Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043217.01.T01 | RHN65507.1 | 85.039 | 127 | 17 | 1 | 1 | 127 | 645 | 769 | 2.18E-62 | 217 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043217.01.T01 | A0A396IRD3 | 85.039 | 127 | 17 | 1 | 1 | 127 | 645 | 769 | 1.04e-62 | 217 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048134.01 | MsG0880043217.01 | 0.834506 | 2.882431e-56 | 3.427828e-53 |
| MsG0080048745.01 | MsG0880043217.01 | 0.808886 | 2.484635e-50 | 1.437360e-47 |
| MsG0080048889.01 | MsG0880043217.01 | 0.824505 | 7.782890e-54 | 6.907061e-51 |
| MsG0180000287.01 | MsG0880043217.01 | 0.812694 | 3.726792e-51 | 2.385639e-48 |
| MsG0180000367.01 | MsG0880043217.01 | 0.804029 | 2.628382e-49 | 1.341053e-46 |
| MsG0180000551.01 | MsG0880043217.01 | 0.805276 | 1.443393e-49 | 7.604366e-47 |
| MsG0180000985.01 | MsG0880043217.01 | 0.801463 | 8.898111e-49 | 4.252081e-46 |
| MsG0180001029.01 | MsG0880043217.01 | 0.801532 | 8.613049e-49 | 4.123054e-46 |
| MsG0180001513.01 | MsG0880043217.01 | 0.810650 | 1.037298e-50 | 6.288246e-48 |
| MsG0180001800.01 | MsG0880043217.01 | 0.806418 | 8.305030e-50 | 4.505375e-47 |
| MsG0180003320.01 | MsG0880043217.01 | 0.821118 | 4.784233e-53 | 3.857896e-50 |
| MsG0180003375.01 | MsG0880043217.01 | 0.818812 | 1.611950e-52 | 1.219103e-49 |
| MsG0180003405.01 | MsG0880043217.01 | -0.809180 | 2.149540e-50 | 1.253420e-47 |
| MsG0180003484.01 | MsG0880043217.01 | 0.808951 | 2.406014e-50 | 1.394317e-47 |
| MsG0180003849.01 | MsG0880043217.01 | 0.830325 | 3.128754e-55 | 3.285622e-52 |
| MsG0180004232.01 | MsG0880043217.01 | 0.829534 | 4.879111e-55 | 5.007433e-52 |
| MsG0180004359.01 | MsG0880043217.01 | 0.828359 | 9.392753e-55 | 9.314336e-52 |
| MsG0180005281.01 | MsG0880043217.01 | 0.803858 | 2.851843e-49 | 1.448715e-46 |
| MsG0180005353.01 | MsG0880043217.01 | 0.805283 | 1.438510e-49 | 7.579999e-47 |
| MsG0180005681.01 | MsG0880043217.01 | 0.800742 | 1.249426e-48 | 5.862681e-46 |
| MsG0280006381.01 | MsG0880043217.01 | -0.803602 | 3.222896e-49 | 1.626480e-46 |
| MsG0780040497.01 | MsG0880043217.01 | 0.815300 | 9.919528e-52 | 6.813082e-49 |
| MsG0780040498.01 | MsG0880043217.01 | 0.857445 | 1.624612e-62 | 4.010706e-59 |
| MsG0780040716.01 | MsG0880043217.01 | 0.811819 | 5.783898e-51 | 3.616489e-48 |
| MsG0780040784.01 | MsG0880043217.01 | 0.833767 | 4.414716e-56 | 5.134582e-53 |
| MsG0780040977.01 | MsG0880043217.01 | 0.804680 | 1.923227e-49 | 9.978439e-47 |
| MsG0780041036.01 | MsG0880043217.01 | 0.832208 | 1.077548e-55 | 1.196173e-52 |
| MsG0780041180.01 | MsG0880043217.01 | 0.808383 | 3.182480e-50 | 1.817103e-47 |
| MsG0780041316.01 | MsG0880043217.01 | 0.815159 | 1.066181e-51 | 7.294372e-49 |
| MsG0780041691.01 | MsG0880043217.01 | -0.800186 | 1.621739e-48 | 7.503074e-46 |
| MsG0880042122.01 | MsG0880043217.01 | 0.829161 | 6.009926e-55 | 6.101403e-52 |
| MsG0880043212.01 | MsG0880043217.01 | 0.884691 | 1.545201e-71 | 1.029479e-67 |
| MsG0880043217.01 | MsG0880043906.01 | 0.824395 | 8.262791e-54 | 7.309237e-51 |
| MsG0880043217.01 | MsG0880045369.01 | -0.804474 | 2.122801e-49 | 1.095517e-46 |
| MsG0880043217.01 | MsG0880045854.01 | 0.830818 | 2.370221e-55 | 2.525293e-52 |
| MsG0880043217.01 | MsG0880045968.01 | -0.810341 | 1.209779e-50 | 7.273501e-48 |
| MsG0880043217.01 | MsG0880046271.01 | 0.857986 | 1.123092e-62 | 2.823418e-59 |
| MsG0880043217.01 | MsG0880046273.01 | 0.810748 | 9.877653e-51 | 6.003741e-48 |
| MsG0880043217.01 | MsG0880046870.01 | 0.804491 | 2.105893e-49 | 1.087256e-46 |
| MsG0880043217.01 | MsG0880046932.01 | 0.814513 | 1.482754e-51 | 9.969851e-49 |
| MsG0880043217.01 | MsG0880047383.01 | 0.831443 | 1.664777e-55 | 1.806863e-52 |
| MsG0880043217.01 | MsG0880047714.01 | 0.813175 | 2.924323e-51 | 1.895913e-48 |
| MsG0280010936.01 | MsG0880043217.01 | 0.829104 | 6.203027e-55 | 6.286525e-52 |
| MsG0280011236.01 | MsG0880043217.01 | 0.827995 | 1.149519e-54 | 1.127957e-51 |
| MsG0280011267.01 | MsG0880043217.01 | 0.855337 | 6.749185e-62 | 1.553175e-58 |
| MsG0280011269.01 | MsG0880043217.01 | 0.824295 | 8.723234e-54 | 7.694466e-51 |
| MsG0380011635.01 | MsG0880043217.01 | 0.813587 | 2.373463e-51 | 1.556255e-48 |
| MsG0380011701.01 | MsG0880043217.01 | 0.804910 | 1.722007e-49 | 8.988384e-47 |
| MsG0380011968.01 | MsG0880043217.01 | 0.846728 | 1.809905e-59 | 3.144748e-56 |
| MsG0380011974.01 | MsG0880043217.01 | 0.831655 | 1.475855e-55 | 1.611923e-52 |
| MsG0380012148.01 | MsG0880043217.01 | -0.806120 | 9.595960e-50 | 5.166469e-47 |
| MsG0380012889.01 | MsG0880043217.01 | 0.837800 | 4.196348e-57 | 5.512558e-54 |
| MsG0380013285.01 | MsG0880043217.01 | 0.805616 | 1.224667e-49 | 6.508821e-47 |
| MsG0380014342.01 | MsG0880043217.01 | 0.809339 | 1.986713e-50 | 1.163408e-47 |
| MsG0380014344.01 | MsG0880043217.01 | 0.834793 | 2.439989e-56 | 2.926220e-53 |
| MsG0380014639.01 | MsG0880043217.01 | -0.824680 | 7.079767e-54 | 6.315641e-51 |
| MsG0380014642.01 | MsG0880043217.01 | -0.822172 | 2.730234e-53 | 2.267809e-50 |
| MsG0380014735.01 | MsG0880043217.01 | -0.814873 | 1.234064e-51 | 8.377796e-49 |
| MsG0680030960.01 | MsG0880043217.01 | 0.808628 | 2.821294e-50 | 1.621065e-47 |
| MsG0680031200.01 | MsG0880043217.01 | 0.803449 | 3.468235e-49 | 1.743347e-46 |
| MsG0680033014.01 | MsG0880043217.01 | 0.800088 | 1.698153e-48 | 7.837159e-46 |
| MsG0680033015.01 | MsG0880043217.01 | 0.802443 | 5.595605e-49 | 2.741420e-46 |
| MsG0680033347.01 | MsG0880043217.01 | 0.811927 | 5.479402e-51 | 3.435849e-48 |
| MsG0680034238.01 | MsG0880043217.01 | 0.812168 | 4.856790e-51 | 3.065599e-48 |
| MsG0680034348.01 | MsG0880043217.01 | 0.809238 | 2.088687e-50 | 1.219871e-47 |
| MsG0680034354.01 | MsG0880043217.01 | 0.817883 | 2.617741e-52 | 1.929744e-49 |
| MsG0680034356.01 | MsG0880043217.01 | 0.826353 | 2.842813e-54 | 2.659641e-51 |
| MsG0680034366.01 | MsG0880043217.01 | 0.812589 | 3.928589e-51 | 2.507871e-48 |
| MsG0680034418.01 | MsG0880043217.01 | 0.802092 | 6.609691e-49 | 3.209350e-46 |
| MsG0680034728.01 | MsG0880043217.01 | 0.807498 | 4.907753e-50 | 2.737941e-47 |
| MsG0680034974.01 | MsG0880043217.01 | 0.826333 | 2.873589e-54 | 2.686843e-51 |
| MsG0680034978.01 | MsG0880043217.01 | 0.825560 | 4.386753e-54 | 4.012178e-51 |
| MsG0680035584.01 | MsG0880043217.01 | -0.830037 | 3.678802e-55 | 3.831125e-52 |
| MsG0480019146.01 | MsG0880043217.01 | 0.843223 | 1.598974e-58 | 2.484654e-55 |
| MsG0480019301.01 | MsG0880043217.01 | 0.818011 | 2.447992e-52 | 1.810972e-49 |
| MsG0480019348.01 | MsG0880043217.01 | 0.800269 | 1.560391e-48 | 7.234479e-46 |
| MsG0480019666.01 | MsG0880043217.01 | 0.821227 | 4.516884e-53 | 3.653380e-50 |
| MsG0480019842.01 | MsG0880043217.01 | 0.813106 | 3.028113e-51 | 1.959529e-48 |
| MsG0480020539.01 | MsG0880043217.01 | 0.802816 | 4.687844e-49 | 2.318711e-46 |
| MsG0480020904.01 | MsG0880043217.01 | 0.856599 | 2.884902e-62 | 6.922871e-59 |
| MsG0480021129.01 | MsG0880043217.01 | 0.807065 | 6.063651e-50 | 3.344703e-47 |
| MsG0480021133.01 | MsG0880043217.01 | 0.832339 | 1.000220e-55 | 1.114572e-52 |
| MsG0480021360.01 | MsG0880043217.01 | 0.876141 | 1.768213e-68 | 8.478546e-65 |
| MsG0480021361.01 | MsG0880043217.01 | 0.812017 | 5.238185e-51 | 3.292752e-48 |
| MsG0480021573.01 | MsG0880043217.01 | 0.854707 | 1.028546e-61 | 2.317639e-58 |
| MsG0480022055.01 | MsG0880043217.01 | 0.826793 | 2.231730e-54 | 2.114281e-51 |
| MsG0480022241.01 | MsG0880043217.01 | -0.803370 | 3.600973e-49 | 1.806347e-46 |
| MsG0480022428.01 | MsG0880043217.01 | 0.818055 | 2.392710e-52 | 1.772183e-49 |
| MsG0480022833.01 | MsG0880043217.01 | 0.804166 | 2.461159e-49 | 1.260128e-46 |
| MsG0480022840.01 | MsG0880043217.01 | 0.816000 | 6.926955e-52 | 4.849968e-49 |
| MsG0480023152.01 | MsG0880043217.01 | -0.809127 | 2.206557e-50 | 1.284850e-47 |
| MsG0480023244.01 | MsG0880043217.01 | -0.821364 | 4.198393e-53 | 3.408549e-50 |
| MsG0480023431.01 | MsG0880043217.01 | 0.800897 | 1.161697e-48 | 5.472805e-46 |
| MsG0480023432.01 | MsG0880043217.01 | 0.828764 | 7.498192e-55 | 7.523207e-52 |
| MsG0580024087.01 | MsG0880043217.01 | 0.833504 | 5.133285e-56 | 5.923211e-53 |
| MsG0580024218.01 | MsG0880043217.01 | 0.809977 | 1.449380e-50 | 8.631858e-48 |
| MsG0580024219.01 | MsG0880043217.01 | 0.804552 | 2.045363e-49 | 1.057670e-46 |
| MsG0580024220.01 | MsG0880043217.01 | 0.801698 | 7.963269e-49 | 3.827900e-46 |
| MsG0580024768.01 | MsG0880043217.01 | -0.801693 | 7.983190e-49 | 3.836960e-46 |
| MsG0580024932.01 | MsG0880043217.01 | 0.810646 | 1.039272e-50 | 6.299545e-48 |
| MsG0580025023.01 | MsG0880043217.01 | 0.805970 | 1.032229e-49 | 5.536329e-47 |
| MsG0580025431.01 | MsG0880043217.01 | 0.800160 | 1.641735e-48 | 7.590275e-46 |
| MsG0580025432.01 | MsG0880043217.01 | 0.804545 | 2.051707e-49 | 1.060761e-46 |
| MsG0580025524.01 | MsG0880043217.01 | 0.820870 | 5.457859e-53 | 4.370901e-50 |
| MsG0580025550.01 | MsG0880043217.01 | 0.821254 | 4.452299e-53 | 3.603552e-50 |
| MsG0580025552.01 | MsG0880043217.01 | 0.811898 | 5.561075e-51 | 3.484379e-48 |
| MsG0580025586.01 | MsG0880043217.01 | 0.804906 | 1.725401e-49 | 9.005138e-47 |
| MsG0580025590.01 | MsG0880043217.01 | 0.847656 | 1.007285e-59 | 1.802996e-56 |
| MsG0580025961.01 | MsG0880043217.01 | 0.855647 | 5.481860e-62 | 1.274445e-58 |
| MsG0580026019.01 | MsG0880043217.01 | 0.800833 | 1.197267e-48 | 5.630950e-46 |
| MsG0380015323.01 | MsG0880043217.01 | 0.837014 | 6.671505e-57 | 8.554913e-54 |
| MsG0380015659.01 | MsG0880043217.01 | 0.825301 | 5.051564e-54 | 4.586522e-51 |
| MsG0380015660.01 | MsG0880043217.01 | 0.823544 | 1.308434e-53 | 1.129927e-50 |
| MsG0380015711.01 | MsG0880043217.01 | 0.832653 | 8.361476e-56 | 9.406211e-53 |
| MsG0380016299.01 | MsG0880043217.01 | 0.858502 | 7.882387e-63 | 2.015990e-59 |
| MsG0380016300.01 | MsG0880043217.01 | 0.863331 | 2.686424e-64 | 8.114637e-61 |
| MsG0380016301.01 | MsG0880043217.01 | 0.812889 | 3.377843e-51 | 2.173364e-48 |
| MsG0380016476.01 | MsG0880043217.01 | 0.842336 | 2.752304e-58 | 4.159858e-55 |
| MsG0380016718.01 | MsG0880043217.01 | -0.815232 | 1.027343e-51 | 7.042795e-49 |
| MsG0380017030.01 | MsG0880043217.01 | 0.805253 | 1.459309e-49 | 7.683662e-47 |
| MsG0380017405.01 | MsG0880043217.01 | -0.800018 | 1.754765e-48 | 8.083903e-46 |
| MsG0380017565.01 | MsG0880043217.01 | 0.821249 | 4.464721e-53 | 3.613102e-50 |
| MsG0380017901.01 | MsG0880043217.01 | 0.837352 | 5.467756e-57 | 7.083068e-54 |
| MsG0480018433.01 | MsG0880043217.01 | 0.802277 | 6.055568e-49 | 2.954212e-46 |
| MsG0580026148.01 | MsG0880043217.01 | 0.822395 | 2.423881e-53 | 2.026476e-50 |
| MsG0580026521.01 | MsG0880043217.01 | 0.821007 | 5.074253e-53 | 4.079572e-50 |
| MsG0580027276.01 | MsG0880043217.01 | -0.806093 | 9.724290e-50 | 5.231943e-47 |
| MsG0580027751.01 | MsG0880043217.01 | 0.810777 | 9.738419e-51 | 5.923716e-48 |
| MsG0580027752.01 | MsG0880043217.01 | 0.825797 | 3.854431e-54 | 3.549516e-51 |
| MsG0580028041.01 | MsG0880043217.01 | 0.815506 | 8.929033e-52 | 6.167802e-49 |
| MsG0580029240.01 | MsG0880043217.01 | 0.813542 | 2.428558e-51 | 1.590471e-48 |
| MsG0580029359.01 | MsG0880043217.01 | 0.826228 | 3.043925e-54 | 2.837660e-51 |
| MsG0580029445.01 | MsG0880043217.01 | 0.825187 | 5.373923e-54 | 4.863741e-51 |
| MsG0580029676.01 | MsG0880043217.01 | 0.815266 | 1.009376e-51 | 6.926387e-49 |
| MsG0580029764.01 | MsG0880043217.01 | 0.823273 | 1.513996e-53 | 1.297500e-50 |
| MsG0580029937.01 | MsG0880043217.01 | 0.820527 | 6.544722e-53 | 5.191052e-50 |
| MsG0580030135.01 | MsG0880043217.01 | 0.803293 | 3.735632e-49 | 1.870219e-46 |
| MsG0280006546.01 | MsG0880043217.01 | 0.821464 | 3.982289e-53 | 3.242057e-50 |
| MsG0280006575.01 | MsG0880043217.01 | 0.813367 | 2.653531e-51 | 1.729571e-48 |
| MsG0280007405.01 | MsG0880043217.01 | 0.800319 | 1.523716e-48 | 7.073664e-46 |
| MsG0280007678.01 | MsG0880043217.01 | 0.830101 | 3.550600e-55 | 3.704410e-52 |
| MsG0280009232.01 | MsG0880043217.01 | 0.804388 | 2.212456e-49 | 1.139270e-46 |
| MsG0280009253.01 | MsG0880043217.01 | 0.805066 | 1.597043e-49 | 8.369022e-47 |
| MsG0280009742.01 | MsG0880043217.01 | -0.806859 | 6.702523e-50 | 3.677593e-47 |
| MsG0280010455.01 | MsG0880043217.01 | -0.811402 | 7.128513e-51 | 4.408569e-48 |
| MsG0280010539.01 | MsG0880043217.01 | 0.801085 | 1.063267e-48 | 5.033077e-46 |
| MsG0780036054.01 | MsG0880043217.01 | 0.803317 | 3.693779e-49 | 1.850367e-46 |
| MsG0780036208.01 | MsG0880043217.01 | 0.822005 | 2.986005e-53 | 2.468493e-50 |
| MsG0780036378.01 | MsG0880043217.01 | 0.808935 | 2.425689e-50 | 1.405090e-47 |
| MsG0780036427.01 | MsG0880043217.01 | 0.802715 | 4.918763e-49 | 2.426593e-46 |
| MsG0780036472.01 | MsG0880043217.01 | 0.834444 | 2.987195e-56 | 3.545679e-53 |
| MsG0780036649.01 | MsG0880043217.01 | 0.857826 | 1.252662e-62 | 3.132149e-59 |
| MsG0780036839.01 | MsG0880043217.01 | 0.850641 | 1.489374e-60 | 2.936885e-57 |
| MsG0780038305.01 | MsG0880043217.01 | 0.828742 | 7.589427e-55 | 7.609928e-52 |
| MsG0780038519.01 | MsG0880043217.01 | 0.834102 | 3.638727e-56 | 4.274858e-53 |
| MsG0780038914.01 | MsG0880043217.01 | 0.813370 | 2.648984e-51 | 1.726778e-48 |
| MsG0780039237.01 | MsG0880043217.01 | 0.851425 | 8.948968e-61 | 1.810733e-57 |
| MsG0780039287.01 | MsG0880043217.01 | -0.814439 | 1.539861e-51 | 1.033284e-48 |
| MsG0780039431.01 | MsG0880043217.01 | 0.809400 | 1.928163e-50 | 1.130964e-47 |
| MsG0780039619.01 | MsG0880043217.01 | 0.809996 | 1.435456e-50 | 8.553623e-48 |
| MsG0780039855.01 | MsG0880043217.01 | 0.826818 | 2.201560e-54 | 2.087211e-51 |
| MsG0780039979.01 | MsG0880043217.01 | 0.837476 | 5.082461e-57 | 6.610148e-54 |
| MsG0780040034.01 | MsG0880043217.01 | 0.817375 | 3.406751e-52 | 2.476799e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043217.01.T01 | MTR_3g011280 | 85.039 | 127 | 17 | 1 | 1 | 127 | 690 | 814 | 3.39e-66 | 217 |
| MsG0880043217.01.T01 | MTR_3g011280 | 85.039 | 127 | 17 | 1 | 1 | 127 | 658 | 782 | 4.63e-66 | 216 |
| MsG0880043217.01.T01 | MTR_3g011390 | 80.952 | 126 | 22 | 1 | 1 | 126 | 692 | 815 | 7.32e-63 | 207 |
| MsG0880043217.01.T01 | MTR_3g011420 | 80.315 | 127 | 23 | 1 | 1 | 127 | 691 | 815 | 6.16e-61 | 202 |
| MsG0880043217.01.T01 | MTR_3g011270 | 70.339 | 118 | 35 | 0 | 1 | 118 | 689 | 806 | 1.67e-51 | 176 |
| MsG0880043217.01.T01 | MTR_0691s0020 | 68.644 | 118 | 37 | 0 | 1 | 118 | 690 | 807 | 2.34e-50 | 172 |
| MsG0880043217.01.T01 | MTR_3g011370 | 69.492 | 118 | 36 | 0 | 1 | 118 | 690 | 807 | 2.34e-50 | 172 |
| MsG0880043217.01.T01 | MTR_3g011480 | 77.119 | 118 | 27 | 0 | 1 | 118 | 689 | 806 | 3.47e-50 | 172 |
| MsG0880043217.01.T01 | MTR_3g019340 | 66.667 | 117 | 39 | 0 | 1 | 117 | 644 | 760 | 2.89e-49 | 169 |
| MsG0880043217.01.T01 | MTR_3g011460 | 68.644 | 118 | 37 | 0 | 1 | 118 | 689 | 806 | 4.90e-48 | 166 |
| MsG0880043217.01.T01 | MTR_3g011360 | 64.567 | 127 | 43 | 1 | 1 | 127 | 658 | 782 | 3.73e-47 | 163 |
| MsG0880043217.01.T01 | MTR_3g012310 | 57.031 | 128 | 53 | 1 | 3 | 130 | 691 | 816 | 8.06e-43 | 151 |
| MsG0880043217.01.T01 | MTR_1g031720 | 52.000 | 150 | 65 | 3 | 1 | 149 | 814 | 957 | 1.51e-37 | 136 |
| MsG0880043217.01.T01 | MTR_3g012060 | 53.043 | 115 | 54 | 0 | 3 | 117 | 687 | 801 | 4.74e-37 | 134 |
| MsG0880043217.01.T01 | MTR_3g011300 | 63.780 | 127 | 44 | 1 | 1 | 127 | 687 | 811 | 6.65e-37 | 134 |
| MsG0880043217.01.T01 | MTR_3g012090 | 56.410 | 117 | 51 | 0 | 1 | 117 | 688 | 804 | 1.13e-36 | 134 |
| MsG0880043217.01.T01 | MTR_3g012240 | 52.344 | 128 | 59 | 1 | 3 | 130 | 737 | 862 | 1.22e-35 | 130 |
| MsG0880043217.01.T01 | MTR_3g012250 | 50.388 | 129 | 61 | 2 | 3 | 130 | 696 | 822 | 2.54e-34 | 127 |
| MsG0880043217.01.T01 | MTR_1g016217 | 52.308 | 130 | 60 | 1 | 1 | 130 | 1 | 128 | 1.59e-32 | 116 |
| MsG0880043217.01.T01 | MTR_3g012050 | 51.562 | 128 | 60 | 1 | 3 | 130 | 675 | 800 | 8.09e-32 | 120 |
| MsG0880043217.01.T01 | MTR_1g016210 | 52.308 | 130 | 60 | 1 | 1 | 130 | 691 | 818 | 1.03e-30 | 116 |
| MsG0880043217.01.T01 | MTR_3g056585 | 51.639 | 122 | 55 | 2 | 1 | 118 | 668 | 789 | 2.30e-28 | 110 |
| MsG0880043217.01.T01 | MTR_3g013700 | 32.836 | 201 | 68 | 2 | 3 | 156 | 475 | 655 | 1.49e-26 | 104 |
| MsG0880043217.01.T01 | MTR_3g012080 | 48.113 | 106 | 53 | 1 | 25 | 130 | 1 | 104 | 2.84e-26 | 99.8 |
| MsG0880043217.01.T01 | MTR_5g027860 | 42.038 | 157 | 82 | 4 | 1 | 151 | 671 | 824 | 4.03e-26 | 103 |
| MsG0880043217.01.T01 | MTR_3g456080 | 43.750 | 144 | 72 | 3 | 1 | 141 | 108 | 245 | 5.73e-26 | 100 |
| MsG0880043217.01.T01 | MTR_3g056590 | 41.667 | 156 | 76 | 3 | 1 | 147 | 689 | 838 | 1.28e-24 | 99.4 |
| MsG0880043217.01.T01 | MTR_5g027810 | 44.068 | 118 | 65 | 1 | 1 | 117 | 676 | 793 | 1.33e-24 | 99.4 |
| MsG0880043217.01.T01 | MTR_3g055930 | 43.750 | 128 | 69 | 2 | 1 | 127 | 700 | 825 | 1.75e-24 | 99.0 |
| MsG0880043217.01.T01 | MTR_3g012080 | 47.059 | 102 | 52 | 1 | 29 | 130 | 2 | 101 | 2.79e-24 | 94.4 |
| MsG0880043217.01.T01 | MTR_1g078150 | 41.722 | 151 | 78 | 4 | 1 | 147 | 480 | 624 | 5.61e-24 | 97.4 |
| MsG0880043217.01.T01 | MTR_5g027900 | 44.068 | 118 | 65 | 1 | 1 | 117 | 673 | 790 | 7.81e-24 | 97.1 |
| MsG0880043217.01.T01 | MTR_3g012270 | 51.685 | 89 | 41 | 1 | 1 | 87 | 693 | 781 | 1.30e-23 | 96.3 |
| MsG0880043217.01.T01 | MTR_1g078190 | 42.105 | 152 | 77 | 5 | 1 | 147 | 689 | 834 | 3.10e-22 | 92.4 |
| MsG0880043217.01.T01 | MTR_3g069210 | 45.455 | 121 | 63 | 2 | 1 | 118 | 667 | 787 | 4.13e-22 | 92.0 |
| MsG0880043217.01.T01 | MTR_3g056625 | 40.164 | 122 | 69 | 1 | 1 | 118 | 366 | 487 | 6.28e-22 | 91.7 |
| MsG0880043217.01.T01 | MTR_5g027910 | 43.966 | 116 | 64 | 1 | 3 | 117 | 678 | 793 | 1.10e-21 | 90.9 |
| MsG0880043217.01.T01 | MTR_5g027870 | 44.828 | 116 | 63 | 1 | 3 | 117 | 676 | 791 | 1.39e-21 | 90.5 |
| MsG0880043217.01.T01 | MTR_1g078170 | 44.144 | 111 | 58 | 1 | 1 | 107 | 188 | 298 | 3.47e-21 | 89.4 |
| MsG0880043217.01.T01 | MTR_3g056360 | 42.308 | 130 | 70 | 2 | 1 | 127 | 650 | 777 | 4.86e-20 | 86.3 |
| MsG0880043217.01.T01 | MTR_3g056410 | 42.308 | 130 | 70 | 2 | 1 | 127 | 641 | 768 | 5.29e-20 | 86.3 |
| MsG0880043217.01.T01 | MTR_5g092950 | 44.262 | 122 | 64 | 2 | 1 | 118 | 237 | 358 | 1.18e-19 | 84.7 |
| MsG0880043217.01.T01 | MTR_3g056620 | 42.342 | 111 | 62 | 1 | 17 | 127 | 722 | 830 | 1.96e-19 | 84.3 |
| MsG0880043217.01.T01 | MTR_1g011990 | 42.623 | 122 | 65 | 2 | 1 | 118 | 607 | 727 | 1.43e-18 | 82.0 |
| MsG0880043217.01.T01 | MTR_5g074530 | 57.812 | 64 | 26 | 1 | 16 | 79 | 51 | 113 | 2.73e-18 | 75.9 |
| MsG0880043217.01.T01 | MTR_3g056200 | 40.310 | 129 | 69 | 2 | 1 | 121 | 678 | 806 | 5.11e-18 | 80.5 |
| MsG0880043217.01.T01 | MTR_3g056320 | 39.370 | 127 | 69 | 2 | 1 | 119 | 683 | 809 | 2.46e-17 | 78.6 |
| MsG0880043217.01.T01 | MTR_3g055740 | 38.333 | 120 | 72 | 2 | 1 | 118 | 615 | 734 | 1.66e-15 | 73.2 |
| MsG0880043217.01.T01 | MTR_3g055830 | 37.815 | 119 | 73 | 1 | 1 | 118 | 671 | 789 | 2.11e-15 | 72.8 |
| MsG0880043217.01.T01 | MTR_3g455940 | 37.815 | 119 | 73 | 1 | 1 | 118 | 528 | 646 | 2.33e-15 | 72.8 |
| MsG0880043217.01.T01 | MTR_3g056310 | 38.281 | 128 | 72 | 1 | 1 | 121 | 680 | 807 | 5.39e-15 | 71.6 |
| MsG0880043217.01.T01 | MTR_3g056380 | 38.281 | 128 | 69 | 2 | 1 | 121 | 676 | 800 | 7.13e-15 | 71.2 |
| MsG0880043217.01.T01 | MTR_3g055720 | 36.667 | 120 | 72 | 2 | 1 | 118 | 674 | 791 | 1.14e-14 | 70.9 |
| MsG0880043217.01.T01 | MTR_3g056190 | 36.090 | 133 | 73 | 3 | 1 | 121 | 688 | 820 | 1.24e-14 | 70.9 |
| MsG0880043217.01.T01 | MTR_3g456030 | 35.294 | 119 | 76 | 1 | 1 | 118 | 673 | 791 | 5.07e-13 | 66.2 |
| MsG0880043217.01.T01 | MTR_3g456070 | 33.613 | 119 | 78 | 1 | 1 | 118 | 517 | 635 | 2.36e-12 | 63.9 |
| MsG0880043217.01.T01 | MTR_3g455910 | 33.613 | 119 | 78 | 1 | 1 | 118 | 597 | 715 | 5.01e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 34 sgRNAs with CRISPR-Local
Find 56 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTTAAGGACGTTAGGTTTA+AGG | 0.196607 | 8:-20803005 | MsG0880043217.01.T01:CDS |
| TCAACAAGATACTCAAGTTT+TGG | 0.284159 | 8:+20802799 | None:intergenic |
| CTGAGGGTACCTCCTTCAGC+TGG | 0.335878 | 8:+20802537 | None:intergenic |
| CAATTGAAGCCGCTGAAGTT+GGG | 0.346403 | 8:+20802855 | None:intergenic |
| TATTATGTTGAGGTAAATCA+TGG | 0.391171 | 8:-20803066 | MsG0880043217.01.T01:CDS |
| TTCTACTACAACAGCACTTA+AGG | 0.404293 | 8:+20802957 | None:intergenic |
| AATACTTTCAACAAATCTTC+TGG | 0.408565 | 8:+20802467 | None:intergenic |
| TGAGGGTACCTCCTTCAGCT+GGG | 0.431137 | 8:+20802538 | None:intergenic |
| AACTAGATATATTGCCTGAA+TGG | 0.436563 | 8:-20802825 | MsG0880043217.01.T01:CDS |
| TCAATTGAAGCCGCTGAAGT+TGG | 0.442838 | 8:+20802854 | None:intergenic |
| TGAAAATGTTAAGTCAGTTA+AGG | 0.443456 | 8:-20803020 | MsG0880043217.01.T01:CDS |
| GATCTGAATATCACTACAAT+TGG | 0.446557 | 8:-20802919 | MsG0880043217.01.T01:CDS |
| ACCCTCAGGCATCAGGTCCT+TGG | 0.453611 | 8:-20802522 | MsG0880043217.01.T01:CDS |
| TTAAGTCAGTTAAGGACGTT+AGG | 0.458090 | 8:-20803012 | MsG0880043217.01.T01:CDS |
| AGGAGGTACCCTCAGGCATC+AGG | 0.476710 | 8:-20802529 | MsG0880043217.01.T01:CDS |
| CAGCTGAAGGAGGTACCCTC+AGG | 0.492598 | 8:-20802536 | MsG0880043217.01.T01:CDS |
| GAGGGTACCTCCTTCAGCTG+GGG | 0.518269 | 8:+20802539 | None:intergenic |
| TAGTGATATTCAGATCTTCA+AGG | 0.533215 | 8:+20802926 | None:intergenic |
| GATAACTTTGAGATTATCCA+AGG | 0.542505 | 8:+20802505 | None:intergenic |
| AGGGTACCTCCTTCAGCTGG+GGG | 0.546435 | 8:+20802540 | None:intergenic |
| CTTCAGCGGCTTCAATTGAA+AGG | 0.549966 | 8:-20802850 | MsG0880043217.01.T01:CDS |
| ATTATGTTGAGGTAAATCAT+GGG | 0.551874 | 8:-20803065 | MsG0880043217.01.T01:CDS |
| AATTGAAGCCGCTGAAGTTG+GGG | 0.554713 | 8:+20802856 | None:intergenic |
| GAAAGTATTGATCCAGACAA+AGG | 0.596444 | 8:-20802453 | MsG0880043217.01.T01:CDS |
| TTATGTTGAGGTAAATCATG+GGG | 0.597922 | 8:-20803064 | MsG0880043217.01.T01:CDS |
| CATCTCCACCCCAACTTCAG+CGG | 0.598929 | 8:-20802864 | MsG0880043217.01.T01:CDS |
| AGGCATGTCAGAAGAGAACA+TGG | 0.599895 | 8:-20802985 | MsG0880043217.01.T01:CDS |
| TGAAGCCGCTGAAGTTGGGG+TGG | 0.611493 | 8:+20802859 | None:intergenic |
| TCCAAGGACCTGATGCCTGA+GGG | 0.617728 | 8:+20802521 | None:intergenic |
| ATCCAAGGACCTGATGCCTG+AGG | 0.631925 | 8:+20802520 | None:intergenic |
| GAATATCACTACAATTGGTG+AGG | 0.635087 | 8:-20802914 | MsG0880043217.01.T01:CDS |
| GCATGTCAGAAGAGAACATG+GGG | 0.672397 | 8:-20802983 | MsG0880043217.01.T01:CDS |
| TATGTTGAGGTAAATCATGG+GGG | 0.674072 | 8:-20803063 | MsG0880043217.01.T01:CDS |
| GGCATGTCAGAAGAGAACAT+GGG | 0.704208 | 8:-20802984 | MsG0880043217.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AACATAATAAAGTTTTTGTA+GGG | + | Chr8:20802449-20802468 | None:intergenic | 15.0% |
| !! | ACAAAAACTTTATTATGTTG+AGG | - | Chr8:20802450-20802469 | MsG0880043217.01.T01:CDS | 20.0% |
| !!! | CAACATAATAAAGTTTTTGT+AGG | + | Chr8:20802450-20802469 | None:intergenic | 20.0% |
| !!! | GAAATTTTGCATTTTCAAAT+TGG | - | Chr8:20802853-20802872 | MsG0880043217.01.T01:CDS | 20.0% |
| !!! | TGAGAAAAAATTCAAGTTAA+TGG | + | Chr8:20802644-20802663 | None:intergenic | 20.0% |
| ! | AATACTTTCAACAAATCTTC+TGG | + | Chr8:20803062-20803081 | None:intergenic | 25.0% |
| ! | ATTATGTTGAGGTAAATCAT+GGG | - | Chr8:20802461-20802480 | MsG0880043217.01.T01:CDS | 25.0% |
| ! | TATTATGTTGAGGTAAATCA+TGG | - | Chr8:20802460-20802479 | MsG0880043217.01.T01:CDS | 25.0% |
| ! | TGAAAATGTTAAGTCAGTTA+AGG | - | Chr8:20802506-20802525 | MsG0880043217.01.T01:CDS | 25.0% |
| !! | ATTTTGCATTTTCAAATTGG+AGG | - | Chr8:20802856-20802875 | MsG0880043217.01.T01:CDS | 25.0% |
| AACTAGATATATTGCCTGAA+TGG | - | Chr8:20802701-20802720 | MsG0880043217.01.T01:intron | 30.0% | |
| AGATCGAAATTCAACAGATT+TGG | + | Chr8:20802810-20802829 | None:intergenic | 30.0% | |
| ATCAAAGTTCATCGTCTATA+AGG | + | Chr8:20802936-20802955 | None:intergenic | 30.0% | |
| ATCTGTTGAATTTCGATCTA+TGG | - | Chr8:20802811-20802830 | MsG0880043217.01.T01:CDS | 30.0% | |
| ATGCAAAATTTCACCATCAT+AGG | + | Chr8:20802845-20802864 | None:intergenic | 30.0% | |
| GATCTGAATATCACTACAAT+TGG | - | Chr8:20802607-20802626 | MsG0880043217.01.T01:intron | 30.0% | |
| TAGTGATATTCAGATCTTCA+AGG | + | Chr8:20802603-20802622 | None:intergenic | 30.0% | |
| TCTGTTGAATTTCGATCTAT+GGG | - | Chr8:20802812-20802831 | MsG0880043217.01.T01:CDS | 30.0% | |
| TTATGTTGAGGTAAATCATG+GGG | - | Chr8:20802462-20802481 | MsG0880043217.01.T01:CDS | 30.0% | |
| ! | TCAACAAGATACTCAAGTTT+TGG | + | Chr8:20802730-20802749 | None:intergenic | 30.0% |
| !! | GATAACTTTGAGATTATCCA+AGG | + | Chr8:20803024-20803043 | None:intergenic | 30.0% |
| AGTTAAGGACGTTAGGTTTA+AGG | - | Chr8:20802521-20802540 | MsG0880043217.01.T01:CDS | 35.0% | |
| CTCTCTTGAATATCTTACCA+TGG | - | Chr8:20802956-20802975 | MsG0880043217.01.T01:CDS | 35.0% | |
| GAATATCACTACAATTGGTG+AGG | - | Chr8:20802612-20802631 | MsG0880043217.01.T01:intron | 35.0% | |
| TATGTTGAGGTAAATCATGG+GGG | - | Chr8:20802463-20802482 | MsG0880043217.01.T01:CDS | 35.0% | |
| TTAAGTCAGTTAAGGACGTT+AGG | - | Chr8:20802514-20802533 | MsG0880043217.01.T01:CDS | 35.0% | |
| TTCTACTACAACAGCACTTA+AGG | + | Chr8:20802572-20802591 | None:intergenic | 35.0% | |
| ! | AAGTAGTCTTTTCCTTTGTC+TGG | + | Chr8:20803088-20803107 | None:intergenic | 35.0% |
| !! | GAAAGTATTGATCCAGACAA+AGG | - | Chr8:20803073-20803092 | MsG0880043217.01.T01:CDS | 35.0% |
| !!! | TCAAGTTTTGGAATCCATTC+AGG | + | Chr8:20802718-20802737 | None:intergenic | 35.0% |
| TATGGGATGATGTCCTATGA+TGG | - | Chr8:20802829-20802848 | MsG0880043217.01.T01:CDS | 40.0% | |
| !!! | CAAGTTTTTAGTGACTGCAG+TGG | + | Chr8:20802787-20802806 | None:intergenic | 40.0% |
| AATTGAAGCCGCTGAAGTTG+GGG | + | Chr8:20802673-20802692 | None:intergenic | 45.0% | |
| AGGCATGTCAGAAGAGAACA+TGG | - | Chr8:20802541-20802560 | MsG0880043217.01.T01:CDS | 45.0% | |
| CAATTGAAGCCGCTGAAGTT+GGG | + | Chr8:20802674-20802693 | None:intergenic | 45.0% | |
| CTTCAGCGGCTTCAATTGAA+AGG | - | Chr8:20802676-20802695 | MsG0880043217.01.T01:intron | 45.0% | |
| GAACCTCACTCGCTTGAATA+GGG | - | Chr8:20802900-20802919 | MsG0880043217.01.T01:CDS | 45.0% | |
| GCATGTCAGAAGAGAACATG+GGG | - | Chr8:20802543-20802562 | MsG0880043217.01.T01:CDS | 45.0% | |
| GGCATGTCAGAAGAGAACAT+GGG | - | Chr8:20802542-20802561 | MsG0880043217.01.T01:CDS | 45.0% | |
| TCAATTGAAGCCGCTGAAGT+TGG | + | Chr8:20802675-20802694 | None:intergenic | 45.0% | |
| TGAACCTCACTCGCTTGAAT+AGG | - | Chr8:20802899-20802918 | MsG0880043217.01.T01:CDS | 45.0% | |
| TTACCCTATTCAAGCGAGTG+AGG | + | Chr8:20802906-20802925 | None:intergenic | 45.0% | |
| ATCCAAGGACCTGATGCCTG+AGG | + | Chr8:20803009-20803028 | None:intergenic | 55.0% | |
| CATCTCCACCCCAACTTCAG+CGG | - | Chr8:20802662-20802681 | MsG0880043217.01.T01:intron | 55.0% | |
| TCCAAGGACCTGATGCCTGA+GGG | + | Chr8:20803008-20803027 | None:intergenic | 55.0% | |
| !! | TGAGGGTACCTCCTTCAGCT+GGG | + | Chr8:20802991-20803010 | None:intergenic | 55.0% |
| ACCCTCAGGCATCAGGTCCT+TGG | - | Chr8:20803004-20803023 | MsG0880043217.01.T01:CDS | 60.0% | |
| CAGAATCCCCCAGCTGAAGG+AGG | - | Chr8:20802980-20802999 | MsG0880043217.01.T01:CDS | 60.0% | |
| CAGCTGGGGGATTCTGTCCA+TGG | + | Chr8:20802976-20802995 | None:intergenic | 60.0% | |
| GGACAGAATCCCCCAGCTGA+AGG | - | Chr8:20802977-20802996 | MsG0880043217.01.T01:CDS | 60.0% | |
| TGAAGCCGCTGAAGTTGGGG+TGG | + | Chr8:20802670-20802689 | None:intergenic | 60.0% | |
| ! | AGGGTACCTCCTTCAGCTGG+GGG | + | Chr8:20802989-20803008 | None:intergenic | 60.0% |
| !! | AGGAGGTACCCTCAGGCATC+AGG | - | Chr8:20802997-20803016 | MsG0880043217.01.T01:CDS | 60.0% |
| !! | CAGCTGAAGGAGGTACCCTC+AGG | - | Chr8:20802990-20803009 | MsG0880043217.01.T01:CDS | 60.0% |
| !! | CTGAGGGTACCTCCTTCAGC+TGG | + | Chr8:20802992-20803011 | None:intergenic | 60.0% |
| !! | GAGGGTACCTCCTTCAGCTG+GGG | + | Chr8:20802990-20803009 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 20802439 | 20803109 | 20802439 | ID=MsG0880043217.01;Name=MsG0880043217.01 |
| Chr8 | mRNA | 20802439 | 20803109 | 20802439 | ID=MsG0880043217.01.T01;Parent=MsG0880043217.01;Name=MsG0880043217.01.T01;_AED=0.50;_eAED=0.52;_QI=0|0|0|1|1|1|2|0|159 |
| Chr8 | exon | 20802757 | 20803109 | 20802757 | ID=MsG0880043217.01.T01:exon:4232;Parent=MsG0880043217.01.T01 |
| Chr8 | exon | 20802439 | 20802565 | 20802439 | ID=MsG0880043217.01.T01:exon:4231;Parent=MsG0880043217.01.T01 |
| Chr8 | CDS | 20802757 | 20803109 | 20802757 | ID=MsG0880043217.01.T01:cds;Parent=MsG0880043217.01.T01 |
| Chr8 | CDS | 20802439 | 20802565 | 20802439 | ID=MsG0880043217.01.T01:cds;Parent=MsG0880043217.01.T01 |
| Gene Sequence |
| Protein sequence |
