AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580025589.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025589.01.T01 MTR_5g030950 99.614 518 2 0 1 518 1 518 0.0 1071
MsG0580025589.01.T01 MTR_5g067060 83.721 516 75 1 3 518 1 507 0.0 896
MsG0580025589.01.T01 MTR_2g018290 59.607 458 176 2 52 508 83 532 0.0 571
MsG0580025589.01.T01 MTR_8g081510 58.369 466 187 4 53 516 9 469 0.0 557
MsG0580025589.01.T01 MTR_3g084310 58.584 466 186 4 53 516 9 469 0.0 555
MsG0580025589.01.T01 MTR_2g006570 54.140 471 201 6 47 510 130 592 5.76e-173 501
MsG0580025589.01.T01 MTR_3g073470 53.291 471 202 6 46 509 116 575 2.22e-170 493
MsG0580025589.01.T01 MTR_3g084310 63.068 352 128 2 53 402 9 360 3.13e-161 462
MsG0580025589.01.T01 MTR_2g006570 53.991 426 184 5 92 510 1 421 3.81e-157 454
MsG0580025589.01.T01 MTR_7g108420 51.963 433 176 6 83 509 3 409 2.36e-148 431
MsG0580025589.01.T01 MTR_1g073580 40.278 144 85 1 359 501 83 226 9.72e-27 108
MsG0580025589.01.T01 MTR_1g073580 52.273 88 37 2 200 287 1 83 9.24e-19 86.3
MsG0580025589.01.T01 MTR_3g062030 52.041 98 35 2 296 393 1 86 5.78e-22 95.1
MsG0580025589.01.T01 MTR_7g070020 53.659 82 28 2 378 452 1 79 2.78e-21 89.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025589.01.T01 AT4G37930 88.760 516 57 1 1 516 1 515 0.0 967
MsG0580025589.01.T01 AT5G26780 85.106 517 76 1 3 518 1 517 0.0 922
MsG0580025589.01.T01 AT5G26780 85.106 517 76 1 3 518 1 517 0.0 922
MsG0580025589.01.T01 AT5G26780 82.739 533 75 2 3 518 1 533 0.0 914
MsG0580025589.01.T01 AT5G26780 82.739 533 75 2 3 518 1 533 0.0 914
MsG0580025589.01.T01 AT4G32520 58.551 497 188 6 22 508 40 528 0.0 600
MsG0580025589.01.T01 AT4G32520 58.551 497 188 6 22 508 40 528 0.0 600
MsG0580025589.01.T01 AT4G13930 58.155 466 188 4 53 516 9 469 0.0 553
MsG0580025589.01.T01 AT4G13890 56.209 459 194 4 53 509 9 462 0.0 527
MsG0580025589.01.T01 AT4G13890 59.008 383 155 2 53 433 9 391 1.49e-165 474
MsG0580025589.01.T01 AT1G36370 49.797 492 230 6 21 504 106 588 1.20e-164 480
MsG0580025589.01.T01 AT1G22020 49.393 494 235 6 24 510 113 598 9.26e-164 478
MsG0580025589.01.T01 AT1G22020 49.393 494 235 6 24 510 113 598 9.26e-164 478

Find 133 sgRNAs with CRISPR-Local

Find 267 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCATGATAGCTTCTGAAAA+TGG 0.216084 5:+20921762 None:intergenic
AAAGGCTACGAGCTTGTTTC+TGG 0.219481 5:-20923375 MsG0580025589.01.T01:CDS
CTATGGTTCCTGGTGGTATC+AGG 0.288605 5:-20922967 MsG0580025589.01.T01:CDS
ATTTATTGAACAAAATAAAA+AGG 0.290520 5:-20926793 MsG0580025589.01.T01:five_prime_UTR
CCTCACAACCATACCATTAC+TGG 0.309322 5:-20923857 MsG0580025589.01.T01:CDS
TATCCTGGAGCAAGATATTA+TGG 0.327289 5:-20925550 MsG0580025589.01.T01:CDS
ACTTTCATTTGGGTCCTGTT+TGG 0.327982 5:-20921895 MsG0580025589.01.T01:three_prime_UTR
GTTCAATAAATACTATGATT+TGG 0.331496 5:+20926805 None:intergenic
ATGCTTCCAAGGCACGCTTC+TGG 0.331989 5:+20925350 None:intergenic
GAATTTGGCTTTGAAGATTA+AGG 0.334937 5:-20922782 MsG0580025589.01.T01:CDS
TCAATAATATCAGCAATTTC+AGG 0.336823 5:+20926222 None:intergenic
CAAAGAGAATTCACGTGTTT+CGG 0.355000 5:-20926457 MsG0580025589.01.T01:intron
AGCAGTGATGTTAGCAGATA+TGG 0.355451 5:-20924287 MsG0580025589.01.T01:CDS
ATCTATGTTCAGGGTATTGA+TGG 0.357287 5:-20923064 MsG0580025589.01.T01:intron
GTGCTTTCATCCAATCTATA+TGG 0.358204 5:+20924680 None:intergenic
TGAGACAATGCCATATAGAT+TGG 0.372179 5:-20924690 MsG0580025589.01.T01:CDS
GACTGAGAATCATCTAGTTT+TGG 0.372451 5:-20923349 MsG0580025589.01.T01:CDS
AGAAATCGGCTACCCTCTTC+AGG 0.373752 5:-20924527 MsG0580025589.01.T01:CDS
GATGTGTCTGCTATGGTTCC+TGG 0.383585 5:-20922977 MsG0580025589.01.T01:CDS
GCACCGGCAACGATTAGTTT+TGG 0.388490 5:+20924504 None:intergenic
AGGACGTGAAGATTTGTTGA+TGG 0.388675 5:+20926671 None:intergenic
AGTGGAGAATTCAATTGCTT+TGG 0.389470 5:+20926258 None:intergenic
TGTGTTCTTACCTCCCCATT+TGG 0.391821 5:+20925312 None:intergenic
TAAAATGCAGCTAGAGAAAT+CGG 0.393588 5:-20924541 MsG0580025589.01.T01:intron
GTGAGGACCACCTTGCAGTC+CGG 0.400928 5:+20923874 None:intergenic
TTGCAGGCTCTGAGTGATAA+AGG 0.410789 5:-20923393 MsG0580025589.01.T01:intron
GTGGAGCTATGATCTTCTTC+AGG 0.420209 5:-20924165 MsG0580025589.01.T01:CDS
AAATACAGTGAAGGTTATCC+TGG 0.420592 5:-20925565 MsG0580025589.01.T01:CDS
TTCGGTTGGATCCGGCCAAA+TGG 0.423259 5:-20925327 MsG0580025589.01.T01:CDS
GTTATAATTATTTATTGAAG+TGG 0.424646 5:-20926842 MsG0580025589.01.T01:five_prime_UTR
CTCAACATCATGACGAAGCT+TGG 0.426845 5:+20922558 None:intergenic
TTGTCATACACAGCTTCATC+AGG 0.428660 5:+20926477 None:intergenic
ATGAAGTTGCTTATCCAAAC+AGG 0.429118 5:+20921881 None:intergenic
TCGGTTGGATCCGGCCAAAT+GGG 0.432543 5:-20925326 MsG0580025589.01.T01:CDS
TATAGCAGATGAAAAGCATT+AGG 0.436447 5:-20922053 MsG0580025589.01.T01:three_prime_UTR
GGAAGCATTTCGGTTGGATC+CGG 0.437681 5:-20925335 MsG0580025589.01.T01:CDS
AGCGTGCCTTGGAAGCATTT+CGG 0.443631 5:-20925345 MsG0580025589.01.T01:CDS
AGGCCAAAACTAATCGTTGC+CGG 0.443935 5:-20924507 MsG0580025589.01.T01:CDS
TGAGGACCACCTTGCAGTCC+GGG 0.446833 5:+20923875 None:intergenic
TCAAAGATGAGATAGATAGA+TGG 0.449040 5:+20926732 None:intergenic
GAACTCCTGCTCTTACTTCA+AGG 0.449715 5:-20922858 MsG0580025589.01.T01:CDS
TTCTTACCTCCCCATTTGGC+CGG 0.455832 5:+20925316 None:intergenic
GCAAAACAATTTCCAACCAT+TGG 0.456150 5:-20922529 MsG0580025589.01.T01:CDS
CTGTCTGTTATGCAAGCTGT+TGG 0.464480 5:-20925604 MsG0580025589.01.T01:CDS
GTGAACGTGCAGCCTTTGTC+TGG 0.476132 5:-20925059 MsG0580025589.01.T01:CDS
TGTTGAGGAGGATTTCGTTA+AGG 0.476445 5:-20922830 MsG0580025589.01.T01:CDS
AATCTTCAAAGCCAAATTCA+CGG 0.477918 5:+20922786 None:intergenic
ACCATAGCAGACACATCTCC+TGG 0.483784 5:+20922983 None:intergenic
CCTCCATAATATCTTGCTCC+AGG 0.489580 5:+20925547 None:intergenic
GTAATTAGGAACAAAATTGA+AGG 0.489988 5:-20922629 MsG0580025589.01.T01:intron
TGCCTTGGAAGCATTTCGGT+TGG 0.492777 5:-20925341 MsG0580025589.01.T01:CDS
GAAAACTGAAAGTTTCCATC+AGG 0.492837 5:-20922472 MsG0580025589.01.T01:intron
CAAGGTATTCTATGACTATG+AGG 0.498000 5:-20923921 MsG0580025589.01.T01:intron
ACAACTCACAAGTCACTTCG+TGG 0.499970 5:-20924193 MsG0580025589.01.T01:CDS
TCTTGGTATGCTTTATACTC+TGG 0.501564 5:+20923558 None:intergenic
ACAACATCTGCATAATCAAA+AGG 0.506100 5:+20924223 None:intergenic
TACTTCAAGGGGATTTGTTG+AGG 0.510009 5:-20922845 MsG0580025589.01.T01:CDS
TTTAGCCGTTGCATTGAAGC+AGG 0.511025 5:-20923834 MsG0580025589.01.T01:intron
GGTTCCTGGTGGTATCAGGA+TGG 0.513253 5:-20922963 MsG0580025589.01.T01:CDS
CAAGCTTCGTCATGATGTTG+AGG 0.517604 5:-20922557 MsG0580025589.01.T01:CDS
TGCTTCTTCTGTTTACTACA+AGG 0.517801 5:-20926640 MsG0580025589.01.T01:intron
AATCTCTGATTGCACGTATG+AGG 0.517892 5:+20922582 None:intergenic
GCAATTGAATTCTCCACTTG+AGG 0.521875 5:-20926253 MsG0580025589.01.T01:CDS
GCAGATGAAAAGCATTAGGC+TGG 0.522187 5:-20922049 MsG0580025589.01.T01:three_prime_UTR
GGCTACGAGCTTGTTTCTGG+TGG 0.524277 5:-20923372 MsG0580025589.01.T01:CDS
TCAGGATCAATTTCCTCAAG+TGG 0.525701 5:+20926240 None:intergenic
CTTTGAGATGGCAATGGCAA+TGG 0.531762 5:-20926715 MsG0580025589.01.T01:exon
CGGCTAAACCAGTAATGGTA+TGG 0.535787 5:+20923849 None:intergenic
GTATAAAGCATACCAAGAGC+AGG 0.537001 5:-20923553 MsG0580025589.01.T01:CDS
GGCAGTGGTGGTAAAGACTA+TGG 0.540392 5:-20922129 MsG0580025589.01.T01:intron
ATGGCACTTGATCTCCCTCA+TGG 0.541789 5:-20924981 MsG0580025589.01.T01:CDS
GTTCCTGGTGGTATCAGGAT+GGG 0.544981 5:-20922962 MsG0580025589.01.T01:intron
AAGATTAAGGCAGAGAGCAA+AGG 0.545858 5:-20922769 MsG0580025589.01.T01:intron
CAATAAATACTATGATTTGG+TGG 0.546160 5:+20926808 None:intergenic
CATGGAGGGCATCTTTCTCA+TGG 0.546204 5:-20924963 MsG0580025589.01.T01:CDS
AGTCAACAAACAAGGAAAAG+AGG 0.546341 5:-20924128 MsG0580025589.01.T01:intron
TCCAGGAGATGTGTCTGCTA+TGG 0.549009 5:-20922984 MsG0580025589.01.T01:CDS
AATTGCTGAGAACCTGCTCT+TGG 0.549215 5:+20923541 None:intergenic
ATCAGTGGATTGGTTGCAGC+TGG 0.550002 5:-20924259 MsG0580025589.01.T01:CDS
ACTATGCCAGAAGCGTGCCT+TGG 0.551575 5:-20925356 MsG0580025589.01.T01:CDS
GCATCTTTCTCATGGATACC+AGG 0.551757 5:-20924955 MsG0580025589.01.T01:intron
ATTTACCTGCTTCAATGCAA+CGG 0.554999 5:+20923829 None:intergenic
GCTATGATCTTCTTCAGGAA+GGG 0.555906 5:-20924160 MsG0580025589.01.T01:CDS
CACTTGATCTCCCTCATGGA+GGG 0.558609 5:-20924977 MsG0580025589.01.T01:CDS
AACTCCTGCTCTTACTTCAA+GGG 0.559611 5:-20922857 MsG0580025589.01.T01:CDS
CGGTTGGATCCGGCCAAATG+GGG 0.560369 5:-20925325 MsG0580025589.01.T01:CDS
CAATTGCGCAAAATTTGCAC+AGG 0.560674 5:-20923523 MsG0580025589.01.T01:intron
GTGTAAACATGAAAATTTGA+AGG 0.561653 5:+20925032 None:intergenic
TTCCAACACCTTCTCAACTC+TGG 0.563616 5:+20923039 None:intergenic
TATGGCACACATCAGTGGAT+TGG 0.566378 5:-20924269 MsG0580025589.01.T01:CDS
TGAGAAAGCTAGACAATGGA+AGG 0.567432 5:-20926196 MsG0580025589.01.T01:intron
TATCTATCTCATCTTTGAGA+TGG 0.568176 5:-20926727 MsG0580025589.01.T01:exon
TATAGATTGGATGAAAGCAC+AGG 0.570064 5:-20924677 MsG0580025589.01.T01:CDS
TCTGCATAATCAAAAGGTGA+AGG 0.572432 5:+20924229 None:intergenic
TTTCTGATTAATGGAAGAGG+AGG 0.573198 5:-20922082 MsG0580025589.01.T01:three_prime_UTR
AGCTATGATCTTCTTCAGGA+AGG 0.578607 5:-20924161 MsG0580025589.01.T01:CDS
GAAACCTCACGATAGAATCA+TGG 0.579825 5:-20925000 MsG0580025589.01.T01:CDS
TTTGGTGAATCTTAAGAACA+AGG 0.582102 5:-20923331 MsG0580025589.01.T01:intron
TTCAAGGGGATTTGTTGAGG+AGG 0.584041 5:-20922842 MsG0580025589.01.T01:CDS
TTATTTCAGGTATATTGACA+TGG 0.584453 5:-20925386 MsG0580025589.01.T01:intron
CTCCAGAGTTGAGAAGGTGT+TGG 0.584928 5:-20923041 MsG0580025589.01.T01:CDS
CAATGGCAATGGCTCTTCGT+AGG 0.584959 5:-20926704 MsG0580025589.01.T01:CDS
TGATGGCTCCAGAGTTGAGA+AGG 0.585979 5:-20923047 MsG0580025589.01.T01:CDS
AATCCCCTTGAAGTAAGAGC+AGG 0.586622 5:+20922853 None:intergenic
ATCCAACCGAAATGCTTCCA+AGG 0.593144 5:+20925339 None:intergenic
ACGAAGTGACTTGTGAGTTG+TGG 0.594647 5:+20924195 None:intergenic
ACTCCTGCTCTTACTTCAAG+GGG 0.596470 5:-20922856 MsG0580025589.01.T01:CDS
CTGCATAATCAAAAGGTGAA+GGG 0.596849 5:+20924230 None:intergenic
GCTACGAGCTTGTTTCTGGT+GGG 0.597003 5:-20923371 MsG0580025589.01.T01:CDS
CCAGTAATGGTATGGTTGTG+AGG 0.597553 5:+20923857 None:intergenic
TGCAACGGCTAAACCAGTAA+TGG 0.601482 5:+20923844 None:intergenic
TTGGATCCGGCCAAATGGGG+AGG 0.604501 5:-20925322 MsG0580025589.01.T01:intron
GCAGATATGGCACACATCAG+TGG 0.610027 5:-20924274 MsG0580025589.01.T01:CDS
TCTCATCTTTGAGATGGCAA+TGG 0.611876 5:-20926721 MsG0580025589.01.T01:exon
TGATTATGCACGCATACGCA+AGG 0.616148 5:-20924460 MsG0580025589.01.T01:intron
ACGTGCATAGGCACTAGCAC+CGG 0.616352 5:+20924488 None:intergenic
GAGAAAGATGCCCTCCATGA+GGG 0.620869 5:+20924967 None:intergenic
AGCTTGAGAAAGCTAGACAA+TGG 0.621507 5:-20926200 MsG0580025589.01.T01:CDS
ATAATCATACAGACGTGCAT+AGG 0.625798 5:+20924476 None:intergenic
ATGACAAACAAATACAGTGA+AGG 0.630108 5:-20925574 MsG0580025589.01.T01:CDS
ACAGAAGAAGCACTGAAGAG+AGG 0.631325 5:+20926651 None:intergenic
TTTGAAGGTGAACCAGACAA+AGG 0.639590 5:+20925047 None:intergenic
TTGAAAGAAGTCAACAAACA+AGG 0.646425 5:-20924136 MsG0580025589.01.T01:CDS
GCACTTGATCTCCCTCATGG+AGG 0.656008 5:-20924978 MsG0580025589.01.T01:CDS
ATACCCATCCTGATACCACC+AGG 0.659126 5:+20922959 None:intergenic
AAGTCACTTCGTGGACCACG+TGG 0.667056 5:-20924184 MsG0580025589.01.T01:CDS
AGTGCCATGATTCTATCGTG+AGG 0.668000 5:+20924996 None:intergenic
TGAGAAAGATGCCCTCCATG+AGG 0.670790 5:+20924966 None:intergenic
AGGATACATTGATTATGACC+AGG 0.672531 5:-20924657 MsG0580025589.01.T01:intron
GAGGACCACCTTGCAGTCCG+GGG 0.687646 5:+20923876 None:intergenic
CCTGGAGCAAGATATTATGG+AGG 0.697681 5:-20925547 MsG0580025589.01.T01:CDS
GTGTCTGCTATGGTTCCTGG+TGG 0.714961 5:-20922974 MsG0580025589.01.T01:CDS
AAGAAGATCATAGCTCCACG+TGG 0.778572 5:+20924169 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTATTGAACAAAATAAAA+AGG - Chr5:20921864-20921883 MsG0580025589.01.T01:three_prime_UTR 10.0%
!! AAAAAGAGATATGTTATTAA+TGG + Chr5:20922142-20922161 None:intergenic 15.0%
!! CTGAATAATATTATTAAAGT+GGG - Chr5:20925549-20925568 MsG0580025589.01.T01:CDS 15.0%
!! GTTATAATTATTTATTGAAG+TGG - Chr5:20921815-20921834 MsG0580025589.01.T01:three_prime_UTR 15.0%
!! TAAAACAAAAGTAAAATGAA+TGG + Chr5:20924875-20924894 None:intergenic 15.0%
!! TCTGAATAATATTATTAAAG+TGG - Chr5:20925548-20925567 MsG0580025589.01.T01:CDS 15.0%
!! TGTTTGTCTTTAATAATTTA+TGG - Chr5:20923166-20923185 MsG0580025589.01.T01:intron 15.0%
!! TTAATGATTATTTACATGTT+TGG - Chr5:20922259-20922278 MsG0580025589.01.T01:intron 15.0%
!! TTATAATAGGAAATGAAATA+TGG + Chr5:20923740-20923759 None:intergenic 15.0%
!! TTGTAGATTTCATTTATAAT+AGG + Chr5:20923753-20923772 None:intergenic 15.0%
!!! AATTTGTGATTTCTTTTTAA+TGG - Chr5:20924277-20924296 MsG0580025589.01.T01:CDS 15.0%
!!! ATTTTATATTAAAGAGAACT+TGG - Chr5:20922972-20922991 MsG0580025589.01.T01:CDS 15.0%
!!! TAAATTTTGGTTATATGTTT+TGG - Chr5:20922341-20922360 MsG0580025589.01.T01:intron 15.0%
!!! TTATATTTTTAGCTTAACAA+GGG - Chr5:20924956-20924975 MsG0580025589.01.T01:CDS 15.0%
!!! TTTATATTTTTAGCTTAACA+AGG - Chr5:20924955-20924974 MsG0580025589.01.T01:intron 15.0%
!! AAATCTACGATTTAATAGTA+CGG + Chr5:20922661-20922680 None:intergenic 20.0%
!! AAGATGCAAAAGATTAATAA+CGG + Chr5:20922768-20922787 None:intergenic 20.0%
!! AAGTATAAATCAATCAAAAG+AGG + Chr5:20923866-20923885 None:intergenic 20.0%
!! AAGTATAATATCACTTGTTT+GGG - Chr5:20923410-20923429 MsG0580025589.01.T01:intron 20.0%
!! AATAACATTAAATATGTTGC+AGG - Chr5:20925248-20925267 MsG0580025589.01.T01:intron 20.0%
!! AATTCTTCTTACTTATTTCA+AGG - Chr5:20924718-20924737 MsG0580025589.01.T01:CDS 20.0%
!! ATACTAAATTTCTCGTATTA+AGG - Chr5:20922931-20922950 MsG0580025589.01.T01:intron 20.0%
!! ATATAACAAACACAAAAGAA+GGG + Chr5:20925931-20925950 None:intergenic 20.0%
!! GGAAAAACAAAAGATATTAT+CGG + Chr5:20925056-20925075 None:intergenic 20.0%
!! GTTCAATAAATACTATGATT+TGG + Chr5:20921855-20921874 None:intergenic 20.0%
!! TGATTGTGTGTTATAATATT+TGG - Chr5:20922876-20922895 MsG0580025589.01.T01:intron 20.0%
!! TTTCAAAAAATCTATGTTCA+GGG - Chr5:20925584-20925603 MsG0580025589.01.T01:CDS 20.0%
!!! AAACTTTGAAGTGTAAATTT+TGG - Chr5:20922328-20922347 MsG0580025589.01.T01:intron 20.0%
!!! AATATGTTATTTTTTTGCAG+TGG - Chr5:20922376-20922395 MsG0580025589.01.T01:intron 20.0%
!!! AATGTTTTCAACTTTCATTT+GGG - Chr5:20926752-20926771 MsG0580025589.01.T01:five_prime_UTR 20.0%
!!! ACTTGGTTGTTTTATTATTT+TGG - Chr5:20922989-20923008 MsG0580025589.01.T01:CDS 20.0%
!!! ATGTATATATTTGTTGAACA+TGG - Chr5:20922548-20922567 MsG0580025589.01.T01:CDS 20.0%
!!! TATATTTTTAGCTTAACAAG+GGG - Chr5:20924957-20924976 MsG0580025589.01.T01:CDS 20.0%
!!! TGTTTTATTATTTTGGTGAA+GGG - Chr5:20922996-20923015 MsG0580025589.01.T01:CDS 20.0%
!!! TTAGAGATAATTTTGTAATC+TGG - Chr5:20922634-20922653 MsG0580025589.01.T01:intron 20.0%
!!! TTGTTTTATTATTTTGGTGA+AGG - Chr5:20922995-20923014 MsG0580025589.01.T01:CDS 20.0%
!!! TTTTATTCTTTAAGTCCAAA+TGG - Chr5:20923220-20923239 MsG0580025589.01.T01:intron 20.0%
! AGATGCAAAAGATTAATAAC+GGG + Chr5:20922767-20922786 None:intergenic 25.0%
! ATCAAGAAAAAATTAGACAG+TGG + Chr5:20924904-20924923 None:intergenic 25.0%
! ATCATATTTCAACTTACAAC+AGG - Chr5:20924331-20924350 MsG0580025589.01.T01:intron 25.0%
! ATTTAAATTGAATTGTGTCC+AGG + Chr5:20924569-20924588 None:intergenic 25.0%
! CAAGTATAATATCACTTGTT+TGG - Chr5:20923409-20923428 MsG0580025589.01.T01:intron 25.0%
! GATAATTAGTCATTTCATGT+CGG + Chr5:20925458-20925477 None:intergenic 25.0%
! GATATAACAAACACAAAAGA+AGG + Chr5:20925932-20925951 None:intergenic 25.0%
! GTAATTAGGAACAAAATTGA+AGG - Chr5:20926028-20926047 MsG0580025589.01.T01:intron 25.0%
! GTGTAAACATGAAAATTTGA+AGG + Chr5:20923628-20923647 None:intergenic 25.0%
! GTTTCAAAAAATCTATGTTC+AGG - Chr5:20925583-20925602 MsG0580025589.01.T01:CDS 25.0%
! TCAATAATATCAGCAATTTC+AGG + Chr5:20922438-20922457 None:intergenic 25.0%
! TCCTAATTACAAAAGTTCAT+CGG + Chr5:20926018-20926037 None:intergenic 25.0%
! TGGACACAATTCAATTTAAA+TGG - Chr5:20924568-20924587 MsG0580025589.01.T01:intron 25.0%
! TTGTTTACATTGTAAGTTCA+TGG - Chr5:20924674-20924693 MsG0580025589.01.T01:CDS 25.0%
!! AGAAATCACAAATTCTAAGA+AGG + Chr5:20924271-20924290 None:intergenic 25.0%
!! CAATAAATACTATGATTTGG+TGG + Chr5:20921852-20921871 None:intergenic 25.0%
!! CAATGTTTTCAACTTTCATT+TGG - Chr5:20926751-20926770 MsG0580025589.01.T01:five_prime_UTR 25.0%
!! GAAGAATTAGTATCTCTTTT+TGG + Chr5:20924706-20924725 None:intergenic 25.0%
!! TATTTACATGTTTGGAATCA+CGG - Chr5:20922267-20922286 MsG0580025589.01.T01:intron 25.0%
!! TGATCAGTTTTTCTGATTAA+TGG - Chr5:20926566-20926585 MsG0580025589.01.T01:intron 25.0%
!! TTATTTCAGGTATATTGACA+TGG - Chr5:20923271-20923290 MsG0580025589.01.T01:intron 25.0%
!!! ACAAGACTTAACTTTTTTGT+AGG + Chr5:20924658-20924677 None:intergenic 25.0%
!!! ATCTTTTGTTTTTCCTTTTG+TGG - Chr5:20925061-20925080 MsG0580025589.01.T01:CDS 25.0%
!!! GTTTTATTATTTTGGTGAAG+GGG - Chr5:20922997-20923016 MsG0580025589.01.T01:CDS 25.0%
!!! TTTGACTTTTCATATAAGCA+TGG - Chr5:20925364-20925383 MsG0580025589.01.T01:CDS 25.0%
AATCTTCAAAGCCAAATTCA+CGG + Chr5:20925874-20925893 None:intergenic 30.0%
AATGAGTTAATCAATCTCTG+TGG + Chr5:20925220-20925239 None:intergenic 30.0%
ACAACATCTGCATAATCAAA+AGG + Chr5:20924437-20924456 None:intergenic 30.0%
ACTAGTAATCTGTTAACCTT+TGG - Chr5:20926362-20926381 MsG0580025589.01.T01:intron 30.0%
ATAACACACAATCAAACAGT+TGG + Chr5:20922870-20922889 None:intergenic 30.0%
ATATTATTAAAGTGGGACTG+AGG - Chr5:20925556-20925575 MsG0580025589.01.T01:CDS 30.0%
ATCAGAAAAACTGATCACAT+TGG + Chr5:20926563-20926582 None:intergenic 30.0%
ATGACAAACAAATACAGTGA+AGG - Chr5:20923083-20923102 MsG0580025589.01.T01:intron 30.0%
ATTAGAAACGAGAACAATGT+TGG - Chr5:20925160-20925179 MsG0580025589.01.T01:intron 30.0%
CACAACAATAGTTTCTTTGT+TGG - Chr5:20923364-20923383 MsG0580025589.01.T01:CDS 30.0%
CATATTCACTGATAAGTAAG+TGG - Chr5:20922573-20922592 MsG0580025589.01.T01:CDS 30.0%
GATGCAAAAGATTAATAACG+GGG + Chr5:20922766-20922785 None:intergenic 30.0%
TAAAATGCAGCTAGAGAAAT+CGG - Chr5:20924116-20924135 MsG0580025589.01.T01:intron 30.0%
TCAAAGATGAGATAGATAGA+TGG + Chr5:20921928-20921947 None:intergenic 30.0%
TCAAGTCAGTATCAAAAACA+TGG + Chr5:20924999-20925018 None:intergenic 30.0%
TCATTAACTTCGATTCCATT+TGG + Chr5:20923238-20923257 None:intergenic 30.0%
TCTACAATAGATGTAAGCAT+TGG - Chr5:20923766-20923785 MsG0580025589.01.T01:intron 30.0%
TTGAAAGAAGTCAACAAACA+AGG - Chr5:20924521-20924540 MsG0580025589.01.T01:CDS 30.0%
TTGCATAAATGTATACCTGA+TGG + Chr5:20926203-20926222 None:intergenic 30.0%
TTTGGTGAATCTTAAGAACA+AGG - Chr5:20925326-20925345 MsG0580025589.01.T01:CDS 30.0%
! ACCGATGAACTTTTGTAATT+AGG - Chr5:20926014-20926033 MsG0580025589.01.T01:intron 30.0%
! AGACAATGGAAGGTATATAT+AGG - Chr5:20922471-20922490 MsG0580025589.01.T01:intron 30.0%
! GTTTTTCTGATTAATGGAAG+AGG - Chr5:20926572-20926591 MsG0580025589.01.T01:intron 30.0%
! TATCTATCTCATCTTTGAGA+TGG - Chr5:20921930-20921949 MsG0580025589.01.T01:three_prime_UTR 30.0%
! TTTCAAAAGCTTTTCAGTCT+TGG + Chr5:20926444-20926463 None:intergenic 30.0%
!! ATATGGAAGTTGATATTACC+TGG + Chr5:20923723-20923742 None:intergenic 30.0%
!! GAATTTGGCTTTGAAGATTA+AGG - Chr5:20925875-20925894 MsG0580025589.01.T01:intron 30.0%
!! GATTTTTCAAAACCAATGGT+TGG + Chr5:20926143-20926162 None:intergenic 30.0%
!! GCTTGATTTTTCAAAACCAA+TGG + Chr5:20926147-20926166 None:intergenic 30.0%
!! TATAGCAGATGAAAAGCATT+AGG - Chr5:20926604-20926623 MsG0580025589.01.T01:intron 30.0%
!! TTGTGCATCTTTGTTATTTC+AGG - Chr5:20923258-20923277 MsG0580025589.01.T01:intron 30.0%
AAAGAAACTGCAAACATACC+TGG + Chr5:20924021-20924040 None:intergenic 35.0%
AAATACAGTGAAGGTTATCC+TGG - Chr5:20923092-20923111 MsG0580025589.01.T01:intron 35.0%
AAATTCAGAACTTCCACCAA+AGG + Chr5:20926381-20926400 None:intergenic 35.0%
AATCAGCAATGAACATGCTA+AGG - Chr5:20923477-20923496 MsG0580025589.01.T01:intron 35.0%
ACCAGACATGAAACTCAATA+CGG + Chr5:20924607-20924626 None:intergenic 35.0%
AGTAATCTGTTAACCTTTGG+TGG - Chr5:20926365-20926384 MsG0580025589.01.T01:intron 35.0%
AGTCAACAAACAAGGAAAAG+AGG - Chr5:20924529-20924548 MsG0580025589.01.T01:CDS 35.0%
AGTGGAGAATTCAATTGCTT+TGG + Chr5:20922402-20922421 None:intergenic 35.0%
ATAATCATACAGACGTGCAT+AGG + Chr5:20924184-20924203 None:intergenic 35.0%
ATCAGAGACGTAGACATTAT+TGG - Chr5:20922735-20922754 MsG0580025589.01.T01:intron 35.0%
ATCTTAAGAACAAGGTAACC+TGG - Chr5:20925334-20925353 MsG0580025589.01.T01:CDS 35.0%
ATGAAGTTGCTTATCCAAAC+AGG + Chr5:20926779-20926798 None:intergenic 35.0%
ATTATCTCTAAACCATACCG+TGG + Chr5:20922625-20922644 None:intergenic 35.0%
ATTTACCTGCTTCAATGCAA+CGG + Chr5:20924831-20924850 None:intergenic 35.0%
CAAAGAGAATTCACGTGTTT+CGG - Chr5:20922200-20922219 MsG0580025589.01.T01:intron 35.0%
CAGATAGTACAACACAATTG+AGG + Chr5:20926291-20926310 None:intergenic 35.0%
CTGCATAATCAAAAGGTGAA+GGG + Chr5:20924430-20924449 None:intergenic 35.0%
GAAAACTGAAAGTTTCCATC+AGG - Chr5:20926185-20926204 MsG0580025589.01.T01:intron 35.0%
GAGGATTCATGACTAAGTAA+AGG + Chr5:20923847-20923866 None:intergenic 35.0%
GCAAAACAATTTCCAACCAT+TGG - Chr5:20926128-20926147 MsG0580025589.01.T01:intron 35.0%
GCTAATAAAAACACTGTTCC+AGG - Chr5:20925656-20925675 MsG0580025589.01.T01:intron 35.0%
GTGCTTTCATCCAATCTATA+TGG + Chr5:20923980-20923999 None:intergenic 35.0%
TACGTCAGAGAATAATCTAG+TGG + Chr5:20926493-20926512 None:intergenic 35.0%
TATCCTGGAGCAAGATATTA+TGG - Chr5:20923107-20923126 MsG0580025589.01.T01:intron 35.0%
TCTGCATAATCAAAAGGTGA+AGG + Chr5:20924431-20924450 None:intergenic 35.0%
TCTTGGTATGCTTTATACTC+TGG + Chr5:20925102-20925121 None:intergenic 35.0%
TGAACATGCTAAGGTTTGAA+TGG - Chr5:20923486-20923505 MsG0580025589.01.T01:intron 35.0%
TGAGACAATGCCATATAGAT+TGG - Chr5:20923967-20923986 MsG0580025589.01.T01:intron 35.0%
TGATAACTCTTGTGGATTTC+AGG - Chr5:20925777-20925796 MsG0580025589.01.T01:intron 35.0%
TGATTCATGAGTTCAACTGA+CGG + Chr5:20924315-20924334 None:intergenic 35.0%
TGCTTCTTCTGTTTACTACA+AGG - Chr5:20922017-20922036 MsG0580025589.01.T01:three_prime_UTR 35.0%
TTATCTCTAAACCATACCGT+GGG + Chr5:20922624-20922643 None:intergenic 35.0%
TTTCTGATTAATGGAAGAGG+AGG - Chr5:20926575-20926594 MsG0580025589.01.T01:intron 35.0%
! AAGCTTTTCAGTCTTGGAAA+AGG + Chr5:20926438-20926457 None:intergenic 35.0%
! AGAGACAGCAGATATCTTTT+TGG + Chr5:20923939-20923958 None:intergenic 35.0%
! AGAGACGTGAAATTTTCTGA+TGG + Chr5:20923035-20923054 None:intergenic 35.0%
! AGGATACATTGATTATGACC+AGG - Chr5:20924000-20924019 MsG0580025589.01.T01:intron 35.0%
! CAAGGTATTCTATGACTATG+AGG - Chr5:20924736-20924755 MsG0580025589.01.T01:intron 35.0%
! CTTGATCTTGATAACTCTTG+TGG - Chr5:20925769-20925788 MsG0580025589.01.T01:intron 35.0%
! GTTTTTCCTTTTGTGGATTC+AGG - Chr5:20925068-20925087 MsG0580025589.01.T01:intron 35.0%
! TATAGATTGGATGAAAGCAC+AGG - Chr5:20923980-20923999 MsG0580025589.01.T01:intron 35.0%
! TGTTGTGAAGAAGCATGATA+TGG - Chr5:20922907-20922926 MsG0580025589.01.T01:intron 35.0%
! TTTTGATGCATCCGTGAATT+TGG - Chr5:20925860-20925879 MsG0580025589.01.T01:intron 35.0%
!! AGCAGATATCTTTTTGGTGT+CGG + Chr5:20923933-20923952 None:intergenic 35.0%
!! ATCTATGTTCAGGGTATTGA+TGG - Chr5:20925593-20925612 MsG0580025589.01.T01:CDS 35.0%
!! CAGCTCTAAAGAAAACAGAT+AGG + Chr5:20922802-20922821 None:intergenic 35.0%
!! GACGTATTATGTTTGCTATG+TGG - Chr5:20926507-20926526 MsG0580025589.01.T01:intron 35.0%
!! GACTGAGAATCATCTAGTTT+TGG - Chr5:20925308-20925327 MsG0580025589.01.T01:intron 35.0%
!!! CTATCTGTTTTCTTTAGAGC+TGG - Chr5:20922800-20922819 MsG0580025589.01.T01:CDS 35.0%
AACTCCTGCTCTTACTTCAA+GGG - Chr5:20925800-20925819 MsG0580025589.01.T01:intron 40.0%
AAGATTAAGGCAGAGAGCAA+AGG - Chr5:20925888-20925907 MsG0580025589.01.T01:intron 40.0%
AATCTCTGATTGCACGTATG+AGG + Chr5:20926078-20926097 None:intergenic 40.0%
ACTGATAAGTAAGTGGACAG+AGG - Chr5:20922580-20922599 MsG0580025589.01.T01:CDS 40.0%
ACTTTCATTTGGGTCCTGTT+TGG - Chr5:20926762-20926781 MsG0580025589.01.T01:five_prime_UTR 40.0%
AGAGTGATGAGAAGTGAAGA+AGG + Chr5:20922048-20922067 None:intergenic 40.0%
AGCAGTGATGTTAGCAGATA+TGG - Chr5:20924370-20924389 MsG0580025589.01.T01:intron 40.0%
AGCTATGATCTTCTTCAGGA+AGG - Chr5:20924496-20924515 MsG0580025589.01.T01:CDS 40.0%
AGCTTGAGAAAGCTAGACAA+TGG - Chr5:20922457-20922476 MsG0580025589.01.T01:intron 40.0%
CAATTGCGCAAAATTTGCAC+AGG - Chr5:20925134-20925153 MsG0580025589.01.T01:intron 40.0%
CACTGCTGATATTAGCTGTA+TGG - Chr5:20925961-20925980 MsG0580025589.01.T01:intron 40.0%
GAAAAGTCAAAGTAGTTGCC+AGG + Chr5:20925355-20925374 None:intergenic 40.0%
GAAACCTCACGATAGAATCA+TGG - Chr5:20923657-20923676 MsG0580025589.01.T01:intron 40.0%
GCAATTGAATTCTCCACTTG+AGG - Chr5:20922404-20922423 MsG0580025589.01.T01:intron 40.0%
GCTATGATCTTCTTCAGGAA+GGG - Chr5:20924497-20924516 MsG0580025589.01.T01:CDS 40.0%
GGTCAACACAACATAACAGA+TGG - Chr5:20925181-20925200 MsG0580025589.01.T01:intron 40.0%
GTATAAAGCATACCAAGAGC+AGG - Chr5:20925104-20925123 MsG0580025589.01.T01:intron 40.0%
TCAATCTCTGTGGTCAAACA+AGG + Chr5:20925210-20925229 None:intergenic 40.0%
TCACGCTCAGAAAAACTCAT+GGG + Chr5:20923541-20923560 None:intergenic 40.0%
TCAGGATCAATTTCCTCAAG+TGG + Chr5:20922420-20922439 None:intergenic 40.0%
TCCGTATTGAGTTTCATGTC+TGG - Chr5:20924603-20924622 MsG0580025589.01.T01:intron 40.0%
TGAGAAAGCTAGACAATGGA+AGG - Chr5:20922461-20922480 MsG0580025589.01.T01:intron 40.0%
TGTTGAGGAGGATTTCGTTA+AGG - Chr5:20925827-20925846 MsG0580025589.01.T01:intron 40.0%
TTCACGCTCAGAAAAACTCA+TGG + Chr5:20923542-20923561 None:intergenic 40.0%
TTGTAGCCTGAATCCACAAA+AGG + Chr5:20925077-20925096 None:intergenic 40.0%
TTGTCATACACAGCTTCATC+AGG + Chr5:20922183-20922202 None:intergenic 40.0%
TTTGAAGGTGAACCAGACAA+AGG + Chr5:20923613-20923632 None:intergenic 40.0%
! AACAAAATCACGTGTCACTG+CGG + Chr5:20922307-20922326 None:intergenic 40.0%
! GAAAAGAGGTATGTCCTTGA+AGG - Chr5:20924543-20924562 MsG0580025589.01.T01:intron 40.0%
! TGAGTTTTTCTGAGCGTGAA+TGG - Chr5:20923542-20923561 MsG0580025589.01.T01:CDS 40.0%
!! AGGACGTGAAGATTTGTTGA+TGG + Chr5:20921989-20922008 None:intergenic 40.0%
!! ATCAATCAAGCTGTTTTCCC+CGG - Chr5:20924764-20924783 MsG0580025589.01.T01:intron 40.0%
!! TACTTCAAGGGGATTTGTTG+AGG - Chr5:20925812-20925831 MsG0580025589.01.T01:intron 40.0%
!! TCTCATCTTTGAGATGGCAA+TGG - Chr5:20921936-20921955 MsG0580025589.01.T01:three_prime_UTR 40.0%
!! TGATACTGACTTGAGAGAGT+GGG - Chr5:20925005-20925024 MsG0580025589.01.T01:CDS 40.0%
!! TTATGTTTGCTATGTGGCAG+TGG - Chr5:20926513-20926532 MsG0580025589.01.T01:intron 40.0%
!! TTGATACTGACTTGAGAGAG+TGG - Chr5:20925004-20925023 MsG0580025589.01.T01:CDS 40.0%
!!! GATTAGTTTTGGCCTGAAGA+GGG + Chr5:20924145-20924164 None:intergenic 40.0%
!!! TATTATTTTGGTGAAGGGGC+TGG - Chr5:20923001-20923020 MsG0580025589.01.T01:CDS 40.0%
AAGAAGATCATAGCTCCACG+TGG + Chr5:20924491-20924510 None:intergenic 45.0%
AATCCCCTTGAAGTAAGAGC+AGG + Chr5:20925807-20925826 None:intergenic 45.0%
AATTGCTGAGAACCTGCTCT+TGG + Chr5:20925119-20925138 None:intergenic 45.0%
ACAACTCACAAGTCACTTCG+TGG - Chr5:20924464-20924483 MsG0580025589.01.T01:CDS 45.0%
ACTCCTGCTCTTACTTCAAG+GGG - Chr5:20925801-20925820 MsG0580025589.01.T01:intron 45.0%
AGGCCAAAACTAATCGTTGC+CGG - Chr5:20924150-20924169 MsG0580025589.01.T01:CDS 45.0%
AGTGCCATGATTCTATCGTG+AGG + Chr5:20923664-20923683 None:intergenic 45.0%
ATCCAACCGAAATGCTTCCA+AGG + Chr5:20923321-20923340 None:intergenic 45.0%
CAAGCTTCGTCATGATGTTG+AGG - Chr5:20926100-20926119 MsG0580025589.01.T01:intron 45.0%
CCAGTAATGGTATGGTTGTG+AGG + Chr5:20924803-20924822 None:intergenic 45.0%
CCTCACAACCATACCATTAC+TGG - Chr5:20924800-20924819 MsG0580025589.01.T01:intron 45.0%
CCTCCATAATATCTTGCTCC+AGG + Chr5:20923113-20923132 None:intergenic 45.0%
CCTGGAGCAAGATATTATGG+AGG - Chr5:20923110-20923129 MsG0580025589.01.T01:intron 45.0%
CGGCTAAACCAGTAATGGTA+TGG + Chr5:20924811-20924830 None:intergenic 45.0%
CTCAACATCATGACGAAGCT+TGG + Chr5:20926102-20926121 None:intergenic 45.0%
CTGTCTGTTATGCAAGCTGT+TGG - Chr5:20923053-20923072 MsG0580025589.01.T01:CDS 45.0%
GAACTCCTGCTCTTACTTCA+AGG - Chr5:20925799-20925818 MsG0580025589.01.T01:intron 45.0%
GCATCTTTCTCATGGATACC+AGG - Chr5:20923702-20923721 MsG0580025589.01.T01:intron 45.0%
GTGGAGCTATGATCTTCTTC+AGG - Chr5:20924492-20924511 MsG0580025589.01.T01:CDS 45.0%
TATGGCACACATCAGTGGAT+TGG - Chr5:20924388-20924407 MsG0580025589.01.T01:intron 45.0%
TGATTATGCACGCATACGCA+AGG - Chr5:20924197-20924216 MsG0580025589.01.T01:CDS 45.0%
TGCAACGGCTAAACCAGTAA+TGG + Chr5:20924816-20924835 None:intergenic 45.0%
TGCACGTTCACTGCAAATCA+GGG + Chr5:20923589-20923608 None:intergenic 45.0%
TGTGTTCTTACCTCCCCATT+TGG + Chr5:20923348-20923367 None:intergenic 45.0%
TTCCAACACCTTCTCAACTC+TGG + Chr5:20925621-20925640 None:intergenic 45.0%
TTTAGCCGTTGCATTGAAGC+AGG - Chr5:20924823-20924842 MsG0580025589.01.T01:intron 45.0%
! AAAGGCTACGAGCTTGTTTC+TGG - Chr5:20925282-20925301 MsG0580025589.01.T01:intron 45.0%
! ACGAAGTGACTTGTGAGTTG+TGG + Chr5:20924465-20924484 None:intergenic 45.0%
!! ACAGAAGAAGCACTGAAGAG+AGG + Chr5:20922009-20922028 None:intergenic 45.0%
!! CTTTGAGATGGCAATGGCAA+TGG - Chr5:20921942-20921961 MsG0580025589.01.T01:three_prime_UTR 45.0%
!! GCAGATGAAAAGCATTAGGC+TGG - Chr5:20926608-20926627 MsG0580025589.01.T01:intron 45.0%
!! TTCAAGGGGATTTGTTGAGG+AGG - Chr5:20925815-20925834 MsG0580025589.01.T01:intron 45.0%
!! TTGCAGGCTCTGAGTGATAA+AGG - Chr5:20925264-20925283 MsG0580025589.01.T01:intron 45.0%
!!! CGATTAGTTTTGGCCTGAAG+AGG + Chr5:20924146-20924165 None:intergenic 45.0%
!! ATGAAATAATAAAAAAAAAT+TGG + Chr5:20921775-20921794 None:intergenic 5.0%
ACCATAGCAGACACATCTCC+TGG + Chr5:20925677-20925696 None:intergenic 50.0%
AGAAATCGGCTACCCTCTTC+AGG - Chr5:20924130-20924149 MsG0580025589.01.T01:CDS 50.0%
ATACCCATCCTGATACCACC+AGG + Chr5:20925701-20925720 None:intergenic 50.0%
ATGGCACTTGATCTCCCTCA+TGG - Chr5:20923676-20923695 MsG0580025589.01.T01:intron 50.0%
CAATGGCAATGGCTCTTCGT+AGG - Chr5:20921953-20921972 MsG0580025589.01.T01:three_prime_UTR 50.0%
CACTTGATCTCCCTCATGGA+GGG - Chr5:20923680-20923699 MsG0580025589.01.T01:intron 50.0%
CTATGGTTCCTGGTGGTATC+AGG - Chr5:20925690-20925709 MsG0580025589.01.T01:intron 50.0%
CTGCACGTTCACTGCAAATC+AGG + Chr5:20923590-20923609 None:intergenic 50.0%
GAATTGTGTCCAGGCCTTCA+AGG + Chr5:20924560-20924579 None:intergenic 50.0%
GAGAAAGATGCCCTCCATGA+GGG + Chr5:20923693-20923712 None:intergenic 50.0%
GATGTGTCTGCTATGGTTCC+TGG - Chr5:20925680-20925699 MsG0580025589.01.T01:intron 50.0%
GCACGTTCACTGCAAATCAG+GGG + Chr5:20923588-20923607 None:intergenic 50.0%
GCAGATATGGCACACATCAG+TGG - Chr5:20924383-20924402 MsG0580025589.01.T01:intron 50.0%
GGCAGTGGTGGTAAAGACTA+TGG - Chr5:20926528-20926547 MsG0580025589.01.T01:intron 50.0%
GTTCCTGGTGGTATCAGGAT+GGG - Chr5:20925695-20925714 MsG0580025589.01.T01:intron 50.0%
TCCAGGAGATGTGTCTGCTA+TGG - Chr5:20925673-20925692 MsG0580025589.01.T01:intron 50.0%
TCTCTAAACCATACCGTGGG+AGG + Chr5:20922621-20922640 None:intergenic 50.0%
TGAGAAAGATGCCCTCCATG+AGG + Chr5:20923694-20923713 None:intergenic 50.0%
TGATGGCTCCAGAGTTGAGA+AGG - Chr5:20925610-20925629 MsG0580025589.01.T01:CDS 50.0%
TTCTTACCTCCCCATTTGGC+CGG + Chr5:20923344-20923363 None:intergenic 50.0%
! CTCCAGAGTTGAGAAGGTGT+TGG - Chr5:20925616-20925635 MsG0580025589.01.T01:CDS 50.0%
!! AGCGTGCCTTGGAAGCATTT+CGG - Chr5:20923312-20923331 MsG0580025589.01.T01:intron 50.0%
!! ATCAGTGGATTGGTTGCAGC+TGG - Chr5:20924398-20924417 MsG0580025589.01.T01:intron 50.0%
!! CATGGAGGGCATCTTTCTCA+TGG - Chr5:20923694-20923713 MsG0580025589.01.T01:intron 50.0%
!! GCTACGAGCTTGTTTCTGGT+GGG - Chr5:20925286-20925305 MsG0580025589.01.T01:intron 50.0%
!! GGAAGCATTTCGGTTGGATC+CGG - Chr5:20923322-20923341 MsG0580025589.01.T01:intron 50.0%
!! TACTGACTTGAGAGAGTGGG+TGG - Chr5:20925008-20925027 MsG0580025589.01.T01:CDS 50.0%
!! TGCCTTGGAAGCATTTCGGT+TGG - Chr5:20923316-20923335 MsG0580025589.01.T01:intron 50.0%
!! TGTTTGCTATGTGGCAGTGG+TGG - Chr5:20926516-20926535 MsG0580025589.01.T01:intron 50.0%
!!! GCACCGGCAACGATTAGTTT+TGG + Chr5:20924156-20924175 None:intergenic 50.0%
AAGTCACTTCGTGGACCACG+TGG - Chr5:20924473-20924492 MsG0580025589.01.T01:CDS 55.0%
ACGTGCATAGGCACTAGCAC+CGG + Chr5:20924172-20924191 None:intergenic 55.0%
ATGCTTCCAAGGCACGCTTC+TGG + Chr5:20923310-20923329 None:intergenic 55.0%
CGAGTTTAGCATGCCTCCCA+CGG - Chr5:20922605-20922624 MsG0580025589.01.T01:CDS 55.0%
GAGGTATGTCCTTGAAGGCC+TGG - Chr5:20924548-20924567 MsG0580025589.01.T01:intron 55.0%
GCACTTGATCTCCCTCATGG+AGG - Chr5:20923679-20923698 MsG0580025589.01.T01:intron 55.0%
GGTTCCTGGTGGTATCAGGA+TGG - Chr5:20925694-20925713 MsG0580025589.01.T01:intron 55.0%
GTGAACGTGCAGCCTTTGTC+TGG - Chr5:20923598-20923617 MsG0580025589.01.T01:intron 55.0%
GTGTCTGCTATGGTTCCTGG+TGG - Chr5:20925683-20925702 MsG0580025589.01.T01:intron 55.0%
TCGGTTGGATCCGGCCAAAT+GGG - Chr5:20923331-20923350 MsG0580025589.01.T01:intron 55.0%
TTAGCATGCCTCCCACGGTA+TGG - Chr5:20922610-20922629 MsG0580025589.01.T01:CDS 55.0%
TTCGGTTGGATCCGGCCAAA+TGG - Chr5:20923330-20923349 MsG0580025589.01.T01:intron 55.0%
! ACTATGCCAGAAGCGTGCCT+TGG - Chr5:20923301-20923320 MsG0580025589.01.T01:intron 55.0%
!! GGCTACGAGCTTGTTTCTGG+TGG - Chr5:20925285-20925304 MsG0580025589.01.T01:intron 55.0%
CGGTTGGATCCGGCCAAATG+GGG - Chr5:20923332-20923351 MsG0580025589.01.T01:CDS 60.0%
GTGAGGACCACCTTGCAGTC+CGG + Chr5:20924786-20924805 None:intergenic 60.0%
TGAGGACCACCTTGCAGTCC+GGG + Chr5:20924785-20924804 None:intergenic 60.0%
TTGGATCCGGCCAAATGGGG+AGG - Chr5:20923335-20923354 MsG0580025589.01.T01:CDS 60.0%
! GTTTTCCCCGGACTGCAAGG+TGG - Chr5:20924776-20924795 MsG0580025589.01.T01:intron 60.0%
!! GCTGTTTTCCCCGGACTGCA+AGG - Chr5:20924773-20924792 MsG0580025589.01.T01:intron 60.0%
GAGGACCACCTTGCAGTCCG+GGG + Chr5:20924784-20924803 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 20921765 20926914 20921765 ID=MsG0580025589.01;Name=MsG0580025589.01
Chr5 mRNA 20921765 20926914 20921765 ID=MsG0580025589.01.T01;Parent=MsG0580025589.01;Name=MsG0580025589.01.T01;_AED=0.42;_eAED=0.42;_QI=184|1|1|1|0.93|0.87|16|404|518
Chr5 exon 20921765 20922146 20921765 ID=MsG0580025589.01.T01:exon:23492;Parent=MsG0580025589.01.T01
Chr5 exon 20922473 20922643 20922473 ID=MsG0580025589.01.T01:exon:23491;Parent=MsG0580025589.01.T01
Chr5 exon 20922770 20922880 20922770 ID=MsG0580025589.01.T01:exon:23490;Parent=MsG0580025589.01.T01
Chr5 exon 20922963 20923074 20922963 ID=MsG0580025589.01.T01:exon:23489;Parent=MsG0580025589.01.T01
Chr5 exon 20923332 20923409 20923332 ID=MsG0580025589.01.T01:exon:23488;Parent=MsG0580025589.01.T01
Chr5 exon 20923524 20923589 20923524 ID=MsG0580025589.01.T01:exon:23487;Parent=MsG0580025589.01.T01
Chr5 exon 20923835 20923939 20923835 ID=MsG0580025589.01.T01:exon:23486;Parent=MsG0580025589.01.T01
Chr5 exon 20924129 20924326 20924129 ID=MsG0580025589.01.T01:exon:23485;Parent=MsG0580025589.01.T01
Chr5 exon 20924461 20924553 20924461 ID=MsG0580025589.01.T01:exon:23484;Parent=MsG0580025589.01.T01
Chr5 exon 20924658 20924750 20924658 ID=MsG0580025589.01.T01:exon:23483;Parent=MsG0580025589.01.T01
Chr5 exon 20924956 20925080 20924956 ID=MsG0580025589.01.T01:exon:23482;Parent=MsG0580025589.01.T01
Chr5 exon 20925323 20925399 20925323 ID=MsG0580025589.01.T01:exon:23481;Parent=MsG0580025589.01.T01
Chr5 exon 20925541 20925662 20925541 ID=MsG0580025589.01.T01:exon:23480;Parent=MsG0580025589.01.T01
Chr5 exon 20926197 20926283 20926197 ID=MsG0580025589.01.T01:exon:23479;Parent=MsG0580025589.01.T01
Chr5 exon 20926458 20926508 20926458 ID=MsG0580025589.01.T01:exon:23478;Parent=MsG0580025589.01.T01
Chr5 exon 20926641 20926914 20926641 ID=MsG0580025589.01.T01:exon:23477;Parent=MsG0580025589.01.T01
Chr5 five_prime_UTR 20926731 20926914 20926731 ID=MsG0580025589.01.T01:five_prime_utr;Parent=MsG0580025589.01.T01
Chr5 CDS 20926641 20926730 20926641 ID=MsG0580025589.01.T01:cds;Parent=MsG0580025589.01.T01
Chr5 CDS 20926458 20926508 20926458 ID=MsG0580025589.01.T01:cds;Parent=MsG0580025589.01.T01
Chr5 CDS 20926197 20926283 20926197 ID=MsG0580025589.01.T01:cds;Parent=MsG0580025589.01.T01
Chr5 CDS 20925541 20925662 20925541 ID=MsG0580025589.01.T01:cds;Parent=MsG0580025589.01.T01
Chr5 CDS 20925323 20925399 20925323 ID=MsG0580025589.01.T01:cds;Parent=MsG0580025589.01.T01
Chr5 CDS 20924956 20925080 20924956 ID=MsG0580025589.01.T01:cds;Parent=MsG0580025589.01.T01
Chr5 CDS 20924658 20924750 20924658 ID=MsG0580025589.01.T01:cds;Parent=MsG0580025589.01.T01
Chr5 CDS 20924461 20924553 20924461 ID=MsG0580025589.01.T01:cds;Parent=MsG0580025589.01.T01
Chr5 CDS 20924129 20924326 20924129 ID=MsG0580025589.01.T01:cds;Parent=MsG0580025589.01.T01
Chr5 CDS 20923835 20923939 20923835 ID=MsG0580025589.01.T01:cds;Parent=MsG0580025589.01.T01
Chr5 CDS 20923524 20923589 20923524 ID=MsG0580025589.01.T01:cds;Parent=MsG0580025589.01.T01
Chr5 CDS 20923332 20923409 20923332 ID=MsG0580025589.01.T01:cds;Parent=MsG0580025589.01.T01
Chr5 CDS 20922963 20923074 20922963 ID=MsG0580025589.01.T01:cds;Parent=MsG0580025589.01.T01
Chr5 CDS 20922770 20922880 20922770 ID=MsG0580025589.01.T01:cds;Parent=MsG0580025589.01.T01
Chr5 CDS 20922495 20922643 20922495 ID=MsG0580025589.01.T01:cds;Parent=MsG0580025589.01.T01
Chr5 three_prime_UTR 20922473 20922494 20922473 ID=MsG0580025589.01.T01:three_prime_utr;Parent=MsG0580025589.01.T01
Chr5 three_prime_UTR 20921765 20922146 20921765 ID=MsG0580025589.01.T01:three_prime_utr;Parent=MsG0580025589.01.T01
Gene Sequence

>MsG0580025589.01.T01

ATGGCAATGGCAATGGCTCTTCGTAGGCTTTCTTCTTCCATCAACAAATCTTCACGTCCTCTCTTCAGTGCTTCTTCTGTTTACTACAAGTCATCTTTGCCTGATGAAGCTGTGTATGACAAAGAGAATTCACGTGTTTCGTGGCCAAAGCAATTGAATTCTCCACTTGAGGAAATTGATCCTGAAATTGCTGATATTATTGAGCTTGAGAAAGCTAGACAATGGAAGGGGCTGGAACTGATTCCATCAGAAAATTTCACGTCTCTGTCTGTTATGCAAGCTGTTGGATCTATCATGACAAACAAATACAGTGAAGGTTATCCTGGAGCAAGATATTATGGAGGAAATGAGTATATTGACATGGCTGAAACACTATGCCAGAAGCGTGCCTTGGAAGCATTTCGGTTGGATCCGGCCAAATGGGGAGTGAACGTGCAGCCTTTGTCTGGTTCACCTTCAAATTTTCATGTTTACACTGCATTGTTGAAACCTCACGATAGAATCATGGCACTTGATCTCCCTCATGGAGGGCATCTTTCTCATGGATACCAGACCGACACCAAAAAGATATCTGCTGTCTCTATATTTTTTGAGACAATGCCATATAGATTGGATGAAAGCACAGGATACATTGATTATGACCAGCTAGAGAAATCGGCTACCCTCTTCAGGCCAAAACTAATCGTTGCCGGTGCTAGTGCCTATGCACGTCTGTATGATTATGCACGCATACGCAAGGTGTGCGATAAACAGAAAGCAGTGATGTTAGCAGATATGGCACACATCAGTGGATTGGTTGCAGCTGGTGTTATCCCTTCACCTTTTGATTATGCAGATGTTGTGACAACCACAACTCACAAGTCACTTCGTGGACCACGTGGAGCTATGATCTTCTTCAGGAAGGGATTGAAAGAAGTCAACAAACAAGGAAAAGAGGTATTCTATGACTATGAGGACAAAATCAATCAAGCTGTTTTCCCCGGACTGCAAGGTGGTCCTCACAACCATACCATTACTGGTTTAGCCGTTGCATTGAAGCAGGCTACAACTCCAGAGTATAAAGCATACCAAGAGCAGGTTCTCAGCAATTGCGCAAAATTTGCACAGGCTCTGAGTGATAAAGGCTACGAGCTTGTTTCTGGTGGGACTGAGAATCATCTAGTTTTGGTGAATCTTAAGAACAAGGGTATTGATGGCTCCAGAGTTGAGAAGGTGTTGGAAGCAGTACATATTGCAGCTAATAAAAACACTGTTCCAGGAGATGTGTCTGCTATGGTTCCTGGTGGTATCAGGATGGGAACTCCTGCTCTTACTTCAAGGGGATTTGTTGAGGAGGATTTCGTTAAGGTAGCAGAGTATTTTGATGCATCCGTGAATTTGGCTTTGAAGATTAAGGCAGAGAGCAAAGGAACAAAATTGAAGGACTTCGTAGAAACATTGCAGTCATCCTCATACGTGCAATCAGAGATTTCCAAGCTTCGTCATGATGTTGAGGAGTTCGCAAAACAATTTCCAACCATTGGTTTTGAAAAATCAAGCATGAAGTACAACAAATAA

Protein sequence

>MsG0580025589.01.T01

MAMAMALRRLSSSINKSSRPLFSASSVYYKSSLPDEAVYDKENSRVSWPKQLNSPLEEIDPEIADIIELEKARQWKGLELIPSENFTSLSVMQAVGSIMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPAKWGVNVQPLSGSPSNFHVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFFRKGLKEVNKQGKEVFYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCAKFAQALSDKGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDASVNLALKIKAESKGTKLKDFVETLQSSSYVQSEISKLRHDVEEFAKQFPTIGFEKSSMKYNK*