AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680030858.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680030858.01.T01 MTR_6g013150 95.533 403 10 2 14 413 1 398 0.0 792
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680030858.01.T01 AT3G29185 71.429 343 95 2 74 413 54 396 0.0 521
MsG0680030858.01.T01 AT3G29185 72.727 286 75 2 131 413 49 334 2.91e-153 437

Find 91 sgRNAs with CRISPR-Local

Find 299 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGCTTTCTGTTAGCTCTTA+TGG 0.120996 6:-10578924 MsG0680030858.01.T01:CDS
TCATCAAACACTTCAGTTTC+TGG 0.125528 6:-10577141 MsG0680030858.01.T01:CDS
AGCAAGAGCCTTTCACATTT+TGG 0.171401 6:-10576233 MsG0680030858.01.T01:CDS
TTACACCATTTCTTGGTAAA+TGG 0.177570 6:-10575906 MsG0680030858.01.T01:CDS
TCTTCATAATCAGAACTATT+TGG 0.190748 6:+10574645 None:intergenic
ACAAACCGAAGTGGTGTCTA+TGG 0.282463 6:-10575868 MsG0680030858.01.T01:CDS
GACAATTTAGTCACATTTGA+TGG 0.303591 6:-10574882 MsG0680030858.01.T01:CDS
GTTGGTGTTGAAGTTGAAAT+TGG 0.306952 6:+10579396 None:intergenic
AATAGGATTACACCATTTCT+TGG 0.307951 6:-10575913 MsG0680030858.01.T01:CDS
TCAACCTTAATATCGGAAAA+TGG 0.312890 6:-10579234 MsG0680030858.01.T01:CDS
TGACAATGGCCAACTTATTC+AGG 0.316730 6:-10575800 MsG0680030858.01.T01:intron
CTCCTCTACTTGACAGTGCT+GGG 0.336473 6:-10576150 MsG0680030858.01.T01:CDS
CCTCAATGCAAATGCTTTCT+CGG 0.336795 6:+10576903 None:intergenic
AGCTTTCTGTTAGCTCTTAT+GGG 0.337911 6:-10578923 MsG0680030858.01.T01:CDS
ATCCATTGATTGAATATGAT+TGG 0.339447 6:-10574584 MsG0680030858.01.T01:three_prime_UTR
CCTCCTCTACTTGACAGTGC+TGG 0.367725 6:-10576151 MsG0680030858.01.T01:CDS
AGCATATCAACAGTGCCTTT+TGG 0.374978 6:+10576208 None:intergenic
ACAATCAAAATCTTTCCATT+TGG 0.388592 6:-10574787 MsG0680030858.01.T01:CDS
ACCAGTCTTTGCCTCTTGTC+AGG 0.390941 6:+10574744 None:intergenic
AAGTTGAAATTGGAGAGTTT+TGG 0.403728 6:+10579406 None:intergenic
CCTTTCCATTTACCAAGAAA+TGG 0.403825 6:+10575901 None:intergenic
AGCTTCATCAACCTTAATAT+CGG 0.425986 6:-10579241 MsG0680030858.01.T01:CDS
CTTGTCAACAGTAAACATAT+TGG 0.435663 6:+10577074 None:intergenic
AGAACTATTTGGACAGTTGA+GGG 0.458221 6:+10574656 None:intergenic
ATAGCGTTTGAATTTGATGA+TGG 0.460664 6:+10579352 None:intergenic
CTAACCAACAGAACTCCAAA+TGG 0.465800 6:+10574772 None:intergenic
AACCAATCATATTCAATCAA+TGG 0.470820 6:+10574582 None:intergenic
CATGCCAGGACACAGAGAAT+AGG 0.480971 6:-10575930 MsG0680030858.01.T01:intron
CCGAGAAAGCATTTGCATTG+AGG 0.482157 6:-10576903 MsG0680030858.01.T01:CDS
ATTACCTGGTGGCATGTACA+TGG 0.483394 6:-10574841 MsG0680030858.01.T01:CDS
CACGTATGATGTCGAAGGCT+TGG 0.486499 6:-10574718 MsG0680030858.01.T01:CDS
CTTTCCATTTGGAGTTCTGT+TGG 0.486980 6:-10574776 MsG0680030858.01.T01:CDS
AATGCAAATGCTTTCTCGGA+TGG 0.491967 6:+10576907 None:intergenic
TGGAAACTGTATTACGGCAG+GGG 0.496002 6:-10576861 MsG0680030858.01.T01:CDS
TTATTACAACTGATTGAGAC+AGG 0.499361 6:+10574472 None:intergenic
ATGCAAATGCTTTCTCGGAT+GGG 0.503693 6:+10576908 None:intergenic
GTATGTTGGAAACTGTATTA+CGG 0.507856 6:-10576867 MsG0680030858.01.T01:CDS
CAGAACTATTTGGACAGTTG+AGG 0.508827 6:+10574655 None:intergenic
TATCTCTTTGTAAAGAGTAC+AGG 0.511529 6:+10576260 None:intergenic
TGTAAAATACCTGAATAAGT+TGG 0.513142 6:+10575791 None:intergenic
GAATGAGAAGAATTTGTTGT+TGG 0.513403 6:+10579378 None:intergenic
GCATTGAGGTATCAAACAGC+TGG 0.518125 6:-10576889 MsG0680030858.01.T01:CDS
GTTGGAAACTGTATTACGGC+AGG 0.523062 6:-10576863 MsG0680030858.01.T01:CDS
AGATGACGATGATGCGGAAT+GGG 0.527733 6:-10577118 MsG0680030858.01.T01:CDS
ACCTGACAAGAGGCAAAGAC+TGG 0.527879 6:-10574745 MsG0680030858.01.T01:CDS
GAAACTGAAGTGTTTGATGA+AGG 0.538761 6:+10577144 None:intergenic
GTATCAAACAGCTGGTATGT+TGG 0.539394 6:-10576881 MsG0680030858.01.T01:CDS
TGTAGCAATTTGATGCTGGC+GGG 0.541538 6:-10578971 MsG0680030858.01.T01:intron
AACAAGAGAAGGTCGGCGAG+AGG 0.550515 6:+10576294 None:intergenic
TTCCTAGAGGAACGAAGTGA+GGG 0.551395 6:-10576178 MsG0680030858.01.T01:CDS
ACAAGAGAAGGTCGGCGAGA+GGG 0.557468 6:+10576295 None:intergenic
CCATTTCTTGGTAAATGGAA+AGG 0.561343 6:-10575901 MsG0680030858.01.T01:CDS
CAAACCGAAGTGGTGTCTAT+GGG 0.561656 6:-10575867 MsG0680030858.01.T01:CDS
TATCAAATGATTCTATTACC+TGG 0.567542 6:-10574855 MsG0680030858.01.T01:CDS
TTGGAAACTGTATTACGGCA+GGG 0.573495 6:-10576862 MsG0680030858.01.T01:CDS
CTTCCTAGAGGAACGAAGTG+AGG 0.575142 6:-10576179 MsG0680030858.01.T01:CDS
ACAACCAATGTGCATTGGAC+TGG 0.576812 6:-10574915 MsG0680030858.01.T01:CDS
CATCCCATGTACATGCCACC+AGG 0.581224 6:+10574837 None:intergenic
GTTGAGTTGTGTTGCGACAA+TGG 0.583330 6:-10579470 MsG0680030858.01.T01:CDS
GACACCACTTCGGTTTGTAA+CGG 0.583815 6:+10575873 None:intergenic
ATGTTACAACCAATGTGCAT+TGG 0.585939 6:-10574920 MsG0680030858.01.T01:CDS
GCTTTCTGTTAGCTCTTATG+GGG 0.591488 6:-10578922 MsG0680030858.01.T01:CDS
TAGCGTTTGAATTTGATGAT+GGG 0.593630 6:+10579353 None:intergenic
GAGATGACGATGATGCGGAA+TGG 0.595696 6:-10577119 MsG0680030858.01.T01:CDS
CTTAATATCGGAAAATGGAA+CGG 0.600042 6:-10579229 MsG0680030858.01.T01:CDS
CAATTCTCACAAACAAGAGA+AGG 0.603260 6:+10576283 None:intergenic
AATGGATGAAAATTATGCAA+AGG 0.605211 6:+10574600 None:intergenic
ACCCCTCACTTCGTTCCTCT+AGG 0.605321 6:+10576176 None:intergenic
AATAAAATAAGTAGATGAGA+CGG 0.608181 6:+10574695 None:intergenic
TTGTAGCAATTTGATGCTGG+CGG 0.608328 6:-10578972 MsG0680030858.01.T01:intron
CCAGCACTGTCAAGTAGAGG+AGG 0.612692 6:+10576151 None:intergenic
TTCTGGAGATGACGATGATG+CGG 0.615230 6:-10577124 MsG0680030858.01.T01:CDS
GTTCTTGGAGAAGATGACAT+TGG 0.622939 6:-10576838 MsG0680030858.01.T01:CDS
AATTTAGTCACATTTGATGG+AGG 0.624019 6:-10574879 MsG0680030858.01.T01:CDS
TCCTCTACTTGACAGTGCTG+GGG 0.624603 6:-10576149 MsG0680030858.01.T01:intron
GGAAACTGTATTACGGCAGG+GGG 0.628370 6:-10576860 MsG0680030858.01.T01:CDS
AAAGGTAAATGAGTATTACA+TGG 0.634242 6:+10574618 None:intergenic
GGTTAGAGACACCTGACAAG+AGG 0.634907 6:-10574755 MsG0680030858.01.T01:CDS
TGTTACTTGTACATCTGATG+AGG 0.635331 6:-10574946 MsG0680030858.01.T01:CDS
ACCCCAGCACTGTCAAGTAG+AGG 0.643774 6:+10576148 None:intergenic
TATGCTTATCATCTTCCTAG+AGG 0.644237 6:-10576191 MsG0680030858.01.T01:CDS
CAAATGATTCTATTACCTGG+TGG 0.650355 6:-10574852 MsG0680030858.01.T01:CDS
TCTCACAAACAAGAGAAGGT+CGG 0.653517 6:+10576287 None:intergenic
GTTCGCACGTATGATGTCGA+AGG 0.663448 6:-10574723 MsG0680030858.01.T01:CDS
TTACCTGGTGGCATGTACAT+GGG 0.668069 6:-10574840 MsG0680030858.01.T01:CDS
TCCTAGAGGAACGAAGTGAG+GGG 0.678973 6:-10576177 MsG0680030858.01.T01:CDS
TAGACCCATAGACACCACTT+CGG 0.688155 6:+10575863 None:intergenic
TGTGCCAGTCCAATGCACAT+TGG 0.691438 6:+10574911 None:intergenic
CGTTCCGTTACAAACCGAAG+TGG 0.693369 6:-10575877 MsG0680030858.01.T01:CDS
ACATTGGTGAAGAATCACCT+AGG 0.705045 6:-10576822 MsG0680030858.01.T01:intron
TTACATGAGATGAATGACAA+TGG 0.736609 6:-10575814 MsG0680030858.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGAAAACAAATATTGAAA+TGG + Chr6:10574727-10574746 None:intergenic 15.0%
!! AAATCAACAAAAAAAGAATA+TGG + Chr6:10576907-10576926 None:intergenic 15.0%
!! AAATTAAAACAGTTAAACAA+AGG + Chr6:10578251-10578270 None:intergenic 15.0%
!! AAATTGCTTAAAAAGTTAAA+TGG - Chr6:10576617-10576636 MsG0680030858.01.T01:intron 15.0%
!! ATTTAGTTATTTATTTGTGA+AGG - Chr6:10577881-10577900 MsG0680030858.01.T01:intron 15.0%
!! CACAAATAAATAACTAAATA+TGG + Chr6:10577880-10577899 None:intergenic 15.0%
!! GTTAATACAGTTTAAATATA+TGG + Chr6:10578674-10578693 None:intergenic 15.0%
!! TTCAAATGTATATGATTTAT+AGG + Chr6:10578498-10578517 None:intergenic 15.0%
!!! ACAATTGATTTATAAAGAAA+AGG + Chr6:10576039-10576058 None:intergenic 15.0%
!!! ATTTAACTTTTTAAGCAATT+TGG + Chr6:10576618-10576637 None:intergenic 15.0%
!!! TAAAATTTTAGTCAAATGTA+AGG - Chr6:10575459-10575478 MsG0680030858.01.T01:intron 15.0%
!!! TTGACAAAACTTTTTTTTTT+TGG + Chr6:10579480-10579499 None:intergenic 15.0%
!!! TTGTTTAACTGTTTTAATTT+TGG - Chr6:10578251-10578270 MsG0680030858.01.T01:intron 15.0%
!! AAAATGTGGTTAATTACATT+CGG - Chr6:10578586-10578605 MsG0680030858.01.T01:intron 20.0%
!! AAATCAATTGTTGAAAAAGA+AGG - Chr6:10576048-10576067 MsG0680030858.01.T01:intron 20.0%
!! AAATTGTGAAAATAAGTCTA+AGG + Chr6:10577567-10577586 None:intergenic 20.0%
!! AAGTTTATAACAGAAAATTG+TGG + Chr6:10578470-10578489 None:intergenic 20.0%
!! AATAAAATAAGTAGATGAGA+CGG + Chr6:10579215-10579234 None:intergenic 20.0%
!! AATCAGTTGTAATAAAAAGA+TGG - Chr6:10579443-10579462 MsG0680030858.01.T01:CDS 20.0%
!! AATTACAATTAAAGATTGTG+AGG + Chr6:10575906-10575925 None:intergenic 20.0%
!! TATGCATATTAAATGTTTGT+AGG + Chr6:10577190-10577209 None:intergenic 20.0%
!!! AATGTAATTAACCACATTTT+TGG + Chr6:10578586-10578605 None:intergenic 20.0%
!!! CTTATTTTCACAATTTCTTA+TGG - Chr6:10577571-10577590 MsG0680030858.01.T01:intron 20.0%
!!! GTTAGTTTAACTAAAACTTA+GGG - Chr6:10575671-10575690 MsG0680030858.01.T01:intron 20.0%
!!! TAATGATCTGAAACTAAAAT+AGG + Chr6:10575970-10575989 None:intergenic 20.0%
!!! TATTTGTTGAACATACTATA+CGG + Chr6:10578337-10578356 None:intergenic 20.0%
!!! TATTTTAGTTTCAGATCATT+AGG - Chr6:10575969-10575988 MsG0680030858.01.T01:intron 20.0%
!!! TGTTAGTTTAACTAAAACTT+AGG - Chr6:10575670-10575689 MsG0680030858.01.T01:intron 20.0%
!!! TTAAACCACATGTTTTAAAA+TGG + Chr6:10576311-10576330 None:intergenic 20.0%
!!! TTCAAATCATTTTCAAACAA+TGG + Chr6:10575565-10575584 None:intergenic 20.0%
!!! TTCTTTTTTTGTTGATTTCT+TGG - Chr6:10576909-10576928 MsG0680030858.01.T01:CDS 20.0%
! AAACATTTAATATGCATAGC+GGG - Chr6:10577192-10577211 MsG0680030858.01.T01:intron 25.0%
! AAAGGTAAATGAGTATTACA+TGG + Chr6:10579292-10579311 None:intergenic 25.0%
! AACATCTTGTGTAAAAAACA+AGG - Chr6:10575158-10575177 MsG0680030858.01.T01:intron 25.0%
! AACCAATCATATTCAATCAA+TGG + Chr6:10579328-10579347 None:intergenic 25.0%
! AATGGATGAAAATTATGCAA+AGG + Chr6:10579310-10579329 None:intergenic 25.0%
! ACAATCAAAATCTTTCCATT+TGG - Chr6:10579120-10579139 MsG0680030858.01.T01:intron 25.0%
! ACACAATATATGAAGCTAAA+GGG + Chr6:10578879-10578898 None:intergenic 25.0%
! ACCATTAATAATAGCTATCT+TGG + Chr6:10576182-10576201 None:intergenic 25.0%
! ACTGCATTAAAAACATAACA+AGG + Chr6:10578281-10578300 None:intergenic 25.0%
! ATATGGCTAATTATGTTCAA+TGG + Chr6:10578657-10578676 None:intergenic 25.0%
! ATCATCTTGTGTAAAAAACA+TGG - Chr6:10575354-10575373 MsG0680030858.01.T01:intron 25.0%
! CAAACATTTAATATGCATAG+CGG - Chr6:10577191-10577210 MsG0680030858.01.T01:intron 25.0%
! CATATACATTTGAACACATT+TGG - Chr6:10578504-10578523 MsG0680030858.01.T01:intron 25.0%
! TAATAACAAAATAGCAAACC+AGG - Chr6:10576126-10576145 MsG0680030858.01.T01:intron 25.0%
! TAATAGCTATCTTGGATATA+AGG + Chr6:10576174-10576193 None:intergenic 25.0%
! TACACAATATATGAAGCTAA+AGG + Chr6:10578880-10578899 None:intergenic 25.0%
! TAGTATGTTCAACAAATACA+TGG - Chr6:10578339-10578358 MsG0680030858.01.T01:intron 25.0%
! TATCAAATGATTCTATTACC+TGG - Chr6:10579052-10579071 MsG0680030858.01.T01:intron 25.0%
! TATCTGCAAACTAATTGTAA+TGG + Chr6:10576971-10576990 None:intergenic 25.0%
! TCCAAGATAGCTATTATTAA+TGG - Chr6:10576178-10576197 MsG0680030858.01.T01:CDS 25.0%
! TCTTCATAATCAGAACTATT+TGG + Chr6:10579265-10579284 None:intergenic 25.0%
! TGGCATGAATTAAAAATGAA+TGG + Chr6:10577964-10577983 None:intergenic 25.0%
! TGTAAAATACCTGAATAAGT+TGG + Chr6:10578119-10578138 None:intergenic 25.0%
! TTGCTTAAACAAACAAACAA+GGG - Chr6:10575085-10575104 MsG0680030858.01.T01:intron 25.0%
! TTTGCTTAAACAAACAAACA+AGG - Chr6:10575084-10575103 MsG0680030858.01.T01:intron 25.0%
!! AAAAGTTCTAATCTCATGAT+TGG + Chr6:10576259-10576278 None:intergenic 25.0%
!! ACTTTTAGATGAAGATTAGA+CGG - Chr6:10576273-10576292 MsG0680030858.01.T01:CDS 25.0%
!! AGCATTATGTATCTTCATTT+TGG - Chr6:10578728-10578747 MsG0680030858.01.T01:intron 25.0%
!! ATCCATTGATTGAATATGAT+TGG - Chr6:10579323-10579342 MsG0680030858.01.T01:CDS 25.0%
!! CTTTTGATGTGATATAGTTT+AGG - Chr6:10579362-10579381 MsG0680030858.01.T01:CDS 25.0%
!! TGTTTGGTTGATTTCTATTT+AGG - Chr6:10577144-10577163 MsG0680030858.01.T01:CDS 25.0%
!! TTACACAAGATGATGTTTTT+AGG + Chr6:10575348-10575367 None:intergenic 25.0%
!!! ATTACAATTAGTTTGCAGAT+AGG - Chr6:10576970-10576989 MsG0680030858.01.T01:intron 25.0%
!!! ATTCATTTTTAATTCATGCC+AGG - Chr6:10577963-10577982 MsG0680030858.01.T01:intron 25.0%
!!! GCTTTTTTATCAGAACATTT+TGG - Chr6:10577280-10577299 MsG0680030858.01.T01:intron 25.0%
!!! TAATTAACCACATTTTTGGA+TGG + Chr6:10578582-10578601 None:intergenic 25.0%
!!! TTCTTTTGTTTATTGCTTTG+TGG - Chr6:10574753-10574772 MsG0680030858.01.T01:CDS 25.0%
AATAGGATTACACCATTTCT+TGG - Chr6:10577994-10578013 MsG0680030858.01.T01:intron 30.0%
AATTAACACAATCAAGAGCT+TGG + Chr6:10576365-10576384 None:intergenic 30.0%
AATTTAGTCACATTTGATGG+AGG - Chr6:10579028-10579047 MsG0680030858.01.T01:intron 30.0%
AGATTGTGAGGCAAATTTAA+TGG + Chr6:10575894-10575913 None:intergenic 30.0%
AGCTTCATCAACCTTAATAT+CGG - Chr6:10574666-10574685 MsG0680030858.01.T01:exon 30.0%
ATACATTTGAACACATTTGG+AGG - Chr6:10578507-10578526 MsG0680030858.01.T01:intron 30.0%
ATAGCGTTTGAATTTGATGA+TGG + Chr6:10574558-10574577 None:intergenic 30.0%
ATTAACCATCAAAATTGCTG+TGG - Chr6:10578688-10578707 MsG0680030858.01.T01:intron 30.0%
CTTAATATCGGAAAATGGAA+CGG - Chr6:10574678-10574697 MsG0680030858.01.T01:exon 30.0%
CTTGTCAACAGTAAACATAT+TGG + Chr6:10576836-10576855 None:intergenic 30.0%
CTTGTGTAAAAAACATGGTA+AGG - Chr6:10575359-10575378 MsG0680030858.01.T01:intron 30.0%
GACAATTTAGTCACATTTGA+TGG - Chr6:10579025-10579044 MsG0680030858.01.T01:intron 30.0%
GGTCAATTTCTTGCATAAAA+AGG + Chr6:10577326-10577345 None:intergenic 30.0%
GGTTAATGACGTTCAAAATT+GGG + Chr6:10578449-10578468 None:intergenic 30.0%
GTATGCTTTGTAAGTGTTTA+AGG - Chr6:10576641-10576660 MsG0680030858.01.T01:intron 30.0%
GTATGTTGGAAACTGTATTA+CGG - Chr6:10577040-10577059 MsG0680030858.01.T01:intron 30.0%
GTTAATGACGTTCAAAATTG+GGG + Chr6:10578448-10578467 None:intergenic 30.0%
TAAACAAACAAACAAGAGCA+AGG - Chr6:10575286-10575305 MsG0680030858.01.T01:intron 30.0%
TAAACAAACAAACAAGGGTA+AGG - Chr6:10575090-10575109 MsG0680030858.01.T01:intron 30.0%
TAAGATAAGATGCCACAAAT+TGG + Chr6:10576667-10576686 None:intergenic 30.0%
TAATGGTGTGATCTATTGTA+AGG - Chr6:10576195-10576214 MsG0680030858.01.T01:CDS 30.0%
TACAATACACCAAAAATGGT+GGG - Chr6:10575191-10575210 MsG0680030858.01.T01:intron 30.0%
TACATTTGAACACATTTGGA+GGG - Chr6:10578508-10578527 MsG0680030858.01.T01:intron 30.0%
TAGAGTACACTAAAAATGGT+GGG - Chr6:10575387-10575406 MsG0680030858.01.T01:intron 30.0%
TCAACCTTAATATCGGAAAA+TGG - Chr6:10574673-10574692 MsG0680030858.01.T01:exon 30.0%
TCACTTTGATAAATCGTCTA+CGG - Chr6:10575535-10575554 MsG0680030858.01.T01:intron 30.0%
TGAACTACCCTGTAAATAAA+AGG - Chr6:10577515-10577534 MsG0680030858.01.T01:intron 30.0%
TGGTTAATGACGTTCAAAAT+TGG + Chr6:10578450-10578469 None:intergenic 30.0%
TGTGAAAATAAGTCTAAGGA+AGG + Chr6:10577563-10577582 None:intergenic 30.0%
TTACACCATTTCTTGGTAAA+TGG - Chr6:10578001-10578020 MsG0680030858.01.T01:intron 30.0%
TTACATGAGATGAATGACAA+TGG - Chr6:10578093-10578112 MsG0680030858.01.T01:intron 30.0%
TTATTACAACTGATTGAGAC+AGG + Chr6:10579438-10579457 None:intergenic 30.0%
TTCAAACTCCTGAAAAATTG+TGG - Chr6:10578550-10578569 MsG0680030858.01.T01:intron 30.0%
TTGTTTGTTTGTTTAAGCGA+GGG + Chr6:10575281-10575300 None:intergenic 30.0%
! AAACCTCTTCATTTTAGACT+CGG - Chr6:10577462-10577481 MsG0680030858.01.T01:intron 30.0%
! AAGTTGAAATTGGAGAGTTT+TGG + Chr6:10574504-10574523 None:intergenic 30.0%
! AATTTCCACAGCAATTTTGA+TGG + Chr6:10578696-10578715 None:intergenic 30.0%
! ACAACAAAACTTTGAGAAAG+TGG + Chr6:10578917-10578936 None:intergenic 30.0%
! ATTTTAAGCAAACACAGATG+AGG + Chr6:10575445-10575464 None:intergenic 30.0%
! CACTAATCTAGCAGATTTTA+AGG - Chr6:10575508-10575527 MsG0680030858.01.T01:intron 30.0%
! GTCATCTAAAATGAAGATCT+TGG + Chr6:10577368-10577387 None:intergenic 30.0%
! TAGCGTTTGAATTTGATGAT+GGG + Chr6:10574557-10574576 None:intergenic 30.0%
! TATCTCTTTGTAAAGAGTAC+AGG + Chr6:10577650-10577669 None:intergenic 30.0%
! TGGATATTTGAAAGAAGCAT+TGG + Chr6:10576951-10576970 None:intergenic 30.0%
! TTTTAAGCAAACACAGATGA+GGG + Chr6:10575444-10575463 None:intergenic 30.0%
! TTTTTGTAGCAATTTGATGC+TGG - Chr6:10574932-10574951 MsG0680030858.01.T01:CDS 30.0%
!! GAATGAGAAGAATTTGTTGT+TGG + Chr6:10574532-10574551 None:intergenic 30.0%
!! GCATCTTATCTTACTTTTCA+TGG - Chr6:10576674-10576693 MsG0680030858.01.T01:intron 30.0%
!!! ATGTATCTTCATTTTGGAGT+TGG - Chr6:10578734-10578753 MsG0680030858.01.T01:intron 30.0%
!!! TTCTGCCATTTTAAAACATG+TGG - Chr6:10576303-10576322 MsG0680030858.01.T01:CDS 30.0%
AAACACATGCTAAGAGAAAG+TGG - Chr6:10575994-10576013 MsG0680030858.01.T01:intron 35.0%
AGAACTATTTGGACAGTTGA+GGG + Chr6:10579254-10579273 None:intergenic 35.0%
AGACAGTGACTTGATTGATA+TGG + Chr6:10575751-10575770 None:intergenic 35.0%
AGAGTTCAATTAGCACTGTT+TGG - Chr6:10577128-10577147 MsG0680030858.01.T01:CDS 35.0%
AGTTGTTCTAATGAGTGAGA+TGG - Chr6:10575635-10575654 MsG0680030858.01.T01:intron 35.0%
ATATACCAACTGAACACGAA+AGG + Chr6:10578793-10578812 None:intergenic 35.0%
ATATATGAAGCTAAAGGGAG+AGG + Chr6:10578874-10578893 None:intergenic 35.0%
ATGTGGTTAATTACATTCGG+TGG - Chr6:10578589-10578608 MsG0680030858.01.T01:intron 35.0%
ATGTTACAACCAATGTGCAT+TGG - Chr6:10578987-10579006 MsG0680030858.01.T01:intron 35.0%
CAAATGATTCTATTACCTGG+TGG - Chr6:10579055-10579074 MsG0680030858.01.T01:intron 35.0%
CAATTCTCACAAACAAGAGA+AGG + Chr6:10577627-10577646 None:intergenic 35.0%
CAGAATAAAGTCTCACTTGT+TGG + Chr6:10576861-10576880 None:intergenic 35.0%
CCATTTCTTGGTAAATGGAA+AGG - Chr6:10578006-10578025 MsG0680030858.01.T01:intron 35.0%
CCTTTCCATTTACCAAGAAA+TGG + Chr6:10578009-10578028 None:intergenic 35.0%
CTATCTTGGATATAAGGAAC+TGG + Chr6:10576168-10576187 None:intergenic 35.0%
CTTGTTTGTTTGTTTAAGCG+AGG + Chr6:10575282-10575301 None:intergenic 35.0%
GACAGTGACTTGATTGATAT+GGG + Chr6:10575750-10575769 None:intergenic 35.0%
GGTTAATTGTGTTCAGTTGA+TGG + Chr6:10578427-10578446 None:intergenic 35.0%
GTACAATACACCAAAAATGG+TGG - Chr6:10575190-10575209 MsG0680030858.01.T01:intron 35.0%
GTAGAGTACACTAAAAATGG+TGG - Chr6:10575386-10575405 MsG0680030858.01.T01:intron 35.0%
GTTAATGCCATCCAAAAATG+TGG - Chr6:10578572-10578591 MsG0680030858.01.T01:intron 35.0%
TATACCAACTGAACACGAAA+GGG + Chr6:10578792-10578811 None:intergenic 35.0%
TATATGAAGCTAAAGGGAGA+GGG + Chr6:10578873-10578892 None:intergenic 35.0%
TATGACATGTAAGACTCGTT+TGG - Chr6:10577420-10577439 MsG0680030858.01.T01:intron 35.0%
TATGCTTATCATCTTCCTAG+AGG - Chr6:10577716-10577735 MsG0680030858.01.T01:intron 35.0%
TCATAGTATCAGTGTCATGT+TGG + Chr6:10574816-10574835 None:intergenic 35.0%
TCATCAAACACTTCAGTTTC+TGG - Chr6:10576766-10576785 MsG0680030858.01.T01:intron 35.0%
TCTATTGTAAGGATTCAGAC+TGG - Chr6:10576206-10576225 MsG0680030858.01.T01:CDS 35.0%
TGCGTACAATACACCAAAAA+TGG - Chr6:10575187-10575206 MsG0680030858.01.T01:intron 35.0%
TGCGTAGAGTACACTAAAAA+TGG - Chr6:10575383-10575402 MsG0680030858.01.T01:intron 35.0%
TTGTGATGTTGCAAAAAGTG+TGG - Chr6:10579096-10579115 MsG0680030858.01.T01:intron 35.0%
TTGTGTTAATCTCCATCCAA+AGG - Chr6:10576437-10576456 MsG0680030858.01.T01:intron 35.0%
TTTGATAAATCGTCTACGGT+GGG - Chr6:10575539-10575558 MsG0680030858.01.T01:intron 35.0%
! AACCTCTTCATTTTAGACTC+GGG - Chr6:10577463-10577482 MsG0680030858.01.T01:intron 35.0%
! AAGCTTTCTGTTAGCTCTTA+TGG - Chr6:10574983-10575002 MsG0680030858.01.T01:intron 35.0%
! AAGTGTTTAAGGCCAATTTG+TGG - Chr6:10576652-10576671 MsG0680030858.01.T01:intron 35.0%
! AGCTTTCTGTTAGCTCTTAT+GGG - Chr6:10574984-10575003 MsG0680030858.01.T01:intron 35.0%
! CGTTCCATTTTCCGATATTA+AGG + Chr6:10574680-10574699 None:intergenic 35.0%
! GAAACTGAAGTGTTTGATGA+AGG + Chr6:10576766-10576785 None:intergenic 35.0%
! GGCATTAACCACAATTTTTC+AGG + Chr6:10578561-10578580 None:intergenic 35.0%
! TGTTACTTGTACATCTGATG+AGG - Chr6:10578961-10578980 MsG0680030858.01.T01:CDS 35.0%
!! ACACTTTTTGCAACATCACA+AGG + Chr6:10579097-10579116 None:intergenic 35.0%
!! GTTGGTGTTGAAGTTGAAAT+TGG + Chr6:10574514-10574533 None:intergenic 35.0%
!! TTACACAAGATGTTGTTTCG+AGG + Chr6:10575152-10575171 None:intergenic 35.0%
!! TTTGTTGTTGATGCTGCTAT+TGG - Chr6:10578929-10578948 MsG0680030858.01.T01:CDS 35.0%
!!! TTTCACATTTTGGAGCCAAA+AGG - Chr6:10577684-10577703 MsG0680030858.01.T01:intron 35.0%
!!! TTTTGGCTCCAAAATGTGAA+AGG + Chr6:10577685-10577704 None:intergenic 35.0%
AATAACTCTTACTGCTGCGT+AGG - Chr6:10578143-10578162 MsG0680030858.01.T01:intron 40.0%
AATCAAGAGCTTGGAACCTT+TGG + Chr6:10576356-10576375 None:intergenic 40.0%
AATGCAAATGCTTTCTCGGA+TGG + Chr6:10577003-10577022 None:intergenic 40.0%
ACATTGGTGAAGAATCACCT+AGG - Chr6:10577085-10577104 MsG0680030858.01.T01:CDS 40.0%
ACGCAGCAGTAAGAGTTATT+AGG + Chr6:10578143-10578162 None:intergenic 40.0%
ACTGTGAGTTTCTACTTCCA+AGG + Chr6:10575612-10575631 None:intergenic 40.0%
AGGGTAATGAGTGTAAGTTG+AGG - Chr6:10575690-10575709 MsG0680030858.01.T01:intron 40.0%
ATGCAAATGCTTTCTCGGAT+GGG + Chr6:10577002-10577021 None:intergenic 40.0%
CAGAACTATTTGGACAGTTG+AGG + Chr6:10579255-10579274 None:intergenic 40.0%
CCTCAATGCAAATGCTTTCT+CGG + Chr6:10577007-10577026 None:intergenic 40.0%
CTAACCAACAGAACTCCAAA+TGG + Chr6:10579138-10579157 None:intergenic 40.0%
CTGTGAGTTTCTACTTCCAA+GGG + Chr6:10575611-10575630 None:intergenic 40.0%
CTTTGATAAATCGTCTACGG+TGG - Chr6:10575538-10575557 MsG0680030858.01.T01:intron 40.0%
GTATCAAACAGCTGGTATGT+TGG - Chr6:10577026-10577045 MsG0680030858.01.T01:intron 40.0%
GTGAGACTTTATTCTGTTGC+TGG - Chr6:10576865-10576884 MsG0680030858.01.T01:CDS 40.0%
GTTCTTGGAGAAGATGACAT+TGG - Chr6:10577069-10577088 MsG0680030858.01.T01:CDS 40.0%
GTTGTCTAATCTCCATCCAA+AGG - Chr6:10576337-10576356 MsG0680030858.01.T01:intron 40.0%
TAATCCTATTCTCTGTGTCC+TGG + Chr6:10577984-10578003 None:intergenic 40.0%
TAGTACTAGACCAACTATCG+AGG + Chr6:10578308-10578327 None:intergenic 40.0%
TATCAGTGTCATGTTGGTGT+CGG + Chr6:10574810-10574829 None:intergenic 40.0%
TCTCACAAACAAGAGAAGGT+CGG + Chr6:10577623-10577642 None:intergenic 40.0%
TGACAATGGCCAACTTATTC+AGG - Chr6:10578107-10578126 MsG0680030858.01.T01:intron 40.0%
TGAGTGCTTCGTTATTGAGA+GGG - Chr6:10574885-10574904 MsG0680030858.01.T01:CDS 40.0%
TGATAACCAATGTTGTCCCT+TGG - Chr6:10575592-10575611 MsG0680030858.01.T01:intron 40.0%
TGATGCTGCTATTGGAAATC+AGG - Chr6:10578937-10578956 MsG0680030858.01.T01:CDS 40.0%
TGTTTAATGTACAGCCTGCA+GGG + Chr6:10576742-10576761 None:intergenic 40.0%
TTGGAAACTGTATTACGGCA+GGG - Chr6:10577045-10577064 MsG0680030858.01.T01:intron 40.0%
TTGTAGCAATTTGATGCTGG+CGG - Chr6:10574935-10574954 MsG0680030858.01.T01:CDS 40.0%
TTGTTTAATGTACAGCCTGC+AGG + Chr6:10576743-10576762 None:intergenic 40.0%
! AACCCGAGTCTAAAATGAAG+AGG + Chr6:10577468-10577487 None:intergenic 40.0%
! AGCAAGAGCCTTTCACATTT+TGG - Chr6:10577674-10577693 MsG0680030858.01.T01:intron 40.0%
! AGCATATCAACAGTGCCTTT+TGG + Chr6:10577702-10577721 None:intergenic 40.0%
! CATTTAATATGCATAGCGGG+TGG - Chr6:10577195-10577214 MsG0680030858.01.T01:intron 40.0%
! CTTTCCATTTGGAGTTCTGT+TGG - Chr6:10579131-10579150 MsG0680030858.01.T01:intron 40.0%
! GCTTTCTGTTAGCTCTTATG+GGG - Chr6:10574985-10575004 MsG0680030858.01.T01:intron 40.0%
! GGGACAACATTGGTTATCAT+TGG + Chr6:10575591-10575610 None:intergenic 40.0%
!! GTGTGCGCCTTTTATTTACA+GGG + Chr6:10577525-10577544 None:intergenic 40.0%
!! TGTGTGCGCCTTTTATTTAC+AGG + Chr6:10577526-10577545 None:intergenic 40.0%
!!! GAGAGTTTTGGAAGTGATGA+AGG + Chr6:10574492-10574511 None:intergenic 40.0%
AAGAGCTTGGAACCTTTGGA+TGG + Chr6:10576352-10576371 None:intergenic 45.0%
ACAAACCGAAGTGGTGTCTA+TGG - Chr6:10578039-10578058 MsG0680030858.01.T01:intron 45.0%
ACAACCAATGTGCATTGGAC+TGG - Chr6:10578992-10579011 MsG0680030858.01.T01:intron 45.0%
ACATGGCTAATGACTTTCGC+TGG - Chr6:10578356-10578375 MsG0680030858.01.T01:intron 45.0%
AGATGACGATGATGCGGAAT+GGG - Chr6:10576789-10576808 MsG0680030858.01.T01:intron 45.0%
AGCAAGTTCTGTCTACACGA+TGG + Chr6:10577257-10577276 None:intergenic 45.0%
ATTACCTGGTGGCATGTACA+TGG - Chr6:10579066-10579085 MsG0680030858.01.T01:intron 45.0%
CAAACCGAAGTGGTGTCTAT+GGG - Chr6:10578040-10578059 MsG0680030858.01.T01:intron 45.0%
CAAAGGTTCCAAGCATCCAA+AGG - Chr6:10576454-10576473 MsG0680030858.01.T01:intron 45.0%
CGAGAACGAATCACTTACCT+AGG + Chr6:10577105-10577124 None:intergenic 45.0%
CTACTTCCAAGGGACAACAT+TGG + Chr6:10575601-10575620 None:intergenic 45.0%
CTCATGCATACACAGTTTCC+GGG + Chr6:10575224-10575243 None:intergenic 45.0%
CTTTGACAGGTGGTTCGATA+TGG + Chr6:10575864-10575883 None:intergenic 45.0%
CTTTGGATGCTTGGAACCTT+TGG + Chr6:10576456-10576475 None:intergenic 45.0%
GACATGTAAGACTCGTTTGG+TGG - Chr6:10577423-10577442 MsG0680030858.01.T01:intron 45.0%
GATGTTGTCACGTGACTGAA+CGG - Chr6:10575112-10575131 MsG0680030858.01.T01:intron 45.0%
GCTCATGCATACACAGTTTC+CGG + Chr6:10575225-10575244 None:intergenic 45.0%
GTCACGTGACTGAAATGTCA+CGG - Chr6:10575314-10575333 MsG0680030858.01.T01:intron 45.0%
GTGAGTGCTTCGTTATTGAG+AGG - Chr6:10574884-10574903 MsG0680030858.01.T01:CDS 45.0%
GTTGGAAACTGTATTACGGC+AGG - Chr6:10577044-10577063 MsG0680030858.01.T01:intron 45.0%
TAATGGTGCACCACTTTGAC+AGG + Chr6:10575877-10575896 None:intergenic 45.0%
TAGACCCATAGACACCACTT+CGG + Chr6:10578047-10578066 None:intergenic 45.0%
TATCGAACCACCTGTCAAAG+TGG - Chr6:10575864-10575883 MsG0680030858.01.T01:CDS 45.0%
TCACGTGACTGAAATGTCAC+GGG - Chr6:10575315-10575334 MsG0680030858.01.T01:intron 45.0%
TGGAAACTGTATTACGGCAG+GGG - Chr6:10577046-10577065 MsG0680030858.01.T01:intron 45.0%
TGTAGCAATTTGATGCTGGC+GGG - Chr6:10574936-10574955 MsG0680030858.01.T01:CDS 45.0%
TTACCTGGTGGCATGTACAT+GGG - Chr6:10579067-10579086 MsG0680030858.01.T01:intron 45.0%
TTACTGCTGCGTAGGTATAC+TGG - Chr6:10578151-10578170 MsG0680030858.01.T01:intron 45.0%
TTCCTAGAGGAACGAAGTGA+GGG - Chr6:10577729-10577748 MsG0680030858.01.T01:intron 45.0%
! ACTCGTTTGGTGGACAGAAT+AGG - Chr6:10577433-10577452 MsG0680030858.01.T01:intron 45.0%
! GACACCACTTCGGTTTGTAA+CGG + Chr6:10578037-10578056 None:intergenic 45.0%
! GCATTGAGGTATCAAACAGC+TGG - Chr6:10577018-10577037 MsG0680030858.01.T01:intron 45.0%
! GTTGAGTTGTGTTGCGACAA+TGG - Chr6:10574437-10574456 MsG0680030858.01.T01:three_prime_UTR 45.0%
! TAGCGGGTGGAAATAGTTAC+AGG - Chr6:10577208-10577227 MsG0680030858.01.T01:intron 45.0%
! TGCAGTTTTGCCTCGATAGT+TGG - Chr6:10578295-10578314 MsG0680030858.01.T01:intron 45.0%
! TTCTGGAGATGACGATGATG+CGG - Chr6:10576783-10576802 MsG0680030858.01.T01:intron 45.0%
!! CCGAGAAAGCATTTGCATTG+AGG - Chr6:10577004-10577023 MsG0680030858.01.T01:intron 45.0%
AAGTCACTGTCTCACTCACG+AGG - Chr6:10575759-10575778 MsG0680030858.01.T01:intron 50.0%
ACCAACTGAACACGAAAGGG+TGG + Chr6:10578789-10578808 None:intergenic 50.0%
ACCAGTCTTTGCCTCTTGTC+AGG + Chr6:10579166-10579185 None:intergenic 50.0%
ACCTGACAAGAGGCAAAGAC+TGG - Chr6:10579162-10579181 MsG0680030858.01.T01:intron 50.0%
AGCACTCACACTGACAACAC+TGG + Chr6:10574873-10574892 None:intergenic 50.0%
CACGTATGATGTCGAAGGCT+TGG - Chr6:10579189-10579208 MsG0680030858.01.T01:intron 50.0%
CATGCCAGGACACAGAGAAT+AGG - Chr6:10577977-10577996 MsG0680030858.01.T01:intron 50.0%
CGTTCCGTTACAAACCGAAG+TGG - Chr6:10578030-10578049 MsG0680030858.01.T01:intron 50.0%
CTCCTCTACTTGACAGTGCT+GGG - Chr6:10577757-10577776 MsG0680030858.01.T01:intron 50.0%
CTTCCTAGAGGAACGAAGTG+AGG - Chr6:10577728-10577747 MsG0680030858.01.T01:intron 50.0%
GAGATGACGATGATGCGGAA+TGG - Chr6:10576788-10576807 MsG0680030858.01.T01:intron 50.0%
GCTTGGAACCTTTGGATGCT+TGG + Chr6:10576465-10576484 None:intergenic 50.0%
GGAAACTGTATTACGGCAGG+GGG - Chr6:10577047-10577066 MsG0680030858.01.T01:intron 50.0%
GGATGCTTGGAACCTTTGGA+TGG + Chr6:10576452-10576471 None:intergenic 50.0%
GGCGAAATTTCAGATGCACC+TGG + Chr6:10576147-10576166 None:intergenic 50.0%
GGTTAGAGACACCTGACAAG+AGG - Chr6:10579152-10579171 MsG0680030858.01.T01:intron 50.0%
GTGCTTCGTTATTGAGAGGG+AGG - Chr6:10574888-10574907 MsG0680030858.01.T01:CDS 50.0%
GTTCGCACGTATGATGTCGA+AGG - Chr6:10579184-10579203 MsG0680030858.01.T01:intron 50.0%
TCCACCCTTTCGTGTTCAGT+TGG - Chr6:10578785-10578804 MsG0680030858.01.T01:intron 50.0%
TCCTAGAGGAACGAAGTGAG+GGG - Chr6:10577730-10577749 MsG0680030858.01.T01:intron 50.0%
TCCTCTACTTGACAGTGCTG+GGG - Chr6:10577758-10577777 MsG0680030858.01.T01:intron 50.0%
TCTACTTCCAGCCAGTACCA+CGG - Chr6:10575801-10575820 MsG0680030858.01.T01:CDS 50.0%
TGAAACTCAATGACGACCCG+TGG + Chr6:10575821-10575840 None:intergenic 50.0%
TGCATACACAGTTTCCGGGA+AGG + Chr6:10575220-10575239 None:intergenic 50.0%
TGGGTGGAGAGAAGATTGTG+TGG + Chr6:10578760-10578779 None:intergenic 50.0%
TGTACAGATGTGTTCCCTGC+AGG - Chr6:10576725-10576744 MsG0680030858.01.T01:intron 50.0%
TGTGCCAGTCCAATGCACAT+TGG + Chr6:10578999-10579018 None:intergenic 50.0%
TGTGGCACTCTTCTGATCGA+AGG - Chr6:10574771-10574790 MsG0680030858.01.T01:CDS 50.0%
TGTGTGCGAAAATCGGCAGT+AGG + Chr6:10577836-10577855 None:intergenic 50.0%
! AAAATGGTGGGACACCTTCC+CGG - Chr6:10575203-10575222 MsG0680030858.01.T01:intron 50.0%
! CTGCAAGAGCTTTAGTGCAC+CGG - Chr6:10575414-10575433 MsG0680030858.01.T01:intron 50.0%
! GTAAGGATTCAGACTGGCTG+TGG - Chr6:10576212-10576231 MsG0680030858.01.T01:CDS 50.0%
! TGCAAGAGCTTTAGTGCACC+GGG - Chr6:10575415-10575434 MsG0680030858.01.T01:intron 50.0%
!!! GGAAGGTGTCCCACCATTTT+TGG + Chr6:10575203-10575222 None:intergenic 50.0%
!!! TGCCGATTTTCGCACACACA+CGG - Chr6:10577838-10577857 MsG0680030858.01.T01:intron 50.0%
AAACACAGATGAGGGCAGCC+CGG + Chr6:10575436-10575455 None:intergenic 55.0%
AACAAGAGAAGGTCGGCGAG+AGG + Chr6:10577616-10577635 None:intergenic 55.0%
ACAAGAGAAGGTCGGCGAGA+GGG + Chr6:10577615-10577634 None:intergenic 55.0%
ACACGAAAGGGTGGAGCGAA+TGG + Chr6:10578780-10578799 None:intergenic 55.0%
ACCCCAGCACTGTCAAGTAG+AGG + Chr6:10577762-10577781 None:intergenic 55.0%
ACCCCTCACTTCGTTCCTCT+AGG + Chr6:10577734-10577753 None:intergenic 55.0%
CACGAAAGGGTGGAGCGAAT+GGG + Chr6:10578779-10578798 None:intergenic 55.0%
CATCCCATGTACATGCCACC+AGG + Chr6:10579073-10579092 None:intergenic 55.0%
CCAGCACTGTCAAGTAGAGG+AGG + Chr6:10577759-10577778 None:intergenic 55.0%
CCTCCTCTACTTGACAGTGC+TGG - Chr6:10577756-10577775 MsG0680030858.01.T01:intron 55.0%
CGGTGCACTAAAGCTCTTGC+AGG + Chr6:10575416-10575435 None:intergenic 55.0%
CTACTTCCAGCCAGTACCAC+GGG - Chr6:10575802-10575821 MsG0680030858.01.T01:CDS 55.0%
GCCCGTGTGTGTGCGAAAAT+CGG + Chr6:10577843-10577862 None:intergenic 55.0%
GTATTACGGCAGGGGGTTCT+TGG - Chr6:10577054-10577073 MsG0680030858.01.T01:intron 55.0%
GTGTGCTTTCGAGACTGCAG+AGG - Chr6:10576385-10576404 MsG0680030858.01.T01:intron 55.0%
TCAATGACGACCCGTGGTAC+TGG + Chr6:10575815-10575834 None:intergenic 55.0%
TGGTGCACCACTTTGACAGG+TGG + Chr6:10575874-10575893 None:intergenic 55.0%
! GGATTCAGACTGGCTGTGGT+CGG - Chr6:10576216-10576235 MsG0680030858.01.T01:CDS 55.0%
!! GCCGATTTTCGCACACACAC+GGG - Chr6:10577839-10577858 MsG0680030858.01.T01:intron 55.0%
CTCACTCACGAGGACGACGA+GGG - Chr6:10575769-10575788 MsG0680030858.01.T01:intron 60.0%
GAAAGGGTGGAGCGAATGGG+TGG + Chr6:10578776-10578795 None:intergenic 60.0%
TCTCACTCACGAGGACGACG+AGG - Chr6:10575768-10575787 MsG0680030858.01.T01:intron 60.0%
!! TGACGACCCGTGGTACTGGC+TGG + Chr6:10575811-10575830 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr6 gene 10574417 10579512 10574417 ID=MsG0680030858.01;Name=MsG0680030858.01
Chr6 mRNA 10574417 10579512 10574417 ID=MsG0680030858.01.T01;Parent=MsG0680030858.01;Name=MsG0680030858.01.T01;_AED=0.44;_eAED=0.44;_QI=0|1|1|1|0.66|0.71|7|263|413
Chr6 exon 10574417 10574970 10574417 ID=MsG0680030858.01.T01:exon:8087;Parent=MsG0680030858.01.T01
Chr6 exon 10575801 10575944 10575801 ID=MsG0680030858.01.T01:exon:8086;Parent=MsG0680030858.01.T01
Chr6 exon 10576150 10576330 10576150 ID=MsG0680030858.01.T01:exon:8085;Parent=MsG0680030858.01.T01
Chr6 exon 10576823 10576941 10576823 ID=MsG0680030858.01.T01:exon:8084;Parent=MsG0680030858.01.T01
Chr6 exon 10577065 10577182 10577065 ID=MsG0680030858.01.T01:exon:8083;Parent=MsG0680030858.01.T01
Chr6 exon 10578894 10578988 10578894 ID=MsG0680030858.01.T01:exon:8082;Parent=MsG0680030858.01.T01
Chr6 exon 10579219 10579512 10579219 ID=MsG0680030858.01.T01:exon:8081;Parent=MsG0680030858.01.T01
Chr6 CDS 10579219 10579512 10579219 ID=MsG0680030858.01.T01:cds;Parent=MsG0680030858.01.T01
Chr6 CDS 10578894 10578988 10578894 ID=MsG0680030858.01.T01:cds;Parent=MsG0680030858.01.T01
Chr6 CDS 10577065 10577182 10577065 ID=MsG0680030858.01.T01:cds;Parent=MsG0680030858.01.T01
Chr6 CDS 10576823 10576941 10576823 ID=MsG0680030858.01.T01:cds;Parent=MsG0680030858.01.T01
Chr6 CDS 10576150 10576330 10576150 ID=MsG0680030858.01.T01:cds;Parent=MsG0680030858.01.T01
Chr6 CDS 10575801 10575944 10575801 ID=MsG0680030858.01.T01:cds;Parent=MsG0680030858.01.T01
Chr6 CDS 10574680 10574970 10574680 ID=MsG0680030858.01.T01:cds;Parent=MsG0680030858.01.T01
Chr6 three_prime_UTR 10574417 10574679 10574417 ID=MsG0680030858.01.T01:three_prime_utr;Parent=MsG0680030858.01.T01
Gene Sequence

>MsG0680030858.01.T01

AAGGTAGAACAGTTGCAACAGTTGAGTTGTGTTGCGACAATGGCTTCTTCACTTCATTGCTCTGTTTCACTTCCTTCATCACTTCCAAAACTCTCCAATTTCAACTTCAACACCAACAACAAATTCTTCTCATTCAACCCATCATCAAATTCAAACGCTATCTCTACAATCAAATGTTCAGCTTCTTCTTTTTCATCTTTCTCTTCAACATCACTTGATGAAACTGCTATGAGCATTGAAAATCTACGTAGCTTCATCAACCTTAATATCGGAAAATGGAACGGTTCTTTCTATCAATTTGATGCTGGCGGGAATCTGTTGCAACGAGTGAGTACTAAGCTTTCTGTTAGCTCTTATGGGGAAGATGAACTGATGAGTCTCATTCAATCGCTGTACATTAAACAACCTTCATCAAACACTTCAGTTTCTGGAGATGACGATGATGCGGAATGGGCAGAGTACAAAATTAAAGAAACCAATATGTTTACTGTTGACAAGTACCAACAAATAGGCTTTTTCCCATCCGAGAAAGCATTTGCATTGAGGTATCAAACAGCTGGTATGTTGGAAACTGTATTACGGCAGGGGGTTCTTGGAGAAGATGACATTGGTGAAGAATCACCTAGAAATCTCAAACTTCCCTCTCGCCGACCTTCTCTTGTTTGTGAGAATTGCCTGTACTCTTTACAAAGAGATATGCGAGCAAGAGCCTTTCACATTTTGGAGCCAAAAGGCACTGTTGATATGCTTATCATCTTCCTAGAGGAACGAAGTGAGGGGTCTCCTCCTCTACTTGACAGTGCTGGGGACACAGAGAATAGGATTACACCATTTCTTGGTAAATGGAAAGGTCGTTCCGTTACAAACCGAAGTGGTGTCTATGGGTCTACGATTTCTGAAGCAGATACAGTTGTGTTACATGAGATGAATGACAATGGCCAACTTATTCAGGATGTTACTTGTACATCTGATGAGGCAAATGTTACAACCAATGTGCATTGGACTGGCACAATATCAGACAATTTAGTCACATTTGATGGAGGTTATCAAATGATTCTATTACCTGGTGGCATGTACATGGGATGTCCTTGTGATGTTGCAAAAAGTGTGGCACAATCAAAATCTTTCCATTTGGAGTTCTGTTGGTTAGAGACACCTGACAAGAGGCAAAGACTGGTTCGCACGTATGATGTCGAAGGCTTGGCCGTCTCATCTACTTATTTTATTGAGACAAAATTGTGA

Protein sequence

>MsG0680030858.01.T01

KVEQLQQLSCVATMASSLHCSVSLPSSLPKLSNFNFNTNNKFFSFNPSSNSNAISTIKCSASSFSSFSSTSLDETAMSIENLRSFINLNIGKWNGSFYQFDAGGNLLQRVSTKLSVSSYGEDELMSLIQSLYIKQPSSNTSVSGDDDDAEWAEYKIKETNMFTVDKYQQIGFFPSEKAFALRYQTAGMLETVLRQGVLGEDDIGEESPRNLKLPSRRPSLVCENCLYSLQRDMRARAFHILEPKGTVDMLIIFLEERSEGSPPLLDSAGDTENRITPFLGKWKGRSVTNRSGVYGSTISEADTVVLHEMNDNGQLIQDVTCTSDEANVTTNVHWTGTISDNLVTFDGGYQMILLPGGMYMGCPCDVAKSVAQSKSFHLEFCWLETPDKRQRLVRTYDVEGLAVSSTYFIETKL*