AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580029764.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580029764.01.T01 MTR_5g092150 95.781 474 20 0 1 474 1 474 0.0 910
MsG0580029764.01.T01 MTR_3g467130 40.402 448 263 4 27 471 31 477 1.61e-119 358
MsG0580029764.01.T01 MTR_3g467140 39.331 478 282 6 1 471 1 477 2.07e-116 350
MsG0580029764.01.T01 MTR_8g100135 37.844 473 291 3 2 472 7 478 2.08e-116 350
MsG0580029764.01.T01 MTR_5g091760 35.220 477 295 7 4 473 10 479 5.17e-104 318
MsG0580029764.01.T01 MTR_8g100135 35.467 375 241 1 2 375 7 381 1.26e-81 258
MsG0580029764.01.T01 MTR_3g467140 39.130 345 206 4 130 471 1 344 6.94e-80 252
MsG0580029764.01.T01 MTR_8g089190 32.166 457 277 11 29 468 1 441 2.46e-78 251
MsG0580029764.01.T01 MTR_5g020020 32.889 450 293 6 7 451 14 459 4.63e-71 233
MsG0580029764.01.T01 MTR_6g034940 30.921 456 295 9 7 451 14 460 1.74e-70 232
MsG0580029764.01.T01 MTR_8g072260 31.158 475 305 9 2 472 10 466 1.47e-69 229
MsG0580029764.01.T01 MTR_1g019410 30.851 470 306 7 2 464 5 462 1.85e-68 226
MsG0580029764.01.T01 MTR_5g025610 32.150 479 295 12 1 472 9 464 4.13e-68 225
MsG0580029764.01.T01 MTR_8g072260 31.250 464 293 9 2 457 10 455 2.84e-67 223
MsG0580029764.01.T01 MTR_4g086130 30.296 439 293 5 28 464 34 461 7.98e-66 219
MsG0580029764.01.T01 MTR_5g025610 32.366 448 274 11 1 442 9 433 5.54e-65 216
MsG0580029764.01.T01 MTR_5g082520 29.762 420 282 7 28 443 27 437 1.21e-64 216
MsG0580029764.01.T01 MTR_8g077810 30.482 456 304 6 2 448 6 457 2.93e-64 216
MsG0580029764.01.T01 MTR_8g016180 29.508 427 285 7 22 442 28 444 1.44e-63 213
MsG0580029764.01.T01 MTR_3g070380 30.641 421 279 7 28 443 28 440 8.87e-63 212
MsG0580029764.01.T01 MTR_7g033040 27.865 445 312 5 28 470 32 469 1.78e-60 205
MsG0580029764.01.T01 MTR_4g086040 31.027 448 291 7 22 464 31 465 2.49e-60 205
MsG0580029764.01.T01 MTR_3g051230 56.725 171 57 4 6 172 3 160 9.62e-59 191
MsG0580029764.01.T01 MTR_2g031920 28.261 460 316 10 2 451 11 466 1.04e-58 201
MsG0580029764.01.T01 MTR_5g021220 26.535 456 311 8 8 442 9 461 2.09e-56 195
MsG0580029764.01.T01 MTR_5g010750 25.664 452 329 4 7 456 9 455 3.16e-56 194
MsG0580029764.01.T01 MTR_8g076510 26.442 416 298 4 30 442 40 450 5.95e-56 193
MsG0580029764.01.T01 MTR_5g010750 26.027 438 317 4 7 442 9 441 7.93e-56 192
MsG0580029764.01.T01 MTR_7g016040 28.315 445 301 8 27 468 31 460 9.26e-55 190
MsG0580029764.01.T01 MTR_5g014250 25.383 457 332 8 18 468 34 487 6.10e-54 188
MsG0580029764.01.T01 MTR_3g007320 26.923 468 322 8 2 464 5 457 1.49e-53 187
MsG0580029764.01.T01 MTR_8g089800 26.398 447 319 8 29 468 43 486 2.49e-53 187
MsG0580029764.01.T01 MTR_1g037580 28.785 469 315 10 5 468 19 473 9.13e-53 185
MsG0580029764.01.T01 MTR_8g072260 30.147 408 266 7 2 406 10 401 2.51e-52 183
MsG0580029764.01.T01 MTR_6g015910 26.709 468 323 8 2 464 5 457 3.85e-52 183
MsG0580029764.01.T01 MTR_3g112120 28.942 463 313 7 6 459 16 471 5.46e-52 183
MsG0580029764.01.T01 MTR_0045s0060 26.577 444 308 11 13 451 26 456 5.64e-52 182
MsG0580029764.01.T01 MTR_2g031930 26.056 426 303 7 29 448 45 464 1.08e-51 182
MsG0580029764.01.T01 MTR_2g031930 26.253 419 299 8 29 442 41 454 2.06e-51 181
MsG0580029764.01.T01 MTR_5g014240 26.535 456 327 7 18 468 34 486 1.05e-50 179
MsG0580029764.01.T01 MTR_8g089190 29.477 363 224 10 29 375 1 347 2.62e-50 175
MsG0580029764.01.T01 MTR_5g025610 30.713 407 255 10 1 401 9 394 6.74e-50 176
MsG0580029764.01.T01 MTR_8g016180 27.720 386 264 6 22 401 28 404 1.79e-48 172
MsG0580029764.01.T01 MTR_0045s0070 25.702 463 323 13 13 468 26 474 2.09e-48 173
MsG0580029764.01.T01 MTR_8g076940 26.786 448 313 7 6 446 19 458 5.13e-48 172
MsG0580029764.01.T01 MTR_6g069000 24.667 450 321 5 1 442 12 451 1.96e-47 170
MsG0580029764.01.T01 MTR_6g069000 24.667 450 321 5 1 442 22 461 3.17e-47 169
MsG0580029764.01.T01 MTR_0045s0070 26.389 432 298 12 13 438 26 443 3.71e-47 169
MsG0580029764.01.T01 MTR_8g012970 26.905 420 293 10 29 442 45 456 1.11e-46 169
MsG0580029764.01.T01 MTR_5g020020 30.904 343 214 8 128 451 47 385 7.97e-46 164
MsG0580029764.01.T01 MTR_0045s0060 26.632 383 269 8 70 451 3 374 6.12e-45 162
MsG0580029764.01.T01 MTR_4g005230 25.298 419 301 8 29 442 43 454 1.38e-42 157
MsG0580029764.01.T01 MTR_0045s0080 26.650 394 265 12 13 400 26 401 2.81e-38 144
MsG0580029764.01.T01 MTR_8g076940 25.542 415 296 6 6 413 19 427 4.12e-38 144
MsG0580029764.01.T01 MTR_1g032950 24.396 455 311 9 2 442 9 444 2.34e-37 143
MsG0580029764.01.T01 MTR_7g016040 26.979 341 235 6 27 366 31 358 4.50e-34 132
MsG0580029764.01.T01 MTR_6g022450 25.625 480 313 16 7 449 11 483 3.75e-28 117
MsG0580029764.01.T01 MTR_5g007550 25.657 495 322 15 4 469 11 488 1.75e-26 112
MsG0580029764.01.T01 MTR_8g076940 24.084 382 277 6 6 380 19 394 2.57e-26 110
MsG0580029764.01.T01 MTR_8g076940 25.000 348 248 6 6 346 19 360 3.37e-26 110
MsG0580029764.01.T01 MTR_5g007450 25.455 495 323 15 4 469 11 488 1.74e-25 109
MsG0580029764.01.T01 MTR_1g031700 23.504 468 321 11 5 446 9 465 4.23e-25 108
MsG0580029764.01.T01 MTR_8g042020 25.547 411 269 11 62 446 97 496 5.04e-25 108
MsG0580029764.01.T01 MTR_3g076560 23.313 489 332 12 7 466 29 503 9.46e-24 104
MsG0580029764.01.T01 MTR_1g103670 23.918 485 298 16 5 446 9 465 1.82e-23 103
MsG0580029764.01.T01 MTR_2g072400 25.121 414 269 14 62 446 88 489 2.64e-23 103
MsG0580029764.01.T01 MTR_5g007460 24.138 493 302 14 22 469 2 467 3.29e-23 102
MsG0580029764.01.T01 MTR_5g021390 24.000 475 316 13 6 446 18 481 1.06e-22 101
MsG0580029764.01.T01 MTR_0147s0030 24.490 441 291 15 55 468 103 528 4.26e-22 99.8
MsG0580029764.01.T01 MTR_7g006900 26.615 387 257 15 102 470 94 471 8.87e-22 98.2
MsG0580029764.01.T01 MTR_3g104560 27.974 311 187 10 149 449 92 375 9.74e-22 97.4
MsG0580029764.01.T01 MTR_3g104560 27.974 311 187 10 149 449 227 510 1.55e-21 97.8
MsG0580029764.01.T01 MTR_1g032980 23.684 342 254 6 20 356 7 346 1.67e-21 96.7
MsG0580029764.01.T01 MTR_5g016440 24.516 465 300 13 10 445 15 457 1.70e-21 97.4
MsG0580029764.01.T01 MTR_1g103680 23.313 489 307 15 4 449 6 469 1.82e-21 97.4
MsG0580029764.01.T01 MTR_6g008530 24.016 508 294 21 1 442 8 489 2.13e-21 97.4
MsG0580029764.01.T01 MTR_7g079440 27.734 256 163 7 205 446 373 620 2.82e-21 97.4
MsG0580029764.01.T01 MTR_2g010250 24.324 481 312 16 5 446 9 476 7.56e-21 95.5
MsG0580029764.01.T01 MTR_8g046210 23.881 469 321 13 5 446 15 474 1.10e-20 95.1
MsG0580029764.01.T01 MTR_2g072380 26.837 313 193 13 159 446 23 324 1.18e-20 93.6
MsG0580029764.01.T01 MTR_8g469360 27.424 361 229 12 127 467 65 412 2.63e-20 93.2
MsG0580029764.01.T01 MTR_2g072380 26.837 313 193 13 159 446 163 464 2.77e-20 94.0
MsG0580029764.01.T01 MTR_2g055430 24.812 399 265 13 74 446 102 491 3.30e-20 93.6
MsG0580029764.01.T01 MTR_6g017325 26.992 389 255 16 101 470 128 506 5.25e-20 93.2
MsG0580029764.01.T01 MTR_8g046240 31.197 234 151 5 219 446 245 474 6.02e-20 92.8
MsG0580029764.01.T01 MTR_8g042060 25.243 412 278 10 58 446 93 497 8.89e-20 92.4
MsG0580029764.01.T01 MTR_4g089030 22.574 505 337 17 5 472 20 507 9.37e-20 92.4
MsG0580029764.01.T01 MTR_2g055470 26.359 368 232 12 108 446 134 491 1.03e-19 92.4
MsG0580029764.01.T01 MTR_8g006450 22.500 440 312 12 24 448 33 458 1.14e-19 92.0
MsG0580029764.01.T01 MTR_8g008530 26.902 368 224 14 127 467 158 507 2.08e-19 91.3
MsG0580029764.01.T01 MTR_6g042610 24.481 482 310 21 2 438 8 480 2.30e-19 91.3
MsG0580029764.01.T01 MTR_4g078110 24.434 442 286 13 28 445 27 444 2.45e-19 90.9
MsG0580029764.01.T01 MTR_4g071710 23.299 485 317 13 3 446 11 481 3.76e-19 90.5
MsG0580029764.01.T01 MTR_8g012590 29.688 256 160 7 208 449 223 472 4.60e-19 90.1
MsG0580029764.01.T01 MTR_8g042000 25.416 421 266 12 58 446 93 497 5.60e-19 90.1
MsG0580029764.01.T01 MTR_2g010330 23.349 424 272 13 64 446 67 478 6.07e-19 89.7
MsG0580029764.01.T01 MTR_8g076290 23.832 428 283 13 30 425 36 452 7.73e-19 89.4
MsG0580029764.01.T01 MTR_4g102310 22.616 451 308 13 22 443 32 470 8.09e-19 89.4
MsG0580029764.01.T01 MTR_4g095050 22.965 479 316 16 6 449 8 468 8.36e-19 89.4
MsG0580029764.01.T01 MTR_4g104540 27.027 296 193 9 169 446 109 399 1.38e-18 88.2
MsG0580029764.01.T01 MTR_5g018980 23.673 452 302 16 28 446 33 474 1.72e-18 88.6
MsG0580029764.01.T01 MTR_2g072340 25.879 313 196 12 159 446 188 489 1.79e-18 88.6
MsG0580029764.01.T01 MTR_5g016410 24.628 471 317 17 4 449 7 464 2.10e-18 88.2
MsG0580029764.01.T01 MTR_2g010290 22.436 468 324 13 5 446 49 503 2.36e-18 88.2
MsG0580029764.01.T01 MTR_6g008430 24.536 485 305 20 4 442 9 478 2.68e-18 87.8
MsG0580029764.01.T01 MTR_2g072250 24.839 310 203 8 159 446 186 487 2.78e-18 87.8
MsG0580029764.01.T01 MTR_8g063280 21.162 482 328 14 1 445 1 467 3.01e-18 87.8
MsG0580029764.01.T01 MTR_2g073480 31.034 203 131 4 249 446 183 381 5.09e-18 86.3
MsG0580029764.01.T01 MTR_7g012330 24.837 459 289 18 16 434 15 457 5.62e-18 86.7
MsG0580029764.01.T01 MTR_2g072270 24.451 319 216 11 147 446 184 496 5.73e-18 87.0
MsG0580029764.01.T01 MTR_2g072310 25.633 316 193 12 159 446 23 324 5.74e-18 85.5
MsG0580029764.01.T01 MTR_2g073440 31.034 203 131 4 249 446 250 448 5.85e-18 86.7
MsG0580029764.01.T01 MTR_7g055793 24.054 370 246 12 124 468 107 466 6.12e-18 86.7
MsG0580029764.01.T01 MTR_2g023680 23.871 310 206 8 159 446 190 491 6.21e-18 86.7
MsG0580029764.01.T01 MTR_7g055793 24.054 370 246 12 124 468 162 521 7.19e-18 86.7
MsG0580029764.01.T01 MTR_6g042540 22.176 478 299 17 4 427 9 467 7.73e-18 86.7
MsG0580029764.01.T01 MTR_0181s0030 23.673 490 324 15 5 459 9 483 8.91e-18 86.3
MsG0580029764.01.T01 MTR_2g065360 22.940 449 310 13 27 449 5 443 9.10e-18 85.9
MsG0580029764.01.T01 MTR_7g103450 22.360 483 296 17 16 446 30 485 1.05e-17 85.9
MsG0580029764.01.T01 MTR_5g095290 23.899 477 316 15 4 448 9 470 1.53e-17 85.5
MsG0580029764.01.T01 MTR_2g072260 24.920 313 203 11 159 448 183 486 1.75e-17 85.5
MsG0580029764.01.T01 MTR_8g042060 25.287 348 218 10 136 446 119 461 1.90e-17 85.1
MsG0580029764.01.T01 MTR_2g010320 28.571 217 142 5 241 446 260 474 3.53e-17 84.3
MsG0580029764.01.T01 MTR_6g008600 23.553 501 290 22 8 442 14 487 3.57e-17 84.3
MsG0580029764.01.T01 MTR_4g025970 25.149 505 327 18 2 469 1 491 3.71e-17 84.3
MsG0580029764.01.T01 MTR_5g045770 25.794 504 324 18 2 469 1 490 3.74e-17 84.3
MsG0580029764.01.T01 MTR_2g010380 24.390 451 292 13 35 446 40 480 4.18e-17 84.3
MsG0580029764.01.T01 MTR_3g093530 25.667 300 205 6 160 446 203 497 4.39e-17 84.3
MsG0580029764.01.T01 MTR_1g091023 23.125 480 279 16 18 446 23 463 4.80e-17 84.0
MsG0580029764.01.T01 MTR_4g077210 29.508 244 156 9 241 473 263 501 4.90e-17 84.0
MsG0580029764.01.T01 MTR_2g019640 23.963 434 279 15 27 427 38 453 1.11e-16 82.8
MsG0580029764.01.T01 MTR_1g055325 30.000 210 133 5 242 446 286 486 1.14e-16 82.8
MsG0580029764.01.T01 MTR_5g095230 23.823 361 236 14 115 446 137 487 1.22e-16 82.8
MsG0580029764.01.T01 MTR_4g102280 29.386 228 145 7 226 443 255 476 2.07e-16 82.0
MsG0580029764.01.T01 MTR_5g072980 22.814 469 320 13 29 467 33 489 2.28e-16 82.0
MsG0580029764.01.T01 MTR_5g072930 22.814 469 320 13 29 467 33 489 2.28e-16 82.0
MsG0580029764.01.T01 MTR_1g091003 26.724 232 156 5 225 449 242 466 3.32e-16 81.3
MsG0580029764.01.T01 MTR_4g089020 22.009 468 323 14 6 446 9 461 3.32e-16 81.3
MsG0580029764.01.T01 MTR_4g113650 24.804 383 253 13 90 446 119 492 3.57e-16 81.3
MsG0580029764.01.T01 MTR_2g010300 22.316 475 313 12 5 446 9 460 3.65e-16 81.3
MsG0580029764.01.T01 MTR_0608s0010 23.158 380 262 10 5 370 9 372 3.89e-16 80.1
MsG0580029764.01.T01 MTR_3g076530 24.843 479 305 22 1 446 15 471 4.96e-16 80.9
MsG0580029764.01.T01 MTR_1g037370 23.144 458 309 16 18 448 23 464 5.04e-16 80.9
MsG0580029764.01.T01 MTR_8g466180 23.226 465 297 17 21 446 26 469 5.49e-16 80.9
MsG0580029764.01.T01 MTR_1g015860 28.736 174 102 5 281 442 332 495 6.36e-16 80.5
MsG0580029764.01.T01 MTR_0638s0020 22.955 440 272 14 27 446 5 397 7.53e-16 79.7
MsG0580029764.01.T01 MTR_6g034965 21.814 463 331 14 7 446 13 467 8.72e-16 80.1
MsG0580029764.01.T01 MTR_5g009110 25.080 311 180 10 177 446 96 394 1.21e-15 79.3
MsG0580029764.01.T01 MTR_1g091010 28.780 205 132 5 249 446 265 462 1.23e-15 79.7
MsG0580029764.01.T01 MTR_6g008650 23.260 503 295 21 3 442 11 485 1.30e-15 79.7
MsG0580029764.01.T01 MTR_6g072490 23.647 351 241 11 115 446 144 486 1.33e-15 79.7
MsG0580029764.01.T01 MTR_1g101040 24.571 350 239 12 115 446 146 488 1.61e-15 79.3
MsG0580029764.01.T01 MTR_7g075610 23.629 474 326 12 1 446 6 471 1.77e-15 79.0
MsG0580029764.01.T01 MTR_5g009110 25.080 311 180 10 177 446 244 542 2.05e-15 79.0
MsG0580029764.01.T01 MTR_4g025980 23.732 493 319 18 16 469 16 490 2.71e-15 78.6
MsG0580029764.01.T01 MTR_1g085680 24.009 429 293 13 71 473 97 518 3.21e-15 78.2
MsG0580029764.01.T01 MTR_3g058400 23.256 473 322 15 4 448 13 472 3.46e-15 78.2
MsG0580029764.01.T01 MTR_1g062190 25.194 258 176 7 227 471 286 539 4.01e-15 78.2
MsG0580029764.01.T01 MTR_1g023730 23.158 475 303 20 18 446 21 479 4.05e-15 78.2
MsG0580029764.01.T01 MTR_3g057980 24.948 477 306 21 2 446 8 464 4.13e-15 77.8
MsG0580029764.01.T01 MTR_8g036185 26.772 254 164 4 227 461 251 501 4.26e-15 78.2
MsG0580029764.01.T01 MTR_3g014880 25.328 229 151 8 214 427 252 475 5.41e-15 77.8
MsG0580029764.01.T01 MTR_4g029690 19.108 314 238 6 1 303 8 316 6.74e-15 75.9
MsG0580029764.01.T01 MTR_2g073420 28.182 220 149 4 243 457 272 487 8.54e-15 77.0
MsG0580029764.01.T01 MTR_8g042040 24.444 405 273 12 58 446 93 480 1.12e-14 76.6
MsG0580029764.01.T01 MTR_4g104570 30.994 171 111 3 280 446 1 168 1.12e-14 73.2
MsG0580029764.01.T01 MTR_2g450040 23.859 482 305 19 7 442 15 480 1.40e-14 76.3
MsG0580029764.01.T01 MTR_7g096340 22.030 463 305 16 23 444 24 471 1.76e-14 75.9
MsG0580029764.01.T01 MTR_4g094775 22.601 469 326 15 4 449 10 464 2.70e-14 75.5
MsG0580029764.01.T01 MTR_4g133750 23.318 446 305 15 28 446 36 471 2.91e-14 75.5
MsG0580029764.01.T01 MTR_8g006495 24.107 336 216 11 130 448 32 345 2.95e-14 74.7
MsG0580029764.01.T01 MTR_4g048580 21.748 469 327 17 6 446 12 468 4.45e-14 74.7
MsG0580029764.01.T01 MTR_7g012860 24.494 445 284 18 26 434 30 458 7.69e-14 73.9
MsG0580029764.01.T01 MTR_0287s0060 24.494 445 284 18 26 434 30 458 7.69e-14 73.9
MsG0580029764.01.T01 MTR_2g061200 23.684 380 255 12 99 446 126 502 7.78e-14 73.9
MsG0580029764.01.T01 MTR_5g023680 24.306 432 277 16 30 427 6 421 1.13e-13 73.6
MsG0580029764.01.T01 MTR_3g080580 22.599 354 224 13 138 448 146 492 1.32e-13 73.2
MsG0580029764.01.T01 MTR_6g008640 23.297 279 182 10 173 423 194 468 2.90e-13 72.4
MsG0580029764.01.T01 MTR_6g084770 22.811 491 321 22 5 457 12 482 3.20e-13 72.0
MsG0580029764.01.T01 MTR_3g058110 22.366 465 301 16 21 446 30 473 3.25e-13 72.0
MsG0580029764.01.T01 MTR_7g079440 26.341 205 134 6 205 400 373 569 3.62e-13 72.0
MsG0580029764.01.T01 MTR_2g105360 34.416 154 95 3 324 471 345 498 4.34e-13 71.6
MsG0580029764.01.T01 MTR_7g096320 21.382 463 307 17 24 444 25 472 4.90e-13 71.6
MsG0580029764.01.T01 MTR_5g094560 20.975 472 329 20 5 446 11 468 1.24e-12 70.1
MsG0580029764.01.T01 MTR_5g073020 22.042 431 292 14 29 427 33 451 1.93e-12 69.7
MsG0580029764.01.T01 MTR_8g098565 27.320 194 128 4 265 447 286 477 2.12e-12 69.3
MsG0580029764.01.T01 MTR_1g035830 22.785 395 241 12 90 447 114 481 2.16e-12 69.3
MsG0580029764.01.T01 MTR_8g468780 27.074 229 151 6 211 427 163 387 2.54e-12 68.9
MsG0580029764.01.T01 MTR_6g035115 21.674 466 310 12 19 451 27 470 4.45e-12 68.6
MsG0580029764.01.T01 MTR_4g088160 22.922 397 266 15 64 427 66 455 4.91e-12 68.6
MsG0580029764.01.T01 MTR_4g088170 22.912 467 299 17 8 427 5 457 5.19e-12 68.2
MsG0580029764.01.T01 MTR_5g094540 20.771 467 336 14 5 446 11 468 6.84e-12 67.8
MsG0580029764.01.T01 MTR_4g088420 27.097 155 102 4 280 427 31 181 6.92e-12 65.9
MsG0580029764.01.T01 MTR_4g026050 22.222 477 327 16 1 446 1 464 1.29e-11 67.0
MsG0580029764.01.T01 MTR_2g010280 27.604 192 127 5 265 446 285 474 1.45e-11 67.0
MsG0580029764.01.T01 MTR_1g035190 23.060 464 296 18 21 446 14 454 1.59e-11 66.6
MsG0580029764.01.T01 MTR_4g035330 24.686 239 165 6 233 467 240 467 2.65e-11 65.9
MsG0580029764.01.T01 MTR_1g023700 21.987 473 307 16 20 446 24 480 2.68e-11 66.2
MsG0580029764.01.T01 MTR_8g104030 26.695 236 156 7 227 449 20 251 3.02e-11 64.7
MsG0580029764.01.T01 MTR_3g058060 22.561 492 305 22 4 446 8 472 3.08e-11 65.9
MsG0580029764.01.T01 MTR_5g073320 21.719 442 312 16 29 446 38 469 3.10e-11 65.9
MsG0580029764.01.T01 MTR_3g058220 22.538 457 309 16 20 446 28 469 3.20e-11 65.9
MsG0580029764.01.T01 MTR_8g098435 24.430 307 185 10 159 430 168 462 3.35e-11 65.9
MsG0580029764.01.T01 MTR_3g058380 25.589 297 190 12 175 448 103 391 4.70e-11 65.1
MsG0580029764.01.T01 MTR_1g035940 22.785 395 241 13 90 447 114 481 5.65e-11 65.1
MsG0580029764.01.T01 MTR_5g056720 24.569 232 153 6 225 450 186 401 9.76e-11 63.9
MsG0580029764.01.T01 MTR_8g091680 23.684 456 300 18 2 446 1 419 9.91e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580029764.01.T01 AT5G36110 37.556 450 267 6 29 471 34 476 4.64e-106 324
MsG0580029764.01.T01 AT2G42850 34.989 443 280 5 31 471 47 483 5.00e-95 296
MsG0580029764.01.T01 AT5G45340 30.851 470 303 9 1 468 10 459 1.25e-71 234
MsG0580029764.01.T01 AT5G45340 31.567 453 288 9 1 451 10 442 4.37e-71 233
MsG0580029764.01.T01 AT5G36110 35.795 352 215 4 29 375 34 379 5.13e-71 230
MsG0580029764.01.T01 AT4G19230 31.674 442 284 8 29 469 36 460 2.51e-70 231
MsG0580029764.01.T01 AT4G19230 32.126 414 264 7 29 442 36 432 7.37e-68 225
MsG0580029764.01.T01 AT2G32440 29.099 433 299 6 17 445 32 460 9.79e-67 222
MsG0580029764.01.T01 AT2G32440 29.099 433 299 6 17 445 32 460 9.79e-67 222
MsG0580029764.01.T01 AT3G13730 30.569 422 278 8 28 442 50 463 4.63e-65 217
MsG0580029764.01.T01 AT3G13730 30.569 422 278 8 28 442 50 463 1.06e-64 217
MsG0580029764.01.T01 AT2G42850 33.237 346 226 3 31 375 47 388 7.47e-64 212
MsG0580029764.01.T01 AT4G36380 29.138 429 298 4 29 453 69 495 7.62e-64 216
MsG0580029764.01.T01 AT5G05690 31.579 418 275 7 29 443 31 440 9.04e-64 214
MsG0580029764.01.T01 AT2G29090 29.464 448 297 8 28 470 48 481 3.48e-63 213
MsG0580029764.01.T01 AT2G29090 29.464 448 297 8 28 470 48 481 3.48e-63 213
MsG0580029764.01.T01 AT1G05160 28.266 421 296 5 29 445 45 463 6.43e-63 212
MsG0580029764.01.T01 AT1G05160 28.266 421 296 5 29 445 45 463 6.43e-63 212
MsG0580029764.01.T01 AT3G19270 27.332 461 321 7 6 464 11 459 9.88e-60 203
MsG0580029764.01.T01 AT3G50660 30.197 457 280 8 29 450 39 491 1.16e-58 201
MsG0580029764.01.T01 AT3G19270 27.626 438 304 6 6 442 11 436 5.56e-58 198
MsG0580029764.01.T01 AT1G19630 28.062 449 315 6 5 450 9 452 7.90e-58 198
MsG0580029764.01.T01 AT1G19630 28.571 441 307 6 5 442 9 444 8.97e-58 197
MsG0580029764.01.T01 AT3G30180 27.637 474 325 8 1 470 5 464 1.16e-57 197
MsG0580029764.01.T01 AT1G12740 23.913 460 341 5 1 456 1 455 1.55e-56 195
MsG0580029764.01.T01 AT5G36140 32.781 302 192 5 15 311 16 311 2.67e-55 187
MsG0580029764.01.T01 AT1G12740 23.391 466 341 6 2 456 1 461 5.20e-54 188
MsG0580029764.01.T01 AT1G12740 23.176 466 342 6 2 456 1 461 1.08e-53 187
MsG0580029764.01.T01 AT5G38970 26.778 478 328 10 1 470 1 464 3.64e-53 186
MsG0580029764.01.T01 AT2G29090 29.380 371 247 7 105 470 26 386 1.76e-50 176
MsG0580029764.01.T01 AT1G19630 28.250 400 281 5 5 401 9 405 8.50e-50 176
MsG0580029764.01.T01 AT5G05690 29.058 382 262 6 29 409 31 404 2.19e-49 174
MsG0580029764.01.T01 AT1G73340 24.845 483 337 6 2 471 11 480 2.45e-49 176
MsG0580029764.01.T01 AT5G14400 25.393 445 300 6 34 473 1 418 2.65e-49 174
MsG0580029764.01.T01 AT1G55940 25.358 489 340 14 2 474 16 495 6.08e-48 172
MsG0580029764.01.T01 AT1G55940 25.821 457 314 14 2 442 16 463 2.78e-46 167
MsG0580029764.01.T01 AT3G50660 29.073 399 255 7 29 403 39 433 2.95e-46 167
MsG0580029764.01.T01 AT1G65670 27.027 444 299 9 1 438 10 434 8.20e-46 166
MsG0580029764.01.T01 AT5G14400 25.121 414 278 6 34 442 1 387 1.33e-45 164
MsG0580029764.01.T01 AT5G38970 27.062 388 271 7 86 470 5 383 6.04e-44 159
MsG0580029764.01.T01 AT5G38970 27.062 388 271 7 86 470 5 383 6.04e-44 159
MsG0580029764.01.T01 AT5G05690 31.790 324 210 7 123 443 6 321 1.67e-43 157
MsG0580029764.01.T01 AT4G15300 27.009 448 298 13 1 438 10 438 4.69e-42 156
MsG0580029764.01.T01 AT4G15300 27.069 447 297 13 2 438 1 428 4.84e-42 155
MsG0580029764.01.T01 AT5G38970 25.862 406 283 7 1 400 1 394 1.75e-41 153
MsG0580029764.01.T01 AT3G44970 26.998 463 311 12 24 472 30 479 2.35e-41 154
MsG0580029764.01.T01 AT5G48000 26.068 468 315 12 17 469 23 474 5.24e-41 153
MsG0580029764.01.T01 AT5G48000 26.068 468 315 12 17 469 23 474 5.24e-41 153
MsG0580029764.01.T01 AT5G48000 26.068 468 315 12 17 469 23 474 5.24e-41 153
MsG0580029764.01.T01 AT5G48000 26.068 468 315 12 17 469 23 474 5.24e-41 153
MsG0580029764.01.T01 AT5G48000 26.068 468 315 12 17 469 23 474 5.24e-41 153
MsG0580029764.01.T01 AT5G48000 26.068 468 315 12 17 469 23 474 5.24e-41 153
MsG0580029764.01.T01 AT5G48000 26.124 467 314 12 17 468 64 514 1.66e-40 152
MsG0580029764.01.T01 AT5G14400 25.641 390 258 6 89 473 2 364 5.88e-39 145
MsG0580029764.01.T01 AT5G36130 43.571 140 76 2 334 471 1 139 5.69e-38 135
MsG0580029764.01.T01 AT1G78490 23.467 473 349 8 4 469 8 474 6.14e-38 144
MsG0580029764.01.T01 AT1G12740 22.102 371 280 4 2 368 1 366 3.57e-37 140
MsG0580029764.01.T01 AT4G15396 23.874 444 317 9 3 438 9 439 2.24e-36 140
MsG0580029764.01.T01 AT4G15396 23.874 444 317 9 3 438 9 439 2.34e-36 140
MsG0580029764.01.T01 AT4G36380 25.882 340 248 3 29 366 69 406 1.66e-34 134
MsG0580029764.01.T01 AT4G15393 24.270 445 312 11 3 438 9 437 4.11e-34 134
MsG0580029764.01.T01 AT4G15300 25.373 469 299 15 2 438 1 450 4.91e-34 134
MsG0580029764.01.T01 AT5G14400 24.852 338 241 4 34 366 1 330 6.70e-31 122
MsG0580029764.01.T01 AT4G15396 22.072 444 304 9 3 438 9 418 1.71e-27 115
MsG0580029764.01.T01 AT3G30290 25.798 376 259 9 70 438 6 368 8.52e-27 112
MsG0580029764.01.T01 AT5G67310 24.330 485 314 16 2 455 15 477 1.31e-26 112
MsG0580029764.01.T01 AT4G15396 22.963 405 293 8 3 401 9 400 1.41e-26 111
MsG0580029764.01.T01 AT1G78490 22.794 408 303 7 3 404 7 408 1.97e-26 111
MsG0580029764.01.T01 AT4G15310 23.515 421 306 9 24 438 31 441 4.74e-26 110
MsG0580029764.01.T01 AT4G15393 23.342 407 289 10 3 402 9 399 6.79e-25 106
MsG0580029764.01.T01 AT2G45550 25.625 480 304 17 7 446 9 475 1.03e-23 104
MsG0580029764.01.T01 AT5G25140 24.152 501 334 18 2 473 1 484 1.73e-22 100
MsG0580029764.01.T01 AT4G37410 23.529 493 331 18 5 468 7 482 2.45e-21 97.1
MsG0580029764.01.T01 AT4G37330 24.944 445 298 12 5 427 7 437 3.70e-21 96.7
MsG0580029764.01.T01 AT2G34490 24.213 508 321 18 2 471 11 492 4.56e-21 96.3
MsG0580029764.01.T01 AT4G12320 23.480 477 312 18 9 446 19 481 1.01e-20 95.5
MsG0580029764.01.T01 AT4G15393 24.257 404 256 12 3 402 9 366 1.27e-20 93.6
MsG0580029764.01.T01 AT5G57220 24.359 468 303 20 5 443 6 451 1.71e-20 94.4
MsG0580029764.01.T01 AT3G48280 23.060 464 331 14 1 446 1 456 3.72e-20 93.6
MsG0580029764.01.T01 AT2G26170 22.290 489 306 13 7 442 21 488 1.15e-19 92.0
MsG0580029764.01.T01 AT4G37320 24.838 463 309 14 5 442 7 455 1.32e-19 92.0
MsG0580029764.01.T01 AT1G50520 25.678 479 302 16 5 443 15 479 1.33e-19 92.0
MsG0580029764.01.T01 AT2G45570 24.105 419 280 13 60 446 64 476 1.74e-19 91.7
MsG0580029764.01.T01 AT3G20140 22.523 444 308 15 29 446 42 475 2.84e-19 90.9
MsG0580029764.01.T01 AT4G37430 23.158 475 316 16 1 442 1 459 3.59e-19 90.5
MsG0580029764.01.T01 AT5G47990 22.782 417 274 12 63 443 72 476 3.91e-19 90.5
MsG0580029764.01.T01 AT4G37340 24.353 464 313 18 4 442 5 455 4.07e-19 90.5
MsG0580029764.01.T01 AT2G26170 28.125 256 158 8 197 442 166 405 5.07e-19 89.7
MsG0580029764.01.T01 AT5G25180 23.589 496 335 18 6 473 5 484 6.59e-19 89.7
MsG0580029764.01.T01 AT2G29090 23.158 285 204 5 28 309 48 320 7.72e-19 88.2
MsG0580029764.01.T01 AT5G25120 22.581 496 339 17 6 473 6 484 8.49e-19 89.4
MsG0580029764.01.T01 AT2G26710 24.403 377 257 12 90 446 120 488 2.02e-18 88.2
MsG0580029764.01.T01 AT5G42580 22.113 407 281 12 64 446 70 464 2.18e-18 88.2
MsG0580029764.01.T01 AT4G13770 23.701 481 317 18 2 446 1 467 3.95e-18 87.4
MsG0580029764.01.T01 AT1G31800 21.525 446 299 11 37 446 111 541 4.19e-18 87.4
MsG0580029764.01.T01 AT3G20120 22.998 487 328 14 1 449 4 481 7.05e-18 86.7
MsG0580029764.01.T01 AT4G37400 23.126 467 315 16 5 443 7 457 7.07e-18 86.7
MsG0580029764.01.T01 AT3G28740 25.714 385 234 15 87 442 102 463 1.31e-17 85.9
MsG0580029764.01.T01 AT5G36220 25.159 473 300 19 5 442 8 461 1.81e-17 85.5
MsG0580029764.01.T01 AT3G53130 22.222 432 287 11 56 453 103 519 1.89e-17 85.5
MsG0580029764.01.T01 AT5G06900 22.472 445 307 15 5 423 10 442 1.94e-17 85.1
MsG0580029764.01.T01 AT1G66540 27.039 233 155 7 214 442 62 283 2.01e-17 83.6
MsG0580029764.01.T01 AT1G33720 22.737 475 323 15 6 446 11 475 2.33e-17 85.1
MsG0580029764.01.T01 AT2G34500 25.561 446 296 17 2 427 11 440 2.44e-17 84.7
MsG0580029764.01.T01 AT3G20090 22.453 481 329 11 2 449 14 483 2.53e-17 85.1
MsG0580029764.01.T01 AT3G20110 24.000 475 319 15 4 449 11 472 2.75e-17 84.7
MsG0580029764.01.T01 AT1G66540 26.778 239 160 7 208 442 115 342 4.47e-17 83.2
MsG0580029764.01.T01 AT3G25180 27.570 214 136 8 237 442 267 469 4.61e-17 84.0
MsG0580029764.01.T01 AT1G64940 28.889 225 145 6 232 445 258 478 5.03e-17 84.0
MsG0580029764.01.T01 AT3G20100 22.171 433 304 12 43 446 51 479 5.38e-17 84.0
MsG0580029764.01.T01 AT3G14680 23.762 404 269 14 69 446 95 485 5.71e-17 84.0
MsG0580029764.01.T01 AT4G15110 26.518 313 173 13 177 446 252 550 6.89e-17 84.0
MsG0580029764.01.T01 AT1G11680 22.056 467 329 15 1 448 10 460 6.99e-17 83.6
MsG0580029764.01.T01 AT2G45560 25.156 481 305 19 7 446 9 475 7.02e-17 83.6
MsG0580029764.01.T01 AT2G28860 23.651 482 304 18 27 471 34 488 8.20e-17 83.2
MsG0580029764.01.T01 AT4G37370 21.692 461 298 16 4 427 5 439 9.01e-17 83.2
MsG0580029764.01.T01 AT5G52400 23.143 350 241 13 115 446 153 492 1.17e-16 82.8
MsG0580029764.01.T01 AT5G24910 26.592 267 175 8 216 468 270 529 1.46e-16 82.8
MsG0580029764.01.T01 AT4G37360 23.696 460 307 19 11 442 12 455 1.67e-16 82.4
MsG0580029764.01.T01 AT5G24900 29.064 203 122 7 273 467 210 398 1.76e-16 81.6
MsG0580029764.01.T01 AT5G04330 23.779 471 280 17 27 446 30 472 2.19e-16 82.0
MsG0580029764.01.T01 AT4G15330 21.398 472 335 11 5 449 14 476 2.25e-16 82.0
MsG0580029764.01.T01 AT5G24900 29.353 201 124 6 273 467 327 515 3.47e-16 81.3
MsG0580029764.01.T01 AT3G26280 24.569 464 274 17 15 427 14 452 4.10e-16 81.3
MsG0580029764.01.T01 AT3G14630 26.510 298 199 11 163 446 245 536 4.13e-16 81.3
MsG0580029764.01.T01 AT3G26280 24.569 464 274 17 15 427 31 469 4.82e-16 80.9
MsG0580029764.01.T01 AT3G14630 26.510 298 199 11 163 446 190 481 4.87e-16 80.9
MsG0580029764.01.T01 AT4G15350 23.684 418 284 13 63 450 65 477 5.25e-16 80.9
MsG0580029764.01.T01 AT5G44620 26.582 237 159 8 219 446 252 482 6.92e-16 80.5
MsG0580029764.01.T01 AT3G61040 30.303 198 127 5 244 433 258 452 8.09e-16 80.1
MsG0580029764.01.T01 AT4G15360 23.319 476 323 15 5 449 15 479 8.36e-16 80.1
MsG0580029764.01.T01 AT3G32047 22.458 472 331 12 5 449 16 479 9.19e-16 80.1
MsG0580029764.01.T01 AT3G14640 25.581 301 199 10 163 446 195 487 9.49e-16 80.1
MsG0580029764.01.T01 AT3G14640 25.418 299 202 9 163 446 217 509 1.06e-15 80.1
MsG0580029764.01.T01 AT3G20950 21.978 455 321 11 21 446 34 483 1.17e-15 79.7
MsG0580029764.01.T01 AT3G14610 24.503 302 209 9 159 446 189 485 1.49e-15 79.3
MsG0580029764.01.T01 AT3G56630 24.252 301 194 10 169 442 173 466 1.72e-15 79.3
MsG0580029764.01.T01 AT1G64950 28.000 225 147 6 232 445 257 477 1.92e-15 79.0
MsG0580029764.01.T01 AT1G33720 25.424 295 193 9 174 446 54 343 1.99e-15 78.2
MsG0580029764.01.T01 AT1G33720 25.424 295 193 9 174 446 54 343 1.99e-15 78.2
MsG0580029764.01.T01 AT1G33720 25.424 295 193 9 174 446 54 343 1.99e-15 78.2
MsG0580029764.01.T01 AT4G13290 23.195 457 302 15 19 446 22 458 2.78e-15 78.6
MsG0580029764.01.T01 AT3G10570 20.379 422 290 10 56 442 68 478 3.45e-15 78.2
MsG0580029764.01.T01 AT2G46950 23.377 385 260 11 86 449 176 546 6.18e-15 77.8
MsG0580029764.01.T01 AT5G24950 22.976 457 303 17 22 446 25 464 9.34e-15 77.0
MsG0580029764.01.T01 AT4G31500 22.567 483 319 19 2 446 1 466 9.67e-15 77.0
MsG0580029764.01.T01 AT1G33730 23.810 294 199 7 174 446 50 339 9.83e-15 75.9
MsG0580029764.01.T01 AT1G33730 23.810 294 199 7 174 446 50 339 9.83e-15 75.9
MsG0580029764.01.T01 AT3G48300 21.359 412 291 14 63 451 58 459 1.02e-14 76.6
MsG0580029764.01.T01 AT3G48300 21.359 412 291 14 63 451 60 461 1.03e-14 76.6
MsG0580029764.01.T01 AT3G20935 26.556 241 145 6 234 446 69 305 1.27e-14 75.5
MsG0580029764.01.T01 AT3G44970 23.220 323 228 8 24 337 30 341 1.65e-14 75.5
MsG0580029764.01.T01 AT1G64930 28.293 205 133 5 251 445 278 478 1.89e-14 75.9
MsG0580029764.01.T01 AT2G12190 27.753 227 147 6 232 445 257 479 2.03e-14 75.9
MsG0580029764.01.T01 AT1G50560 24.793 484 313 17 5 449 15 486 2.22e-14 75.9
MsG0580029764.01.T01 AT2G45580 27.442 215 141 7 239 446 116 322 2.41e-14 74.7
MsG0580029764.01.T01 AT3G26270 28.879 232 144 8 227 446 248 470 2.58e-14 75.5
MsG0580029764.01.T01 AT3G20960 21.292 418 291 11 63 449 71 481 2.78e-14 75.5
MsG0580029764.01.T01 AT4G27710 28.821 229 149 7 226 446 268 490 3.10e-14 75.5
MsG0580029764.01.T01 AT2G45580 27.442 215 141 7 239 446 270 476 3.55e-14 75.1
MsG0580029764.01.T01 AT2G46960 24.499 449 288 18 55 470 86 516 5.34e-14 74.7
MsG0580029764.01.T01 AT3G03470 28.497 193 128 4 265 447 288 480 5.73e-14 74.3
MsG0580029764.01.T01 AT2G46960 25.552 317 207 10 173 470 94 400 5.86e-14 73.9
MsG0580029764.01.T01 AT5G25130 22.600 500 334 17 6 473 6 484 8.03e-14 73.9
MsG0580029764.01.T01 AT5G36220 27.197 239 158 8 208 442 89 315 9.11e-14 73.2
MsG0580029764.01.T01 AT5G38450 26.158 367 234 11 102 443 132 486 1.05e-13 73.6
MsG0580029764.01.T01 AT5G06905 22.156 501 322 18 10 459 9 492 1.06e-13 73.6
MsG0580029764.01.T01 AT3G26330 22.756 479 326 13 27 472 29 496 1.25e-13 73.6
MsG0580029764.01.T01 AT3G20130 21.845 412 290 10 63 446 72 479 1.33e-13 73.2
MsG0580029764.01.T01 AT1G13110 23.176 466 290 18 6 423 3 448 2.06e-13 72.8
MsG0580029764.01.T01 AT1G11600 19.672 488 338 14 18 466 24 496 2.74e-13 72.4
MsG0580029764.01.T01 AT4G15380 24.138 406 276 12 63 442 72 471 2.79e-13 72.4
MsG0580029764.01.T01 AT1G13090 22.350 434 296 13 21 423 19 442 3.02e-13 72.0
MsG0580029764.01.T01 AT1G67110 26.611 357 238 9 102 443 133 480 4.48e-13 71.6
MsG0580029764.01.T01 AT1G28430 22.695 423 291 15 44 435 51 468 4.86e-13 71.6
MsG0580029764.01.T01 AT2G27010 22.768 448 283 17 63 473 65 486 1.09e-12 70.5
MsG0580029764.01.T01 AT1G58260 19.959 486 340 15 4 446 11 490 2.55e-12 69.3
MsG0580029764.01.T01 AT3G44250 24.222 450 268 20 21 423 19 442 4.05e-12 68.6
MsG0580029764.01.T01 AT5G07990 22.737 475 324 14 4 446 7 470 5.67e-12 68.2
MsG0580029764.01.T01 AT1G74110 26.728 217 132 8 225 423 279 486 6.02e-12 68.2
MsG0580029764.01.T01 AT3G26125 24.128 344 216 13 173 473 193 534 7.62e-12 67.8
MsG0580029764.01.T01 AT1G24540 22.713 317 215 9 161 447 178 494 9.96e-12 67.4
MsG0580029764.01.T01 AT1G16400 20.518 502 327 17 6 449 13 500 1.19e-11 67.4
MsG0580029764.01.T01 AT4G36220 25.081 307 193 8 172 446 182 483 1.29e-11 67.0
MsG0580029764.01.T01 AT2G27000 22.892 415 283 11 63 446 69 477 1.83e-11 66.6
MsG0580029764.01.T01 AT5G04660 21.791 335 219 10 134 442 160 477 3.39e-11 65.9
MsG0580029764.01.T01 AT5G23190 21.726 336 227 11 173 474 210 543 4.16e-11 65.5
MsG0580029764.01.T01 AT1G33720 23.750 320 192 11 174 446 54 368 4.56e-11 65.1
MsG0580029764.01.T01 AT3G48290 21.429 406 288 14 63 446 62 458 4.77e-11 65.1
MsG0580029764.01.T01 AT1G11610 27.586 261 162 10 217 467 234 477 6.52e-11 64.7
MsG0580029764.01.T01 AT2G46660 26.768 198 119 7 241 423 290 476 7.12e-11 64.7
MsG0580029764.01.T01 AT1G11610 27.586 261 162 10 217 467 234 477 7.28e-11 64.7
MsG0580029764.01.T01 AT3G20090 25.424 236 160 5 224 449 116 345 7.59e-11 64.3
MsG0580029764.01.T01 AT2G44890 22.876 306 198 8 169 451 177 467 8.54e-11 64.3
MsG0580029764.01.T01 AT4G15330 24.893 233 161 5 227 449 220 448 9.59e-11 64.3

Find 125 sgRNAs with CRISPR-Local

Find 206 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCATTTCAATCAATAATTA+AGG 0.150288 5:-101685421 MsG0580029764.01.T01:CDS
ATTTCAAAGCTGAGTTTATT+TGG 0.177572 5:-101686259 MsG0580029764.01.T01:CDS
TATATAGTTAAAATCTTATT+AGG 0.183725 5:-101683994 MsG0580029764.01.T01:three_prime_UTR
TCACTTGGAATTCCCATTAT+TGG 0.200724 5:-101686364 MsG0580029764.01.T01:CDS
CAATTTCCTTTAACATGTTT+TGG 0.206785 5:+101685328 None:intergenic
CCCTATTGCTTTGTTCCATT+TGG 0.221258 5:-101684306 MsG0580029764.01.T01:CDS
ATATGTGCAGCTGTTCTTAA+AGG 0.254244 5:-101685096 MsG0580029764.01.T01:intron
TAGCTCTCTCATTCAACTTA+TGG 0.265555 5:-101684105 MsG0580029764.01.T01:three_prime_UTR
GGATCAAACTGTGAAGGTTC+TGG 0.277530 5:+101684360 None:intergenic
TCTCGTATTCAACTTTCTTC+TGG 0.279210 5:+101685301 None:intergenic
GCCAAGACTTTGACCAATAA+TGG 0.291356 5:+101686351 None:intergenic
AATCAGTAGCTTGCTTAGTA+TGG 0.297529 5:-101685250 MsG0580029764.01.T01:CDS
TTCATTTACCTGCCACCCTT+TGG 0.299628 5:+101684498 None:intergenic
AATAAACTCAGCTTTGAAAT+AGG 0.306490 5:+101686262 None:intergenic
CCCTTAATTATTGATTGAAA+TGG 0.322436 5:+101685420 None:intergenic
TCATTTACCTGCCACCCTTT+GGG 0.336801 5:+101684499 None:intergenic
TTCTAATCACTTTCATTATC+CGG 0.339903 5:-101685140 MsG0580029764.01.T01:CDS
AAGGATCCAAAACATGTTAA+AGG 0.340489 5:-101685334 MsG0580029764.01.T01:CDS
GATTAAGTCTTGGCGGGAAT+TGG 0.341640 5:+101685269 None:intergenic
CCATGACAAGCATAGCATTA+TGG 0.342858 5:+101685187 None:intergenic
TGAAAGTGAGAGTCTTCATT+AGG 0.347580 5:+101685505 None:intergenic
CAGTCAATTAAGATGATATT+AGG 0.348659 5:-101686151 MsG0580029764.01.T01:CDS
AAGTAGCTTACAACTGAATT+TGG 0.352974 5:+101684209 None:intergenic
ACTACAACAGATATTGAATA+TGG 0.357661 5:-101684535 MsG0580029764.01.T01:CDS
TGTGTAAAGGGTGCATTAAT+TGG 0.358712 5:+101685384 None:intergenic
TGAACCTGGAGGGACCCTTT+TGG 0.363172 5:+101686384 None:intergenic
TATTGCTTTGTTCCATTTGG+AGG 0.372232 5:-101684303 MsG0580029764.01.T01:CDS
GAAAGTGAGAGTCTTCATTA+GGG 0.375121 5:+101685506 None:intergenic
TCTTAATTGACTGTGTTTGC+TGG 0.376593 5:+101686161 None:intergenic
AAATCTTATTAGGACTTGTA+AGG 0.377791 5:-101683984 MsG0580029764.01.T01:three_prime_UTR
GTAAAATTGATGAAGAAGTT+AGG 0.382161 5:-101686030 MsG0580029764.01.T01:CDS
ATAATTTGTTCTCTACTGTT+TGG 0.388428 5:-101685480 MsG0580029764.01.T01:CDS
CACTTTCATTATCCGGCTCT+TGG 0.392385 5:-101685133 MsG0580029764.01.T01:CDS
GCTATGCTTGTCATGGTTGC+AGG 0.394164 5:-101685180 MsG0580029764.01.T01:CDS
CCTTGACTTGGTGTTGGCAT+TGG 0.399805 5:+101684162 None:intergenic
CCCATTATTGGTCAAAGTCT+TGG 0.402311 5:-101686352 MsG0580029764.01.T01:CDS
AAGACTCTGGCTTCAAGAAC+GGG 0.416106 5:+101686068 None:intergenic
GATCAAACTGTGAAGGTTCT+GGG 0.417095 5:+101684361 None:intergenic
TCCAAATGGAACAAAGCAAT+AGG 0.421660 5:+101684305 None:intergenic
GAAGACAGAATCAACAAGTA+TGG 0.428167 5:-101686286 MsG0580029764.01.T01:CDS
AGAGAACTGGAATGAGTAAG+AGG 0.433239 5:+101686431 None:intergenic
GATAGCTAAAGGCAAGCTCT+TGG 0.437620 5:-101684662 MsG0580029764.01.T01:CDS
GAGAGCTAAGATAGTTTCCT+TGG 0.437949 5:+101684120 None:intergenic
CCATTTCAATCAATAATTAA+GGG 0.443637 5:-101685420 MsG0580029764.01.T01:CDS
GTTTGCTAGGGTTGAAACTC+TGG 0.444311 5:-101684253 MsG0580029764.01.T01:CDS
CCAAGACTTTGACCAATAAT+GGG 0.446353 5:+101686352 None:intergenic
TTTCAGACAATTCTTTCAGC+AGG 0.447243 5:-101684188 MsG0580029764.01.T01:CDS
TTTCAAAGATGAAGTATACT+TGG 0.454805 5:-101684615 MsG0580029764.01.T01:CDS
AAAGAACCAAACCATCCAAA+AGG 0.460934 5:-101686399 MsG0580029764.01.T01:CDS
AACAATATTCTCATCGCGAT+TGG 0.464065 5:+101686186 None:intergenic
TGCTTTGTTCCATTTGGAGG+GGG 0.465672 5:-101684300 MsG0580029764.01.T01:CDS
ATTGCTTTGTTCCATTTGGA+GGG 0.470980 5:-101684302 MsG0580029764.01.T01:CDS
ATAGCTAAAGGCAAGCTCTT+GGG 0.475372 5:-101684661 MsG0580029764.01.T01:CDS
GGAGGCACATTCAGATGCAT+TGG 0.476070 5:-101686009 MsG0580029764.01.T01:CDS
GTGTAAAGGGTGCATTAATT+GGG 0.486122 5:+101685385 None:intergenic
AATAGGGTGGGGTAGATGCC+AGG 0.491827 5:+101684322 None:intergenic
AGGGTCCCTCCAGGTTCACT+TGG 0.493375 5:-101686379 MsG0580029764.01.T01:CDS
ACCCTAGCAAACTCATATCC+TGG 0.493624 5:+101684264 None:intergenic
TTGCACTCTCCTTGAGGCTG+CGG 0.494896 5:+101685355 None:intergenic
CATTATACCCAAAGGGTGGC+AGG 0.498119 5:-101684506 MsG0580029764.01.T01:intron
GTCCAGGATATGAGTTTGCT+AGG 0.499490 5:-101684266 MsG0580029764.01.T01:CDS
GAGGCACATTCAGATGCATT+GGG 0.503281 5:-101686008 MsG0580029764.01.T01:CDS
AGAACAGCTGCACATATAGC+TGG 0.505191 5:+101685102 None:intergenic
ATGGGAATTCCAAGTGAACC+TGG 0.508975 5:+101686370 None:intergenic
TTGCTTAGTATGGTTGAAGA+TGG 0.509580 5:-101685240 MsG0580029764.01.T01:CDS
CCAAATGGAACAAAGCAATA+GGG 0.510553 5:+101684306 None:intergenic
AATCTTATTAGGACTTGTAA+GGG 0.517515 5:-101683983 MsG0580029764.01.T01:three_prime_UTR
TTCAGACAATTCTTTCAGCA+GGG 0.522736 5:-101684187 MsG0580029764.01.T01:CDS
AAAGACTCTGGCTTCAAGAA+CGG 0.523087 5:+101686067 None:intergenic
AAGAAGAACACTAGCCATCA+TGG 0.530283 5:+101686462 None:intergenic
AAGAACCAAACCATCCAAAA+GGG 0.531049 5:-101686398 MsG0580029764.01.T01:CDS
GTGGATACATTATACCCAAA+GGG 0.533054 5:-101684513 MsG0580029764.01.T01:CDS
TCCAAGTAGATTTGAAAACC+TGG 0.533843 5:-101684340 MsG0580029764.01.T01:CDS
GATAATGAAAGTGATTAGAA+TGG 0.534231 5:+101685143 None:intergenic
ACATATTGCTTCAAAGACTC+TGG 0.534467 5:+101686055 None:intergenic
CTACTGTTTGGTCTTGAGCG+TGG 0.535265 5:-101685468 MsG0580029764.01.T01:CDS
TTAAGATGATATTAGGCGAC+AGG 0.535591 5:-101686144 MsG0580029764.01.T01:CDS
CTGCGGTTGTAGTGTGTAAA+GGG 0.540198 5:+101685372 None:intergenic
GCAAGCTACTGATTAAGTCT+TGG 0.541480 5:+101685259 None:intergenic
GCTGCGGTTGTAGTGTGTAA+AGG 0.544877 5:+101685371 None:intergenic
AGAGCTAAGATAGTTTCCTT+GGG 0.546492 5:+101684121 None:intergenic
TCCAGGATATGAGTTTGCTA+GGG 0.548383 5:-101684265 MsG0580029764.01.T01:CDS
TTTCTGAATCCACCAAAGAT+GGG 0.552226 5:+101684559 None:intergenic
AGCTACTGATTAAGTCTTGG+CGG 0.552797 5:+101685262 None:intergenic
CCATCCAAAAGGGTCCCTCC+AGG 0.555753 5:-101686388 MsG0580029764.01.T01:CDS
GCTACTGATTAAGTCTTGGC+GGG 0.557526 5:+101685263 None:intergenic
AATCAATAATTAAGGGAATG+TGG 0.560339 5:-101685413 MsG0580029764.01.T01:CDS
TTGGGCAAAGTTCAATCAGT+AGG 0.560761 5:+101684139 None:intergenic
AAGTATACTTCATCTTTGAA+AGG 0.563144 5:+101684617 None:intergenic
CACATTCAGATGCATTGGGA+AGG 0.563148 5:-101686004 MsG0580029764.01.T01:CDS
GAACAGGAAGAGATAGCTAA+AGG 0.567417 5:-101684673 MsG0580029764.01.T01:CDS
GGATCCTTGCACTCTCCTTG+AGG 0.567712 5:+101685349 None:intergenic
TCAATCAGTAGGCCTTGACT+TGG 0.569123 5:+101684150 None:intergenic
CTGGTTCATTAGCCAAGAGC+CGG 0.570121 5:+101685121 None:intergenic
TTGCTTTGTTCCATTTGGAG+GGG 0.575275 5:-101684301 MsG0580029764.01.T01:CDS
GTATACTTGGAGAGTAGCAA+TGG 0.576473 5:-101684602 MsG0580029764.01.T01:CDS
AGTAGGCCTTGACTTGGTGT+TGG 0.577020 5:+101684156 None:intergenic
AAAGATCATAGCAGAGTCAG+AGG 0.577259 5:-101686100 MsG0580029764.01.T01:CDS
CTACTTGGATCAAACTGTGA+AGG 0.583030 5:+101684354 None:intergenic
CCATAATGCTATGCTTGTCA+TGG 0.584435 5:-101685187 MsG0580029764.01.T01:CDS
TGGCGCGCATAGCACGAAGA+AGG 0.584948 5:+101686329 None:intergenic
TACAACTGAATTTGGTCACA+AGG 0.589571 5:+101684217 None:intergenic
ATGGAACAAAGCAATAGGGT+GGG 0.590236 5:+101684310 None:intergenic
ACACTACAACCGCAGCCTCA+AGG 0.596576 5:-101685364 MsG0580029764.01.T01:CDS
TACTGATTGAACTTTGCCCA+AGG 0.603194 5:-101684137 MsG0580029764.01.T01:CDS
TGCTAGGGTTGAAACTCTGG+TGG 0.603607 5:-101684250 MsG0580029764.01.T01:CDS
ACATTCAGATGCATTGGGAA+GGG 0.609178 5:-101686003 MsG0580029764.01.T01:CDS
TGTCCATGAATCAAAACAGT+TGG 0.610102 5:+101686232 None:intergenic
GGAAGGGAAACAGCAGCTCA+AGG 0.612285 5:-101685987 MsG0580029764.01.T01:intron
AATGGAACAAAGCAATAGGG+TGG 0.612767 5:+101684309 None:intergenic
GGTGGATACATTATACCCAA+AGG 0.613475 5:-101684514 MsG0580029764.01.T01:CDS
ACAACAGATATTGAATATGG+TGG 0.615515 5:-101684532 MsG0580029764.01.T01:CDS
CTTGGGAGAGACTCTAACAT+GGG 0.619914 5:-101684644 MsG0580029764.01.T01:CDS
GAGTCTTTGAAGCAATATGT+TGG 0.626184 5:-101686052 MsG0580029764.01.T01:CDS
GCAGCCTCAAGGAGAGTGCA+AGG 0.626274 5:-101685353 MsG0580029764.01.T01:CDS
TAGCAATGGAAACTCTGAGA+AGG 0.628710 5:-101684588 MsG0580029764.01.T01:CDS
GGTTACATCAATGACTCACA+TGG 0.634614 5:-101684397 MsG0580029764.01.T01:CDS
TGGAACAAAGCAATAGGGTG+GGG 0.639436 5:+101684311 None:intergenic
TCTTGGGAGAGACTCTAACA+TGG 0.644772 5:-101684645 MsG0580029764.01.T01:CDS
GAATTCCAAGTGAACCTGGA+GGG 0.647416 5:+101686374 None:intergenic
CCAATGCCAACACCAAGTCA+AGG 0.656183 5:-101684162 MsG0580029764.01.T01:CDS
AAATTGATGAAGAAGTTAGG+AGG 0.660620 5:-101686027 MsG0580029764.01.T01:CDS
AAAGTGAGAGTCTTCATTAG+GGG 0.663881 5:+101685507 None:intergenic
GATACATTATACCCAAAGGG+TGG 0.706221 5:-101684510 MsG0580029764.01.T01:CDS
GGAATTCCAAGTGAACCTGG+AGG 0.730756 5:+101686373 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATAGTTAAAATCTTATT+AGG - Chr5:101686408-101686427 MsG0580029764.01.T01:CDS 10.0%
!!! TTTTTTTTTTTTTTTCTGAT+AGG - Chr5:101684867-101684886 MsG0580029764.01.T01:intron 10.0%
!!! TTTCTTTTTATAGATCTTTT+GGG - Chr5:101685984-101686003 MsG0580029764.01.T01:intron 15.0%
!!! TTTTCTTTTTATAGATCTTT+TGG - Chr5:101685983-101686002 MsG0580029764.01.T01:intron 15.0%
!! AGAAAACGAAAAAAATTTAG+GGG - Chr5:101685466-101685485 MsG0580029764.01.T01:CDS 20.0%
!! AGAGAAAACGAAAAAAATTT+AGG - Chr5:101685464-101685483 MsG0580029764.01.T01:CDS 20.0%
!! CAAAAGCTAATAAAAATACA+TGG - Chr5:101684464-101684483 MsG0580029764.01.T01:intron 20.0%
!! CCATTTCAATCAATAATTAA+GGG - Chr5:101684982-101685001 MsG0580029764.01.T01:intron 20.0%
!! GAGAAAACGAAAAAAATTTA+GGG - Chr5:101685465-101685484 MsG0580029764.01.T01:CDS 20.0%
!! TATGTTAATGTGTATTTACT+TGG + Chr5:101684610-101684629 None:intergenic 20.0%
!! TCCATTTCAATCAATAATTA+AGG - Chr5:101684981-101685000 MsG0580029764.01.T01:intron 20.0%
!!! ACTTGATTACATATTCTTTT+TGG - Chr5:101684804-101684823 MsG0580029764.01.T01:intron 20.0%
!!! CTTGATTACATATTCTTTTT+GGG - Chr5:101684805-101684824 MsG0580029764.01.T01:intron 20.0%
! AAAAAATTTAGGGGATGTAA+AGG - Chr5:101685475-101685494 MsG0580029764.01.T01:CDS 25.0%
! AAAGTTGAATACGAGAAAAA+TGG - Chr5:101685108-101685127 MsG0580029764.01.T01:CDS 25.0%
! AAATCTTATTAGGACTTGTA+AGG - Chr5:101686418-101686437 MsG0580029764.01.T01:CDS 25.0%
! AAGTATACTTCATCTTTGAA+AGG + Chr5:101685788-101685807 None:intergenic 25.0%
! AATCAATAATTAAGGGAATG+TGG - Chr5:101684989-101685008 MsG0580029764.01.T01:intron 25.0%
! AATCTTATTAGGACTTGTAA+GGG - Chr5:101686419-101686438 MsG0580029764.01.T01:CDS 25.0%
! ACTACAACAGATATTGAATA+TGG - Chr5:101685867-101685886 MsG0580029764.01.T01:intron 25.0%
! AGTAGTATTAAGTTACTTGA+TGG - Chr5:101684744-101684763 MsG0580029764.01.T01:intron 25.0%
! ATCGAGAATACTTAAAATGA+AGG - Chr5:101685671-101685690 MsG0580029764.01.T01:intron 25.0%
! ATGACTTGATTTACTTGAAT+AGG - Chr5:101684713-101684732 MsG0580029764.01.T01:intron 25.0%
! ATTCCCGTAAAAATCTTATT+AGG + Chr5:101686327-101686346 None:intergenic 25.0%
! ATTTCAAAGCTGAGTTTATT+TGG - Chr5:101684143-101684162 MsG0580029764.01.T01:CDS 25.0%
! CAGTCAATTAAGATGATATT+AGG - Chr5:101684251-101684270 MsG0580029764.01.T01:CDS 25.0%
! GATAATGAAAGTGATTAGAA+TGG + Chr5:101685262-101685281 None:intergenic 25.0%
! GTAAAATTGATGAAGAAGTT+AGG - Chr5:101684372-101684391 MsG0580029764.01.T01:CDS 25.0%
! GTAGTATTAAGTTACTTGAT+GGG - Chr5:101684745-101684764 MsG0580029764.01.T01:intron 25.0%
! TAAGAAATGAAAACTGAAGT+AGG - Chr5:101684829-101684848 MsG0580029764.01.T01:intron 25.0%
! TACAATACTAGTACAGATAT+GGG - Chr5:101684559-101684578 MsG0580029764.01.T01:CDS 25.0%
! TTCCCGTAAAAATCTTATTA+GGG + Chr5:101686326-101686345 None:intergenic 25.0%
! TTCTAATCACTTTCATTATC+CGG - Chr5:101685262-101685281 MsG0580029764.01.T01:CDS 25.0%
! TTTCAAAGATGAAGTATACT+TGG - Chr5:101685787-101685806 MsG0580029764.01.T01:intron 25.0%
!! CAATTTCCTTTAACATGTTT+TGG + Chr5:101685077-101685096 None:intergenic 25.0%
!! CCCTTAATTATTGATTGAAA+TGG + Chr5:101684985-101685004 None:intergenic 25.0%
!!! AATAAACTCAGCTTTGAAAT+AGG + Chr5:101684143-101684162 None:intergenic 25.0%
!!! ATAATTTGTTCTCTACTGTT+TGG - Chr5:101684922-101684941 MsG0580029764.01.T01:intron 25.0%
!!! TTGGTCATTTTAGAAAAATC+CGG + Chr5:101684591-101684610 None:intergenic 25.0%
AAATGAAGGCAAAGAAATCT+TGG - Chr5:101685685-101685704 MsG0580029764.01.T01:intron 30.0%
AAATTGATGAAGAAGTTAGG+AGG - Chr5:101684375-101684394 MsG0580029764.01.T01:CDS 30.0%
AAGGATCCAAAACATGTTAA+AGG - Chr5:101685068-101685087 MsG0580029764.01.T01:intron 30.0%
AAGTAGCTTACAACTGAATT+TGG + Chr5:101686196-101686215 None:intergenic 30.0%
ACAACAGATATTGAATATGG+TGG - Chr5:101685870-101685889 MsG0580029764.01.T01:intron 30.0%
GTACAATACTAGTACAGATA+TGG - Chr5:101684558-101684577 MsG0580029764.01.T01:CDS 30.0%
TCCCGTAAAAATCTTATTAG+GGG + Chr5:101686325-101686344 None:intergenic 30.0%
TTGTATGTCTCTCCTAAATT+TGG + Chr5:101685520-101685539 None:intergenic 30.0%
! AAATACATGGTGTTAACTTG+TGG - Chr5:101684477-101684496 MsG0580029764.01.T01:intron 30.0%
! GATTTTTATGATTGCAGAAC+AGG - Chr5:101685713-101685732 MsG0580029764.01.T01:intron 30.0%
! TCCCCCTAATAAGATTTTTA+CGG - Chr5:101686320-101686339 MsG0580029764.01.T01:CDS 30.0%
!! GTTAACTTGTGGTAATCTAT+AGG - Chr5:101684488-101684507 MsG0580029764.01.T01:intron 30.0%
AAAGAACCAAACCATCCAAA+AGG - Chr5:101684003-101684022 MsG0580029764.01.T01:three_prime_UTR 35.0%
AAAGTGAGAGTCTTCATTAG+GGG + Chr5:101684898-101684917 None:intergenic 35.0%
AAATTTAGGGGATGTAAAGG+AGG - Chr5:101685478-101685497 MsG0580029764.01.T01:CDS 35.0%
AACAATATTCTCATCGCGAT+TGG + Chr5:101684219-101684238 None:intergenic 35.0%
AAGAACCAAACCATCCAAAA+GGG - Chr5:101684004-101684023 MsG0580029764.01.T01:three_prime_UTR 35.0%
ACAGAAGGAAAAATTAGGGT+GGG - Chr5:101685425-101685444 MsG0580029764.01.T01:CDS 35.0%
ACATATTGCTTCAAAGACTC+TGG + Chr5:101684350-101684369 None:intergenic 35.0%
AGAGCTAAGATAGTTTCCTT+GGG + Chr5:101686284-101686303 None:intergenic 35.0%
AGCCTACAGAAGGAAAAATT+AGG - Chr5:101685420-101685439 MsG0580029764.01.T01:CDS 35.0%
ATATGTGCAGCTGTTCTTAA+AGG - Chr5:101685306-101685325 MsG0580029764.01.T01:CDS 35.0%
CAGATAGATTGTCCATTAAC+TGG + Chr5:101684526-101684545 None:intergenic 35.0%
CCAAATGGAACAAAGCAATA+GGG + Chr5:101686099-101686118 None:intergenic 35.0%
CCAAGACTTTGACCAATAAT+GGG + Chr5:101684053-101684072 None:intergenic 35.0%
CCCGTAAAAATCTTATTAGG+GGG + Chr5:101686324-101686343 None:intergenic 35.0%
CTTGTGGTAATCTATAGGAT+CGG - Chr5:101684493-101684512 MsG0580029764.01.T01:intron 35.0%
GAAAGTGAGAGTCTTCATTA+GGG + Chr5:101684899-101684918 None:intergenic 35.0%
GAAGACAGAATCAACAAGTA+TGG - Chr5:101684116-101684135 MsG0580029764.01.T01:exon 35.0%
GCCTACAGAAGGAAAAATTA+GGG - Chr5:101685421-101685440 MsG0580029764.01.T01:CDS 35.0%
GTGGATACATTATACCCAAA+GGG - Chr5:101685889-101685908 MsG0580029764.01.T01:intron 35.0%
TACAACTGAATTTGGTCACA+AGG + Chr5:101686188-101686207 None:intergenic 35.0%
TACAGAAGGAAAAATTAGGG+TGG - Chr5:101685424-101685443 MsG0580029764.01.T01:CDS 35.0%
TAGCTCTCTCATTCAACTTA+TGG - Chr5:101686297-101686316 MsG0580029764.01.T01:CDS 35.0%
TCACTTGGAATTCCCATTAT+TGG - Chr5:101684038-101684057 MsG0580029764.01.T01:three_prime_UTR 35.0%
TCCAAATGGAACAAAGCAAT+AGG + Chr5:101686100-101686119 None:intergenic 35.0%
TCCAAGTAGATTTGAAAACC+TGG - Chr5:101686062-101686081 MsG0580029764.01.T01:CDS 35.0%
TCTCGTATTCAACTTTCTTC+TGG + Chr5:101685104-101685123 None:intergenic 35.0%
TCTTAATTGACTGTGTTTGC+TGG + Chr5:101684244-101684263 None:intergenic 35.0%
TCTTGCAAAATCTCAACTGT+CGG - Chr5:101685571-101685590 MsG0580029764.01.T01:intron 35.0%
TGAAAGTGAGAGTCTTCATT+AGG + Chr5:101684900-101684919 None:intergenic 35.0%
TGTCCATGAATCAAAACAGT+TGG + Chr5:101684173-101684192 None:intergenic 35.0%
TTAAGATGATATTAGGCGAC+AGG - Chr5:101684258-101684277 MsG0580029764.01.T01:CDS 35.0%
TTCAGACAATTCTTTCAGCA+GGG - Chr5:101686215-101686234 MsG0580029764.01.T01:CDS 35.0%
TTGCTTAGTATGGTTGAAGA+TGG - Chr5:101685162-101685181 MsG0580029764.01.T01:CDS 35.0%
TTTAGGAGAGACATACAAAC+AGG - Chr5:101685522-101685541 MsG0580029764.01.T01:intron 35.0%
TTTCAGACAATTCTTTCAGC+AGG - Chr5:101686214-101686233 MsG0580029764.01.T01:CDS 35.0%
TTTCTGAATCCACCAAAGAT+GGG + Chr5:101685846-101685865 None:intergenic 35.0%
! ACCCTAATTTTTCCTTCTGT+AGG + Chr5:101685425-101685444 None:intergenic 35.0%
! ATTGCTTTGTTCCATTTGGA+GGG - Chr5:101686100-101686119 MsG0580029764.01.T01:CDS 35.0%
! CAGTTAATGGACAATCTATC+TGG - Chr5:101684524-101684543 MsG0580029764.01.T01:CDS 35.0%
! CCCCCTAATAAGATTTTTAC+GGG - Chr5:101686321-101686340 MsG0580029764.01.T01:CDS 35.0%
! GTGTAAAGGGTGCATTAATT+GGG + Chr5:101685020-101685039 None:intergenic 35.0%
! TATTGCTTTGTTCCATTTGG+AGG - Chr5:101686099-101686118 MsG0580029764.01.T01:CDS 35.0%
! TGTGTAAAGGGTGCATTAAT+TGG + Chr5:101685021-101685040 None:intergenic 35.0%
! TTTTCTGAATCCACCAAAGA+TGG + Chr5:101685847-101685866 None:intergenic 35.0%
!! AATCAGTAGCTTGCTTAGTA+TGG - Chr5:101685152-101685171 MsG0580029764.01.T01:CDS 35.0%
!! CTTTTTAGCAGAAAGAGAAC+TGG + Chr5:101683987-101684006 None:intergenic 35.0%
!! GAGTCTTTGAAGCAATATGT+TGG - Chr5:101684350-101684369 MsG0580029764.01.T01:CDS 35.0%
!!! AACTGTTTTGATTCATGGAC+AGG - Chr5:101684172-101684191 MsG0580029764.01.T01:CDS 35.0%
!!! ACACCAACTGTTTTGATTCA+TGG - Chr5:101684167-101684186 MsG0580029764.01.T01:CDS 35.0%
AAAGATCATAGCAGAGTCAG+AGG - Chr5:101684302-101684321 MsG0580029764.01.T01:CDS 40.0%
AATGGAACAAAGCAATAGGG+TGG + Chr5:101686096-101686115 None:intergenic 40.0%
ACATTCAGATGCATTGGGAA+GGG - Chr5:101684399-101684418 MsG0580029764.01.T01:CDS 40.0%
AGACAGAGATCTGATTCAGA+GGG - Chr5:101684687-101684706 MsG0580029764.01.T01:intron 40.0%
AGAGAACTGGAATGAGTAAG+AGG + Chr5:101683974-101683993 None:intergenic 40.0%
AGATTGTCCATTAACTGGAG+AGG + Chr5:101684521-101684540 None:intergenic 40.0%
ATACTAGTACAGATATGGGC+AGG - Chr5:101684563-101684582 MsG0580029764.01.T01:CDS 40.0%
ATAGCTAAAGGCAAGCTCTT+GGG - Chr5:101685741-101685760 MsG0580029764.01.T01:intron 40.0%
ATGGAACAAAGCAATAGGGT+GGG + Chr5:101686095-101686114 None:intergenic 40.0%
ATGTAAAGGAGGCTGTATTG+CGG - Chr5:101685489-101685508 MsG0580029764.01.T01:CDS 40.0%
ATTGCGGAGGATCCAAATTT+AGG - Chr5:101685505-101685524 MsG0580029764.01.T01:CDS 40.0%
CCATAATGCTATGCTTGTCA+TGG - Chr5:101685215-101685234 MsG0580029764.01.T01:CDS 40.0%
CCATGACAAGCATAGCATTA+TGG + Chr5:101685218-101685237 None:intergenic 40.0%
CCCATTATTGGTCAAAGTCT+TGG - Chr5:101684050-101684069 MsG0580029764.01.T01:three_prime_UTR 40.0%
CTACTTGGATCAAACTGTGA+AGG + Chr5:101686051-101686070 None:intergenic 40.0%
GAACAGGAAGAGATAGCTAA+AGG - Chr5:101685729-101685748 MsG0580029764.01.T01:intron 40.0%
GAGAGCTAAGATAGTTTCCT+TGG + Chr5:101686285-101686304 None:intergenic 40.0%
GATACATTATACCCAAAGGG+TGG - Chr5:101685892-101685911 MsG0580029764.01.T01:intron 40.0%
GATCAAACTGTGAAGGTTCT+GGG + Chr5:101686044-101686063 None:intergenic 40.0%
GCCAAGACTTTGACCAATAA+TGG + Chr5:101684054-101684073 None:intergenic 40.0%
GGTGGATACATTATACCCAA+AGG - Chr5:101685888-101685907 MsG0580029764.01.T01:intron 40.0%
GGTTACATCAATGACTCACA+TGG - Chr5:101686005-101686024 MsG0580029764.01.T01:CDS 40.0%
GTATACTTGGAGAGTAGCAA+TGG - Chr5:101685800-101685819 MsG0580029764.01.T01:intron 40.0%
TACTAGTACAGATATGGGCA+GGG - Chr5:101684564-101684583 MsG0580029764.01.T01:CDS 40.0%
TAGACAGAGATCTGATTCAG+AGG - Chr5:101684686-101684705 MsG0580029764.01.T01:intron 40.0%
TTGGGCAAAGTTCAATCAGT+AGG + Chr5:101686266-101686285 None:intergenic 40.0%
! AAAGACTCTGGCTTCAAGAA+CGG + Chr5:101684338-101684357 None:intergenic 40.0%
! AGAAGGTTTTCTCCCATCTT+TGG - Chr5:101685831-101685850 MsG0580029764.01.T01:intron 40.0%
! AGCTACTGATTAAGTCTTGG+CGG + Chr5:101685143-101685162 None:intergenic 40.0%
! CCCTATTGCTTTGTTCCATT+TGG - Chr5:101686096-101686115 MsG0580029764.01.T01:CDS 40.0%
! GCAAGCTACTGATTAAGTCT+TGG + Chr5:101685146-101685165 None:intergenic 40.0%
! GCCAGGTTTTCAAATCTACT+TGG + Chr5:101686066-101686085 None:intergenic 40.0%
! TACTGATTGAACTTTGCCCA+AGG - Chr5:101686265-101686284 MsG0580029764.01.T01:CDS 40.0%
! TAGCAATGGAAACTCTGAGA+AGG - Chr5:101685814-101685833 MsG0580029764.01.T01:intron 40.0%
! TTGCTTTGTTCCATTTGGAG+GGG - Chr5:101686101-101686120 MsG0580029764.01.T01:CDS 40.0%
!! AACTGTCGGATTAGTCTAGA+GGG - Chr5:101685585-101685604 MsG0580029764.01.T01:intron 40.0%
!! AATCTATCTGGTATCGACAC+GGG - Chr5:101684536-101684555 MsG0580029764.01.T01:CDS 40.0%
!! CAATCTATCTGGTATCGACA+CGG - Chr5:101684535-101684554 MsG0580029764.01.T01:CDS 40.0%
!! TCCAGGATATGAGTTTGCTA+GGG - Chr5:101686137-101686156 MsG0580029764.01.T01:CDS 40.0%
ACCCTAGCAAACTCATATCC+TGG + Chr5:101686141-101686160 None:intergenic 45.0%
ACTAGTACAGATATGGGCAG+GGG - Chr5:101684565-101684584 MsG0580029764.01.T01:CDS 45.0%
AGAACAGCTGCACATATAGC+TGG + Chr5:101685303-101685322 None:intergenic 45.0%
ATCGGATCCTCTCCAGTTAA+TGG - Chr5:101684511-101684530 MsG0580029764.01.T01:CDS 45.0%
ATGGGAATTCCAAGTGAACC+TGG + Chr5:101684035-101684054 None:intergenic 45.0%
CACATTCAGATGCATTGGGA+AGG - Chr5:101684398-101684417 MsG0580029764.01.T01:CDS 45.0%
CACTTTCATTATCCGGCTCT+TGG - Chr5:101685269-101685288 MsG0580029764.01.T01:CDS 45.0%
CTGCGGTTGTAGTGTGTAAA+GGG + Chr5:101685033-101685052 None:intergenic 45.0%
CTTGGGAGAGACTCTAACAT+GGG - Chr5:101685758-101685777 MsG0580029764.01.T01:intron 45.0%
GAAGGAAAAATTAGGGTGGG+AGG - Chr5:101685428-101685447 MsG0580029764.01.T01:CDS 45.0%
GAATTCCAAGTGAACCTGGA+GGG + Chr5:101684031-101684050 None:intergenic 45.0%
GAGGCACATTCAGATGCATT+GGG - Chr5:101684394-101684413 MsG0580029764.01.T01:CDS 45.0%
GATAGCTAAAGGCAAGCTCT+TGG - Chr5:101685740-101685759 MsG0580029764.01.T01:intron 45.0%
GATTAAGTCTTGGCGGGAAT+TGG + Chr5:101685136-101685155 None:intergenic 45.0%
GGATCAAACTGTGAAGGTTC+TGG + Chr5:101686045-101686064 None:intergenic 45.0%
TCAATCAGTAGGCCTTGACT+TGG + Chr5:101686255-101686274 None:intergenic 45.0%
TCATTTACCTGCCACCCTTT+GGG + Chr5:101685906-101685925 None:intergenic 45.0%
TCTTGGGAGAGACTCTAACA+TGG - Chr5:101685757-101685776 MsG0580029764.01.T01:intron 45.0%
TGGAACAAAGCAATAGGGTG+GGG + Chr5:101686094-101686113 None:intergenic 45.0%
TGTAGGCTGCATGGAAAAAG+AGG + Chr5:101685408-101685427 None:intergenic 45.0%
TTCATTTACCTGCCACCCTT+TGG + Chr5:101685907-101685926 None:intergenic 45.0%
! AAGACTCTGGCTTCAAGAAC+GGG + Chr5:101684337-101684356 None:intergenic 45.0%
! AGACATACAAACAGGCGTTG+AGG - Chr5:101685530-101685549 MsG0580029764.01.T01:intron 45.0%
! AGGTTTTCTCCCATCTTTGG+TGG - Chr5:101685834-101685853 MsG0580029764.01.T01:intron 45.0%
! GCTACTGATTAAGTCTTGGC+GGG + Chr5:101685142-101685161 None:intergenic 45.0%
! GTCCAGGATATGAGTTTGCT+AGG - Chr5:101686136-101686155 MsG0580029764.01.T01:CDS 45.0%
! GTTTGCTAGGGTTGAAACTC+TGG - Chr5:101686149-101686168 MsG0580029764.01.T01:CDS 45.0%
! TGCTTTGTTCCATTTGGAGG+GGG - Chr5:101686102-101686121 MsG0580029764.01.T01:CDS 45.0%
! TTTTCCATGCAGCCTACAGA+AGG - Chr5:101685410-101685429 MsG0580029764.01.T01:CDS 45.0%
! TTTTCCTTCTGTAGGCTGCA+TGG + Chr5:101685417-101685436 None:intergenic 45.0%
!! ACTGTCGGATTAGTCTAGAG+GGG - Chr5:101685586-101685605 MsG0580029764.01.T01:intron 45.0%
!! CAACTGTCGGATTAGTCTAG+AGG - Chr5:101685584-101685603 MsG0580029764.01.T01:intron 45.0%
!! GACATACAAACAGGCGTTGA+GGG - Chr5:101685531-101685550 MsG0580029764.01.T01:intron 45.0%
!! GTCTTCCACCCATTTTTCTG+CGG + Chr5:101684102-101684121 None:intergenic 45.0%
!! ATTAAAATAAAATTAAAACT+TGG + Chr5:101685626-101685645 None:intergenic 5.0%
ATTCTTGCTCCCCCTCCAAA+TGG + Chr5:101686114-101686133 None:intergenic 50.0%
CAACACCGCAGAAAAATGGG+TGG - Chr5:101684094-101684113 MsG0580029764.01.T01:three_prime_UTR 50.0%
CATTATACCCAAAGGGTGGC+AGG - Chr5:101685896-101685915 MsG0580029764.01.T01:intron 50.0%
CCAATGCCAACACCAAGTCA+AGG - Chr5:101686240-101686259 MsG0580029764.01.T01:CDS 50.0%
CGCCAACACCGCAGAAAAAT+GGG - Chr5:101684091-101684110 MsG0580029764.01.T01:three_prime_UTR 50.0%
CTGGTTCATTAGCCAAGAGC+CGG + Chr5:101685284-101685303 None:intergenic 50.0%
GCTATGCTTGTCATGGTTGC+AGG - Chr5:101685222-101685241 MsG0580029764.01.T01:CDS 50.0%
GCTGCGGTTGTAGTGTGTAA+AGG + Chr5:101685034-101685053 None:intergenic 50.0%
GGAATTCCAAGTGAACCTGG+AGG + Chr5:101684032-101684051 None:intergenic 50.0%
TAAAGGAGGCTGTATTGCGG+AGG - Chr5:101685492-101685511 MsG0580029764.01.T01:CDS 50.0%
TGCTAGGGTTGAAACTCTGG+TGG - Chr5:101686152-101686171 MsG0580029764.01.T01:CDS 50.0%
! AGGGACCCTTTTGGATGGTT+TGG + Chr5:101684012-101684031 None:intergenic 50.0%
! GGAGGCACATTCAGATGCAT+TGG - Chr5:101684393-101684412 MsG0580029764.01.T01:CDS 50.0%
!! AGTAGGCCTTGACTTGGTGT+TGG + Chr5:101686249-101686268 None:intergenic 50.0%
!! CACCCATTTTTCTGCGGTGT+TGG + Chr5:101684096-101684115 None:intergenic 50.0%
!! CCTTGACTTGGTGTTGGCAT+TGG + Chr5:101686243-101686262 None:intergenic 50.0%
!! CTACTGTTTGGTCTTGAGCG+TGG - Chr5:101684934-101684953 MsG0580029764.01.T01:intron 50.0%
AATAGGGTGGGGTAGATGCC+AGG + Chr5:101686083-101686102 None:intergenic 55.0%
ACACTACAACCGCAGCCTCA+AGG - Chr5:101685038-101685057 MsG0580029764.01.T01:intron 55.0%
GAGAGAGAGAGAGACGAGCT+AGG - Chr5:101685380-101685399 MsG0580029764.01.T01:CDS 55.0%
GCGCCAACACCGCAGAAAAA+TGG - Chr5:101684090-101684109 MsG0580029764.01.T01:three_prime_UTR 55.0%
GGAAGGGAAACAGCAGCTCA+AGG - Chr5:101684415-101684434 MsG0580029764.01.T01:intron 55.0%
GGATCCTTGCACTCTCCTTG+AGG + Chr5:101685056-101685075 None:intergenic 55.0%
GGGGGAGCAAGAATATGTCC+AGG - Chr5:101686120-101686139 MsG0580029764.01.T01:CDS 55.0%
TTGCACTCTCCTTGAGGCTG+CGG + Chr5:101685050-101685069 None:intergenic 55.0%
! TGAACCTGGAGGGACCCTTT+TGG + Chr5:101684021-101684040 None:intergenic 55.0%
AGGGTCCCTCCAGGTTCACT+TGG - Chr5:101684023-101684042 MsG0580029764.01.T01:three_prime_UTR 60.0%
CCATCCAAAAGGGTCCCTCC+AGG - Chr5:101684014-101684033 MsG0580029764.01.T01:three_prime_UTR 60.0%
GTACAGATATGGGCAGGGGC+CGG - Chr5:101684569-101684588 MsG0580029764.01.T01:CDS 60.0%
TGGCGCGCATAGCACGAAGA+AGG + Chr5:101684076-101684095 None:intergenic 60.0%
! CCTGGAGGGACCCTTTTGGA+TGG + Chr5:101684017-101684036 None:intergenic 60.0%
! GCAGCCTCAAGGAGAGTGCA+AGG - Chr5:101685049-101685068 MsG0580029764.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr5 gene 101683942 101686482 101683942 ID=MsG0580029764.01;Name=MsG0580029764.01
Chr5 mRNA 101683942 101686482 101683942 ID=MsG0580029764.01.T01;Parent=MsG0580029764.01;Name=MsG0580029764.01.T01;_AED=0.31;_eAED=0.31;_QI=0|1|1|1|1|1|4|183|474
Chr5 exon 101683942 101684427 101683942 ID=MsG0580029764.01.T01:exon:26401;Parent=MsG0580029764.01.T01
Chr5 exon 101684507 101684694 101684507 ID=MsG0580029764.01.T01:exon:26400;Parent=MsG0580029764.01.T01
Chr5 exon 101685097 101685535 101685097 ID=MsG0580029764.01.T01:exon:26399;Parent=MsG0580029764.01.T01
Chr5 exon 101685988 101686482 101685988 ID=MsG0580029764.01.T01:exon:26398;Parent=MsG0580029764.01.T01
Chr5 CDS 101685988 101686482 101685988 ID=MsG0580029764.01.T01:cds;Parent=MsG0580029764.01.T01
Chr5 CDS 101685097 101685535 101685097 ID=MsG0580029764.01.T01:cds;Parent=MsG0580029764.01.T01
Chr5 CDS 101684507 101684694 101684507 ID=MsG0580029764.01.T01:cds;Parent=MsG0580029764.01.T01
Chr5 CDS 101684125 101684427 101684125 ID=MsG0580029764.01.T01:cds;Parent=MsG0580029764.01.T01
Chr5 three_prime_UTR 101683942 101684124 101683942 ID=MsG0580029764.01.T01:three_prime_utr;Parent=MsG0580029764.01.T01
Gene Sequence

>MsG0580029764.01.T01

ATGATGGCTAGTGTTCTTCTTGTTGCTCTCCTCTTACTCATTCCAGTTCTCTTTCTGCTAAAAAGAACCAAACCATCCAAAAGGGTCCCTCCAGGTTCACTTGGAATTCCCATTATTGGTCAAAGTCTTGGCCTTCTTCGTGCTATGCGCGCCAACACCGCAGAAAAATGGGTGGAAGACAGAATCAACAAGTATGGTCCTATTTCAAAGCTGAGTTTATTTGGAACACCAACTGTTTTGATTCATGGACAGGCTGCGAATAAGTTTATATTCACCAATCGCGATGAGAATATTGTTAACCAGCAAACACAGTCAATTAAGATGATATTAGGCGACAGGAACTTGCTTGAACTGAGTAGCAAAGATCATAGCAGAGTCAGAGGTGCACTTGTCCCGTTCTTGAAGCCAGAGTCTTTGAAGCAATATGTTGGTAAAATTGATGAAGAAGTTAGGAGGCACATTCAGATGCATTGGGAAGGGAAACAGCAGCTCAAGGTATTGCCCCTAATGAAGACTCTCACTTTCAACATAATTTGTTCTCTACTGTTTGGTCTTGAGCGTGGAAAACAAAGAGATCAATTCATGAATCCATTTCAATCAATAATTAAGGGAATGTGGTCAGTCCCAATTAATGCACCCTTTACACACTACAACCGCAGCCTCAAGGAGAGTGCAAGGATCCAAAACATGTTAAAGGAAATTGTGCACCAGAAGAAAGTTGAATACGAGAAAAATGGCGCCAATTCCCGCCAAGACTTAATCAGTAGCTTGCTTAGTATGGTTGAAGATGGAAAACAAGTTTTAACTGAGAACGAAATTATCCATAATGCTATGCTTGTCATGGTTGCAGGACATGATACATCATCCATTCTAATCACTTTCATTATCCGGCTCTTGGCTAATGAACCAGCTATATGTGCAGCTGTTCTTAAAGAACAGGAAGAGATAGCTAAAGGCAAGCTCTTGGGAGAGACTCTAACATGGGAAGACCTTTCAAAGATGAAGTATACTTGGAGAGTAGCAATGGAAACTCTGAGAAGGTTTTCTCCCATCTTTGGTGGATTCAGAAAAACTACAACAGATATTGAATATGGTGGATACATTATACCCAAAGGGTGGCAGATCTTTTGGGTTACATCAATGACTCACATGGACAACAACATTTTCCCAGAACCTTCACAGTTTGATCCAAGTAGATTTGAAAACCTGGCATCTACCCCACCCTATTGCTTTGTTCCATTTGGAGGGGGAGCAAGAATATGTCCAGGATATGAGTTTGCTAGGGTTGAAACTCTGGTGGCGATTCATTACCTTGTGACCAAATTCAGTTGTAAGCTACTTTCAGACAATTCTTTCAGCAGGGATCCAATGCCAACACCAAGTCAAGGCCTACTGATTGAACTTTGCCCAAGGAAACTATCTTAG

Protein sequence

>MsG0580029764.01.T01

MMASVLLVALLLLIPVLFLLKRTKPSKRVPPGSLGIPIIGQSLGLLRAMRANTAEKWVEDRINKYGPISKLSLFGTPTVLIHGQAANKFIFTNRDENIVNQQTQSIKMILGDRNLLELSSKDHSRVRGALVPFLKPESLKQYVGKIDEEVRRHIQMHWEGKQQLKVLPLMKTLTFNIICSLLFGLERGKQRDQFMNPFQSIIKGMWSVPINAPFTHYNRSLKESARIQNMLKEIVHQKKVEYEKNGANSRQDLISSLLSMVEDGKQVLTENEIIHNAMLVMVAGHDTSSILITFIIRLLANEPAICAAVLKEQEEIAKGKLLGETLTWEDLSKMKYTWRVAMETLRRFSPIFGGFRKTTTDIEYGGYIIPKGWQIFWVTSMTHMDNNIFPEPSQFDPSRFENLASTPPYCFVPFGGGARICPGYEFARVETLVAIHYLVTKFSCKLLSDNSFSRDPMPTPSQGLLIELCPRKLS*