AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180001907.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001907.01.T01 MTR_1g046250 90.687 451 3 2 1 415 1 448 0.0 830
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001907.01.T01 AT1G04620 77.541 423 59 1 29 415 40 462 0.0 694

Find 115 sgRNAs with CRISPR-Local

Find 512 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCAAGTTTCCAACAAATTT+TGG 0.053248 1:+29150387 None:intergenic
TGTGGAGCACCACTTAAATT+TGG 0.219314 1:-29152775 MsG0180001907.01.T01:CDS
TCGTAATGGAGAACTGTTTC+TGG 0.255367 1:+29152568 None:intergenic
GCTGATGATAAAGCTAAATT+TGG 0.271815 1:-29150782 MsG0180001907.01.T01:intron
CTGTCTCCCAGCAAATGATT+TGG 0.288560 1:-29151569 MsG0180001907.01.T01:CDS
CAACAAGTGCAAGGGTATTA+AGG 0.290200 1:+29154109 None:intergenic
TTAGCAGCCATCACTTCTTC+TGG 0.292447 1:+29154159 None:intergenic
TAAGAATGCTTGTGCTTTCT+TGG 0.303722 1:-29157030 MsG0180001907.01.T01:CDS
GCAGGTTCACTTGAAGCATT+TGG 0.351862 1:-29151702 MsG0180001907.01.T01:intron
CAAAACAGGACTGGAGAAAA+AGG 0.352288 1:-29157142 MsG0180001907.01.T01:CDS
GCAATTGAAATGCTTAAATC+AGG 0.358345 1:-29154500 MsG0180001907.01.T01:CDS
ACCTTTCCTTTCCCCACAAC+CGG 0.373870 1:+29150150 None:intergenic
AGTCAGAATATACCTTCAAC+AGG 0.373888 1:+29155645 None:intergenic
CAGCCTGCCCCAAAATTTGT+TGG 0.382744 1:-29150396 MsG0180001907.01.T01:CDS
CCCTAAGTAGGTCTCATCTA+AGG 0.390531 1:+29155704 None:intergenic
CTTGCAAATTCAATGCCCTT+TGG 0.401046 1:+29150218 None:intergenic
CAACCTTGCTAAAACAGGTC+TGG 0.404047 1:+29154271 None:intergenic
AGAATCCTCCATTTCAAAAC+AGG 0.404533 1:-29157156 MsG0180001907.01.T01:CDS
ATTTGTACGTAAACCGGTTG+TGG 0.404818 1:-29150163 MsG0180001907.01.T01:CDS
TTTCTGTGGTGTAGGTTGCC+AGG 0.407229 1:-29152912 MsG0180001907.01.T01:CDS
ACATCAACCAAATCATTTGC+TGG 0.410174 1:+29151562 None:intergenic
AAAAGTTCATACAACTGTAT+AGG 0.414289 1:+29149783 None:intergenic
AAATTGGAACCTGTTGTTCA+TGG 0.417037 1:-29155747 MsG0180001907.01.T01:CDS
TAGGTTCCACCTGGTGGGAT+AGG 0.417092 1:+29157113 None:intergenic
CGAGTTTATGCAAGATTACA+AGG 0.417803 1:-29152548 MsG0180001907.01.T01:intron
AACTATCAGTAATAAGCTTT+AGG 0.417887 1:-29149806 MsG0180001907.01.T01:three_prime_UTR
GGAACTATTTGTACGTAAAC+CGG 0.418637 1:-29150169 MsG0180001907.01.T01:CDS
CTTCCTCTACCATGAACAAC+AGG 0.421097 1:+29155738 None:intergenic
GATTGTAGCTAAATATATTC+TGG 0.434666 1:-29149676 MsG0180001907.01.T01:three_prime_UTR
AAGAATGCTTGTGCTTTCTT+GGG 0.435235 1:-29157029 MsG0180001907.01.T01:CDS
TTATTGCTCCATCTTGCTAC+AGG 0.435998 1:-29151540 MsG0180001907.01.T01:intron
TTTGCTGGGAGACAGAAATA+AGG 0.436430 1:+29151577 None:intergenic
TAAATGGTTGCAGGGCTGAT+AGG 0.440802 1:-29150056 MsG0180001907.01.T01:intron
CGCTTGATTATCATACCATT+CGG 0.443793 1:-29150190 MsG0180001907.01.T01:CDS
GTTTGACAAAATGTATATAA+CGG 0.445252 1:+29149704 None:intergenic
CCTTAGATGAGACCTACTTA+GGG 0.447504 1:-29155704 MsG0180001907.01.T01:CDS
AATCATCTTCTTTATTTGTG+TGG 0.454450 1:-29157564 MsG0180001907.01.T01:five_prime_UTR
GAAGCCAACCTTGCTAAAAC+AGG 0.457249 1:+29154266 None:intergenic
GCTTGTGCTTTCTTGGGAGA+TGG 0.464642 1:-29157023 MsG0180001907.01.T01:CDS
CAACGGAACCAGGGAAGGAC+TGG 0.466477 1:-29152620 MsG0180001907.01.T01:CDS
AGTGCAAGGGTATTAAGGTT+AGG 0.466556 1:+29154114 None:intergenic
GTCAAAACTTTGTCTCTAGC+TGG 0.466618 1:-29149847 MsG0180001907.01.T01:three_prime_UTR
ATTTGTCATGGAGACTGTTA+AGG 0.468608 1:-29150804 MsG0180001907.01.T01:CDS
GGCACACCTATGCCACTGAT+TGG 0.471309 1:+29149933 None:intergenic
CGACTGCATTGATCTTTAGC+AGG 0.474250 1:+29157089 None:intergenic
TTTGTACGTAAACCGGTTGT+GGG 0.477133 1:-29150162 MsG0180001907.01.T01:CDS
AGCACGAATGGATAGAGAAA+GGG 0.479689 1:+29157456 None:intergenic
AGAGCTTATCCAAATTTAAG+TGG 0.483058 1:+29152766 None:intergenic
CTGGGAGCAAATCTGTCGTC+AGG 0.485421 1:+29154290 None:intergenic
AATCTTGCATAAACTCGTAA+TGG 0.487024 1:+29152554 None:intergenic
AAACTTATCCAGTCCTTCCC+TGG 0.487043 1:+29152612 None:intergenic
TATGTTCAGGTTGGTCCAAA+GGG 0.488373 1:-29150233 MsG0180001907.01.T01:intron
CGGTTTATACTTTATAGTCA+TGG 0.488613 1:+29149724 None:intergenic
ACCTTAGATGAGACCTACTT+AGG 0.488804 1:-29155705 MsG0180001907.01.T01:CDS
AACCTTGCTAAAACAGGTCT+GGG 0.491902 1:+29154272 None:intergenic
TTTCATCATTGACAGGCTGC+AGG 0.493106 1:-29152950 MsG0180001907.01.T01:intron
TAACTTACTGAATTAACTGT+TGG 0.494896 1:+29150910 None:intergenic
CTATGTTCAGGTTGGTCCAA+AGG 0.496815 1:-29150234 MsG0180001907.01.T01:intron
CTACAGTGGACAACGGAACC+AGG 0.500200 1:-29152630 MsG0180001907.01.T01:intron
GCAGGGTAGGTTCCACCTGG+TGG 0.508024 1:+29157107 None:intergenic
GAACCTGTTGTTCATGGTAG+AGG 0.511132 1:-29155741 MsG0180001907.01.T01:CDS
TTCATAGGAGCTCAATGGAC+TGG 0.514762 1:-29154539 MsG0180001907.01.T01:intron
GCATTGATCTTTAGCAGGGT+AGG 0.515192 1:+29157094 None:intergenic
ACAAATAACCTGTAGCAAGA+TGG 0.517182 1:+29151532 None:intergenic
CGGAAACTTAACCCTGTTGA+AGG 0.518911 1:-29155657 MsG0180001907.01.T01:intron
CGTAAACCGGTTGTGGGGAA+AGG 0.530810 1:-29150156 MsG0180001907.01.T01:CDS
TTTAAGCATTTCAATTGCAA+TGG 0.533394 1:+29154505 None:intergenic
TTAACAGTCTCCATGACAAA+TGG 0.534122 1:+29150806 None:intergenic
AGCCACATCATCATCGGTGT+TGG 0.534303 1:-29157532 MsG0180001907.01.T01:five_prime_UTR
CATCAACCAAATCATTTGCT+GGG 0.539146 1:+29151563 None:intergenic
ATGAGGAACTTCTGTATGCT+CGG 0.539703 1:-29155677 MsG0180001907.01.T01:CDS
TTAAGGTTAGGAGATAATGT+TGG 0.544648 1:+29154126 None:intergenic
TAATACCCTTGCACTTGTTG+AGG 0.544891 1:-29154106 MsG0180001907.01.T01:intron
CATGCTCCAATCAGTGGCAT+AGG 0.547046 1:-29149939 MsG0180001907.01.T01:three_prime_UTR
AAGCACGAATGGATAGAGAA+AGG 0.547651 1:+29157455 None:intergenic
GAAGAAGTGATGGCTGCTAA+AGG 0.556856 1:-29154156 MsG0180001907.01.T01:CDS
CCTCCATTTCAAAACAGGAC+TGG 0.559011 1:-29157151 MsG0180001907.01.T01:CDS
GGTGTAGGTTGCCAGGTCCA+AGG 0.559413 1:-29152905 MsG0180001907.01.T01:intron
TTCATATGCTAAGAAAATTG+TGG 0.562861 1:-29150025 MsG0180001907.01.T01:CDS
AGGTCAAAGCCTATCCCACC+AGG 0.565383 1:-29157122 MsG0180001907.01.T01:CDS
AGAAGAAGAAGAAGCACGAA+TGG 0.567669 1:+29157444 None:intergenic
TCTTCTTCTTCTTCATCACA+AGG 0.576579 1:-29157433 MsG0180001907.01.T01:intron
CACAAACCTCAACAAGTGCA+AGG 0.577511 1:+29154100 None:intergenic
TCTCAGAGAAGTGATTCTAA+AGG 0.579377 1:-29149966 MsG0180001907.01.T01:exon
AATTGCAGCATTAAGATCTG+TGG 0.579563 1:-29152793 MsG0180001907.01.T01:intron
TGAAATGCTTAAATCAGGCA+TGG 0.579843 1:-29154495 MsG0180001907.01.T01:CDS
CAGTAGTGGTACCTTGGACC+TGG 0.590071 1:+29152894 None:intergenic
GCACGAATGGATAGAGAAAG+GGG 0.593257 1:+29157457 None:intergenic
AAGCTGTCATTTGTGTACAA+AGG 0.596616 1:-29154469 MsG0180001907.01.T01:intron
TTAGCAGGGTAGGTTCCACC+TGG 0.597375 1:+29157104 None:intergenic
CAGGACACCAGAAGAAGTGA+TGG 0.602250 1:-29154166 MsG0180001907.01.T01:CDS
GACTGCATTGATCTTTAGCA+GGG 0.602897 1:+29157090 None:intergenic
GACCTACTTAGGGGTCTATG+AGG 0.605671 1:-29155694 MsG0180001907.01.T01:CDS
GGATTACATGCTCCAATCAG+TGG 0.605996 1:-29149945 MsG0180001907.01.T01:three_prime_UTR
GGATAGGCGACCATTTGTCA+TGG 0.606587 1:-29150816 MsG0180001907.01.T01:CDS
CAGGGTAGGTTCCACCTGGT+GGG 0.606958 1:+29157108 None:intergenic
TTTGGACGGTCGTATTGAAG+AGG 0.610876 1:-29151684 MsG0180001907.01.T01:intron
GTTCACTTGAAGCATTTGGA+CGG 0.611001 1:-29151698 MsG0180001907.01.T01:CDS
TACGTACAAATAGTTCCGAA+TGG 0.612235 1:+29150175 None:intergenic
CTGCTAAAGATCAATGCAGT+CGG 0.613645 1:-29157088 MsG0180001907.01.T01:CDS
TTCATGGTACACAATACAAG+GGG 0.613886 1:-29149760 MsG0180001907.01.T01:three_prime_UTR
TTGTACGTAAACCGGTTGTG+GGG 0.620641 1:-29150161 MsG0180001907.01.T01:CDS
GTGGACAACGGAACCAGGGA+AGG 0.626227 1:-29152625 MsG0180001907.01.T01:CDS
TTTCATGGTACACAATACAA+GGG 0.631514 1:-29149761 MsG0180001907.01.T01:three_prime_UTR
AGCCAACACCGATGATGATG+TGG 0.634417 1:+29157530 None:intergenic
ACCGGTTGTGGGGAAAGGAA+AGG 0.636372 1:-29150151 MsG0180001907.01.T01:intron
TACAGTGGACAACGGAACCA+GGG 0.642779 1:-29152629 MsG0180001907.01.T01:intron
AAAGATCAATGCAGTCGGTG+TGG 0.644116 1:-29157083 MsG0180001907.01.T01:CDS
TTCCTCATAGACCCCTAAGT+AGG 0.644398 1:+29155692 None:intergenic
ACAAACCTCAACAAGTGCAA+GGG 0.653375 1:+29154101 None:intergenic
GTCAGAATATACCTTCAACA+GGG 0.677337 1:+29155646 None:intergenic
CCTTATTCTACAGTGGACAA+CGG 0.682523 1:-29152637 MsG0180001907.01.T01:intron
CTTAGATGAGACCTACTTAG+GGG 0.700742 1:-29155703 MsG0180001907.01.T01:CDS
TCAAAGCCTATCCCACCAGG+TGG 0.703549 1:-29157119 MsG0180001907.01.T01:CDS
TGAAACGACAGGAATGAACG+TGG 0.713648 1:-29150976 MsG0180001907.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTATTAAGAAGATAAAA+TGG - Chr1:29155042-29155061 MsG0180001907.01.T01:intron 10.0%
!! ATTTATTAAGAAGATAAAAT+GGG - Chr1:29155043-29155062 MsG0180001907.01.T01:intron 10.0%
!!! TAAACTATTTTTATAAGAAA+AGG + Chr1:29154934-29154953 None:intergenic 10.0%
!!! TTATTTTATCACATTATTAT+CGG + Chr1:29149920-29149939 None:intergenic 10.0%
!!! TTTTTTTTTTTTTTGTTTCT+TGG - Chr1:29156980-29156999 MsG0180001907.01.T01:intron 10.0%
!! ATAAATTTATCTATTCATTC+AGG - Chr1:29153257-29153276 MsG0180001907.01.T01:intron 15.0%
!! TTATATTGTTGAAACATAAA+TGG - Chr1:29157174-29157193 MsG0180001907.01.T01:intron 15.0%
!!! AAACTGATTCATTAAAATAA+TGG - Chr1:29155307-29155326 MsG0180001907.01.T01:intron 15.0%
!!! AACTGATTCATTAAAATAAT+GGG - Chr1:29155308-29155327 MsG0180001907.01.T01:intron 15.0%
!!! ATATTTTCTTTTTGATGAAA+TGG - Chr1:29156685-29156704 MsG0180001907.01.T01:intron 15.0%
!!! ATTCATCTGTTTATTTTTTT+TGG - Chr1:29154541-29154560 MsG0180001907.01.T01:intron 15.0%
!!! CATTTTAAATTATTCTTTCT+TGG - Chr1:29151740-29151759 MsG0180001907.01.T01:intron 15.0%
!!! TTTTAAATTTTAACTTGAAC+AGG - Chr1:29155644-29155663 MsG0180001907.01.T01:intron 15.0%
!!! TTTTATAATGAAAAAACTGA+CGG + Chr1:29156000-29156019 None:intergenic 15.0%
!! AAAACTATCACTTTATTAGA+TGG - Chr1:29156018-29156037 MsG0180001907.01.T01:intron 20.0%
!! AAATAGAGAAAAGATACTTA+AGG + Chr1:29156759-29156778 None:intergenic 20.0%
!! AAATCATTATGTGATATGAA+TGG - Chr1:29150370-29150389 MsG0180001907.01.T01:CDS 20.0%
!! AAATGTTTCTTAAAGGAATA+TGG - Chr1:29156213-29156232 MsG0180001907.01.T01:intron 20.0%
!! AATGAAAAACATTAGAAACA+TGG + Chr1:29152836-29152855 None:intergenic 20.0%
!! AGATTCAATTAGTTAAATGT+GGG - Chr1:29155130-29155149 MsG0180001907.01.T01:intron 20.0%
!! AGCATATGAAAAAAACTTAA+AGG + Chr1:29152415-29152434 None:intergenic 20.0%
!! AGTCATAGAATGAATATAAA+AGG + Chr1:29154268-29154287 None:intergenic 20.0%
!! ATATCAATGAAATATTTCAG+TGG + Chr1:29152076-29152095 None:intergenic 20.0%
!! ATTAAATGTAAGTGTAAAAC+TGG - Chr1:29154189-29154208 MsG0180001907.01.T01:intron 20.0%
!! GAATTACTTATGTATACTAT+AGG - Chr1:29153415-29153434 MsG0180001907.01.T01:intron 20.0%
!! GATCTTAATTTCTATGATTT+AGG + Chr1:29152054-29152073 None:intergenic 20.0%
!! GTTTGACAAAATGTATATAA+CGG + Chr1:29157545-29157564 None:intergenic 20.0%
!! TAGATTCAATTAGTTAAATG+TGG - Chr1:29155129-29155148 MsG0180001907.01.T01:intron 20.0%
!! TATGCAAGAGAATTTATTTA+TGG - Chr1:29157118-29157137 MsG0180001907.01.T01:CDS 20.0%
!! TCCTCATAAAATTATTGTAA+AGG + Chr1:29152231-29152250 None:intergenic 20.0%
!! TGAAAAATCATGGTTTATAA+GGG - Chr1:29154729-29154748 MsG0180001907.01.T01:intron 20.0%
!! TGCATATTGAAATTTCAATT+TGG + Chr1:29151274-29151293 None:intergenic 20.0%
!! TTAAAATACTTCATTTCTTC+AGG - Chr1:29153061-29153080 MsG0180001907.01.T01:intron 20.0%
!! TTCAATGTAATTATATGTGT+CGG - Chr1:29149945-29149964 MsG0180001907.01.T01:three_prime_UTR 20.0%
!!! AATTAGATAATGGAATAGTT+AGG - Chr1:29151860-29151879 MsG0180001907.01.T01:intron 20.0%
!!! ACAATGTCTGAAATAAAAAA+TGG + Chr1:29154236-29154255 None:intergenic 20.0%
!!! ATTAATCTACATGTTTTGAT+TGG - Chr1:29152807-29152826 MsG0180001907.01.T01:intron 20.0%
!!! ATTATTCTTTCTTGGTTTTT+TGG - Chr1:29151748-29151767 MsG0180001907.01.T01:intron 20.0%
!!! GATTGCATTTTTACTAAATT+TGG - Chr1:29156879-29156898 MsG0180001907.01.T01:intron 20.0%
!!! GTAATATATTAAGTTCTAAC+TGG + Chr1:29154113-29154132 None:intergenic 20.0%
!!! TATAATCTGACTTATTTTCT+GGG - Chr1:29152896-29152915 MsG0180001907.01.T01:intron 20.0%
!!! TCCTTTACAATAATTTTATG+AGG - Chr1:29152227-29152246 MsG0180001907.01.T01:intron 20.0%
!!! TTATAATCTGACTTATTTTC+TGG - Chr1:29152895-29152914 MsG0180001907.01.T01:intron 20.0%
!!! TTTAAGAAGCATTTTTTCAA+TGG - Chr1:29151796-29151815 MsG0180001907.01.T01:intron 20.0%
!!! TTTCGTTTTGATTTCTTATA+TGG - Chr1:29155768-29155787 MsG0180001907.01.T01:intron 20.0%
! AAAAGTTCATACAACTGTAT+AGG + Chr1:29157466-29157485 None:intergenic 25.0%
! AACTATCAGTAATAAGCTTT+AGG - Chr1:29157440-29157459 MsG0180001907.01.T01:CDS 25.0%
! AATAAGCTGCTAAAAACTTA+TGG - Chr1:29152454-29152473 MsG0180001907.01.T01:intron 25.0%
! ACAAGTAGATGTAAAAAACT+CGG + Chr1:29155940-29155959 None:intergenic 25.0%
! ACTCATCACTCATAAAATAA+AGG + Chr1:29150280-29150299 None:intergenic 25.0%
! AGCAAACATAAAACTTTAGT+CGG + Chr1:29151004-29151023 None:intergenic 25.0%
! AGTAAGGCAATATATAATCT+TGG + Chr1:29155502-29155521 None:intergenic 25.0%
! ATTAGTGCAACATAAAATGA+AGG + Chr1:29155795-29155814 None:intergenic 25.0%
! ATTATCTAATTACCACAAAG+GGG + Chr1:29151851-29151870 None:intergenic 25.0%
! ATTTCACAAAGTTACTAACA+AGG - Chr1:29151025-29151044 MsG0180001907.01.T01:intron 25.0%
! CATTATCTAATTACCACAAA+GGG + Chr1:29151852-29151871 None:intergenic 25.0%
! CTCATCACTCATAAAATAAA+GGG + Chr1:29150279-29150298 None:intergenic 25.0%
! CTGAAAAATCATGGTTTATA+AGG - Chr1:29154728-29154747 MsG0180001907.01.T01:intron 25.0%
! CTTAATTTCTATGATTTAGG+AGG + Chr1:29152051-29152070 None:intergenic 25.0%
! CTTATAAGAATATTAAGCGA+TGG + Chr1:29151372-29151391 None:intergenic 25.0%
! GATTCAATTAGTTAAATGTG+GGG - Chr1:29155131-29155150 MsG0180001907.01.T01:intron 25.0%
! GATTGTAGCTAAATATATTC+TGG - Chr1:29157570-29157589 MsG0180001907.01.T01:five_prime_UTR 25.0%
! GCTTCTTAAAATGTAAAGAA+TGG + Chr1:29151786-29151805 None:intergenic 25.0%
! GGTTTCAAACTAAATACTAA+AGG + Chr1:29152113-29152132 None:intergenic 25.0%
! GTGTAAAATAACTCAATCAT+TGG + Chr1:29154084-29154103 None:intergenic 25.0%
! TAAAGCTTAACTACTAGAAT+AGG + Chr1:29152529-29152548 None:intergenic 25.0%
! TAACTTACTGAATTAACTGT+TGG + Chr1:29156339-29156358 None:intergenic 25.0%
! TAGTTTCATACTCATTAGAA+CGG + Chr1:29151654-29151673 None:intergenic 25.0%
! TCAAAATTAGTGTTCTCAAA+TGG + Chr1:29156639-29156658 None:intergenic 25.0%
! TCTGAACCAAAAAATAAAAC+TGG - Chr1:29154035-29154054 MsG0180001907.01.T01:intron 25.0%
! TGGATAAACAGCTTAATTAA+GGG - Chr1:29152317-29152336 MsG0180001907.01.T01:intron 25.0%
! TTCATATGCTAAGAAAATTG+TGG - Chr1:29157221-29157240 MsG0180001907.01.T01:intron 25.0%
! TTGGATAAACAGCTTAATTA+AGG - Chr1:29152316-29152335 MsG0180001907.01.T01:intron 25.0%
! TTTAAGCATTTCAATTGCAA+TGG + Chr1:29152744-29152763 None:intergenic 25.0%
! TTTGTCGCAAAAAGTAAATT+TGG + Chr1:29151169-29151188 None:intergenic 25.0%
!! AACAAGTTGAAAACAACTTA+TGG + Chr1:29154845-29154864 None:intergenic 25.0%
!! AATCATCTTCTTTATTTGTG+TGG - Chr1:29149682-29149701 MsG0180001907.01.T01:three_prime_UTR 25.0%
!! ACAATTTTCTTAGCATATGA+AGG + Chr1:29157222-29157241 None:intergenic 25.0%
!! ACTTATTGATTATTTCCACT+AGG + Chr1:29151112-29151131 None:intergenic 25.0%
!! AGACATAATGCATATTTTGT+AGG + Chr1:29157337-29157356 None:intergenic 25.0%
!! ATAAAGAGTCCAATCAATTT+TGG + Chr1:29151460-29151479 None:intergenic 25.0%
!! ATAAATTGGATGCTTTTACA+TGG - Chr1:29152171-29152190 MsG0180001907.01.T01:intron 25.0%
!! ATCAAGTTTCCAACAAATTT+TGG + Chr1:29156862-29156881 None:intergenic 25.0%
!! GTAAAATTCGTTCTTTTCAT+AGG - Chr1:29152692-29152711 MsG0180001907.01.T01:intron 25.0%
!! TATAAGCTATGAACTGTTTT+CGG + Chr1:29154887-29154906 None:intergenic 25.0%
!! TCAAGTTTCCAACAAATTTT+GGG + Chr1:29156861-29156880 None:intergenic 25.0%
!! TCATGGATTACCTTATAAAT+TGG - Chr1:29152157-29152176 MsG0180001907.01.T01:intron 25.0%
!! TCATTTTATGTTGCACTAAT+CGG - Chr1:29155795-29155814 MsG0180001907.01.T01:intron 25.0%
!! TCTTTTTCTGTTTCAGAAAT+TGG - Chr1:29151483-29151502 MsG0180001907.01.T01:intron 25.0%
!! TTTGAATTTTCATCATTGAC+AGG - Chr1:29154289-29154308 MsG0180001907.01.T01:CDS 25.0%
!!! AGTTGTATGAACTTTTTTCA+TGG - Chr1:29157470-29157489 MsG0180001907.01.T01:CDS 25.0%
!!! GTAAAAGCATCCAATTTATA+AGG + Chr1:29152170-29152189 None:intergenic 25.0%
!!! GTTTTTTTCATATGCTATCA+TGG - Chr1:29152419-29152438 MsG0180001907.01.T01:intron 25.0%
!!! TACTTTTTGCGACAAAAAAA+TGG - Chr1:29151173-29151192 MsG0180001907.01.T01:intron 25.0%
!!! TATTTTTGTTTGTGAATCCA+TGG + Chr1:29155615-29155634 None:intergenic 25.0%
!!! TCTCTTCCAGTTTTATTTTT+TGG + Chr1:29154044-29154063 None:intergenic 25.0%
!!! TTATTTTTCCTTTGAATGTC+TGG - Chr1:29156804-29156823 MsG0180001907.01.T01:intron 25.0%
AAAGCTAAATTTGGTATGCT+TGG - Chr1:29156473-29156492 MsG0180001907.01.T01:intron 30.0%
AAATAAAGCATGTGAACATG+AGG + Chr1:29156662-29156681 None:intergenic 30.0%
AAATTAGTGTTCTCAAATGG+TGG + Chr1:29156636-29156655 None:intergenic 30.0%
AATCTTGCATAAACTCGTAA+TGG + Chr1:29154695-29154714 None:intergenic 30.0%
ACAATATAACCAGTCACAAT+GGG + Chr1:29154414-29154433 None:intergenic 30.0%
ACTTGAAACTGAAAGAGAAA+AGG - Chr1:29150922-29150941 MsG0180001907.01.T01:CDS 30.0%
AGAGCTTATCCAAATTTAAG+TGG + Chr1:29154483-29154502 None:intergenic 30.0%
AGAGTGAGTGAAAAAAATGA+TGG - Chr1:29152253-29152272 MsG0180001907.01.T01:intron 30.0%
AGCATGTAAAGAAAAAGAAG+AGG + Chr1:29149856-29149875 None:intergenic 30.0%
AGTTAAATGTGGGGAAATAA+GGG - Chr1:29155140-29155159 MsG0180001907.01.T01:intron 30.0%
AGTTTCATACTCATTAGAAC+GGG + Chr1:29151653-29151672 None:intergenic 30.0%
ATATGAGAAAAGAGAAGTGA+AGG + Chr1:29150040-29150059 None:intergenic 30.0%
ATCACTGTGATATACAAAGT+TGG + Chr1:29152936-29152955 None:intergenic 30.0%
ATCCACAATATATTACTGTC+AGG - Chr1:29156113-29156132 MsG0180001907.01.T01:intron 30.0%
ATGCTTCCTATTATCTCTAA+GGG + Chr1:29153561-29153580 None:intergenic 30.0%
ATGTAAAGAAAAAGAAGAGG+TGG + Chr1:29149853-29149872 None:intergenic 30.0%
ATTAAGCTGTTTATCCAACA+AGG + Chr1:29152314-29152333 None:intergenic 30.0%
ATTCAAATGCTTCTATGCTA+TGG - Chr1:29156610-29156629 MsG0180001907.01.T01:intron 30.0%
ATTCAAGTATTTGACCTTGT+TGG + Chr1:29153987-29154006 None:intergenic 30.0%
ATTTCATTTCACCAGAACTT+AGG - Chr1:29155910-29155929 MsG0180001907.01.T01:intron 30.0%
CATCAATTTATGCCTATGAT+GGG - Chr1:29152629-29152648 MsG0180001907.01.T01:intron 30.0%
CCATGGAATAGCAAAATAAA+GGG + Chr1:29155598-29155617 None:intergenic 30.0%
CCATTATCTAATTACCACAA+AGG + Chr1:29151853-29151872 None:intergenic 30.0%
CCTTTGTGGTAATTAGATAA+TGG - Chr1:29151850-29151869 MsG0180001907.01.T01:intron 30.0%
CGGTTTATACTTTATAGTCA+TGG + Chr1:29157525-29157544 None:intergenic 30.0%
CGTGCATAAATGTTTCTTAA+AGG - Chr1:29156206-29156225 MsG0180001907.01.T01:intron 30.0%
CTACATTTAGTACTTCAATC+TGG - Chr1:29156564-29156583 MsG0180001907.01.T01:intron 30.0%
GACAATGCATAATATATGCA+AGG - Chr1:29150472-29150491 MsG0180001907.01.T01:intron 30.0%
GACACATTCTCTAACAAAAA+GGG + Chr1:29153175-29153194 None:intergenic 30.0%
GACTAATTGATGAGATAATG+TGG + Chr1:29151085-29151104 None:intergenic 30.0%
GAGTGAGTGAAAAAAATGAT+GGG - Chr1:29152254-29152273 MsG0180001907.01.T01:intron 30.0%
GATACTTAAGGTAAAAACCA+CGG + Chr1:29156747-29156766 None:intergenic 30.0%
GCAATTGAAATGCTTAAATC+AGG - Chr1:29152746-29152765 MsG0180001907.01.T01:CDS 30.0%
GCTGATGATAAAGCTAAATT+TGG - Chr1:29156464-29156483 MsG0180001907.01.T01:intron 30.0%
GGTATAATGTGAAACATGAT+AGG - Chr1:29153364-29153383 MsG0180001907.01.T01:intron 30.0%
GTATTTCTCCAGAGAAAAAA+GGG - Chr1:29155065-29155084 MsG0180001907.01.T01:intron 30.0%
GTGGATATGTACAACAAAAA+TGG - Chr1:29157240-29157259 MsG0180001907.01.T01:intron 30.0%
GTTTAAACAGAAACTGAGTA+AGG + Chr1:29155518-29155537 None:intergenic 30.0%
TACAATATAACCAGTCACAA+TGG + Chr1:29154415-29154434 None:intergenic 30.0%
TACCTGACAGTAATATATTG+TGG + Chr1:29156118-29156137 None:intergenic 30.0%
TAGTTAAATGTGGGGAAATA+AGG - Chr1:29155139-29155158 MsG0180001907.01.T01:intron 30.0%
TATAAGACGTTTCGTTCAAA+TGG - Chr1:29153290-29153309 MsG0180001907.01.T01:intron 30.0%
TATCACATTATTATCGGTGT+CGG + Chr1:29149914-29149933 None:intergenic 30.0%
TATGCTTCCTATTATCTCTA+AGG + Chr1:29153562-29153581 None:intergenic 30.0%
TATTAAGCGATGGTTGAATT+AGG + Chr1:29151362-29151381 None:intergenic 30.0%
TCATCAATTTATGCCTATGA+TGG - Chr1:29152628-29152647 MsG0180001907.01.T01:intron 30.0%
TCCATGGAATAGCAAAATAA+AGG + Chr1:29155599-29155618 None:intergenic 30.0%
TCTTTGACTCTTAAAGAAGA+AGG - Chr1:29153917-29153936 MsG0180001907.01.T01:intron 30.0%
TGACACATTCTCTAACAAAA+AGG + Chr1:29153176-29153195 None:intergenic 30.0%
TGAGTAAAGTTTACATGACA+TGG + Chr1:29150312-29150331 None:intergenic 30.0%
TGATAAACCGAAACTGAAAT+CGG + Chr1:29152134-29152153 None:intergenic 30.0%
TGATTAAACCAGACATTCAA+AGG + Chr1:29156815-29156834 None:intergenic 30.0%
TGGTATTACTACAGAAAATG+CGG + Chr1:29152003-29152022 None:intergenic 30.0%
TTAAGGTTAGGAGATAATGT+TGG + Chr1:29153123-29153142 None:intergenic 30.0%
TTACACAGACCAAAATTGAT+TGG - Chr1:29151448-29151467 MsG0180001907.01.T01:intron 30.0%
TTGAAACATAAATGGTTGCA+GGG - Chr1:29157182-29157201 MsG0180001907.01.T01:intron 30.0%
TTGATCTCTTCCCTATTTAT+AGG + Chr1:29151889-29151908 None:intergenic 30.0%
TTTAGCTGTTTATCCAAACA+TGG - Chr1:29154999-29155018 MsG0180001907.01.T01:intron 30.0%
TTTCATGGTACACAATACAA+GGG - Chr1:29157485-29157504 MsG0180001907.01.T01:exon 30.0%
TTTCCTGGATTATAGAATAG+TGG + Chr1:29151975-29151994 None:intergenic 30.0%
! AAACATCACAGAATGTTTTC+AGG - Chr1:29153734-29153753 MsG0180001907.01.T01:intron 30.0%
! AAATGGATTTATCTCTCCAT+GGG - Chr1:29156702-29156721 MsG0180001907.01.T01:intron 30.0%
! AACTTAATCCCTACATCTTT+TGG + Chr1:29150523-29150542 None:intergenic 30.0%
! ACAGTGTTATTGATTACGAA+TGG + Chr1:29155465-29155484 None:intergenic 30.0%
! ACTAACAAGGTGATGATTTT+TGG - Chr1:29151038-29151057 MsG0180001907.01.T01:intron 30.0%
! ACTTTTCGCTGTATTATTCA+GGG - Chr1:29156407-29156426 MsG0180001907.01.T01:intron 30.0%
! AGCTTAAAACTGCAGATTTT+TGG - Chr1:29155422-29155441 MsG0180001907.01.T01:intron 30.0%
! ATGGTTTATAAGGGTTTGTT+TGG - Chr1:29154738-29154757 MsG0180001907.01.T01:intron 30.0%
! CAAGTTTCCAACAAATTTTG+GGG + Chr1:29156860-29156879 None:intergenic 30.0%
! CAATGAACAACTCTTTTTGA+AGG + Chr1:29153861-29153880 None:intergenic 30.0%
! CAGATTGAAGTACTAAATGT+AGG + Chr1:29156566-29156585 None:intergenic 30.0%
! CAGTACAATGATCACATTTT+TGG - Chr1:29153813-29153832 MsG0180001907.01.T01:intron 30.0%
! CTAACAAGGTGATGATTTTT+GGG - Chr1:29151039-29151058 MsG0180001907.01.T01:intron 30.0%
! GCTTAAAACTGCAGATTTTT+GGG - Chr1:29155423-29155442 MsG0180001907.01.T01:intron 30.0%
! TAAAATAACGTTTTGCGAAG+AGG - Chr1:29155218-29155237 MsG0180001907.01.T01:intron 30.0%
! TATTTTGTTCTTGAAACGAC+AGG - Chr1:29156259-29156278 MsG0180001907.01.T01:intron 30.0%
! TTAGATGGTGTGATATTTTC+AGG - Chr1:29156033-29156052 MsG0180001907.01.T01:intron 30.0%
! TTGGATAAGCTCTATGTTTT+AGG - Chr1:29154490-29154509 MsG0180001907.01.T01:CDS 30.0%
! TTTGAAACCGATTTCAGTTT+CGG - Chr1:29152124-29152143 MsG0180001907.01.T01:intron 30.0%
! TTTGAATGTCTGGTTTAATC+AGG - Chr1:29156814-29156833 MsG0180001907.01.T01:intron 30.0%
! TTTTCATGGTACACAATACA+AGG - Chr1:29157484-29157503 MsG0180001907.01.T01:exon 30.0%
!! ACATTCTGTGATGTTTTGTT+AGG + Chr1:29153730-29153749 None:intergenic 30.0%
!! TATGTTTTAGGCACAAATTG+TGG - Chr1:29154502-29154521 MsG0180001907.01.T01:CDS 30.0%
!!! AGACTTTTTTATAACCTCCA+TGG - Chr1:29155359-29155378 MsG0180001907.01.T01:intron 30.0%
!!! AGCTGTTTTGACTATACAAA+TGG - Chr1:29155838-29155857 MsG0180001907.01.T01:intron 30.0%
!!! AGTTACTGAATGAGCTTTTT+TGG + Chr1:29154135-29154154 None:intergenic 30.0%
!!! AGTTGTTCATTGTTTTGAAC+TGG - Chr1:29153869-29153888 MsG0180001907.01.T01:intron 30.0%
!!! ATTCTTTCTTGGTTTTTTGG+TGG - Chr1:29151751-29151770 MsG0180001907.01.T01:intron 30.0%
!!! CATTTTTTCAATGGTTTCTC+TGG - Chr1:29151805-29151824 MsG0180001907.01.T01:intron 30.0%
!!! GTCTCTCGTTTTAATTTTTC+AGG + Chr1:29150839-29150858 None:intergenic 30.0%
!!! GTGTAAACTTTGTCATTTTC+TGG + Chr1:29151434-29151453 None:intergenic 30.0%
!!! TTGGAATGTTTTGACTATGT+TGG - Chr1:29154560-29154579 MsG0180001907.01.T01:intron 30.0%
AAAGAAAAAGAAGAGGTGGT+AGG + Chr1:29149849-29149868 None:intergenic 35.0%
AAAGTATGATAGGAACAGAC+TGG + Chr1:29152023-29152042 None:intergenic 35.0%
AAATGTAAAGAATGGCCAAG+AGG + Chr1:29151778-29151797 None:intergenic 35.0%
AAATTGGAACCTGTTGTTCA+TGG - Chr1:29151499-29151518 MsG0180001907.01.T01:intron 35.0%
AACCTTCCCTTAGAGATAAT+AGG - Chr1:29153552-29153571 MsG0180001907.01.T01:intron 35.0%
AACTTTAGTCGGAGAAGAAA+AGG + Chr1:29150993-29151012 None:intergenic 35.0%
AAGAATGCTTGTGCTTTCTT+GGG - Chr1:29150217-29150236 MsG0180001907.01.T01:CDS 35.0%
AATGTGAAGTTAACTTACCG+TGG - Chr1:29156727-29156746 MsG0180001907.01.T01:intron 35.0%
AATTGCAGCATTAAGATCTG+TGG - Chr1:29154453-29154472 MsG0180001907.01.T01:intron 35.0%
ACAAATAACCTGTAGCAAGA+TGG + Chr1:29155717-29155736 None:intergenic 35.0%
ACATCAACCAAATCATTTGC+TGG + Chr1:29155687-29155706 None:intergenic 35.0%
ACTTTAGTCGGAGAAGAAAA+GGG + Chr1:29150992-29151011 None:intergenic 35.0%
AGAAAAAGCCACATCATCAT+CGG - Chr1:29149708-29149727 MsG0180001907.01.T01:three_prime_UTR 35.0%
AGAAAATTGCATTGTGCGAA+TGG - Chr1:29155179-29155198 MsG0180001907.01.T01:intron 35.0%
AGAATAAACCTTCACAGTAG+TGG + Chr1:29154369-29154388 None:intergenic 35.0%
AGAATCCTCCATTTCAAAAC+AGG - Chr1:29150090-29150109 MsG0180001907.01.T01:intron 35.0%
AGGAACTTGTGAAACTGTTA+AGG + Chr1:29152509-29152528 None:intergenic 35.0%
AGGATCTGTAAACGAATTGT+TGG - Chr1:29153937-29153956 MsG0180001907.01.T01:intron 35.0%
AGTCAGAATATACCTTCAAC+AGG + Chr1:29151604-29151623 None:intergenic 35.0%
AGTTAGGCTGCCTATAAATA+GGG - Chr1:29151876-29151895 MsG0180001907.01.T01:intron 35.0%
ATCCATCAAGTTATCCACTT+GGG - Chr1:29150603-29150622 MsG0180001907.01.T01:intron 35.0%
ATGACAGAAACTTTCCTCAA+AGG + Chr1:29155249-29155268 None:intergenic 35.0%
ATTTGTCATGGAGACTGTTA+AGG - Chr1:29156442-29156461 MsG0180001907.01.T01:intron 35.0%
CAATATAACCAGTCACAATG+GGG + Chr1:29154413-29154432 None:intergenic 35.0%
CAGATTCTTCTACACTAGAA+TGG + Chr1:29151137-29151156 None:intergenic 35.0%
CAGTTTCTGTTTAAACTTCC+TGG - Chr1:29155522-29155541 MsG0180001907.01.T01:intron 35.0%
CATAATATATGCAAGGTCTG+GGG - Chr1:29150479-29150498 MsG0180001907.01.T01:intron 35.0%
CATCAACCAAATCATTTGCT+GGG + Chr1:29155686-29155705 None:intergenic 35.0%
CATTCTAGTGTAGAAGAATC+TGG - Chr1:29151135-29151154 MsG0180001907.01.T01:intron 35.0%
CATTTCATTCCCAGTACTAT+TGG + Chr1:29150768-29150787 None:intergenic 35.0%
CGAGTTTATGCAAGATTACA+AGG - Chr1:29154698-29154717 MsG0180001907.01.T01:intron 35.0%
CGCTTGATTATCATACCATT+CGG - Chr1:29157056-29157075 MsG0180001907.01.T01:CDS 35.0%
CTGTTCCTATCATACTTTGA+TGG - Chr1:29152025-29152044 MsG0180001907.01.T01:intron 35.0%
GATGGTTGAATTAGGCATAA+TGG + Chr1:29151354-29151373 None:intergenic 35.0%
GCATAATATATGCAAGGTCT+GGG - Chr1:29150478-29150497 MsG0180001907.01.T01:intron 35.0%
GCATTAAGTCCAATAGTACT+GGG - Chr1:29150756-29150775 MsG0180001907.01.T01:intron 35.0%
GGAACTATTTGTACGTAAAC+CGG - Chr1:29157077-29157096 MsG0180001907.01.T01:CDS 35.0%
GGAGGTTATAAAAAAGTCTG+AGG + Chr1:29155358-29155377 None:intergenic 35.0%
GGTATTTCTCCAGAGAAAAA+AGG - Chr1:29155064-29155083 MsG0180001907.01.T01:intron 35.0%
GTCAGAATATACCTTCAACA+GGG + Chr1:29151603-29151622 None:intergenic 35.0%
GTCTTAGGTTCGATTATCTT+CGG - Chr1:29150675-29150694 MsG0180001907.01.T01:intron 35.0%
GTTGAAACATAAATGGTTGC+AGG - Chr1:29157181-29157200 MsG0180001907.01.T01:intron 35.0%
GTTTCATACTCATTAGAACG+GGG + Chr1:29151652-29151671 None:intergenic 35.0%
GTTTCGGTTTATCAACTTCA+TGG - Chr1:29152140-29152159 MsG0180001907.01.T01:intron 35.0%
TAAAAAAGTCTGAGGACAGT+TGG + Chr1:29155350-29155369 None:intergenic 35.0%
TAAGAATGCTTGTGCTTTCT+TGG - Chr1:29150216-29150235 MsG0180001907.01.T01:CDS 35.0%
TAATCGAACCTAAGACCTTA+AGG + Chr1:29150671-29150690 None:intergenic 35.0%
TACGTACAAATAGTTCCGAA+TGG + Chr1:29157074-29157093 None:intergenic 35.0%
TAGTTAGGCTGCCTATAAAT+AGG - Chr1:29151875-29151894 MsG0180001907.01.T01:intron 35.0%
TATCCATCAAGTTATCCACT+TGG - Chr1:29150602-29150621 MsG0180001907.01.T01:intron 35.0%
TATTCACATAAGCACTTGTG+AGG - Chr1:29154781-29154800 MsG0180001907.01.T01:intron 35.0%
TCAAGCAATGGTAGCATTTA+CGG + Chr1:29152199-29152218 None:intergenic 35.0%
TCTCAGAGAAGTGATTCTAA+AGG - Chr1:29157280-29157299 MsG0180001907.01.T01:intron 35.0%
TCTTCTTCTTCTTCATCACA+AGG - Chr1:29149813-29149832 MsG0180001907.01.T01:three_prime_UTR 35.0%
TGAAATGCTTAAATCAGGCA+TGG - Chr1:29152751-29152770 MsG0180001907.01.T01:CDS 35.0%
TGACGGTGAAGAAATTAGAA+TGG + Chr1:29155983-29156002 None:intergenic 35.0%
TGCATAATATATGCAAGGTC+TGG - Chr1:29150477-29150496 MsG0180001907.01.T01:intron 35.0%
TTAACAGTCTCCATGACAAA+TGG + Chr1:29156443-29156462 None:intergenic 35.0%
TTAGCGTTATGTCAGATGTA+GGG - Chr1:29150417-29150436 MsG0180001907.01.T01:intron 35.0%
TTCATGGTACACAATACAAG+GGG - Chr1:29157486-29157505 MsG0180001907.01.T01:exon 35.0%
TTTGCTTTCTATGTTCAGGT+TGG - Chr1:29157004-29157023 MsG0180001907.01.T01:intron 35.0%
TTTGTTAGGATGCTAGCAAT+GGG + Chr1:29153716-29153735 None:intergenic 35.0%
! AAGCTGTCATTTGTGTACAA+AGG - Chr1:29152777-29152796 MsG0180001907.01.T01:CDS 35.0%
! AGTACTGGGAATGAAATGAA+GGG - Chr1:29150770-29150789 MsG0180001907.01.T01:intron 35.0%
! CTCAATCATTGGTAATTGAC+AGG + Chr1:29154073-29154092 None:intergenic 35.0%
! CTTTTCGCTGTATTATTCAG+GGG - Chr1:29156408-29156427 MsG0180001907.01.T01:intron 35.0%
! CTTTTGCATCAAAGTGAAGA+TGG + Chr1:29157144-29157163 None:intergenic 35.0%
! CTTTTGTTGAGTGTTCTTCT+AGG + Chr1:29153392-29153411 None:intergenic 35.0%
! GAAAGTGCAAAAACAGACTT+AGG + Chr1:29156158-29156177 None:intergenic 35.0%
! GAAATGGATTTATCTCTCCA+TGG - Chr1:29156701-29156720 MsG0180001907.01.T01:intron 35.0%
! GACTTTTCGCTGTATTATTC+AGG - Chr1:29156406-29156425 MsG0180001907.01.T01:intron 35.0%
! GTGTTATTGATTACGAATGG+TGG + Chr1:29155462-29155481 None:intergenic 35.0%
! TAGTACTGGGAATGAAATGA+AGG - Chr1:29150769-29150788 MsG0180001907.01.T01:intron 35.0%
! TATGAACTGTTTTCGGATCT+CGG + Chr1:29154880-29154899 None:intergenic 35.0%
! TGTTTATCCAACAAGGCATT+AGG + Chr1:29152307-29152326 None:intergenic 35.0%
! TTAATCCCTACATCTTTTGG+TGG + Chr1:29150520-29150539 None:intergenic 35.0%
! TTCCTATTATCTCTAAGGGA+AGG + Chr1:29153557-29153576 None:intergenic 35.0%
! TTCTTTTCATAGGAGCTCAA+TGG - Chr1:29152702-29152721 MsG0180001907.01.T01:intron 35.0%
! TTTTACGATGAGACTGTGTT+TGG - Chr1:29152573-29152592 MsG0180001907.01.T01:CDS 35.0%
! TTTTCGCTGTATTATTCAGG+GGG - Chr1:29156409-29156428 MsG0180001907.01.T01:intron 35.0%
! TTTTGTTAGGATGCTAGCAA+TGG + Chr1:29153717-29153736 None:intergenic 35.0%
!! ATTATCTTCGGTGCCAATTT+GGG - Chr1:29150687-29150706 MsG0180001907.01.T01:intron 35.0%
!! TCCTACTATGTTTTTACCCT+TGG + Chr1:29150903-29150922 None:intergenic 35.0%
!! TCTGATCCTTCTTCTTGTTT+TGG - Chr1:29150063-29150082 MsG0180001907.01.T01:intron 35.0%
!!! ATGCTGATTCCGGAATATTT+TGG + Chr1:29156085-29156104 None:intergenic 35.0%
!!! CCCTTTATTTTGCTATTCCA+TGG - Chr1:29155595-29155614 MsG0180001907.01.T01:intron 35.0%
!!! TATCTGTTTTTTCGAGAGAG+AGG + Chr1:29156385-29156404 None:intergenic 35.0%
!!! TCTGTTTTTGCACTTTCTTC+TGG - Chr1:29156161-29156180 MsG0180001907.01.T01:intron 35.0%
AACATGACTATGCCCATCAT+AGG + Chr1:29152644-29152663 None:intergenic 40.0%
AACCCAAGTGGATAACTTGA+TGG + Chr1:29150608-29150627 None:intergenic 40.0%
AACCTTGCTAAAACAGGTCT+GGG + Chr1:29152977-29152996 None:intergenic 40.0%
AACTTGTAGTGAGTCCAACA+AGG - Chr1:29153970-29153989 MsG0180001907.01.T01:intron 40.0%
AAGCACGAATGGATAGAGAA+AGG + Chr1:29149794-29149813 None:intergenic 40.0%
ACAAACCTCAACAAGTGCAA+GGG + Chr1:29153148-29153167 None:intergenic 40.0%
ACACGGACACTCATCAAATT+AGG + Chr1:29149995-29150014 None:intergenic 40.0%
ACCTTAGATGAGACCTACTT+AGG - Chr1:29151541-29151560 MsG0180001907.01.T01:CDS 40.0%
ACTGTCATAACTCTGACTGA+AGG + Chr1:29153797-29153816 None:intergenic 40.0%
AGCACGAATGGATAGAGAAA+GGG + Chr1:29149793-29149812 None:intergenic 40.0%
AGGACTGTCAAATCAAGCAA+TGG + Chr1:29152211-29152230 None:intergenic 40.0%
ATCAAGTTATCCACTTGGGT+TGG - Chr1:29150607-29150626 MsG0180001907.01.T01:intron 40.0%
ATGAGGAACTTCTGTATGCT+CGG - Chr1:29151569-29151588 MsG0180001907.01.T01:CDS 40.0%
ATGCTATCATGGAGAGCTTA+TGG - Chr1:29152430-29152449 MsG0180001907.01.T01:intron 40.0%
ATTGCCTGACGAAAACATTG+TGG + Chr1:29155280-29155299 None:intergenic 40.0%
ATTTGTACGTAAACCGGTTG+TGG - Chr1:29157083-29157102 MsG0180001907.01.T01:CDS 40.0%
CAAAACAGGACTGGAGAAAA+AGG - Chr1:29150104-29150123 MsG0180001907.01.T01:intron 40.0%
CATGCTATGAACCACTGTTA+CGG - Chr1:29149870-29149889 MsG0180001907.01.T01:three_prime_UTR 40.0%
CATTTCACCAGAACTTAGGA+CGG - Chr1:29155914-29155933 MsG0180001907.01.T01:intron 40.0%
CCTTAGATGAGACCTACTTA+GGG - Chr1:29151542-29151561 MsG0180001907.01.T01:CDS 40.0%
CCTTATTCTACAGTGGACAA+CGG - Chr1:29154609-29154628 MsG0180001907.01.T01:intron 40.0%
CGCATTAAGTCCAATAGTAC+TGG - Chr1:29150755-29150774 MsG0180001907.01.T01:intron 40.0%
CGTAGTAGTTAGGAACAGTT+GGG - Chr1:29155092-29155111 MsG0180001907.01.T01:intron 40.0%
CGTTTCGTTCAAATGGATGA+AGG - Chr1:29153297-29153316 MsG0180001907.01.T01:intron 40.0%
CTAACTCATCCTTACAACAC+CGG + Chr1:29150879-29150898 None:intergenic 40.0%
CTGCCACTATTCTATAATCC+AGG - Chr1:29151969-29151988 MsG0180001907.01.T01:intron 40.0%
CTGCTAAAGATCAATGCAGT+CGG - Chr1:29150158-29150177 MsG0180001907.01.T01:CDS 40.0%
CTGCTACCAAAACAAGAAGA+AGG + Chr1:29150072-29150091 None:intergenic 40.0%
CTTAGATGAGACCTACTTAG+GGG - Chr1:29151543-29151562 MsG0180001907.01.T01:CDS 40.0%
CTTGCAAATTCAATGCCCTT+TGG + Chr1:29157031-29157050 None:intergenic 40.0%
GAAAATGCGGAACAATTTCC+TGG + Chr1:29151990-29152009 None:intergenic 40.0%
GAACCTTCCTTATTCTACAG+TGG - Chr1:29154602-29154621 MsG0180001907.01.T01:intron 40.0%
GACATTGAAACCTTACTCCA+AGG + Chr1:29152280-29152299 None:intergenic 40.0%
GAGAAAAGAGAAGTGAAGGA+AGG + Chr1:29150036-29150055 None:intergenic 40.0%
GATGAAGGTTACAATCCACT+CGG - Chr1:29153312-29153331 MsG0180001907.01.T01:intron 40.0%
GCCAAGGGTAAAAACATAGT+AGG - Chr1:29150899-29150918 MsG0180001907.01.T01:intron 40.0%
GGTAGCAGAGCTATTCATTT+GGG - Chr1:29150578-29150597 MsG0180001907.01.T01:intron 40.0%
GGTTCTCTGCTGAAAAATCA+TGG - Chr1:29154719-29154738 MsG0180001907.01.T01:intron 40.0%
GTACTATTGGACTTAATGCG+TGG + Chr1:29150755-29150774 None:intergenic 40.0%
GTAGTAGTTAGGAACAGTTG+GGG - Chr1:29155093-29155112 MsG0180001907.01.T01:intron 40.0%
GTCAAAACTTTGTCTCTAGC+TGG - Chr1:29157399-29157418 MsG0180001907.01.T01:intron 40.0%
GTTAACTTCACATTCTCCCA+TGG + Chr1:29156721-29156740 None:intergenic 40.0%
GTTAGCGTTATGTCAGATGT+AGG - Chr1:29150416-29150435 MsG0180001907.01.T01:intron 40.0%
GTTTCTCTGGTATGTGACAT+TGG - Chr1:29151818-29151837 MsG0180001907.01.T01:intron 40.0%
TAAACCGCAATTGACAACAC+TGG + Chr1:29156591-29156610 None:intergenic 40.0%
TAAGCTATCATGTAACGCCA+TGG + Chr1:29155408-29155427 None:intergenic 40.0%
TCATCAAATTAGGCATGTCC+TGG + Chr1:29149985-29150004 None:intergenic 40.0%
TCGTAGTAGTTAGGAACAGT+TGG - Chr1:29155091-29155110 MsG0180001907.01.T01:intron 40.0%
TGTCCACTGTAGAATAAGGA+AGG + Chr1:29154608-29154627 None:intergenic 40.0%
TTATTGCTCCATCTTGCTAC+AGG - Chr1:29155706-29155725 MsG0180001907.01.T01:CDS 40.0%
TTCTGTTTAAACTTCCTGGC+AGG - Chr1:29155526-29155545 MsG0180001907.01.T01:intron 40.0%
TTGTTAGGATGCTAGCAATG+GGG + Chr1:29153715-29153734 None:intergenic 40.0%
TTTGCTGGGAGACAGAAATA+AGG + Chr1:29155672-29155691 None:intergenic 40.0%
TTTGTACGTAAACCGGTTGT+GGG - Chr1:29157084-29157103 MsG0180001907.01.T01:CDS 40.0%
! ACTACCACAATGTTTTCGTC+AGG - Chr1:29155273-29155292 MsG0180001907.01.T01:intron 40.0%
! AGAAGAAGAAGAAGCACGAA+TGG + Chr1:29149805-29149824 None:intergenic 40.0%
! ATCAATTAGTCTGCACCTAG+TGG - Chr1:29151094-29151113 MsG0180001907.01.T01:intron 40.0%
! GACTGCATTGATCTTTAGCA+GGG + Chr1:29150159-29150178 None:intergenic 40.0%
! GACTTGGTCGTTGGATATAT+GGG - Chr1:29156055-29156074 MsG0180001907.01.T01:intron 40.0%
! GTTCACTTGAAGCATTTGGA+CGG - Chr1:29155548-29155567 MsG0180001907.01.T01:intron 40.0%
! TAATACCCTTGCACTTGTTG+AGG - Chr1:29153140-29153159 MsG0180001907.01.T01:intron 40.0%
! TCGTAATGGAGAACTGTTTC+TGG + Chr1:29154681-29154700 None:intergenic 40.0%
! TCTCTTTTCAATGCGAGACT+CGG + Chr1:29150811-29150830 None:intergenic 40.0%
! TGGCTTTGCTTTCTATGTTC+AGG - Chr1:29157000-29157019 MsG0180001907.01.T01:intron 40.0%
! TGTCTGGTTTAATCAGGAAG+AGG - Chr1:29156820-29156839 MsG0180001907.01.T01:intron 40.0%
! TGTGGAGCACCACTTAAATT+TGG - Chr1:29154471-29154490 MsG0180001907.01.T01:CDS 40.0%
! TGTGTTTAGAGTCACGAGTT+TGG - Chr1:29155745-29155764 MsG0180001907.01.T01:CDS 40.0%
! TTGAAAGAATACGTGCCGTT+TGG - Chr1:29151917-29151936 MsG0180001907.01.T01:intron 40.0%
!! AGTGCAAGGGTATTAAGGTT+AGG + Chr1:29153135-29153154 None:intergenic 40.0%
!! ATGTTGTGTCATGCTGATTC+CGG + Chr1:29156095-29156114 None:intergenic 40.0%
!! CAACAAGTGCAAGGGTATTA+AGG + Chr1:29153140-29153159 None:intergenic 40.0%
!! GATTATCTTCGGTGCCAATT+TGG - Chr1:29150686-29150705 MsG0180001907.01.T01:intron 40.0%
!! GGTGTGATATTTTCAGGACT+TGG - Chr1:29156039-29156058 MsG0180001907.01.T01:intron 40.0%
!! GTGAAAAAAATGATGGGCCT+TGG - Chr1:29152260-29152279 MsG0180001907.01.T01:intron 40.0%
!! TATGTTCAGGTTGGTCCAAA+GGG - Chr1:29157013-29157032 MsG0180001907.01.T01:CDS 40.0%
!! TATTTTCAGGACTTGGTCGT+TGG - Chr1:29156046-29156065 MsG0180001907.01.T01:intron 40.0%
!! TCTAGGGTGTTGTAGTGAAT+TGG - Chr1:29153343-29153362 MsG0180001907.01.T01:intron 40.0%
!!! AGATTTTTGGGTTTCCTCCA+TGG - Chr1:29155435-29155454 MsG0180001907.01.T01:intron 40.0%
!!! TCTCCAGTCCTGTTTTGAAA+TGG + Chr1:29150101-29150120 None:intergenic 40.0%
!!! TTTCCAACAAATTTTGGGGC+AGG + Chr1:29156856-29156875 None:intergenic 40.0%
AAACTTATCCAGTCCTTCCC+TGG + Chr1:29154637-29154656 None:intergenic 45.0%
AAAGATCAATGCAGTCGGTG+TGG - Chr1:29150163-29150182 MsG0180001907.01.T01:CDS 45.0%
AAAGGGAGCTCGTAGTAGTT+AGG - Chr1:29155082-29155101 MsG0180001907.01.T01:intron 45.0%
AACCAGTCACAATGGGGAAA+GGG + Chr1:29154407-29154426 None:intergenic 45.0%
AATGCTCTAGTGACTAGCGT+AGG - Chr1:29153604-29153623 MsG0180001907.01.T01:intron 45.0%
AATTAGGCATGTCCTGGACA+CGG + Chr1:29149979-29149998 None:intergenic 45.0%
AGAATAGTGGCAGACCTTTG+AGG + Chr1:29151962-29151981 None:intergenic 45.0%
AGAGACACTCCTCATCTTAG+AGG - Chr1:29150853-29150872 MsG0180001907.01.T01:intron 45.0%
ATGCTCCTCCTTAAGGTCTT+AGG - Chr1:29150660-29150679 MsG0180001907.01.T01:intron 45.0%
ATGGGCGTGCCAAAATATTC+CGG - Chr1:29156073-29156092 MsG0180001907.01.T01:intron 45.0%
ATTGGTAGGTAACCCCTTTG+TGG - Chr1:29151836-29151855 MsG0180001907.01.T01:intron 45.0%
CAACCTTCACAAATTGGCCA+TGG + Chr1:29155379-29155398 None:intergenic 45.0%
CAACCTTGCTAAAACAGGTC+TGG + Chr1:29152978-29152997 None:intergenic 45.0%
CACAAACCTCAACAAGTGCA+AGG + Chr1:29153149-29153168 None:intergenic 45.0%
CATGGCCAATTTGTGAAGGT+TGG - Chr1:29155377-29155396 MsG0180001907.01.T01:intron 45.0%
CCCTAAGTAGGTCTCATCTA+AGG + Chr1:29151545-29151564 None:intergenic 45.0%
CCGTTGTCCACTGTAGAATA+AGG + Chr1:29154612-29154631 None:intergenic 45.0%
CCTCCATTTCAAAACAGGAC+TGG - Chr1:29150095-29150114 MsG0180001907.01.T01:intron 45.0%
CGGAAACTTAACCCTGTTGA+AGG - Chr1:29151589-29151608 MsG0180001907.01.T01:intron 45.0%
CGGTAGCAGAGCTATTCATT+TGG - Chr1:29150577-29150596 MsG0180001907.01.T01:intron 45.0%
CTAAACTAGCCCACCCAAAT+TGG + Chr1:29150703-29150722 None:intergenic 45.0%
CTCTGGTATGTGACATTGGT+AGG - Chr1:29151822-29151841 MsG0180001907.01.T01:intron 45.0%
CTGTCTCCCAGCAAATGATT+TGG - Chr1:29155677-29155696 MsG0180001907.01.T01:CDS 45.0%
CTTCCTCTACCATGAACAAC+AGG + Chr1:29151511-29151530 None:intergenic 45.0%
GAACCTGTTGTTCATGGTAG+AGG - Chr1:29151505-29151524 MsG0180001907.01.T01:intron 45.0%
GAAGAAGTGATGGCTGCTAA+AGG - Chr1:29153090-29153109 MsG0180001907.01.T01:intron 45.0%
GAAGCCAACCTTGCTAAAAC+AGG + Chr1:29152983-29153002 None:intergenic 45.0%
GAATAGTGGCAGACCTTTGA+GGG + Chr1:29151961-29151980 None:intergenic 45.0%
GCACGAATGGATAGAGAAAG+GGG + Chr1:29149792-29149811 None:intergenic 45.0%
GCTGTATTATTCAGGGGGAT+AGG - Chr1:29156414-29156433 MsG0180001907.01.T01:intron 45.0%
GGACACCACCAAAAGATGTA+GGG - Chr1:29150512-29150531 MsG0180001907.01.T01:intron 45.0%
GGAGGCCATCAAAGTATGAT+AGG + Chr1:29152033-29152052 None:intergenic 45.0%
GGATTACATGCTCCAATCAG+TGG - Chr1:29157301-29157320 MsG0180001907.01.T01:intron 45.0%
GTAAGGATGAGTTAGGCCAA+GGG - Chr1:29150884-29150903 MsG0180001907.01.T01:intron 45.0%
GTCAATGCCTAATGCCTTGT+TGG - Chr1:29152297-29152316 MsG0180001907.01.T01:intron 45.0%
GTGGGGAAATAAGGGTAGAA+AGG - Chr1:29155148-29155167 MsG0180001907.01.T01:intron 45.0%
TAAATGGTTGCAGGGCTGAT+AGG - Chr1:29157190-29157209 MsG0180001907.01.T01:intron 45.0%
TAACCAGTCACAATGGGGAA+AGG + Chr1:29154408-29154427 None:intergenic 45.0%
TCGAACCTAAGACCTTAAGG+AGG + Chr1:29150668-29150687 None:intergenic 45.0%
TCTTCCAAAACCAGGGAAAC+CGG + Chr1:29153690-29153709 None:intergenic 45.0%
TGAAACGACAGGAATGAACG+TGG - Chr1:29156270-29156289 MsG0180001907.01.T01:intron 45.0%
TGCATGCAGACTATGCAACA+CGG + Chr1:29150012-29150031 None:intergenic 45.0%
TGGACCAGTGTTGTCAATTG+CGG - Chr1:29156584-29156603 MsG0180001907.01.T01:intron 45.0%
TGTAAGGATGAGTTAGGCCA+AGG - Chr1:29150883-29150902 MsG0180001907.01.T01:intron 45.0%
TGTTAGGATGCTAGCAATGG+GGG + Chr1:29153714-29153733 None:intergenic 45.0%
TTAGCAGCCATCACTTCTTC+TGG + Chr1:29153090-29153109 None:intergenic 45.0%
TTCATAGGAGCTCAATGGAC+TGG - Chr1:29152707-29152726 MsG0180001907.01.T01:intron 45.0%
TTCCTCATAGACCCCTAAGT+AGG + Chr1:29151557-29151576 None:intergenic 45.0%
TTCGGATCTCGGAAAGCTTA+TGG + Chr1:29154869-29154888 None:intergenic 45.0%
TTGAAGGACCAGATGCTCTT+AGG + Chr1:29153845-29153864 None:intergenic 45.0%
TTGGAGTATGCTCCTCCTTA+AGG - Chr1:29150653-29150672 MsG0180001907.01.T01:intron 45.0%
TTGTACGTAAACCGGTTGTG+GGG - Chr1:29157085-29157104 MsG0180001907.01.T01:CDS 45.0%
TTTCATCATTGACAGGCTGC+AGG - Chr1:29154296-29154315 MsG0180001907.01.T01:CDS 45.0%
TTTGGACGGTCGTATTGAAG+AGG - Chr1:29155562-29155581 MsG0180001907.01.T01:intron 45.0%
! CGACTGCATTGATCTTTAGC+AGG + Chr1:29150160-29150179 None:intergenic 45.0%
! CGTCTTCTTTTCTGTGGTGT+AGG - Chr1:29154326-29154345 MsG0180001907.01.T01:intron 45.0%
! CTCTTTTCAATGCGAGACTC+GGG + Chr1:29150810-29150829 None:intergenic 45.0%
! GCAGGTTCACTTGAAGCATT+TGG - Chr1:29155544-29155563 MsG0180001907.01.T01:intron 45.0%
! GCATTGATCTTTAGCAGGGT+AGG + Chr1:29150155-29150174 None:intergenic 45.0%
! GGACTTGGTCGTTGGATATA+TGG - Chr1:29156054-29156073 MsG0180001907.01.T01:intron 45.0%
! GTCAAGCGTCTTCTTTTCTG+TGG - Chr1:29154320-29154339 MsG0180001907.01.T01:intron 45.0%
! TGTGCTTAGCTCAGTTGGTA+AGG - Chr1:29150450-29150469 MsG0180001907.01.T01:intron 45.0%
! TTAAGGAGGAGCATACTCCA+AGG + Chr1:29150654-29150673 None:intergenic 45.0%
!! AAATGATGGGCCTTGGAGTA+AGG - Chr1:29152267-29152286 MsG0180001907.01.T01:intron 45.0%
!! AATACGTGCCGTTTGGCATT+GGG - Chr1:29151924-29151943 MsG0180001907.01.T01:intron 45.0%
!! CGGTGTTGTAAGGATGAGTT+AGG - Chr1:29150877-29150896 MsG0180001907.01.T01:intron 45.0%
!! CTACTCTCTAGAGCCATGTT+TGG + Chr1:29155015-29155034 None:intergenic 45.0%
!! CTATGTTCAGGTTGGTCCAA+AGG - Chr1:29157012-29157031 MsG0180001907.01.T01:CDS 45.0%
!! TGATTACGAATGGTGGACCA+TGG + Chr1:29155455-29155474 None:intergenic 45.0%
!!! CAGACCTGTTTTAGCAAGGT+TGG - Chr1:29152976-29152995 MsG0180001907.01.T01:intron 45.0%
!!! CCAGTCCTGTTTTGAAATGG+AGG + Chr1:29150098-29150117 None:intergenic 45.0%
!!! CTACATCTTTTGGTGGTGTC+CGG + Chr1:29150513-29150532 None:intergenic 45.0%
!!! TACATCTTTTGGTGGTGTCC+GGG + Chr1:29150512-29150531 None:intergenic 45.0%
!!! TACGAGCTCCCTTTTTTCTC+TGG + Chr1:29155076-29155095 None:intergenic 45.0%
!!! TGGTTTTTTGGTGGACCTCT+TGG - Chr1:29151760-29151779 MsG0180001907.01.T01:intron 45.0%
!! GAATTATAAAAAAAATAATA+CGG - Chr1:29150557-29150576 MsG0180001907.01.T01:intron 5.0%
ACACTCCTCATCTTAGAGGC+CGG - Chr1:29150857-29150876 MsG0180001907.01.T01:intron 50.0%
ACAGCTCCTGCTTGAAGGAA+AGG - Chr1:29150964-29150983 MsG0180001907.01.T01:CDS 50.0%
ACCTTTCCTTTCCCCACAAC+CGG + Chr1:29157099-29157118 None:intergenic 50.0%
AGCCACATCATCATCGGTGT+TGG - Chr1:29149714-29149733 MsG0180001907.01.T01:three_prime_UTR 50.0%
AGGGTTCCTTTCCTTCAAGC+AGG + Chr1:29150973-29150992 None:intergenic 50.0%
ATGCTTCAAGTGAACCTGCC+AGG + Chr1:29155543-29155562 None:intergenic 50.0%
ATGGGGGATCTTCCAAAACC+AGG + Chr1:29153698-29153717 None:intergenic 50.0%
CAGCCTGCCCCAAAATTTGT+TGG - Chr1:29156850-29156869 MsG0180001907.01.T01:intron 50.0%
CAGGACACCAGAAGAAGTGA+TGG - Chr1:29153080-29153099 MsG0180001907.01.T01:intron 50.0%
CATGCTCCAATCAGTGGCAT+AGG - Chr1:29157307-29157326 MsG0180001907.01.T01:intron 50.0%
CCTCCATGGCCAATTTGTGA+AGG - Chr1:29155373-29155392 MsG0180001907.01.T01:intron 50.0%
CCTTCACAAATTGGCCATGG+AGG + Chr1:29155376-29155395 None:intergenic 50.0%
CCTTCACAGTAGTGGTACCT+TGG + Chr1:29154361-29154380 None:intergenic 50.0%
CGCAGCCAACCTTCACAAAT+TGG + Chr1:29155385-29155404 None:intergenic 50.0%
CGGACACCACCAAAAGATGT+AGG - Chr1:29150511-29150530 MsG0180001907.01.T01:intron 50.0%
GAAGGTTACAATCCACTCGG+CGG - Chr1:29153315-29153334 MsG0180001907.01.T01:intron 50.0%
GACCTACTTAGGGGTCTATG+AGG - Chr1:29151552-29151571 MsG0180001907.01.T01:CDS 50.0%
GCGAAGAGGAAAGACCTTTG+AGG - Chr1:29155232-29155251 MsG0180001907.01.T01:intron 50.0%
GCTTGTGCTTTCTTGGGAGA+TGG - Chr1:29150223-29150242 MsG0180001907.01.T01:CDS 50.0%
GGATAGGCGACCATTTGTCA+TGG - Chr1:29156430-29156449 MsG0180001907.01.T01:intron 50.0%
GTCACAATGGGGAAAGGGAA+AGG + Chr1:29154402-29154421 None:intergenic 50.0%
GTCTGTGTGCTTAGCTCAGT+TGG - Chr1:29150445-29150464 MsG0180001907.01.T01:intron 50.0%
TACAGTGGACAACGGAACCA+GGG - Chr1:29154617-29154636 MsG0180001907.01.T01:intron 50.0%
TGAACCACTGTTACGGACAC+CGG - Chr1:29149877-29149896 MsG0180001907.01.T01:three_prime_UTR 50.0%
TGGGGGATCTTCCAAAACCA+GGG + Chr1:29153697-29153716 None:intergenic 50.0%
TTCCCTTTCCCCATTGTGAC+TGG - Chr1:29154402-29154421 MsG0180001907.01.T01:intron 50.0%
TTTCTGTGGTGTAGGTTGCC+AGG - Chr1:29154334-29154353 MsG0180001907.01.T01:intron 50.0%
! AGCCAACACCGATGATGATG+TGG + Chr1:29149719-29149738 None:intergenic 50.0%
! CAATCCGGTTTCCCTGGTTT+TGG - Chr1:29153683-29153702 MsG0180001907.01.T01:intron 50.0%
! CCAAGGTACCACTACTGTGA+AGG - Chr1:29154358-29154377 MsG0180001907.01.T01:intron 50.0%
! GTGGTGTTAACGTGAGACCT+TGG - Chr1:29150634-29150653 MsG0180001907.01.T01:intron 50.0%
!! ATACGTGCCGTTTGGCATTG+GGG - Chr1:29151925-29151944 MsG0180001907.01.T01:intron 50.0%
!! ATCTTCGGTGCCAATTTGGG+TGG - Chr1:29150690-29150709 MsG0180001907.01.T01:intron 50.0%
!! GAATACGTGCCGTTTGGCAT+TGG - Chr1:29151923-29151942 MsG0180001907.01.T01:intron 50.0%
!! GGACATTGCCTAAGAGCATC+TGG - Chr1:29153834-29153853 MsG0180001907.01.T01:intron 50.0%
!! GTTATCCACTTGGGTTGGTC+TGG - Chr1:29150612-29150631 MsG0180001907.01.T01:intron 50.0%
!! TCTTAGAGGCCGGTGTTGTA+AGG - Chr1:29150867-29150886 MsG0180001907.01.T01:intron 50.0%
!! TCTTCGGTGCCAATTTGGGT+GGG - Chr1:29150691-29150710 MsG0180001907.01.T01:intron 50.0%
!! TTACGAATGGTGGACCATGG+AGG + Chr1:29155452-29155471 None:intergenic 50.0%
!!! ACAAATTTTGGGGCAGGCTG+AGG + Chr1:29156850-29156869 None:intergenic 50.0%
!!! ACATCTTTTGGTGGTGTCCG+GGG + Chr1:29150511-29150530 None:intergenic 50.0%
!!! CTCCCAGACCTGTTTTAGCA+AGG - Chr1:29152972-29152991 MsG0180001907.01.T01:intron 50.0%
AACTCGGCCGTCCTAAGTTC+TGG + Chr1:29155924-29155943 None:intergenic 55.0%
ACCGGTTGTGGGGAAAGGAA+AGG - Chr1:29157095-29157114 MsG0180001907.01.T01:CDS 55.0%
AGGTCAAAGCCTATCCCACC+AGG - Chr1:29150124-29150143 MsG0180001907.01.T01:intron 55.0%
CAGTAGTGGTACCTTGGACC+TGG + Chr1:29154355-29154374 None:intergenic 55.0%
CCACTCGGCGGTTCTTTCTA+GGG - Chr1:29153327-29153346 MsG0180001907.01.T01:intron 55.0%
CGTAAACCGGTTGTGGGGAA+AGG - Chr1:29157090-29157109 MsG0180001907.01.T01:CDS 55.0%
CTACAGTGGACAACGGAACC+AGG - Chr1:29154616-29154635 MsG0180001907.01.T01:intron 55.0%
CTGGGAGCAAATCTGTCGTC+AGG + Chr1:29152959-29152978 None:intergenic 55.0%
GCACAACAGCTCCTGCTTGA+AGG - Chr1:29150959-29150978 MsG0180001907.01.T01:CDS 55.0%
GGCACACCTATGCCACTGAT+TGG + Chr1:29157316-29157335 None:intergenic 55.0%
GTCTGAGGACAGTTGGCAAG+AGG + Chr1:29155343-29155362 None:intergenic 55.0%
TAGGTTCCACCTGGTGGGAT+AGG + Chr1:29150136-29150155 None:intergenic 55.0%
TCAAAGCCTATCCCACCAGG+TGG - Chr1:29150127-29150146 MsG0180001907.01.T01:intron 55.0%
TCCACTCGGCGGTTCTTTCT+AGG - Chr1:29153326-29153345 MsG0180001907.01.T01:intron 55.0%
TTAGCAGGGTAGGTTCCACC+TGG + Chr1:29150145-29150164 None:intergenic 55.0%
!! ATCCACTTGGGTTGGTCTGG+TGG - Chr1:29150615-29150634 MsG0180001907.01.T01:intron 55.0%
!! CAACACCGGCCTCTAAGATG+AGG + Chr1:29150865-29150884 None:intergenic 55.0%
!! TACGTGCCGTTTGGCATTGG+GGG - Chr1:29151926-29151945 MsG0180001907.01.T01:intron 55.0%
!!! AATTTTGGGGCAGGCTGAGG+AGG + Chr1:29156847-29156866 None:intergenic 55.0%
CAACGGAACCAGGGAAGGAC+TGG - Chr1:29154626-29154645 MsG0180001907.01.T01:intron 60.0%
CACCACCAGACCAACCCAAG+TGG + Chr1:29150620-29150639 None:intergenic 60.0%
CAGGGTAGGTTCCACCTGGT+GGG + Chr1:29150141-29150160 None:intergenic 60.0%
CCCTAGAAAGAACCGCCGAG+TGG + Chr1:29153330-29153349 None:intergenic 60.0%
GGCGAACAATCCGGTTTCCC+TGG - Chr1:29153677-29153696 MsG0180001907.01.T01:intron 60.0%
GGTGTAGGTTGCCAGGTCCA+AGG - Chr1:29154341-29154360 MsG0180001907.01.T01:intron 60.0%
GTGGACAACGGAACCAGGGA+AGG - Chr1:29154621-29154640 MsG0180001907.01.T01:intron 60.0%
GTGTCCGGTGTCCGTAACAG+TGG + Chr1:29149884-29149903 None:intergenic 60.0%
! AAGGTCTGGGGTTCGAACCC+CGG - Chr1:29150491-29150510 MsG0180001907.01.T01:intron 60.0%
! TGTGAAGGTTGGCTGCGCCA+TGG - Chr1:29155388-29155407 MsG0180001907.01.T01:intron 60.0%
!! ACGTGCCGTTTGGCATTGGG+GGG - Chr1:29151927-29151946 MsG0180001907.01.T01:intron 60.0%
GCAGGGTAGGTTCCACCTGG+TGG + Chr1:29150142-29150161 None:intergenic 65.0%
GGGGGCGGGAAAACCCTCAA+AGG - Chr1:29151945-29151964 MsG0180001907.01.T01:intron 65.0%
TCCCGCCCCCCAATGCCAAA+CGG + Chr1:29151935-29151954 None:intergenic 65.0%
TCGGCGTCGTATCCGTGTCC+AGG - Chr1:29149964-29149983 MsG0180001907.01.T01:exon 65.0%
! TGCCGTTTGGCATTGGGGGG+CGG - Chr1:29151930-29151949 MsG0180001907.01.T01:intron 65.0%
!! GGTGTCGGCGCGTTAGTGTC+CGG + Chr1:29149899-29149918 None:intergenic 65.0%
! GCCGTTTGGCATTGGGGGGC+GGG - Chr1:29151931-29151950 MsG0180001907.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 29149671 29157597 29149671 ID=MsG0180001907.01;Name=MsG0180001907.01
Chr1 mRNA 29149671 29157597 29149671 ID=MsG0180001907.01.T01;Parent=MsG0180001907.01;Name=MsG0180001907.01.T01;_AED=0.43;_eAED=0.44;_QI=97|0.86|0.93|1|1|1|16|304|415
Chr1 exon 29149671 29150065 29149671 ID=MsG0180001907.01.T01:exon:18944;Parent=MsG0180001907.01.T01
Chr1 exon 29150152 29150246 29150152 ID=MsG0180001907.01.T01:exon:18943;Parent=MsG0180001907.01.T01
Chr1 exon 29150368 29150432 29150368 ID=MsG0180001907.01.T01:exon:18942;Parent=MsG0180001907.01.T01
Chr1 exon 29150783 29150840 29150783 ID=MsG0180001907.01.T01:exon:18941;Parent=MsG0180001907.01.T01
Chr1 exon 29150918 29150987 29150918 ID=MsG0180001907.01.T01:exon:18940;Parent=MsG0180001907.01.T01
Chr1 exon 29151541 29151602 29151541 ID=MsG0180001907.01.T01:exon:18939;Parent=MsG0180001907.01.T01
Chr1 exon 29151685 29151720 29151685 ID=MsG0180001907.01.T01:exon:18938;Parent=MsG0180001907.01.T01
Chr1 exon 29152549 29152646 29152549 ID=MsG0180001907.01.T01:exon:18937;Parent=MsG0180001907.01.T01
Chr1 exon 29152745 29152807 29152745 ID=MsG0180001907.01.T01:exon:18936;Parent=MsG0180001907.01.T01
Chr1 exon 29152906 29152957 29152906 ID=MsG0180001907.01.T01:exon:18935;Parent=MsG0180001907.01.T01
Chr1 exon 29154107 29154185 29154107 ID=MsG0180001907.01.T01:exon:18934;Parent=MsG0180001907.01.T01
Chr1 exon 29154275 29154316 29154275 ID=MsG0180001907.01.T01:exon:18933;Parent=MsG0180001907.01.T01
Chr1 exon 29154470 29154554 29154470 ID=MsG0180001907.01.T01:exon:18932;Parent=MsG0180001907.01.T01
Chr1 exon 29155658 29155769 29155658 ID=MsG0180001907.01.T01:exon:18931;Parent=MsG0180001907.01.T01
Chr1 exon 29157007 29157179 29157007 ID=MsG0180001907.01.T01:exon:18930;Parent=MsG0180001907.01.T01
Chr1 exon 29157434 29157597 29157434 ID=MsG0180001907.01.T01:exon:18929;Parent=MsG0180001907.01.T01
Chr1 five_prime_UTR 29157501 29157597 29157501 ID=MsG0180001907.01.T01:five_prime_utr;Parent=MsG0180001907.01.T01
Chr1 CDS 29157434 29157500 29157434 ID=MsG0180001907.01.T01:cds;Parent=MsG0180001907.01.T01
Chr1 CDS 29157007 29157179 29157007 ID=MsG0180001907.01.T01:cds;Parent=MsG0180001907.01.T01
Chr1 CDS 29155658 29155769 29155658 ID=MsG0180001907.01.T01:cds;Parent=MsG0180001907.01.T01
Chr1 CDS 29154470 29154554 29154470 ID=MsG0180001907.01.T01:cds;Parent=MsG0180001907.01.T01
Chr1 CDS 29154275 29154316 29154275 ID=MsG0180001907.01.T01:cds;Parent=MsG0180001907.01.T01
Chr1 CDS 29154107 29154185 29154107 ID=MsG0180001907.01.T01:cds;Parent=MsG0180001907.01.T01
Chr1 CDS 29152906 29152957 29152906 ID=MsG0180001907.01.T01:cds;Parent=MsG0180001907.01.T01
Chr1 CDS 29152745 29152807 29152745 ID=MsG0180001907.01.T01:cds;Parent=MsG0180001907.01.T01
Chr1 CDS 29152549 29152646 29152549 ID=MsG0180001907.01.T01:cds;Parent=MsG0180001907.01.T01
Chr1 CDS 29151685 29151720 29151685 ID=MsG0180001907.01.T01:cds;Parent=MsG0180001907.01.T01
Chr1 CDS 29151541 29151602 29151541 ID=MsG0180001907.01.T01:cds;Parent=MsG0180001907.01.T01
Chr1 CDS 29150918 29150987 29150918 ID=MsG0180001907.01.T01:cds;Parent=MsG0180001907.01.T01
Chr1 CDS 29150783 29150840 29150783 ID=MsG0180001907.01.T01:cds;Parent=MsG0180001907.01.T01
Chr1 CDS 29150368 29150432 29150368 ID=MsG0180001907.01.T01:cds;Parent=MsG0180001907.01.T01
Chr1 CDS 29150152 29150246 29150152 ID=MsG0180001907.01.T01:cds;Parent=MsG0180001907.01.T01
Chr1 CDS 29149975 29150065 29149975 ID=MsG0180001907.01.T01:cds;Parent=MsG0180001907.01.T01
Chr1 three_prime_UTR 29149671 29149974 29149671 ID=MsG0180001907.01.T01:three_prime_utr;Parent=MsG0180001907.01.T01
Gene Sequence

>MsG0180001907.01.T01

ATGTCTTCTTTCTCTTCGCTACCCCTTTCTCTATCCATTCGTGCTTCTTCTTCTTCTTCATCACAAGCAGAATCCTCCATTTCAAAACAGGACTGGAGAAAAAGGTCAAAGCCTATCCCACCAGGTGGAACCTACCCTGCTAAAGATCAATGCAGTCGGTGTGGATTGTGTGATACATATTATATTGCTCATGTTAAGAATGCTTGTGCTTTCTTGGGAGATGGAATGTCTAAAATTGAAAAATTGGAACCTGTTGTTCATGGTAGAGGAAGAAAAACTGATACCTTAGATGAGACCTACTTAGGGGTCTATGAGGAACTTCTGTATGCTCGGAAACTTAACCCTGTTGAAGGAGCTCAATGGACTGGTATAGTAACAACCATTGCAATTGAAATGCTTAAATCAGGCATGGTTGAAGCTGTCATTTGTGTACAAAGTGATCCTGACGACAGATTTGCTCCCAGACCTGTTTTAGCAAGGACACCAGAAGAAGTGATGGCTGCTAAAGGCGTCAAGCCAACATTATCTCCTAACCTTAATACCCTTGCACTTGTTGAGGCTGCAGGTGTCAAGCGTCTTCTTTTCTGTGGTGTAGGTTGCCAGGTCCAAGCATTAAGATCTGTGGAGCACCACTTAAATTTGGATAAGCTCTATGTTTTAGGCACAAATTGTGTGGACAACGGAACCAGGGAAGGACTGGATAAGTTTCTAAATGCTGCGAGTGATTCACCAGAAACAGTTCTCCATTACGAGTTTATGCAAGATTACAAGGTTCACTTGAAGCATTTGGACGGTCGTATTGAAGAGGTTCCTTATTTCTGTCTCCCAGCAAATGATTTGGTTGATGTTATTGCTCCATCTTGCTACAGGAATGAACGTGGAAGAGAGATGATGAGTCTTGTAAAGAACTTACTAGAGATTACTCCAACAGTTAATTCAGGGGATAGGCGACCATTTGTCATGGAGACTGTTAAGGCTGATGATAAAGCTAAATTTGGAAGAGGTCCTCCTCAGCCTGCCCCAAAATTTGTTGGAAACTTGATTGCATTTTTACTAAATTTGGTTGGTCCAAAGGGCATTGAATTTGCAAGATACTCGCTTGATTATCATACCATTCGGAACTATTTGTACGTAAACCGGTTGTGGGGAAAGGAAAGGGCTGATAGGCACATGCCTTCATATGCTAAGAAAATTGTGGATATGTACAACAAAAATGGTGAAATTGAAAAGATGCTCTCAGAGAAGTGA

Protein sequence

>MsG0180001907.01.T01

MSSFSSLPLSLSIRASSSSSSQAESSISKQDWRKRSKPIPPGGTYPAKDQCSRCGLCDTYYIAHVKNACAFLGDGMSKIEKLEPVVHGRGRKTDTLDETYLGVYEELLYARKLNPVEGAQWTGIVTTIAIEMLKSGMVEAVICVQSDPDDRFAPRPVLARTPEEVMAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLDKLYVLGTNCVDNGTREGLDKFLNAASDSPETVLHYEFMQDYKVHLKHLDGRIEEVPYFCLPANDLVDVIAPSCYRNERGREMMSLVKNLLEITPTVNSGDRRPFVMETVKADDKAKFGRGPPQPAPKFVGNLIAFLLNLVGPKGIEFARYSLDYHTIRNYLYVNRLWGKERADRHMPSYAKKIVDMYNKNGEIEKMLSEK*