AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280008922.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280008922.01.T01 MTR_2g460600 85.143 350 17 1 6 320 197 546 0.0 565
MsG0280008922.01.T01 MTR_7g094800 28.384 229 153 5 7 225 187 414 1.58e-17 83.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280008922.01.T01 AT2G18710 73.143 350 59 2 6 320 200 549 3.78e-175 496
MsG0280008922.01.T01 AT2G31530 30.435 230 147 6 7 225 215 442 2.13e-15 77.0

Find 132 sgRNAs with CRISPR-Local

Find 257 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTGCTTACCTACCGTTTA+AGG 0.117513 2:+41599473 MsG0280008922.01.T01:CDS
TTATCAATCAATGGAAATTA+TGG 0.209023 2:+41600695 MsG0280008922.01.T01:three_prime_UTR
GAGGATAGTTCAATTGATTT+TGG 0.223790 2:+41597809 MsG0280008922.01.T01:five_prime_UTR
ATGGAAATTATGGATATAAA+AGG 0.233988 2:+41600705 MsG0280008922.01.T01:three_prime_UTR
CGTTGTTTATGTAAAGTTCT+TGG 0.245021 2:+41600826 MsG0280008922.01.T01:three_prime_UTR
TGCACACTTGACTGCATTCC+GGG 0.270529 2:+41600392 MsG0280008922.01.T01:CDS
AGGTTCCATTCCCAAGTTTC+AGG 0.271250 2:-41599150 None:intergenic
TCTTACTTGCCAGCTTCTTT+TGG 0.293036 2:+41599199 MsG0280008922.01.T01:CDS
AATCTAGACGCGTAGTTAAT+AGG 0.304266 2:-41599423 None:intergenic
TCTTAGTCGAATATCAGTTC+TGG 0.312877 2:+41600317 MsG0280008922.01.T01:CDS
ACTGCATTCCGGGGATTTGC+TGG 0.320442 2:+41600402 MsG0280008922.01.T01:CDS
ACATCTATTCTTATTCTTGT+TGG 0.328592 2:+41600426 MsG0280008922.01.T01:CDS
CTGCACACTTGACTGCATTC+CGG 0.330585 2:+41600391 MsG0280008922.01.T01:CDS
GTTCTATTCCAATTCTTGTC+TGG 0.333835 2:+41600864 MsG0280008922.01.T01:three_prime_UTR
CATTTGAAAATGAGGCAAAA+TGG 0.336544 2:-41597654 None:intergenic
AGAATGTAGAACGTCAAAAT+AGG 0.337198 2:-41600772 None:intergenic
AAACAAGACCAGACAAGAAT+TGG 0.344087 2:-41600872 None:intergenic
GGAAACAACCAATCATTTAA+TGG 0.350131 2:-41600540 None:intergenic
TCCTTCTTTCTGTTGGTAGT+TGG 0.350967 2:+41599283 MsG0280008922.01.T01:CDS
GGCAAGCCGTGGCTCGTGGC+CGG 0.353467 2:+41600728 MsG0280008922.01.T01:three_prime_UTR
TACATAATATATGCAAGGTC+TGG 0.364346 2:+41600949 MsG0280008922.01.T01:three_prime_UTR
AGTATTGACCATTAAATGAT+TGG 0.370320 2:+41600532 MsG0280008922.01.T01:exon
ACATCATCGTTAGCTCTTCC+TGG 0.375335 2:+41599673 MsG0280008922.01.T01:CDS
GCAGTCTGCTCAACAATTGC+AGG 0.392772 2:-41600372 None:intergenic
GCAAGCCGTGGCTCGTGGCC+GGG 0.400570 2:+41600729 MsG0280008922.01.T01:three_prime_UTR
CAAATTACTGACCTGAAACT+TGG 0.408846 2:+41599139 MsG0280008922.01.T01:CDS
CCGTGATTACAACGTACATT+GGG 0.408942 2:+41599113 MsG0280008922.01.T01:CDS
GGTATGTGGTTGGTTTATCT+CGG 0.411194 2:+41599760 MsG0280008922.01.T01:CDS
CTTAGTCGAATATCAGTTCT+GGG 0.412406 2:+41600318 MsG0280008922.01.T01:CDS
ACTCGTGAGCTTAGCTCAAT+TGG 0.413499 2:+41600917 MsG0280008922.01.T01:three_prime_UTR
TTCTGAAGATCTTGCAACTT+GGG 0.415468 2:-41598085 None:intergenic
TGGAAATTATGGATATAAAA+GGG 0.417334 2:+41600706 MsG0280008922.01.T01:three_prime_UTR
TTCTTCAAAGGTCCTCTGCC+AGG 0.418038 2:+41597836 MsG0280008922.01.T01:five_prime_UTR
CATTGTGTCCTTCTTTCTGT+TGG 0.429476 2:+41599276 MsG0280008922.01.T01:CDS
TGCTCTGCAAAATTATATAC+AGG 0.433383 2:-41600597 None:intergenic
AGTTGGAATTGTCTATGTTC+AGG 0.434605 2:+41599300 MsG0280008922.01.T01:CDS
TTTGGCAGGTCAATAGTTCT+GGG 0.435453 2:+41599629 MsG0280008922.01.T01:intron
CCTTCTCCCGGTGGTGTGTC+CGG 0.435503 2:+41597494 MsG0280008922.01.T01:five_prime_UTR
CGGACACACCACCGGGAGAA+GGG 0.438125 2:-41597493 None:intergenic
ACATAATATATGCAAGGTCT+GGG 0.446925 2:+41600950 MsG0280008922.01.T01:three_prime_UTR
ATTGTTCTGCTTGAAATGTC+TGG 0.448247 2:+41599798 MsG0280008922.01.T01:CDS
AGGAGTAGCAGCTGCAATAG+AGG 0.448637 2:+41597790 MsG0280008922.01.T01:five_prime_UTR
AGACTTGGCATATGCTCTCT+TGG 0.449449 2:+41598008 MsG0280008922.01.T01:exon
ACCAATACCACCACCAGAAA+AGG 0.461774 2:-41597985 None:intergenic
TTTCTTGTATTGTCAAGGCT+TGG 0.462644 2:+41597881 MsG0280008922.01.T01:five_prime_UTR
TGTTGGATTCGCCATTGTAC+AGG 0.467660 2:+41598162 MsG0280008922.01.T01:CDS
TACACTCGATATGCTTCTGT+TGG 0.467789 2:+41598145 MsG0280008922.01.T01:CDS
TAGGGTTTCTTGTATTGTCA+AGG 0.468985 2:+41597876 MsG0280008922.01.T01:five_prime_UTR
TCTGTAATGTAAAGATCAAT+CGG 0.473409 2:+41600639 MsG0280008922.01.T01:three_prime_UTR
GATGATGTAGAAAATATGAT+AGG 0.473627 2:-41599658 None:intergenic
GTATGTGGTTGGTTTATCTC+GGG 0.476596 2:+41599761 MsG0280008922.01.T01:CDS
GGTACTTTAGCACGTTTCAC+TGG 0.478650 2:+41599694 MsG0280008922.01.T01:CDS
AAAGATGAGAGGACCTTAAA+CGG 0.479005 2:-41599486 None:intergenic
TTTCTGAAGATCTTGCAACT+TGG 0.479036 2:-41598086 None:intergenic
GAACTAGGTTTATCAATCAA+TGG 0.481868 2:+41600686 MsG0280008922.01.T01:three_prime_UTR
TCAGTTGTTTGCATAGAACT+AGG 0.486363 2:+41600671 MsG0280008922.01.T01:three_prime_UTR
TGTTGTAAAGTCATTTACAT+AGG 0.488090 2:-41599050 None:intergenic
ATTACTCTTCTTCTTCTACA+TGG 0.489877 2:+41597720 MsG0280008922.01.T01:five_prime_UTR
GTTCTATGCAAACAACTGAA+TGG 0.491612 2:-41600667 None:intergenic
GAAGAAGAGTAATACCTAAC+GGG 0.496614 2:-41597710 None:intergenic
TCTGTTATCTTATTGACACT+TGG 0.501427 2:+41599088 MsG0280008922.01.T01:CDS
CAGAAAAGAGAAGGTGAGGC+TGG 0.502761 2:+41598103 MsG0280008922.01.T01:CDS
TGAGAGGACGATTATTAAGC+CGG 0.504157 2:-41597513 None:intergenic
ATACAATCCATTTGAAAATG+AGG 0.504997 2:-41597662 None:intergenic
CCGGACACACCACCGGGAGA+AGG 0.505855 2:-41597494 None:intergenic
TATTAAGCCGGACACACCAC+CGG 0.511267 2:-41597501 None:intergenic
CTTTGAATCCAGGAGGTATG+TGG 0.514270 2:+41599746 MsG0280008922.01.T01:CDS
GGACACACCACCGGGAGAAG+GGG 0.517072 2:-41597492 None:intergenic
GTGAAGTGAAGTGGTGGTTG+TGG 0.518973 2:+41597438 MsG0280008922.01.T01:five_prime_UTR
TCCGTGATTACAACGTACAT+TGG 0.519948 2:+41599112 MsG0280008922.01.T01:CDS
TTGAGAAACTTCCCTGGCAG+AGG 0.521457 2:-41597848 None:intergenic
GTAGCGAATTTCGACCCGTT+AGG 0.521598 2:+41597696 MsG0280008922.01.T01:five_prime_UTR
GTGAGCTTAGCTCAATTGGT+AGG 0.524323 2:+41600921 MsG0280008922.01.T01:three_prime_UTR
TGGCTCGTGGCCGGGTGATG+TGG 0.524927 2:+41600737 MsG0280008922.01.T01:three_prime_UTR
CAAACAACTGCCACATCACC+CGG 0.527409 2:-41600747 None:intergenic
GCTGCAGTAGCTTTGAATCC+AGG 0.527425 2:+41599736 MsG0280008922.01.T01:CDS
TAAACCAACCACATACCTCC+TGG 0.529042 2:-41599754 None:intergenic
GTTGTAAAGTCATTTACATA+GGG 0.531063 2:-41599049 None:intergenic
AAATTACTGACCTGAAACTT+GGG 0.532762 2:+41599140 MsG0280008922.01.T01:CDS
GGTGGTGGTATTGGTAGACT+TGG 0.533736 2:+41597993 MsG0280008922.01.T01:five_prime_UTR
ATGTAAAGTTCTTGGCAACA+AGG 0.537673 2:+41600834 MsG0280008922.01.T01:three_prime_UTR
CTCAACCTCATCTCTCTACC+AGG 0.538600 2:+41597593 MsG0280008922.01.T01:intron
CCCAATGTACGTTGTAATCA+CGG 0.539847 2:-41599113 None:intergenic
TCCAACTACCAACAGAAAGA+AGG 0.539872 2:-41599284 None:intergenic
AAGGTCTGGGGTTCAAACCC+CGG 0.541783 2:+41600963 MsG0280008922.01.T01:three_prime_UTR
CAGAAAGAAGGACACAATGA+TGG 0.551543 2:-41599272 None:intergenic
ACTGACCTGAAACTTGGGAA+TGG 0.555203 2:+41599145 MsG0280008922.01.T01:CDS
CATCACCCGGCCACGAGCCA+CGG 0.557008 2:-41600734 None:intergenic
ACAATCTGTGCATTGATGAA+AGG 0.557062 2:-41598037 None:intergenic
ATTAAGCCGGACACACCACC+GGG 0.558840 2:-41597500 None:intergenic
ATGGAAGAAGATTGTTTGAG+AGG 0.560970 2:-41597529 None:intergenic
AATGTCCGACCAAAAGAAGC+TGG 0.561861 2:-41599208 None:intergenic
GGTAACAAGTCCGACATAGT+TGG 0.563139 2:-41599251 None:intergenic
GGCTTGGTGTGTATACCTCT+AGG 0.565520 2:+41597897 MsG0280008922.01.T01:five_prime_UTR
TCTTCAGAAAAGAGAAGGTG+AGG 0.569860 2:+41598099 MsG0280008922.01.T01:CDS
CAAGATCTTCAGAAAAGAGA+AGG 0.570295 2:+41598094 MsG0280008922.01.T01:CDS
GAATCCAGGAGGTATGTGGT+TGG 0.575015 2:+41599750 MsG0280008922.01.T01:CDS
AAAGAAGCTTCCCCTTCTCC+CGG 0.575067 2:+41597482 MsG0280008922.01.T01:five_prime_UTR
GGAAATTATGGATATAAAAG+GGG 0.578428 2:+41600707 MsG0280008922.01.T01:three_prime_UTR
TTTAATGATGCCAACTATGT+CGG 0.578808 2:+41599241 MsG0280008922.01.T01:CDS
AAGGGGCAAGCCGTGGCTCG+TGG 0.579714 2:+41600724 MsG0280008922.01.T01:three_prime_UTR
GCACACTTGACTGCATTCCG+GGG 0.581736 2:+41600393 MsG0280008922.01.T01:CDS
TAGATGTTCCAGCAAATCCC+CGG 0.583086 2:-41600410 None:intergenic
TCTTCAAAGGTCCTCTGCCA+GGG 0.584956 2:+41597837 MsG0280008922.01.T01:five_prime_UTR
AGAAGAAGAGTAATACCTAA+CGG 0.588299 2:-41597711 None:intergenic
TGAGCTTAGCTCAATTGGTA+GGG 0.593859 2:+41600922 MsG0280008922.01.T01:three_prime_UTR
GTTTGTGAATATCAAAAGAG+AGG 0.599776 2:-41599170 None:intergenic
AGGGACGCAGGAAAAGAACT+TGG 0.600736 2:-41599030 None:intergenic
GACAATACATAATATATGCA+AGG 0.602559 2:+41600944 MsG0280008922.01.T01:three_prime_UTR
ATGAGAGGACCTTAAACGGT+AGG 0.606091 2:-41599482 None:intergenic
TAAATTTCTGACCTGTACAA+TGG 0.607947 2:-41598173 None:intergenic
TCTAGATTCACCAGCAAAAG+CGG 0.612020 2:+41599438 MsG0280008922.01.T01:CDS
GTGAAACGTGCTAAAGTACC+AGG 0.612842 2:-41599691 None:intergenic
AACTATAATTCTGTAGACAA+AGG 0.613035 2:-41600561 None:intergenic
AAAAGCTTGAGAAACTTCCC+TGG 0.613913 2:-41597854 None:intergenic
GATATAAAAGGGGCAAGCCG+TGG 0.622664 2:+41600717 MsG0280008922.01.T01:three_prime_UTR
AAATGACTTTACAACAGAGT+GGG 0.636424 2:+41599057 MsG0280008922.01.T01:CDS
TTGGCAGGTCAATAGTTCTG+GGG 0.643969 2:+41599630 MsG0280008922.01.T01:intron
AGTCATTTACATAGGGACGC+AGG 0.644501 2:-41599042 None:intergenic
GAAGCTTCCCCTTCTCCCGG+TGG 0.654414 2:+41597485 MsG0280008922.01.T01:five_prime_UTR
TAAATGACTTTACAACAGAG+TGG 0.657979 2:+41599056 MsG0280008922.01.T01:CDS
GCTGCTACTCCTCCTCCTCG+AGG 0.659044 2:-41597779 None:intergenic
AGATTCACCAGCAAAAGCGG+TGG 0.659232 2:+41599441 MsG0280008922.01.T01:CDS
TGGGAAGAAGTGAAGTGAAG+TGG 0.660930 2:+41597429 MsG0280008922.01.T01:five_prime_UTR
CGTGATTACAACGTACATTG+GGG 0.663302 2:+41599114 MsG0280008922.01.T01:CDS
AACTAAGTGTGTATGTCATG+TGG 0.679981 2:+41601033 MsG0280008922.01.T01:three_prime_UTR
CATAATATATGCAAGGTCTG+GGG 0.680329 2:+41600951 MsG0280008922.01.T01:three_prime_UTR
GAAGAAGTGAAGTGAAGTGG+TGG 0.704245 2:+41597432 MsG0280008922.01.T01:five_prime_UTR
GCAGTAGCTTTGAATCCAGG+AGG 0.714613 2:+41599739 MsG0280008922.01.T01:CDS
TTGGTGTGTATACCTCTAGG+TGG 0.714673 2:+41597900 MsG0280008922.01.T01:five_prime_UTR
TCTCTGTTAACTCCACCTAG+AGG 0.718674 2:-41597912 None:intergenic
TCTAGGTGGAGTTAACAGAG+AGG 0.738479 2:+41597914 MsG0280008922.01.T01:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATATAAAATATAATATA+TGG + Chr2:41600287-41600306 MsG0280008922.01.T01:intron 0.0%
!! AAAAAATGTACATTTAAGTA+AGG - Chr2:41600001-41600020 None:intergenic 15.0%
!! AAAAATGTACATTTAAGTAA+GGG - Chr2:41600000-41600019 None:intergenic 15.0%
!! AACAAAAACAAAATTATAAC+TGG - Chr2:41598984-41599003 None:intergenic 15.0%
!! TTGATTTCAAAATTAATTCA+TGG - Chr2:41598623-41598642 None:intergenic 15.0%
!!! AAATGTACATTTTTTTTTGT+AGG + Chr2:41600006-41600025 MsG0280008922.01.T01:intron 15.0%
!!! ATGAATTAATTTTGAAATCA+AGG + Chr2:41598622-41598641 MsG0280008922.01.T01:intron 15.0%
!!! TGAATTAATTTTGAAATCAA+GGG + Chr2:41598623-41598642 MsG0280008922.01.T01:intron 15.0%
!! AAACTTTGAATAAATCATGA+AGG - Chr2:41598451-41598470 None:intergenic 20.0%
!! AGAAATGTTTGATGAAATAT+AGG + Chr2:41599894-41599913 MsG0280008922.01.T01:intron 20.0%
!! AGTAGAAAAGATTTATGTTA+GGG + Chr2:41598578-41598597 MsG0280008922.01.T01:intron 20.0%
!! ATATTGTAATTACTGCATTT+AGG + Chr2:41598702-41598721 MsG0280008922.01.T01:intron 20.0%
!! ATGGAAATTATGGATATAAA+AGG + Chr2:41600705-41600724 MsG0280008922.01.T01:three_prime_UTR 20.0%
!! ATTAAGTGATGTAAAATGAA+TGG - Chr2:41600272-41600291 None:intergenic 20.0%
!! TAAAATATAATATATGGTGC+AGG + Chr2:41600293-41600312 MsG0280008922.01.T01:intron 20.0%
!! TATTGTAATTACTGCATTTA+GGG + Chr2:41598703-41598722 MsG0280008922.01.T01:intron 20.0%
!! TATTTGAATTCATGAAGAAA+AGG - Chr2:41598263-41598282 None:intergenic 20.0%
!! TGGAAATTATGGATATAAAA+GGG + Chr2:41600706-41600725 MsG0280008922.01.T01:three_prime_UTR 20.0%
!! TTATCAATCAATGGAAATTA+TGG + Chr2:41600695-41600714 MsG0280008922.01.T01:three_prime_UTR 20.0%
! AACATCTACATTGTCAAATT+TGG - Chr2:41599605-41599624 None:intergenic 25.0%
! AACTATAATTCTGTAGACAA+AGG - Chr2:41600564-41600583 None:intergenic 25.0%
! ACATCTATTCTTATTCTTGT+TGG + Chr2:41600426-41600445 MsG0280008922.01.T01:CDS 25.0%
! AGTAATTACAATATAGAGGA+GGG - Chr2:41598696-41598715 None:intergenic 25.0%
! ATACAATCCATTTGAAAATG+AGG - Chr2:41597665-41597684 None:intergenic 25.0%
! ATGCAGTAATTACAATATAG+AGG - Chr2:41598700-41598719 None:intergenic 25.0%
! ATTAATCAGTAAGGAAATCA+AGG - Chr2:41600225-41600244 None:intergenic 25.0%
! GACAATACATAATATATGCA+AGG + Chr2:41600944-41600963 MsG0280008922.01.T01:three_prime_UTR 25.0%
! GAGTAGAAAAGATTTATGTT+AGG + Chr2:41598577-41598596 MsG0280008922.01.T01:intron 25.0%
! GATGATGTAGAAAATATGAT+AGG - Chr2:41599661-41599680 None:intergenic 25.0%
! GGAAATTATGGATATAAAAG+GGG + Chr2:41600707-41600726 MsG0280008922.01.T01:three_prime_UTR 25.0%
! GTTGTAAAGTCATTTACATA+GGG - Chr2:41599052-41599071 None:intergenic 25.0%
! TAAGTAAGGGAATCAATTTA+TGG - Chr2:41599987-41600006 None:intergenic 25.0%
! TATAACCAAGAGTCATTAAT+AGG - Chr2:41598743-41598762 None:intergenic 25.0%
! TATCAAATACTATTCGAGTA+AGG - Chr2:41599539-41599558 None:intergenic 25.0%
! TATGTTAAATGGAAGATAGA+AGG - Chr2:41600034-41600053 None:intergenic 25.0%
! TCTGTAATGTAAAGATCAAT+CGG + Chr2:41600639-41600658 MsG0280008922.01.T01:three_prime_UTR 25.0%
! TCTTGTGAGATAATGTTAAA+AGG + Chr2:41598500-41598519 MsG0280008922.01.T01:intron 25.0%
! TGTTGTAAAGTCATTTACAT+AGG - Chr2:41599053-41599072 None:intergenic 25.0%
!! ACAATGTAGATGTTCTATTT+TGG + Chr2:41599611-41599630 MsG0280008922.01.T01:intron 25.0%
!! GCTATCAAAAGTATGTTAAA+TGG - Chr2:41600045-41600064 None:intergenic 25.0%
!! TAACTTTAAAGAGTTACTCT+TGG + Chr2:41598659-41598678 MsG0280008922.01.T01:intron 25.0%
!! TGTTCTTCAATTTTCATTAC+AGG + Chr2:41599000-41599019 MsG0280008922.01.T01:intron 25.0%
!!! AGTATTGACCATTAAATGAT+TGG + Chr2:41600532-41600551 MsG0280008922.01.T01:exon 25.0%
!!! TACGACAACTGTATTTTTTT+TGG - Chr2:41600992-41601011 None:intergenic 25.0%
!!! TCTTATTCTTTGAGATTCAT+AGG + Chr2:41598417-41598436 MsG0280008922.01.T01:intron 25.0%
AAATGACTTTACAACAGAGT+GGG + Chr2:41599057-41599076 MsG0280008922.01.T01:CDS 30.0%
AAATTACTGACCTGAAACTT+GGG + Chr2:41599140-41599159 MsG0280008922.01.T01:CDS 30.0%
AACCAGCATATTAATCAGTA+AGG - Chr2:41600234-41600253 None:intergenic 30.0%
ACATAATATATGCAAGGTCT+GGG + Chr2:41600950-41600969 MsG0280008922.01.T01:three_prime_UTR 30.0%
ACTATTACACTTTCCTACAA+TGG + Chr2:41600076-41600095 MsG0280008922.01.T01:intron 30.0%
AGAAGAAGAGTAATACCTAA+CGG - Chr2:41597714-41597733 None:intergenic 30.0%
AGAATGTAGAACGTCAAAAT+AGG - Chr2:41600775-41600794 None:intergenic 30.0%
AGTGTAATAGTAGTTGAAGA+AGG - Chr2:41600067-41600086 None:intergenic 30.0%
ATCTACATTGTCAAATTTGG+AGG - Chr2:41599602-41599621 None:intergenic 30.0%
ATGGAAGAGACAAAGTTTAA+GGG - Chr2:41599968-41599987 None:intergenic 30.0%
ATTACTCTTCTTCTTCTACA+TGG + Chr2:41597720-41597739 MsG0280008922.01.T01:five_prime_UTR 30.0%
ATTGAACGACTCCTATAATT+CGG - Chr2:41598349-41598368 None:intergenic 30.0%
ATTGTCCTATTAATGACTCT+TGG + Chr2:41598735-41598754 MsG0280008922.01.T01:intron 30.0%
CAAGTGAAAAATGTCTTCAT+AGG + Chr2:41598285-41598304 MsG0280008922.01.T01:intron 30.0%
CAGTAATTACAATATAGAGG+AGG - Chr2:41598697-41598716 None:intergenic 30.0%
CATTTGAAAATGAGGCAAAA+TGG - Chr2:41597657-41597676 None:intergenic 30.0%
CGTTGTTTATGTAAAGTTCT+TGG + Chr2:41600826-41600845 MsG0280008922.01.T01:three_prime_UTR 30.0%
CTACAGTAACATAAAAAGGT+TGG - Chr2:41599514-41599533 None:intergenic 30.0%
GAACTAGGTTTATCAATCAA+TGG + Chr2:41600686-41600705 MsG0280008922.01.T01:three_prime_UTR 30.0%
GCGACTAAATTACATATTGA+TGG - Chr2:41598772-41598791 None:intergenic 30.0%
GGAAACAACCAATCATTTAA+TGG - Chr2:41600543-41600562 None:intergenic 30.0%
GGTACTACAGTAACATAAAA+AGG - Chr2:41599518-41599537 None:intergenic 30.0%
GTTTGTGAATATCAAAAGAG+AGG - Chr2:41599173-41599192 None:intergenic 30.0%
TAAATGACTTTACAACAGAG+TGG + Chr2:41599056-41599075 MsG0280008922.01.T01:CDS 30.0%
TAAATTTCTGACCTGTACAA+TGG - Chr2:41598176-41598195 None:intergenic 30.0%
TACATAATATATGCAAGGTC+TGG + Chr2:41600949-41600968 MsG0280008922.01.T01:three_prime_UTR 30.0%
TATGGAAGAGACAAAGTTTA+AGG - Chr2:41599969-41599988 None:intergenic 30.0%
TCTGTTATCTTATTGACACT+TGG + Chr2:41599088-41599107 MsG0280008922.01.T01:CDS 30.0%
TCTTCATGAATGATTCGTAA+AGG + Chr2:41598316-41598335 MsG0280008922.01.T01:intron 30.0%
TGAAATCAAGGGATATGATT+TGG + Chr2:41598634-41598653 MsG0280008922.01.T01:intron 30.0%
TGCTCTGCAAAATTATATAC+AGG - Chr2:41600600-41600619 None:intergenic 30.0%
TTTAATGATGCCAACTATGT+CGG + Chr2:41599241-41599260 MsG0280008922.01.T01:CDS 30.0%
! CAATTTTCATTACAGGCTAT+TGG + Chr2:41599007-41599026 MsG0280008922.01.T01:intron 30.0%
! CATTTTGCCTCATTTTCAAA+TGG + Chr2:41597655-41597674 MsG0280008922.01.T01:five_prime_UTR 30.0%
! CTTTCTTGGAAAGTGTAAAT+GGG + Chr2:41598821-41598840 MsG0280008922.01.T01:intron 30.0%
! GATGTTAAACCTTTTGCATT+TGG + Chr2:41599832-41599851 MsG0280008922.01.T01:intron 30.0%
! TATGCTGGTTAAAGAACTAT+TGG + Chr2:41600244-41600263 MsG0280008922.01.T01:intron 30.0%
! TCTTTCTTGGAAAGTGTAAA+TGG + Chr2:41598820-41598839 MsG0280008922.01.T01:intron 30.0%
! TTCCTTACTGATTAATATGC+TGG + Chr2:41600229-41600248 MsG0280008922.01.T01:intron 30.0%
! TTTCTTGGAAAGTGTAAATG+GGG + Chr2:41598822-41598841 MsG0280008922.01.T01:intron 30.0%
!! ACTCTATGTTTTTGTACTTC+TGG - Chr2:41600497-41600516 None:intergenic 30.0%
!! ATCCATGCTTTTTAATAGCT+AGG + Chr2:41598914-41598933 MsG0280008922.01.T01:intron 30.0%
!! CTCTATGTTTTTGTACTTCT+GGG - Chr2:41600496-41600515 None:intergenic 30.0%
!! GAGGATAGTTCAATTGATTT+TGG + Chr2:41597809-41597828 MsG0280008922.01.T01:five_prime_UTR 30.0%
!!! GACAACTGTATTTTTTTTGG+TGG - Chr2:41600989-41601008 None:intergenic 30.0%
!!! TTCAACATTTTTGGCAATCT+TGG + Chr2:41600341-41600360 MsG0280008922.01.T01:CDS 30.0%
AAACAAGACCAGACAAGAAT+TGG - Chr2:41600875-41600894 None:intergenic 35.0%
AAAGATGAGAGGACCTTAAA+CGG - Chr2:41599489-41599508 None:intergenic 35.0%
AACTAAGTGTGTATGTCATG+TGG + Chr2:41601033-41601052 MsG0280008922.01.T01:three_prime_UTR 35.0%
AAGGTTTAACATCGAATGTC+AGG - Chr2:41599825-41599844 None:intergenic 35.0%
AATAATTAGCTGTACTCTGC+CGG - Chr2:41600163-41600182 None:intergenic 35.0%
AATCTAGACGCGTAGTTAAT+AGG - Chr2:41599426-41599445 None:intergenic 35.0%
AGTTGGAATTGTCTATGTTC+AGG + Chr2:41599300-41599319 MsG0280008922.01.T01:CDS 35.0%
ATATATGCCTTCAACCTCAA+AGG - Chr2:41598376-41598395 None:intergenic 35.0%
ATGGAAGAAGATTGTTTGAG+AGG - Chr2:41597532-41597551 None:intergenic 35.0%
ATGTAAAGTTCTTGGCAACA+AGG + Chr2:41600834-41600853 MsG0280008922.01.T01:three_prime_UTR 35.0%
ATTGTTCTGCTTGAAATGTC+TGG + Chr2:41599798-41599817 MsG0280008922.01.T01:CDS 35.0%
CAAATTACTGACCTGAAACT+TGG + Chr2:41599139-41599158 MsG0280008922.01.T01:CDS 35.0%
CAAGATCTTCAGAAAAGAGA+AGG + Chr2:41598094-41598113 MsG0280008922.01.T01:CDS 35.0%
CATAATATATGCAAGGTCTG+GGG + Chr2:41600951-41600970 MsG0280008922.01.T01:three_prime_UTR 35.0%
CTTAGTCGAATATCAGTTCT+GGG + Chr2:41600318-41600337 MsG0280008922.01.T01:CDS 35.0%
GAAGAAGAGTAATACCTAAC+GGG - Chr2:41597713-41597732 None:intergenic 35.0%
GACCTAGCTATTAAAAAGCA+TGG - Chr2:41598919-41598938 None:intergenic 35.0%
GTTCTATGCAAACAACTGAA+TGG - Chr2:41600670-41600689 None:intergenic 35.0%
GTTCTATTCCAATTCTTGTC+TGG + Chr2:41600864-41600883 MsG0280008922.01.T01:three_prime_UTR 35.0%
TAGGGTTTCTTGTATTGTCA+AGG + Chr2:41597876-41597895 MsG0280008922.01.T01:five_prime_UTR 35.0%
TATATGCCTTCAACCTCAAA+GGG - Chr2:41598375-41598394 None:intergenic 35.0%
TCAGTTGTTTGCATAGAACT+AGG + Chr2:41600671-41600690 MsG0280008922.01.T01:three_prime_UTR 35.0%
TCTTAGTCGAATATCAGTTC+TGG + Chr2:41600317-41600336 MsG0280008922.01.T01:CDS 35.0%
TGTGCACTAGGAAAACATAT+CGG + Chr2:41598876-41598895 MsG0280008922.01.T01:intron 35.0%
TTTCTTGTATTGTCAAGGCT+TGG + Chr2:41597881-41597900 MsG0280008922.01.T01:five_prime_UTR 35.0%
! AAGGTATCACACCGAATTAT+AGG + Chr2:41598335-41598354 MsG0280008922.01.T01:intron 35.0%
! ACAATCTGTGCATTGATGAA+AGG - Chr2:41598040-41598059 None:intergenic 35.0%
! AGAGGCTTTTCTTGGAAATT+TGG + Chr2:41597932-41597951 MsG0280008922.01.T01:five_prime_UTR 35.0%
! GGAAGTTTCTCAAGCTTTTA+GGG + Chr2:41597858-41597877 MsG0280008922.01.T01:five_prime_UTR 35.0%
! GTTGCAATACATTCTGGAAA+TGG + Chr2:41599923-41599942 MsG0280008922.01.T01:intron 35.0%
! TTCTGAAGATCTTGCAACTT+GGG - Chr2:41598088-41598107 None:intergenic 35.0%
! TTTCTGAAGATCTTGCAACT+TGG - Chr2:41598089-41598108 None:intergenic 35.0%
!! AAAGGTTGGTAAAAGATGAG+AGG - Chr2:41599500-41599519 None:intergenic 35.0%
!! CAGACAGATTTGATTTTACC+TGG - Chr2:41597614-41597633 None:intergenic 35.0%
!! GATTTTGGTGACTTCTTCAA+AGG + Chr2:41597824-41597843 MsG0280008922.01.T01:five_prime_UTR 35.0%
!! TGCTTTCAAGTTCTCTTTCT+TGG + Chr2:41598807-41598826 MsG0280008922.01.T01:intron 35.0%
!!! ACTGTATTTTTTTTGGTGGC+CGG - Chr2:41600985-41601004 None:intergenic 35.0%
!!! AGTTCTGGGTTCAACATTTT+TGG + Chr2:41600332-41600351 MsG0280008922.01.T01:CDS 35.0%
!!! TGTAGATGTTCTATTTTGGC+AGG + Chr2:41599615-41599634 MsG0280008922.01.T01:intron 35.0%
AAAAGCTTGAGAAACTTCCC+TGG - Chr2:41597857-41597876 None:intergenic 40.0%
ACATCATCTGGATCCATTGT+AGG - Chr2:41600092-41600111 None:intergenic 40.0%
AGGCATATATGCAGGTTCAT+AGG + Chr2:41598386-41598405 MsG0280008922.01.T01:intron 40.0%
ATCTGCTTACCTACCGTTTA+AGG + Chr2:41599473-41599492 MsG0280008922.01.T01:CDS 40.0%
ATTTGTTCGCTCACATCATC+TGG - Chr2:41600104-41600123 None:intergenic 40.0%
CAGAAAGAAGGACACAATGA+TGG - Chr2:41599275-41599294 None:intergenic 40.0%
CAGTGCTAGTATGTTTAGGA+AGG + Chr2:41598555-41598574 MsG0280008922.01.T01:intron 40.0%
CATTGTGTCCTTCTTTCTGT+TGG + Chr2:41599276-41599295 MsG0280008922.01.T01:CDS 40.0%
CCAGAATGTATTGCAACAGA+AGG - Chr2:41599920-41599939 None:intergenic 40.0%
CCCAATGTACGTTGTAATCA+CGG - Chr2:41599116-41599135 None:intergenic 40.0%
CCGTGATTACAACGTACATT+GGG + Chr2:41599113-41599132 MsG0280008922.01.T01:CDS 40.0%
CCTTCTGTTGCAATACATTC+TGG + Chr2:41599917-41599936 MsG0280008922.01.T01:intron 40.0%
CGTGATTACAACGTACATTG+GGG + Chr2:41599114-41599133 MsG0280008922.01.T01:CDS 40.0%
CTTCCTAAACATACTAGCAC+TGG - Chr2:41598557-41598576 None:intergenic 40.0%
GAGTGGTAGTAGATATTCTC+CGG - Chr2:41597576-41597595 None:intergenic 40.0%
GCGAACAAATTGAAACGTCA+AGG + Chr2:41600114-41600133 MsG0280008922.01.T01:intron 40.0%
TACACTCGATATGCTTCTGT+TGG + Chr2:41598145-41598164 MsG0280008922.01.T01:CDS 40.0%
TATATGCAGGTTCATAGGTG+TGG + Chr2:41598391-41598410 MsG0280008922.01.T01:intron 40.0%
TCACCAGTGCTAGTATGTTT+AGG + Chr2:41598551-41598570 MsG0280008922.01.T01:intron 40.0%
TCCAACTACCAACAGAAAGA+AGG - Chr2:41599287-41599306 None:intergenic 40.0%
TCCGTGATTACAACGTACAT+TGG + Chr2:41599112-41599131 MsG0280008922.01.T01:CDS 40.0%
TCTAGATTCACCAGCAAAAG+CGG + Chr2:41599438-41599457 MsG0280008922.01.T01:CDS 40.0%
TCTTCAGAAAAGAGAAGGTG+AGG + Chr2:41598099-41598118 MsG0280008922.01.T01:CDS 40.0%
TGAGAGGACGATTATTAAGC+CGG - Chr2:41597516-41597535 None:intergenic 40.0%
TGAGCTTAGCTCAATTGGTA+GGG + Chr2:41600922-41600941 MsG0280008922.01.T01:three_prime_UTR 40.0%
TGTGATGTAGTGTTAAGTGC+TGG - Chr2:41598941-41598960 None:intergenic 40.0%
TTGCAACACTGATGATTCTC+AGG + Chr2:41599383-41599402 MsG0280008922.01.T01:intron 40.0%
TTTGGCAGGTCAATAGTTCT+GGG + Chr2:41599629-41599648 MsG0280008922.01.T01:intron 40.0%
! AGAAGGGGAAGCTTCTTTTA+CGG - Chr2:41597480-41597499 None:intergenic 40.0%
! CATAGAGCACCAAATGCAAA+AGG - Chr2:41599844-41599863 None:intergenic 40.0%
! GGGAAGTTTCTCAAGCTTTT+AGG + Chr2:41597857-41597876 MsG0280008922.01.T01:five_prime_UTR 40.0%
! GTTAACAGAGAGGCTTTTCT+TGG + Chr2:41597924-41597943 MsG0280008922.01.T01:five_prime_UTR 40.0%
! TCTTACTTGCCAGCTTCTTT+TGG + Chr2:41599199-41599218 MsG0280008922.01.T01:CDS 40.0%
! TTTTACCTGGTAGAGAGATG+AGG - Chr2:41597601-41597620 None:intergenic 40.0%
! TTTTGGCAGGTCAATAGTTC+TGG + Chr2:41599628-41599647 MsG0280008922.01.T01:intron 40.0%
!! AATTAGCCCTTTGAGGTTGA+AGG + Chr2:41598366-41598385 MsG0280008922.01.T01:intron 40.0%
!! GGTATGTGGTTGGTTTATCT+CGG + Chr2:41599760-41599779 MsG0280008922.01.T01:CDS 40.0%
!! GTATGTGGTTGGTTTATCTC+GGG + Chr2:41599761-41599780 MsG0280008922.01.T01:CDS 40.0%
!! TCCTTCTTTCTGTTGGTAGT+TGG + Chr2:41599283-41599302 MsG0280008922.01.T01:CDS 40.0%
!!! CTGTATTTTTTTTGGTGGCC+GGG - Chr2:41600984-41601003 None:intergenic 40.0%
!!! TGTATTTTTTTTGGTGGCCG+GGG - Chr2:41600983-41601002 None:intergenic 40.0%
AATGTCCGACCAAAAGAAGC+TGG - Chr2:41599211-41599230 None:intergenic 45.0%
ACCAATACCACCACCAGAAA+AGG - Chr2:41597988-41598007 None:intergenic 45.0%
ACTCGTGAGCTTAGCTCAAT+TGG + Chr2:41600917-41600936 MsG0280008922.01.T01:three_prime_UTR 45.0%
ACTGACCTGAAACTTGGGAA+TGG + Chr2:41599145-41599164 MsG0280008922.01.T01:CDS 45.0%
AGACTTGGCATATGCTCTCT+TGG + Chr2:41598008-41598027 MsG0280008922.01.T01:exon 45.0%
AGGTTCCATTCCCAAGTTTC+AGG - Chr2:41599153-41599172 None:intergenic 45.0%
AGTAAGGAAATCAAGGAGCG+TGG - Chr2:41600218-41600237 None:intergenic 45.0%
AGTCATTTACATAGGGACGC+AGG - Chr2:41599045-41599064 None:intergenic 45.0%
ATGAGAGGACCTTAAACGGT+AGG - Chr2:41599485-41599504 None:intergenic 45.0%
GAAGAAGTGAAGTGAAGTGG+TGG + Chr2:41597432-41597451 MsG0280008922.01.T01:five_prime_UTR 45.0%
GGTAACAAGTCCGACATAGT+TGG - Chr2:41599254-41599273 None:intergenic 45.0%
GGTACTTTAGCACGTTTCAC+TGG + Chr2:41599694-41599713 MsG0280008922.01.T01:CDS 45.0%
GTCGTTCAATTAGCCCTTTG+AGG + Chr2:41598359-41598378 MsG0280008922.01.T01:intron 45.0%
GTGAGCTTAGCTCAATTGGT+AGG + Chr2:41600921-41600940 MsG0280008922.01.T01:three_prime_UTR 45.0%
TAAACCAACCACATACCTCC+TGG - Chr2:41599757-41599776 None:intergenic 45.0%
TAGATGTTCCAGCAAATCCC+CGG - Chr2:41600413-41600432 None:intergenic 45.0%
TCAATTCCACTTGGTCAGAC+CGG + Chr2:41600141-41600160 MsG0280008922.01.T01:intron 45.0%
TCTAGGTGGAGTTAACAGAG+AGG + Chr2:41597914-41597933 MsG0280008922.01.T01:five_prime_UTR 45.0%
TCTCTGTTAACTCCACCTAG+AGG - Chr2:41597915-41597934 None:intergenic 45.0%
TGGGAAGAAGTGAAGTGAAG+TGG + Chr2:41597429-41597448 MsG0280008922.01.T01:five_prime_UTR 45.0%
TGTTGGATTCGCCATTGTAC+AGG + Chr2:41598162-41598181 MsG0280008922.01.T01:CDS 45.0%
TTGGTGTGTATACCTCTAGG+TGG + Chr2:41597900-41597919 MsG0280008922.01.T01:five_prime_UTR 45.0%
! ACATCATCGTTAGCTCTTCC+TGG + Chr2:41599673-41599692 MsG0280008922.01.T01:CDS 45.0%
! ACTCTAGACTCCTTTTCTGG+TGG + Chr2:41597975-41597994 MsG0280008922.01.T01:five_prime_UTR 45.0%
! ACTTGCCAGCTTCTTTTGGT+CGG + Chr2:41599203-41599222 MsG0280008922.01.T01:CDS 45.0%
! AGCACTCTAGACTCCTTTTC+TGG + Chr2:41597972-41597991 MsG0280008922.01.T01:five_prime_UTR 45.0%
! CAAGGTGCTTCAATTCCACT+TGG + Chr2:41600132-41600151 MsG0280008922.01.T01:intron 45.0%
! CTTTGAATCCAGGAGGTATG+TGG + Chr2:41599746-41599765 MsG0280008922.01.T01:CDS 45.0%
! GAGGTTGAAGGCATATATGC+AGG + Chr2:41598378-41598397 MsG0280008922.01.T01:intron 45.0%
! GTAAGGAAATCAAGGAGCGT+GGG - Chr2:41600217-41600236 None:intergenic 45.0%
! GTGAAACGTGCTAAAGTACC+AGG - Chr2:41599694-41599713 None:intergenic 45.0%
! GTTTTCCTAGTGCACAACAG+TGG - Chr2:41598872-41598891 None:intergenic 45.0%
! TAAGGAAATCAAGGAGCGTG+GGG - Chr2:41600216-41600235 None:intergenic 45.0%
! TTGGCAGGTCAATAGTTCTG+GGG + Chr2:41599630-41599649 MsG0280008922.01.T01:intron 45.0%
!! ACATACTAGCACTGGTGAGA+CGG - Chr2:41598549-41598568 None:intergenic 45.0%
!! TTTTTGGCAATCTTGGCTGC+TGG + Chr2:41600348-41600367 MsG0280008922.01.T01:CDS 45.0%
!!! TCCTTTTCTGGTGGTGGTAT+TGG + Chr2:41597984-41598003 MsG0280008922.01.T01:five_prime_UTR 45.0%
AAAGAAGCTTCCCCTTCTCC+CGG + Chr2:41597482-41597501 MsG0280008922.01.T01:five_prime_UTR 50.0%
AGATTCACCAGCAAAAGCGG+TGG + Chr2:41599441-41599460 MsG0280008922.01.T01:CDS 50.0%
AGCTCAGAAAAACCTCGAGG+AGG + Chr2:41597767-41597786 MsG0280008922.01.T01:five_prime_UTR 50.0%
AGGAGTAGCAGCTGCAATAG+AGG + Chr2:41597790-41597809 MsG0280008922.01.T01:five_prime_UTR 50.0%
AGGGACGCAGGAAAAGAACT+TGG - Chr2:41599033-41599052 None:intergenic 50.0%
CAAACAACTGCCACATCACC+CGG - Chr2:41600750-41600769 None:intergenic 50.0%
CAGAAAAGAGAAGGTGAGGC+TGG + Chr2:41598103-41598122 MsG0280008922.01.T01:CDS 50.0%
CTCAACCACTGTTGTGCACT+AGG + Chr2:41598864-41598883 MsG0280008922.01.T01:intron 50.0%
CTCAACCTCATCTCTCTACC+AGG + Chr2:41597593-41597612 MsG0280008922.01.T01:intron 50.0%
CTGCACACTTGACTGCATTC+CGG + Chr2:41600391-41600410 MsG0280008922.01.T01:CDS 50.0%
GAGAGCTCAGAAAAACCTCG+AGG + Chr2:41597764-41597783 MsG0280008922.01.T01:five_prime_UTR 50.0%
GATATAAAAGGGGCAAGCCG+TGG + Chr2:41600717-41600736 MsG0280008922.01.T01:three_prime_UTR 50.0%
GCAGTCTGCTCAACAATTGC+AGG - Chr2:41600375-41600394 None:intergenic 50.0%
GGTAGAGAGATGAGGTTGAG+TGG - Chr2:41597593-41597612 None:intergenic 50.0%
GTAGCGAATTTCGACCCGTT+AGG + Chr2:41597696-41597715 MsG0280008922.01.T01:five_prime_UTR 50.0%
GTGAAGTGAAGTGGTGGTTG+TGG + Chr2:41597438-41597457 MsG0280008922.01.T01:five_prime_UTR 50.0%
TATTAAGCCGGACACACCAC+CGG - Chr2:41597504-41597523 None:intergenic 50.0%
TATTCTCCGGACAGAGAGAG+TGG - Chr2:41597563-41597582 None:intergenic 50.0%
TCAGAAAAACCTCGAGGAGG+AGG + Chr2:41597770-41597789 MsG0280008922.01.T01:five_prime_UTR 50.0%
TCTTCAAAGGTCCTCTGCCA+GGG + Chr2:41597837-41597856 MsG0280008922.01.T01:five_prime_UTR 50.0%
TGCACACTTGACTGCATTCC+GGG + Chr2:41600392-41600411 MsG0280008922.01.T01:CDS 50.0%
TTCTTCAAAGGTCCTCTGCC+AGG + Chr2:41597836-41597855 MsG0280008922.01.T01:five_prime_UTR 50.0%
TTGAGAAACTTCCCTGGCAG+AGG - Chr2:41597851-41597870 None:intergenic 50.0%
! AGAGAGAGTGGCTCTGCAAA+TGG - Chr2:41597551-41597570 None:intergenic 50.0%
! GAATCCAGGAGGTATGTGGT+TGG + Chr2:41599750-41599769 MsG0280008922.01.T01:CDS 50.0%
!! CTAGACTCCTTTTCTGGTGG+TGG + Chr2:41597978-41597997 MsG0280008922.01.T01:five_prime_UTR 50.0%
!! GCAGTAGCTTTGAATCCAGG+AGG + Chr2:41599739-41599758 MsG0280008922.01.T01:CDS 50.0%
!! GCTGCAGTAGCTTTGAATCC+AGG + Chr2:41599736-41599755 MsG0280008922.01.T01:CDS 50.0%
!! GGCTTGGTGTGTATACCTCT+AGG + Chr2:41597897-41597916 MsG0280008922.01.T01:five_prime_UTR 50.0%
!! GGTGGTGGTATTGGTAGACT+TGG + Chr2:41597993-41598012 MsG0280008922.01.T01:five_prime_UTR 50.0%
!! TTCAAGTCCACCGCTTTTGC+TGG - Chr2:41599451-41599470 None:intergenic 50.0%
ACTGCATTCCGGGGATTTGC+TGG + Chr2:41600402-41600421 MsG0280008922.01.T01:CDS 55.0%
ATTAAGCCGGACACACCACC+GGG - Chr2:41597503-41597522 None:intergenic 55.0%
GCACACTTGACTGCATTCCG+GGG + Chr2:41600393-41600412 MsG0280008922.01.T01:CDS 55.0%
! AAGGTCTGGGGTTCAAACCC+CGG + Chr2:41600963-41600982 MsG0280008922.01.T01:three_prime_UTR 55.0%
ACTCTGCCGGTCTGACCAAG+TGG - Chr2:41600150-41600169 None:intergenic 60.0%
GCAGAGCCACTCTCTCTGTC+CGG + Chr2:41597554-41597573 MsG0280008922.01.T01:intron 60.0%
GCGTGGGGCTAGAGAAGAGA+AGG - Chr2:41600201-41600220 None:intergenic 60.0%
CCTTCTCCCGGTGGTGTGTC+CGG + Chr2:41597494-41597513 MsG0280008922.01.T01:five_prime_UTR 65.0%
CGGACACACCACCGGGAGAA+GGG - Chr2:41597496-41597515 None:intergenic 65.0%
GAAGCTTCCCCTTCTCCCGG+TGG + Chr2:41597485-41597504 MsG0280008922.01.T01:five_prime_UTR 65.0%
GCTGCTACTCCTCCTCCTCG+AGG - Chr2:41597782-41597801 None:intergenic 65.0%
GGACACACCACCGGGAGAAG+GGG - Chr2:41597495-41597514 None:intergenic 65.0%
AAGGGGCAAGCCGTGGCTCG+TGG + Chr2:41600724-41600743 MsG0280008922.01.T01:three_prime_UTR 70.0%
CATCACCCGGCCACGAGCCA+CGG - Chr2:41600737-41600756 None:intergenic 70.0%
CCGGACACACCACCGGGAGA+AGG - Chr2:41597497-41597516 None:intergenic 70.0%
TGGCTCGTGGCCGGGTGATG+TGG + Chr2:41600737-41600756 MsG0280008922.01.T01:three_prime_UTR 70.0%
GCAAGCCGTGGCTCGTGGCC+GGG + Chr2:41600729-41600748 MsG0280008922.01.T01:three_prime_UTR 75.0%
GGCAAGCCGTGGCTCGTGGC+CGG + Chr2:41600728-41600747 MsG0280008922.01.T01:three_prime_UTR 75.0%
Chromosome Type Strat End Strand Name
Chr2 gene 41597428 41601097 41597428 ID=MsG0280008922.01;Name=MsG0280008922.01
Chr2 mRNA 41597428 41601097 41597428 ID=MsG0280008922.01.T01;Parent=MsG0280008922.01;Name=MsG0280008922.01.T01;_AED=0.22;_eAED=0.22;_QI=547|0.8|0.83|1|0.6|0.5|6|558|320
Chr2 exon 41600315 41601097 41600315 ID=MsG0280008922.01.T01:exon:29786;Parent=MsG0280008922.01.T01
Chr2 exon 41599637 41599819 41599637 ID=MsG0280008922.01.T01:exon:29785;Parent=MsG0280008922.01.T01
Chr2 exon 41599405 41599494 41599405 ID=MsG0280008922.01.T01:exon:29784;Parent=MsG0280008922.01.T01
Chr2 exon 41599022 41599321 41599022 ID=MsG0280008922.01.T01:exon:29783;Parent=MsG0280008922.01.T01
Chr2 exon 41597598 41598183 41597598 ID=MsG0280008922.01.T01:exon:29782;Parent=MsG0280008922.01.T01
Chr2 exon 41597428 41597553 41597428 ID=MsG0280008922.01.T01:exon:29781;Parent=MsG0280008922.01.T01
Chr2 five_prime_UTR 41597428 41597553 41597428 ID=MsG0280008922.01.T01:five_prime_utr;Parent=MsG0280008922.01.T01
Chr2 five_prime_UTR 41597598 41598018 41597598 ID=MsG0280008922.01.T01:five_prime_utr;Parent=MsG0280008922.01.T01
Chr2 CDS 41598019 41598183 41598019 ID=MsG0280008922.01.T01:cds;Parent=MsG0280008922.01.T01
Chr2 CDS 41599022 41599321 41599022 ID=MsG0280008922.01.T01:cds;Parent=MsG0280008922.01.T01
Chr2 CDS 41599405 41599494 41599405 ID=MsG0280008922.01.T01:cds;Parent=MsG0280008922.01.T01
Chr2 CDS 41599637 41599819 41599637 ID=MsG0280008922.01.T01:cds;Parent=MsG0280008922.01.T01
Chr2 CDS 41600315 41600539 41600315 ID=MsG0280008922.01.T01:cds;Parent=MsG0280008922.01.T01
Chr2 three_prime_UTR 41600540 41601097 41600540 ID=MsG0280008922.01.T01:three_prime_utr;Parent=MsG0280008922.01.T01
Gene Sequence

>MsG0280008922.01.T01

ATGCTCTCTTGGTATGTTCCTTTCATCAATGCACAGATTGTTTTTCAGCTTCTTGCTCAAGTATATCCCAAGTTGCAAGATCTTCAGAAAAGAGAAGGTGAGGCTGGAAGAAAGAAAATTCTTCAGTACACTCGATATGCTTCTGTTGGATTCGCCATTGTACAGGCTATTGGCCAAGTTCTTTTCCTGCGTCCCTATGTAAATGACTTTACAACAGAGTGGGCTCTTACTTCTGTTATCTTATTGACACTTGGCTCCGTGATTACAACGTACATTGGGGAGCAAATTACTGACCTGAAACTTGGGAATGGAACCTCTCTTTTGATATTCACAAACATTATCTCTTACTTGCCAGCTTCTTTTGGTCGGACATTTGCACAAGCATTTAATGATGCCAACTATGTCGGACTTGTTACCATCATTGTGTCCTTCTTTCTGTTGGTAGTTGGAATTGTCTATGTTCAGGAAGCAGAGAGAAAAATTCCTATTAACTACGCGTCTAGATTCACCAGCAAAAGCGGTGGACTTGAAAAATCTGCTTACCTACCGTTTAAGGTCAATAGTTCTGGGGTAATGCCTATCATATTTTCTACATCATCGTTAGCTCTTCCTGGTACTTTAGCACGTTTCACTGGTTTAAGTGCACTAAAAAATGCTGCAGTAGCTTTGAATCCAGGAGGTATGTGGTTGGTTTATCTCGGGTTTATAATAATAAAATTGTTCTGCTTGAAATGTCTGGTTCTTAGTCGAATATCAGTTCTGGGTTCAACATTTTTGGCAATCTTGGCTGCTGGACCTGCAATTGTTGAGCAGACTGCACACTTGACTGCATTCCGGGGATTTGCTGGAACATCTATTCTTATTCTTGTTGGTTGTGCAACAGACACTGCTAGAAAAGTTCGAGCTGAGATTATATCCCAGAAGTACAAAAACATAGAGTTATATGACTTTGACAAGTATTGA

Protein sequence

>MsG0280008922.01.T01

MLSWYVPFINAQIVFQLLAQVYPKLQDLQKREGEAGRKKILQYTRYASVGFAIVQAIGQVLFLRPYVNDFTTEWALTSVILLTLGSVITTYIGEQITDLKLGNGTSLLIFTNIISYLPASFGRTFAQAFNDANYVGLVTIIVSFFLLVVGIVYVQEAERKIPINYASRFTSKSGGLEKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGLSALKNAAVALNPGGMWLVYLGFIIIKLFCLKCLVLSRISVLGSTFLAILAAGPAIVEQTAHLTAFRGFAGTSILILVGCATDTARKVRAEIISQKYKNIELYDFDKY*