.01.T01 MTR_0002s0090 29.963 544 304 20 10 491 517 1045 1.90e-38 150
MsG0580026172.01.T01 MTR_3g035500 29.963 544 304 20 10 491 517 1045 1.90e-38 150
MsG0580026172.01.T01 MTR_3g032200 30.185 487 283 19 55 492 572 1050 1.96e-38 150
MsG0580026172.01.T01 MTR_3g021100 30.109 548 312 17 3 497 504 1033 2.08e-38 150
MsG0580026172.01.T01 MTR_3g033860 31.481 486 279 15 55 492 569 1048 2.13e-38 150
MsG0580026172.01.T01 MTR_3g035960 29.562 548 306 19 10 491 517 1050 2.71e-38 150
MsG0580026172.01.T01 MTR_8g446950 31.498 454 285 16 57 492 595 1040 7.37e-38 149
MsG0580026172.01.T01 MTR_3g034430 29.834 543 278 16 55 499 569 1106 7.48e-38 149
MsG0580026172.01.T01 MTR_3g031940 28.484 488 292 16 55 491 572 1053 8.35e-38 149
MsG0580026172.01.T01 MTR_7g078790 36.420 324 187 10 77 386 583 901 9.19e-38 148
MsG0580026172.01.T01 MTR_3g014080 32.950 522 273 25 33 492 541 1047 9.53e-38 149
MsG0580026172.01.T01 MTR_3g022130 30.636 519 296 16 1 473 489 989 9.67e-38 148
MsG0580026172.01.T01 MTR_3g014080 32.950 522 273 25 33 492 541 1047 9.85e-38 149
MsG0580026172.01.T01 MTR_5g028420 28.816 583 307 20 33 511 505 1083 1.75e-37 147
MsG0580026172.01.T01 MTR_3g034380 31.028 506 289 17 39 491 548 1046 2.90e-37 147
MsG0580026172.01.T01 MTR_3g032150 29.012 486 288 17 32 492 541 994 2.96e-37 147
MsG0580026172.01.T01 MTR_0137s0070 33.553 456 247 20 79 492 24 465 3.49e-37 145
MsG0580026172.01.T01 MTR_3g024460 28.846 520 306 17 1 473 114 616 3.93e-37 146
MsG0580026172.01.T01 MTR_0137s0070 33.553 456 247 20 79 492 24 465 4.41e-37 145
MsG0580026172.01.T01 MTR_5g013650 41.079 241 69 6 260 499 54 222 5.31e-37 136
MsG0580026172.01.T01 MTR_3g027420 32.018 456 246 16 83 485 592 1036 9.53e-37 145
MsG0580026172.01.T01 MTR_3g028040 30.595 487 280 15 55 491 569 1047 1.58e-36 145
MsG0580026172.01.T01 MTR_3g022570 33.925 451 258 17 70 488 612 1054 2.06e-36 144
MsG0580026172.01.T01 MTR_1g047800 31.286 521 317 16 3 491 504 1015 2.81e-36 144
MsG0580026172.01.T01 MTR_3g022300 37.107 318 177 9 64 370 591 896 3.65e-36 144
MsG0580026172.01.T01 MTR_3g033080 34.627 335 196 10 55 370 572 902 5.26e-36 143
MsG0580026172.01.T01 MTR_3g021380 29.705 542 310 17 3 491 486 1009 6.85e-36 143
MsG0580026172.01.T01 MTR_3g027250 30.710 521 297 18 1 473 495 999 8.76e-36 142
MsG0580026172.01.T01 MTR_0083s0120 30.323 465 268 17 55 495 118 550 9.73e-36 142
MsG0580026172.01.T01 MTR_6g016430 32.302 517 297 20 36 511 537 1041 1.09e-35 142
MsG0580026172.01.T01 MTR_2g014840 34.332 367 227 7 2 354 507 873 1.55e-35 142
MsG0580026172.01.T01 MTR_3g018930 31.285 537 297 22 1 498 512 1015 1.71e-35 142
MsG0580026172.01.T01 MTR_3g022400 30.180 444 257 11 83 488 585 1013 3.28e-35 141
MsG0580026172.01.T01 MTR_8g038590 31.871 433 262 16 77 492 607 1023 4.98e-35 140
MsG0580026172.01.T01 MTR_8g038590 31.000 200 105 8 314 506 1057 1230 6.92e-11 65.5
MsG0580026172.01.T01 MTR_3g071070 29.399 449 282 10 71 491 369 810 6.82e-35 140
MsG0580026172.01.T01 MTR_4g050410 28.908 467 266 15 77 492 594 1045 8.69e-35 140
MsG0580026172.01.T01 MTR_3g025360 31.990 397 227 12 83 450 617 999 1.21e-34 139
MsG0580026172.01.T01 MTR_3g020890 34.031 382 227 13 9 369 509 886 1.22e-34 139
MsG0580026172.01.T01 MTR_3g022230 30.582 533 305 17 1 493 516 1023 2.28e-34 139
MsG0580026172.01.T01 MTR_3g071130 29.399 449 282 10 71 491 574 1015 2.44e-34 138
MsG0580026172.01.T01 MTR_3g022940 30.309 551 314 21 3 503 496 1026 2.45e-34 138
MsG0580026172.01.T01 MTR_3g021400 31.034 551 311 22 3 503 488 1019 3.25e-34 138
MsG0580026172.01.T01 MTR_3g035810 32.048 415 237 12 64 446 549 950 3.81e-34 137
MsG0580026172.01.T01 MTR_3g015260 30.465 430 229 12 83 471 605 1005 4.10e-34 137
MsG0580026172.01.T01 MTR_3g021170 30.112 538 311 22 3 491 499 1020 4.18e-34 137
MsG0580026172.01.T01 MTR_3g022870 32.346 439 254 15 83 488 588 1016 5.30e-34 137
MsG0580026172.01.T01 MTR_7g021000 28.843 527 288 16 64 508 576 1097 5.47e-34 137
MsG0580026172.01.T01 MTR_6g016420 32.128 470 282 16 75 516 562 1022 6.37e-34 137
MsG0580026172.01.T01 MTR_3g018980 31.409 433 254 13 83 488 604 1020 6.68e-34 137
MsG0580026172.01.T01 MTR_3g015260 30.924 498 233 20 83 498 605 1073 7.75e-34 137
MsG0580026172.01.T01 MTR_3g022400 30.000 440 255 12 83 485 585 1008 2.26e-33 135
MsG0580026172.01.T01 MTR_3g022740 34.448 299 165 6 75 369 316 587 3.18e-33 134
MsG0580026172.01.T01 MTR_5g028290 28.466 541 288 16 61 507 576 1111 3.67e-33 135
MsG0580026172.01.T01 MTR_3g021340 32.035 462 265 17 64 491 567 1013 5.66e-33 134
MsG0580026172.01.T01 MTR_3g014390 34.501 371 217 15 62 421 579 934 5.68e-33 134
MsG0580026172.01.T01 MTR_5g028070 28.876 516 275 15 82 507 715 1228 7.06e-33 134
MsG0580026172.01.T01 MTR_3g033110 28.067 538 305 20 10 492 516 1026 1.11e-32 133
MsG0580026172.01.T01 MTR_3g019040 31.279 438 239 16 83 480 604 1019 1.50e-32 133
MsG0580026172.01.T01 MTR_3g014040 32.522 452 259 15 77 492 589 1030 1.81e-32 132
MsG0580026172.01.T01 MTR_7g021000 36.900 271 159 6 64 325 576 843 5.94e-32 130
MsG0580026172.01.T01 MTR_0005s0200 27.866 506 308 15 33 489 558 1055 6.20e-32 131
MsG0580026172.01.T01 MTR_5g037590 28.088 502 248 15 56 488 531 988 8.27e-32 130
MsG0580026172.01.T01 MTR_0603s0010 30.021 473 274 13 57 501 632 1075 9.11e-32 130
MsG0580026172.01.T01 MTR_3g027200 35.452 299 178 7 83 369 603 898 1.04e-31 130
MsG0580026172.01.T01 MTR_1g037610 32.877 438 244 16 77 488 599 1012 1.24e-31 130
MsG0580026172.01.T01 MTR_0137s0010 32.080 452 261 15 77 492 143 584 2.53e-31 129
MsG0580026172.01.T01 MTR_3g014320 32.407 432 243 16 77 488 598 1000 2.97e-31 129
MsG0580026172.01.T01 MTR_3g019000 30.435 437 256 13 85 488 604 1025 6.38e-31 128
MsG0580026172.01.T01 MTR_5g095910 29.159 559 315 17 9 492 517 1069 6.81e-31 128
MsG0580026172.01.T01 MTR_3g014360 32.319 427 230 16 77 488 583 965 9.36e-31 127
MsG0580026172.01.T01 MTR_6g016420 30.973 452 267 15 75 513 562 981 9.53e-31 127
MsG0580026172.01.T01 MTR_3g018980 36.333 300 162 9 83 371 604 885 1.56e-30 127
MsG0580026172.01.T01 MTR_8g106550 29.038 520 298 21 10 487 449 939 3.54e-30 125
MsG0580026172.01.T01 MTR_3g021330 30.501 459 270 18 64 506 162 587 3.91e-30 124
MsG0580026172.01.T01 MTR_3g018970 31.557 469 272 17 83 513 57 514 8.96e-30 122
MsG0580026172.01.T01 MTR_6g084550 31.351 370 219 10 10 353 503 863 1.34e-29 124
MsG0580026172.01.T01 MTR_3g020620 31.626 449 280 13 57 492 720 1154 2.29e-29 123
MsG0580026172.01.T01 MTR_3g027470 31.667 420 236 16 83 485 510 895 7.31e-29 121
MsG0580026172.01.T01 MTR_3g070590 26.862 443 259 8 71 491 574 973 7.62e-29 121
MsG0580026172.01.T01 MTR_4g021690 28.517 526 309 23 2 491 502 996 1.14e-28 121
MsG0580026172.01.T01 MTR_3g022920 34.337 332 197 11 83 401 581 904 1.78e-28 120
MsG0580026172.01.T01 MTR_4g019360 30.607 428 266 12 77 492 519 927 2.23e-28 120
MsG0580026172.01.T01 MTR_8g038570 33.687 377 216 11 3 353 522 890 3.17e-28 120
MsG0580026172.01.T01 MTR_3g011620 30.886 463 283 15 57 501 576 1019 2.46e-27 117
MsG0580026172.01.T01 MTR_2g038930 29.646 452 257 14 77 473 440 885 4.06e-27 116
MsG0580026172.01.T01 MTR_3g014510 31.264 435 219 19 77 493 599 971 5.30e-27 116
MsG0580026172.01.T01 MTR_1643s0010 38.009 221 124 5 143 359 1 212 8.25e-27 111
MsG0580026172.01.T01 MTR_2g038900 29.646 452 257 14 77 473 603 1048 1.02e-26 115
MsG0580026172.01.T01 MTR_3g022240 36.364 231 130 7 147 370 1 221 1.07e-26 112
MsG0580026172.01.T01 MTR_4g022540 28.161 522 314 20 2 491 501 993 1.09e-26 115
MsG0580026172.01.T01 MTR_5g034770 30.469 384 232 14 2 371 491 853 1.11e-26 115
MsG0580026172.01.T01 MTR_5g034770 35.135 148 72 2 391 514 730 877 2.53e-11 67.0
MsG0580026172.01.T01 MTR_2g038760 29.425 452 258 13 77 473 614 1059 5.48e-26 113
MsG0580026172.01.T01 MTR_3g033130 26.679 521 269 19 10 467 502 972 1.71e-25 111
MsG0580026172.01.T01 MTR_1g045960 30.022 453 272 15 77 492 567 1011 2.16e-25 111
MsG0580026172.01.T01 MTR_2g039090 30.462 325 190 7 79 371 589 909 3.13e-25 110
MsG0580026172.01.T01 MTR_4g022460 27.826 460 280 14 56 491 566 997 4.68e-25 110
MsG0580026172.01.T01 MTR_3g034650 27.252 433 236 13 77 471 143 534 6.92e-25 109
MsG0580026172.01.T01 MTR_3g435220 29.645 479 288 14 57 492 530 1002 6.99e-25 109
MsG0580026172.01.T01 MTR_3g022870 30.562 445 254 17 89 488 546 980 9.55e-25 109
MsG0580026172.01.T01 MTR_6g046750 27.021 433 182 13 157 507 4 384 1.98e-24 105
MsG0580026172.01.T01 MTR_5g070120 43.827 162 55 4 295 456 3 128 4.75e-24 97.8
MsG0580026172.01.T01 MTR_3g014470 33.564 289 160 8 77 362 549 808 5.96e-24 106
MsG0580026172.01.T01 MTR_4g037045 61.250 80 31 0 155 234 98 177 7.16e-24 99.8
MsG0580026172.01.T01 MTR_3g007190 26.340 429 248 13 103 492 497 896 7.42e-24 106
MsG0580026172.01.T01 MTR_2g014720 27.132 516 297 19 11 492 423 893 1.58e-23 105
MsG0580026172.01.T01 MTR_4g022480 28.205 468 290 20 46 491 553 996 2.15e-22 102
MsG0580026172.01.T01 MTR_4g022560 27.079 469 274 15 56 491 566 999 3.61e-22 101
MsG0580026172.01.T01 MTR_3g018930 38.764 178 105 4 83 257 606 782 5.56e-22 100
MsG0580026172.01.T01 MTR_0267s0070 32.033 359 216 12 57 388 579 936 7.27e-22 100
MsG0580026172.01.T01 MTR_2g014730 28.107 523 307 18 9 492 479 971 4.78e-21 97.8
MsG0580026172.01.T01 MTR_3g463180 46.667 120 61 2 20 138 358 475 9.15e-21 95.5
MsG0580026172.01.T01 MTR_6g046550 34.632 231 130 4 263 491 326 537 2.57e-20 95.1
MsG0580026172.01.T01 MTR_3g435210 28.062 449 263 15 57 485 377 785 1.94e-19 92.8
MsG0580026172.01.T01 MTR_3g022590 30.402 398 184 17 120 486 14 349 9.70e-19 89.4
MsG0580026172.01.T01 MTR_8g011280 27.635 351 192 11 224 516 490 836 1.01e-17 87.0
MsG0580026172.01.T01 MTR_8g011850 26.205 477 256 16 97 517 1579 2015 2.21e-17 86.7
MsG0580026172.01.T01 MTR_8g037220 25.541 462 256 16 97 505 1305 1731 3.22e-17 85.9
MsG0580026172.01.T01 MTR_3g436130 34.161 161 96 5 133 289 18 172 4.46e-17 80.1
MsG0580026172.01.T01 MTR_8g037220 25.541 462 256 16 97 505 1526 1952 4.90e-17 85.5
MsG0580026172.01.T01 MTR_4g022960 25.442 452 243 13 75 486 540 937 8.11e-17 84.3
MsG0580026172.01.T01 MTR_3g015280 35.678 199 111 11 82 271 584 774 3.21e-16 82.4
MsG0580026172.01.T01 MTR_4g022950 26.168 428 235 14 96 491 11 389 3.48e-16 81.3
MsG0580026172.01.T01 MTR_8g011170 28.082 292 173 11 243 513 621 896 5.10e-16 81.6
MsG0580026172.01.T01 MTR_8g039260 27.542 472 263 18 74 506 137 568 3.43e-15 78.6
MsG0580026172.01.T01 MTR_1g030770 27.974 311 182 11 238 512 606 910 1.36e-14 77.4
MsG0580026172.01.T01 MTR_3g015560 31.933 238 135 10 82 296 583 816 4.66e-14 75.5
MsG0580026172.01.T01 MTR_2g060700 29.893 281 151 9 80 354 376 616 5.19e-14 75.1
MsG0580026172.01.T01 MTR_6g452490 25.413 484 250 21 71 507 537 956 8.11e-14 74.7
MsG0580026172.01.T01 MTR_8g010440 25.690 471 245 16 71 495 536 947 9.34e-14 74.7
MsG0580026172.01.T01 MTR_8g011590 27.494 411 233 16 124 506 449 822 1.12e-13 74.3
MsG0580026172.01.T01 MTR_5g035450 32.727 220 105 7 335 512 62 280 2.57e-12 69.3
MsG0580026172.01.T01 MTR_8g445980 29.617 287 174 11 5 271 513 791 2.90e-12 69.7
MsG0580026172.01.T01 MTR_3g086080 37.069 116 67 2 394 503 63 178 3.35e-12 67.0
MsG0580026172.01.T01 MTR_4g050790 31.128 257 128 11 65 284 547 791 5.12e-12 68.9
MsG0580026172.01.T01 MTR_8g011320 24.632 475 254 17 73 512 490 895 8.14e-12 68.6
MsG0580026172.01.T01 MTR_8g011180 27.302 315 173 12 243 515 634 934 8.95e-12 68.2
MsG0580026172.01.T01 MTR_1g078450 39.831 118 62 4 159 270 17 131 1.97e-11 65.1
MsG0580026172.01.T01 MTR_0534s0010 31.609 174 98 5 342 513 11 165 2.80e-11 62.8
MsG0580026172.01.T01 MTR_0511s0010 31.429 175 105 7 342 507 58 226 7.88e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580026172.01.T01 AT3G14470 32.589 448 269 14 51 468 567 1011 7.26e-41 158
MsG0580026172.01.T01 AT3G14470 32.589 448 269 14 51 468 567 1011 7.26e-41 158
MsG0580026172.01.T01 AT3G14460 32.071 396 238 13 3 369 506 899 2.38e-31 129
MsG0580026172.01.T01 AT1G58848 29.293 495 257 24 64 506 587 1040 8.40e-13 71.6
MsG0580026172.01.T01 AT1G59218 29.293 495 257 24 64 506 587 1040 8.40e-13 71.6
MsG0580026172.01.T01 AT1G59218 29.293 495 257 24 64 506 587 1040 8.40e-13 71.6
MsG0580026172.01.T01 AT1G59218 29.293 495 257 24 64 506 587 1040 8.40e-13 71.6
MsG0580026172.01.T01 AT1G58848 29.293 495 257 24 64 506 587 1040 8.40e-13 71.6

Find 104 sgRNAs with CRISPR-Local

Find 113 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTAATTCATTTGAGGTATT+TGG 0.183037 5:-31794585 MsG0580026172.01.T01:CDS
ACACGATCATCACTAATAAT+AGG 0.202777 5:+31794155 None:intergenic
AGTATTTAACAGAGAAAATA+TGG 0.203535 5:-31793494 MsG0580026172.01.T01:CDS
GTTGAAGAAGCAAATTTAAT+AGG 0.233895 5:-31794239 MsG0580026172.01.T01:CDS
ACCCGGAGAGTGTGCTTTAT+TGG 0.257769 5:+31794647 None:intergenic
TTTAGTTGCTCTTTCTGTTA+TGG 0.259868 5:-31794036 MsG0580026172.01.T01:CDS
CACGATCATCACTAATAATA+GGG 0.289262 5:+31794156 None:intergenic
GTTCAAGTTTATCACAATTT+CGG 0.289751 5:+31793781 None:intergenic
ACCACCCTTACCCTTTGTTT+TGG 0.300736 5:-31793672 MsG0580026172.01.T01:CDS
TTCAACAGTCCCTCTAAGTT+TGG 0.325115 5:+31793849 None:intergenic
TGTAAGCTATAAATAGAGTT+GGG 0.332766 5:+31794533 None:intergenic
TCTGCAATCACTTCAATCTA+TGG 0.357552 5:-31793466 MsG0580026172.01.T01:CDS
GACGATAAATTTCCCATCTC+TGG 0.358513 5:-31793895 MsG0580026172.01.T01:CDS
CAACCTAGCTTTGAAGCATC+TGG 0.362775 5:-31793541 MsG0580026172.01.T01:CDS
CTTCAAACTCTAAGAGTAGA+TGG 0.362934 5:-31793600 MsG0580026172.01.T01:CDS
AGGTTTCTAAACATCTCCTT+TGG 0.374158 5:+31793630 None:intergenic
TAGGAAATTAAAATGCTTGC+CGG 0.385408 5:-31793430 MsG0580026172.01.T01:CDS
AAATAATTTACCAAACTTAG+AGG 0.387019 5:-31793859 MsG0580026172.01.T01:CDS
GCTAGGTTGAAGGGTTCATT+TGG 0.389899 5:+31793555 None:intergenic
TCAACCTCACACAAATCTTA+AGG 0.396605 5:-31794120 MsG0580026172.01.T01:CDS
CCATGTGTCTGTGAAATACT+TGG 0.396941 5:-31793946 MsG0580026172.01.T01:CDS
CAACCTCACACAAATCTTAA+GGG 0.400686 5:-31794119 MsG0580026172.01.T01:CDS
TGCATCGTTTCTCCAATGTT+AGG 0.406177 5:+31793358 None:intergenic
CCAAGAGTTCTGATCCAACT+TGG 0.417213 5:+31794062 None:intergenic
TCTAAACTTAGGAGGAAAAC+TGG 0.418305 5:-31794300 MsG0580026172.01.T01:CDS
GTTAAAGACTTCCAACTACT+TGG 0.426849 5:-31793741 MsG0580026172.01.T01:CDS
ATGAGGGAACCGGAGAAGAC+TGG 0.432583 5:-31793335 MsG0580026172.01.T01:CDS
GGTTTCTAAACATCTCCTTT+GGG 0.438292 5:+31793631 None:intergenic
TATATTGTTATTCCAGAGAA+AGG 0.441441 5:-31794347 MsG0580026172.01.T01:CDS
AACCTTGGTGCCGCCATGAC+AGG 0.448615 5:+31794192 None:intergenic
TACCAATAAAGCACACTCTC+CGG 0.449621 5:-31794649 MsG0580026172.01.T01:CDS
ACTAAGCTATGTCCTTTCTC+TGG 0.452203 5:+31794335 None:intergenic
ACCAATAAAGCACACTCTCC+GGG 0.457742 5:-31794648 MsG0580026172.01.T01:CDS
TATCCAGATGCTTCAAAGCT+AGG 0.459840 5:+31793538 None:intergenic
CCAAGTTGGATCAGAACTCT+TGG 0.460359 5:-31794062 MsG0580026172.01.T01:CDS
CATAACCAAAACAAAGGGTA+AGG 0.462406 5:+31793667 None:intergenic
AAGGATTATGCTTCCCAAGT+TGG 0.463489 5:-31794076 MsG0580026172.01.T01:CDS
TATCTTGTCCCAGTCTTCTC+CGG 0.467723 5:+31793326 None:intergenic
TAGTTTCAACCCTCTGTGTC+CGG 0.469872 5:-31794768 MsG0580026172.01.T01:CDS
TGTAAACAAGACAACCGTTT+CGG 0.471703 5:+31794461 None:intergenic
AGATGGTTTCCACAATTTGA+AGG 0.472778 5:-31793583 MsG0580026172.01.T01:CDS
TTAGAGTTTGAAGACGAGTA+AGG 0.473128 5:+31793610 None:intergenic
CATCACTGCATCCAAGTAGT+TGG 0.483194 5:+31793730 None:intergenic
ATGCTTCAAAGCTAGGTTGA+AGG 0.483819 5:+31793545 None:intergenic
AAACGATGCAATGAGGGAAC+CGG 0.485105 5:-31793345 MsG0580026172.01.T01:CDS
CTATGGTGATTGTTGATTGT+AGG 0.488013 5:-31793449 MsG0580026172.01.T01:CDS
TTGTAAGCTATAAATAGAGT+TGG 0.506641 5:+31794532 None:intergenic
AACTGAGTTGTCTACCGAAA+CGG 0.507232 5:-31794475 MsG0580026172.01.T01:CDS
GAATCCTCTTCTAATAATAC+CGG 0.516640 5:+31794749 None:intergenic
TCGGTAGTTTAATTCATTTG+AGG 0.518917 5:-31794592 MsG0580026172.01.T01:CDS
TTGGTAACTCCTTCAAATTG+TGG 0.519743 5:+31793574 None:intergenic
AGTTGGAAGTCTTTAACAGA+TGG 0.523200 5:+31793747 None:intergenic
AATAATTTACCAAACTTAGA+GGG 0.528501 5:-31793858 MsG0580026172.01.T01:CDS
GTATTTAACAGAGAAAATAT+GGG 0.529758 5:-31793493 MsG0580026172.01.T01:CDS
CTTAGAGGGACTGTTGAAAG+TGG 0.532083 5:-31793844 MsG0580026172.01.T01:CDS
TCTCACATGTTTCCTCACAT+TGG 0.540669 5:-31794401 MsG0580026172.01.T01:CDS
GGACTGTTGAAAGTGGAAAG+AGG 0.542968 5:-31793837 MsG0580026172.01.T01:CDS
AATGTGAGTATCTCCAGAGA+TGG 0.544990 5:+31793882 None:intergenic
AACTTGGGAAGCATAATCCT+TGG 0.549030 5:+31794078 None:intergenic
GAGCTACGTGATCTAAACTT+AGG 0.550362 5:-31794311 MsG0580026172.01.T01:CDS
TGCTTCAAAGCTAGGTTGAA+GGG 0.553653 5:+31793546 None:intergenic
TTGGAGAAACGATGCAATGA+GGG 0.553940 5:-31793351 MsG0580026172.01.T01:CDS
TGAGGGAACCGGAGAAGACT+GGG 0.561765 5:-31793334 MsG0580026172.01.T01:CDS
AGAGAAAGGACATAGCTTAG+TGG 0.563329 5:-31794333 MsG0580026172.01.T01:CDS
TATTCCATAACCAAAACAAA+GGG 0.564425 5:+31793662 None:intergenic
GTGTCCGGTATTATTAGAAG+AGG 0.570208 5:-31794753 MsG0580026172.01.T01:CDS
TATTCGTGCATGCCTAACAT+TGG 0.570849 5:-31793370 MsG0580026172.01.T01:CDS
CTACGTGATCTAAACTTAGG+AGG 0.577218 5:-31794308 MsG0580026172.01.T01:CDS
GTGAGGTGTCTAATACCGTC+CGG 0.577435 5:+31793411 None:intergenic
ACTTTAGAGTTATCATTACT+CGG 0.583662 5:-31794611 MsG0580026172.01.T01:CDS
CAAGAGTTCTGATCCAACTT+GGG 0.584841 5:+31794063 None:intergenic
GTAAGCTATAAATAGAGTTG+GGG 0.585038 5:+31794534 None:intergenic
ATGTGAGTATCTCCAGAGAT+GGG 0.589755 5:+31793883 None:intergenic
TTATTCCATAACCAAAACAA+AGG 0.601689 5:+31793661 None:intergenic
TGCCTGTCATGGCGGCACCA+AGG 0.602286 5:-31794194 MsG0580026172.01.T01:CDS
TGGAATAACATATTTCCCAA+AGG 0.602542 5:-31793646 MsG0580026172.01.T01:CDS
GCTATAAATAGAGTTGGGGA+AGG 0.603417 5:+31794538 None:intergenic
CCAAGTATTTCACAGACACA+TGG 0.605583 5:+31793946 None:intergenic
AAGTGTTAGTTCTCAAAACC+CGG 0.606543 5:+31794630 None:intergenic
TCAATGAAATATGCCTGTCA+TGG 0.607832 5:-31794205 MsG0580026172.01.T01:CDS
ATCAGAGGCCTACGAAATGT+CGG 0.610275 5:-31794275 MsG0580026172.01.T01:CDS
ATGACAGGCATATTTCATTG+AGG 0.611825 5:+31794207 None:intergenic
TTGAAAATATATCATTACCA+AGG 0.614268 5:-31794095 MsG0580026172.01.T01:CDS
ACCAAAACAAAGGGTAAGGG+TGG 0.619139 5:+31793671 None:intergenic
AAATTAAAATGCTTGCCGGA+CGG 0.620085 5:-31793426 MsG0580026172.01.T01:CDS
TCTTTAACAGATGGAAGACA+TGG 0.621451 5:+31793756 None:intergenic
TTAATGAATCAAGTGAAGTG+AGG 0.622661 5:+31793394 None:intergenic
TCTAATAATACCGGACACAG+AGG 0.627401 5:+31794758 None:intergenic
ATTGGAGAAACGATGCAATG+AGG 0.630436 5:-31793352 MsG0580026172.01.T01:CDS
GGAGGAAAACTGGAAATCAG+AGG 0.630771 5:-31794290 MsG0580026172.01.T01:CDS
ATAAACTACCGACATTTCGT+AGG 0.633332 5:+31794267 None:intergenic
ACGATCATCACTAATAATAG+GGG 0.636995 5:+31794157 None:intergenic
ATAACCAAAACAAAGGGTAA+GGG 0.642017 5:+31793668 None:intergenic
CTAATAATACCGGACACAGA+GGG 0.646610 5:+31794759 None:intergenic
GGGTCTTGACAGATGAACCT+TGG 0.646636 5:+31794177 None:intergenic
ATGAAATATGCCTGTCATGG+CGG 0.648057 5:-31794202 MsG0580026172.01.T01:CDS
AGACTGGGACAAGATAGTGT+TGG 0.649769 5:-31793319 MsG0580026172.01.T01:CDS
GATGATGATGAATTTGACAA+TGG 0.651255 5:-31793924 MsG0580026172.01.T01:CDS
TGATGAATTTGACAATGGTG+TGG 0.664221 5:-31793919 MsG0580026172.01.T01:CDS
AAGCCCTTAAGATTTGTGTG+AGG 0.667929 5:+31794116 None:intergenic
TATTTAACAGAGAAAATATG+GGG 0.676312 5:-31793492 MsG0580026172.01.T01:CDS
GAGTTACTGAAGCAAATATG+TGG 0.682191 5:-31793708 MsG0580026172.01.T01:CDS
TTAACAGAGAAAATATGGGG+AGG 0.703414 5:-31793489 MsG0580026172.01.T01:CDS
ATGTTCAAAGTAGAAAGACA+AGG 0.717963 5:+31793804 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTTATAGCTTACAAAAAT+TGG - Chr5:31793586-31793605 MsG0580026172.01.T01:CDS 15.0%
!! AAATAATTTACCAAACTTAG+AGG - Chr5:31794252-31794271 MsG0580026172.01.T01:CDS 20.0%
!! AATAATTTACCAAACTTAGA+GGG - Chr5:31794253-31794272 MsG0580026172.01.T01:CDS 20.0%
!! AGTATTTAACAGAGAAAATA+TGG - Chr5:31794617-31794636 MsG0580026172.01.T01:CDS 20.0%
!! GCAAATTTAATAGGTAAAAA+AGG - Chr5:31793881-31793900 MsG0580026172.01.T01:CDS 20.0%
!! GTATTTAACAGAGAAAATAT+GGG - Chr5:31794618-31794637 MsG0580026172.01.T01:CDS 20.0%
!! TATTTAACAGAGAAAATATG+GGG - Chr5:31794619-31794638 MsG0580026172.01.T01:CDS 20.0%
!! TTGAAAATATATCATTACCA+AGG - Chr5:31794016-31794035 MsG0580026172.01.T01:CDS 20.0%
!!! TTTAATTCATTTGAGGTATT+TGG - Chr5:31793526-31793545 MsG0580026172.01.T01:CDS 20.0%
! GTTGAAGAAGCAAATTTAAT+AGG - Chr5:31793872-31793891 MsG0580026172.01.T01:CDS 25.0%
! TATTCCATAACCAAAACAAA+GGG + Chr5:31794452-31794471 None:intergenic 25.0%
! TGTAAGCTATAAATAGAGTT+GGG + Chr5:31793581-31793600 None:intergenic 25.0%
! TTATTCCATAACCAAAACAA+AGG + Chr5:31794453-31794472 None:intergenic 25.0%
! TTGTAAGCTATAAATAGAGT+TGG + Chr5:31793582-31793601 None:intergenic 25.0%
!! GTTCAAGTTTATCACAATTT+CGG + Chr5:31794333-31794352 None:intergenic 25.0%
!! TATATTGTTATTCCAGAGAA+AGG - Chr5:31793764-31793783 MsG0580026172.01.T01:CDS 25.0%
!!! ACTTTAGAGTTATCATTACT+CGG - Chr5:31793500-31793519 MsG0580026172.01.T01:CDS 25.0%
!!! AGTTCAAGTTTTTTTAGAGA+TGG + Chr5:31794142-31794161 None:intergenic 25.0%
ACACGATCATCACTAATAAT+AGG + Chr5:31793959-31793978 None:intergenic 30.0%
ACGATCATCACTAATAATAG+GGG + Chr5:31793957-31793976 None:intergenic 30.0%
ATAACCAAAACAAAGGGTAA+GGG + Chr5:31794446-31794465 None:intergenic 30.0%
ATGTTCAAAGTAGAAAGACA+AGG + Chr5:31794310-31794329 None:intergenic 30.0%
CACGATCATCACTAATAATA+GGG + Chr5:31793958-31793977 None:intergenic 30.0%
GAATCCTCTTCTAATAATAC+CGG + Chr5:31793365-31793384 None:intergenic 30.0%
GTAAGCTATAAATAGAGTTG+GGG + Chr5:31793580-31793599 None:intergenic 30.0%
TAGGAAATTAAAATGCTTGC+CGG - Chr5:31794681-31794700 MsG0580026172.01.T01:CDS 30.0%
TCGGTAGTTTAATTCATTTG+AGG - Chr5:31793519-31793538 MsG0580026172.01.T01:CDS 30.0%
TGGAATAACATATTTCCCAA+AGG - Chr5:31794465-31794484 MsG0580026172.01.T01:CDS 30.0%
TTAATGAATCAAGTGAAGTG+AGG + Chr5:31794720-31794739 None:intergenic 30.0%
TTTAGTTGCTCTTTCTGTTA+TGG - Chr5:31794075-31794094 MsG0580026172.01.T01:CDS 30.0%
! CATGATAATTTTCCAATGTG+AGG + Chr5:31793725-31793744 None:intergenic 30.0%
! GATGATGATGAATTTGACAA+TGG - Chr5:31794187-31794206 MsG0580026172.01.T01:CDS 30.0%
! GGAAGGTTTTTATCTCAAAA+CGG + Chr5:31793559-31793578 None:intergenic 30.0%
AAATTAAAATGCTTGCCGGA+CGG - Chr5:31794685-31794704 MsG0580026172.01.T01:CDS 35.0%
AGATGGTTTCCACAATTTGA+AGG - Chr5:31794528-31794547 MsG0580026172.01.T01:CDS 35.0%
AGGTTTCTAAACATCTCCTT+TGG + Chr5:31794484-31794503 None:intergenic 35.0%
AGTTGGAAGTCTTTAACAGA+TGG + Chr5:31794367-31794386 None:intergenic 35.0%
ATAAACTACCGACATTTCGT+AGG + Chr5:31793847-31793866 None:intergenic 35.0%
ATGACAGGCATATTTCATTG+AGG + Chr5:31793907-31793926 None:intergenic 35.0%
CAACCTCACACAAATCTTAA+GGG - Chr5:31793992-31794011 MsG0580026172.01.T01:CDS 35.0%
CATAACCAAAACAAAGGGTA+AGG + Chr5:31794447-31794466 None:intergenic 35.0%
GAGTTACTGAAGCAAATATG+TGG - Chr5:31794403-31794422 MsG0580026172.01.T01:CDS 35.0%
GGTTTCTAAACATCTCCTTT+GGG + Chr5:31794483-31794502 None:intergenic 35.0%
GTTAAAGACTTCCAACTACT+TGG - Chr5:31794370-31794389 MsG0580026172.01.T01:CDS 35.0%
TCAACCTCACACAAATCTTA+AGG - Chr5:31793991-31794010 MsG0580026172.01.T01:CDS 35.0%
TCAATGAAATATGCCTGTCA+TGG - Chr5:31793906-31793925 MsG0580026172.01.T01:CDS 35.0%
TCTAAACTTAGGAGGAAAAC+TGG - Chr5:31793811-31793830 MsG0580026172.01.T01:CDS 35.0%
TCTGCAATCACTTCAATCTA+TGG - Chr5:31794645-31794664 MsG0580026172.01.T01:CDS 35.0%
TCTTTAACAGATGGAAGACA+TGG + Chr5:31794358-31794377 None:intergenic 35.0%
TGATGAATTTGACAATGGTG+TGG - Chr5:31794192-31794211 MsG0580026172.01.T01:CDS 35.0%
TGTAAACAAGACAACCGTTT+CGG + Chr5:31793653-31793672 None:intergenic 35.0%
TTAACAGAGAAAATATGGGG+AGG - Chr5:31794622-31794641 MsG0580026172.01.T01:CDS 35.0%
TTAGAGTTTGAAGACGAGTA+AGG + Chr5:31794504-31794523 None:intergenic 35.0%
! AAGTGTTAGTTCTCAAAACC+CGG + Chr5:31793484-31793503 None:intergenic 35.0%
! CTATGGTGATTGTTGATTGT+AGG - Chr5:31794662-31794681 MsG0580026172.01.T01:CDS 35.0%
! CTTCAAACTCTAAGAGTAGA+TGG - Chr5:31794511-31794530 MsG0580026172.01.T01:CDS 35.0%
! TGGATTGCATGTTTTGTGAA+CGG - Chr5:31794095-31794114 MsG0580026172.01.T01:CDS 35.0%
! TTGGTAACTCCTTCAAATTG+TGG + Chr5:31794540-31794559 None:intergenic 35.0%
!!! CAACGATTCTGCTTTTTTGA+AGG + Chr5:31793387-31793406 None:intergenic 35.0%
!!! CTTACCCTTTGTTTTGGTTA+TGG - Chr5:31794445-31794464 MsG0580026172.01.T01:CDS 35.0%
AACTGAGTTGTCTACCGAAA+CGG - Chr5:31793636-31793655 MsG0580026172.01.T01:CDS 40.0%
AAGCCCTTAAGATTTGTGTG+AGG + Chr5:31793998-31794017 None:intergenic 40.0%
AAGGATTATGCTTCCCAAGT+TGG - Chr5:31794035-31794054 MsG0580026172.01.T01:CDS 40.0%
AATGTGAGTATCTCCAGAGA+TGG + Chr5:31794232-31794251 None:intergenic 40.0%
ACTAAGCTATGTCCTTTCTC+TGG + Chr5:31793779-31793798 None:intergenic 40.0%
AGAGAAAGGACATAGCTTAG+TGG - Chr5:31793778-31793797 MsG0580026172.01.T01:CDS 40.0%
ATGAAATATGCCTGTCATGG+CGG - Chr5:31793909-31793928 MsG0580026172.01.T01:CDS 40.0%
ATGTGAGTATCTCCAGAGAT+GGG + Chr5:31794231-31794250 None:intergenic 40.0%
ATTGGAGAAACGATGCAATG+AGG - Chr5:31794759-31794778 MsG0580026172.01.T01:CDS 40.0%
CCAAGTATTTCACAGACACA+TGG + Chr5:31794168-31794187 None:intergenic 40.0%
CCATGTGTCTGTGAAATACT+TGG - Chr5:31794165-31794184 MsG0580026172.01.T01:CDS 40.0%
CTAATAATACCGGACACAGA+GGG + Chr5:31793355-31793374 None:intergenic 40.0%
CTACGTGATCTAAACTTAGG+AGG - Chr5:31793803-31793822 MsG0580026172.01.T01:CDS 40.0%
GACGATAAATTTCCCATCTC+TGG - Chr5:31794216-31794235 MsG0580026172.01.T01:CDS 40.0%
GAGCTACGTGATCTAAACTT+AGG - Chr5:31793800-31793819 MsG0580026172.01.T01:CDS 40.0%
GCTATAAATAGAGTTGGGGA+AGG + Chr5:31793576-31793595 None:intergenic 40.0%
GTGTCCGGTATTATTAGAAG+AGG - Chr5:31793358-31793377 MsG0580026172.01.T01:CDS 40.0%
TACCAATAAAGCACACTCTC+CGG - Chr5:31793462-31793481 MsG0580026172.01.T01:CDS 40.0%
TATCCAGATGCTTCAAAGCT+AGG + Chr5:31794576-31794595 None:intergenic 40.0%
TATTCGTGCATGCCTAACAT+TGG - Chr5:31794741-31794760 MsG0580026172.01.T01:CDS 40.0%
TCTAATAATACCGGACACAG+AGG + Chr5:31793356-31793375 None:intergenic 40.0%
TCTCACATGTTTCCTCACAT+TGG - Chr5:31793710-31793729 MsG0580026172.01.T01:CDS 40.0%
TGCATCGTTTCTCCAATGTT+AGG + Chr5:31794756-31794775 None:intergenic 40.0%
TTCAACAGTCCCTCTAAGTT+TGG + Chr5:31794265-31794284 None:intergenic 40.0%
TTGGAGAAACGATGCAATGA+GGG - Chr5:31794760-31794779 MsG0580026172.01.T01:CDS 40.0%
! AACTTGGGAAGCATAATCCT+TGG + Chr5:31794036-31794055 None:intergenic 40.0%
! ATGCTTCAAAGCTAGGTTGA+AGG + Chr5:31794569-31794588 None:intergenic 40.0%
! CAAGAGTTCTGATCCAACTT+GGG + Chr5:31794051-31794070 None:intergenic 40.0%
! TGCTTCAAAGCTAGGTTGAA+GGG + Chr5:31794568-31794587 None:intergenic 40.0%
! TGTGAACGGTTTTCATCACT+TGG - Chr5:31794109-31794128 MsG0580026172.01.T01:CDS 40.0%
AAACGATGCAATGAGGGAAC+CGG - Chr5:31794766-31794785 MsG0580026172.01.T01:CDS 45.0%
ACCAAAACAAAGGGTAAGGG+TGG + Chr5:31794443-31794462 None:intergenic 45.0%
ACCAATAAAGCACACTCTCC+GGG - Chr5:31793463-31793482 MsG0580026172.01.T01:CDS 45.0%
AGACTGGGACAAGATAGTGT+TGG - Chr5:31794792-31794811 MsG0580026172.01.T01:CDS 45.0%
ATCAGAGGCCTACGAAATGT+CGG - Chr5:31793836-31793855 MsG0580026172.01.T01:CDS 45.0%
CATCACTGCATCCAAGTAGT+TGG + Chr5:31794384-31794403 None:intergenic 45.0%
CTTAGAGGGACTGTTGAAAG+TGG - Chr5:31794267-31794286 MsG0580026172.01.T01:CDS 45.0%
GGACTGTTGAAAGTGGAAAG+AGG - Chr5:31794274-31794293 MsG0580026172.01.T01:CDS 45.0%
GGAGGAAAACTGGAAATCAG+AGG - Chr5:31793821-31793840 MsG0580026172.01.T01:CDS 45.0%
TAGTTTCAACCCTCTGTGTC+CGG - Chr5:31793343-31793362 MsG0580026172.01.T01:CDS 45.0%
TATCTTGTCCCAGTCTTCTC+CGG + Chr5:31794788-31794807 None:intergenic 45.0%
! CCAAGAGTTCTGATCCAACT+TGG + Chr5:31794052-31794071 None:intergenic 45.0%
! CCAAGTTGGATCAGAACTCT+TGG - Chr5:31794049-31794068 MsG0580026172.01.T01:CDS 45.0%
! GCTAGGTTGAAGGGTTCATT+TGG + Chr5:31794559-31794578 None:intergenic 45.0%
!! ACCACCCTTACCCTTTGTTT+TGG - Chr5:31794439-31794458 MsG0580026172.01.T01:CDS 45.0%
!! CAACCTAGCTTTGAAGCATC+TGG - Chr5:31794570-31794589 MsG0580026172.01.T01:CDS 45.0%
GGGTCTTGACAGATGAACCT+TGG + Chr5:31793937-31793956 None:intergenic 50.0%
! ACCCGGAGAGTGTGCTTTAT+TGG + Chr5:31793467-31793486 None:intergenic 50.0%
! GTGAGGTGTCTAATACCGTC+CGG + Chr5:31794703-31794722 None:intergenic 50.0%
ATGAGGGAACCGGAGAAGAC+TGG - Chr5:31794776-31794795 MsG0580026172.01.T01:CDS 55.0%
TGAGGGAACCGGAGAAGACT+GGG - Chr5:31794777-31794796 MsG0580026172.01.T01:CDS 55.0%
!! AACCTTGGTGCCGCCATGAC+AGG + Chr5:31793922-31793941 None:intergenic 60.0%
TGCCTGTCATGGCGGCACCA+AGG - Chr5:31793917-31793936 MsG0580026172.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 31793290 31794843 31793290 ID=MsG0580026172.01;Name=MsG0580026172.01
Chr5 mRNA 31793290 31794843 31793290 ID=MsG0580026172.01.T01;Parent=MsG0580026172.01;Name=MsG0580026172.01.T01;_AED=0.45;_eAED=0.46;_QI=0|-1|0|1|-1|1|1|0|517
Chr5 exon 31793290 31794843 31793290 ID=MsG0580026172.01.T01:exon:13211;Parent=MsG0580026172.01.T01
Chr5 CDS 31793290 31794843 31793290 ID=MsG0580026172.01.T01:cds;Parent=MsG0580026172.01.T01
Gene Sequence

>MsG0580026172.01.T01

ATGGTTTTAGAGAATGCATCGGTGACTAACTTGTCAAAAAGCACACATCATATTAGTTTCAACCCTCTGTGTCCGGTATTATTAGAAGAGGATTCCTTCAAAAAAGCAGAATCGTTGCGAACATTGTATCAAAACTTTAGAGAAGATTTTCAATTAAACTCTGAAAGTGTCTTACCAATAAAGCACACTCTCCGGGTTTTGAGAACTAACACTTTAGAGTTATCATTACTCGGTAGTTTAATTCATTTGAGGTATTTGGAGCTTCACCGTTTTGAGATAAAAACCTTCCCCAACTCTATTTATAGCTTACAAAAATTGGAAATCTTGAAATTGAAATCTATTTACAAACTGAGTTGTCTACCGAAACGGTTGTCTTGTTTACAAAATCTTAGACATTTAGTCATTGAACATTGTTCGTTGTCTCACATGTTTCCTCACATTGGAAAATTATCATGCTTAAAAACATTAAGTGTGTATATTGTTATTCCAGAGAAAGGACATAGCTTAGTGGAGCTACGTGATCTAAACTTAGGAGGAAAACTGGAAATCAGAGGCCTACGAAATGTCGGTAGTTTATCTGAAGTTGAAGAAGCAAATTTAATAGGTAAAAAAGGCCTCAATGAAATATGCCTGTCATGGCGGCACCAAGGTTCATCTGTCAAGACCCCTATTATTAGTGATGATCGTGTATTTGAAGTGCTTCAACCTCACACAAATCTTAAGGGCTTGAAAATATATCATTACCAAGGATTATGCTTCCCAAGTTGGATCAGAACTCTTGGCAATTTAGTTGCTCTTTCTGTTATGGATTGCATGTTTTGTGAACGGTTTTCATCACTTGGTAAACTACCATCTCTAAAAAAACTTGAACTTTTCCATGTGTCTGTGAAATACTTGGATGATGATGAATTTGACAATGGTGTGGAGACGATAAATTTCCCATCTCTGGAGATACTCACATTAAATAATTTACCAAACTTAGAGGGACTGTTGAAAGTGGAAAGAGGAGAAATGTTTCCTTGTCTTTCTACTTTGAACATCCGAAATTGTGATAAACTTGAACTTCCATGTCTTCCATCTGTTAAAGACTTCCAACTACTTGGATGCAGTGATGAGTTACTGAAGCAAATATGTGGCATGTATAGTCTTACCACCCTTACCCTTTGTTTTGGTTATGGAATAACATATTTCCCAAAGGAGATGTTTAGAAACCTTACTCGTCTTCAAACTCTAAGAGTAGATGGTTTCCACAATTTGAAGGAGTTACCAAATGAACCCTTCAACCTAGCTTTGAAGCATCTGGATATCAATTTGTGCAGCGAGCTTGAGTATTTAACAGAGAAAATATGGGGAGGTCTGCAATCACTTCAATCTATGGTGATTGTTGATTGTAGGAAATTAAAATGCTTGCCGGACGGTATTAGACACCTCACTTCACTTGATTCATTAACTATTCGTGCATGCCTAACATTGGAGAAACGATGCAATGAGGGAACCGGAGAAGACTGGGACAAGATAGTGTTGGAACAAAATGTGTTTAACAATGAACCTTAA

Protein sequence

>MsG0580026172.01.T01

MVLENASVTNLSKSTHHISFNPLCPVLLEEDSFKKAESLRTLYQNFREDFQLNSESVLPIKHTLRVLRTNTLELSLLGSLIHLRYLELHRFEIKTFPNSIYSLQKLEILKLKSIYKLSCLPKRLSCLQNLRHLVIEHCSLSHMFPHIGKLSCLKTLSVYIVIPEKGHSLVELRDLNLGGKLEIRGLRNVGSLSEVEEANLIGKKGLNEICLSWRHQGSSVKTPIISDDRVFEVLQPHTNLKGLKIYHYQGLCFPSWIRTLGNLVALSVMDCMFCERFSSLGKLPSLKKLELFHVSVKYLDDDEFDNGVETINFPSLEILTLNNLPNLEGLLKVERGEMFPCLSTLNIRNCDKLELPCLPSVKDFQLLGCSDELLKQICGMYSLTTLTLCFGYGITYFPKEMFRNLTRLQTLRVDGFHNLKELPNEPFNLALKHLDINLCSELEYLTEKIWGGLQSLQSMVIVDCRKLKCLPDGIRHLTSLDSLTIRACLTLEKRCNEGTGEDWDKIVLEQNVFNNEP*