AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280006546.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006546.01.T01 MTR_2g010530 97.436 117 3 0 108 224 384 500 3.24e-82 254
MsG0280006546.01.T01 MTR_2g010530 85.981 107 14 1 3 108 136 242 5.80e-53 177
MsG0280006546.01.T01 MTR_6g035115 76.068 117 28 0 108 224 387 503 2.33e-62 202
MsG0280006546.01.T01 MTR_6g035115 71.963 107 29 1 3 108 139 245 2.03e-43 152
MsG0280006546.01.T01 MTR_5g095290 75.000 112 28 0 108 219 390 501 2.70e-59 194
MsG0280006546.01.T01 MTR_5g095290 64.486 107 37 1 3 108 143 249 1.88e-38 139
MsG0280006546.01.T01 MTR_5g095260 55.621 169 66 3 52 219 342 502 1.70e-57 189
MsG0280006546.01.T01 MTR_5g095260 60.748 107 41 1 3 108 143 249 5.78e-37 135
MsG0280006546.01.T01 MTR_5g095220 51.705 176 76 4 46 220 305 472 1.26e-54 181
MsG0280006546.01.T01 MTR_5g095220 64.486 107 37 1 3 108 115 221 2.29e-37 135
MsG0280006546.01.T01 MTR_1g035140 51.497 167 70 3 53 217 342 499 1.71e-50 171
MsG0280006546.01.T01 MTR_1g035140 33.784 148 92 5 3 148 139 282 3.54e-16 77.0
MsG0280006546.01.T01 MTR_5g094500 64.348 115 39 1 108 222 27 139 3.08e-50 160
MsG0280006546.01.T01 MTR_3g058220 49.405 168 77 2 58 224 347 507 1.89e-49 169
MsG0280006546.01.T01 MTR_3g058220 38.158 152 90 4 3 151 138 288 1.73e-23 98.2
MsG0280006546.01.T01 MTR_3g058390 63.333 120 42 1 105 224 388 505 2.91e-49 168
MsG0280006546.01.T01 MTR_3g058390 35.948 153 93 4 3 151 137 288 7.05e-23 96.3
MsG0280006546.01.T01 MTR_3g058000 55.725 131 58 0 88 218 375 505 4.08e-49 167
MsG0280006546.01.T01 MTR_3g058000 31.395 172 103 5 3 166 140 304 2.11e-19 86.7
MsG0280006546.01.T01 MTR_3g058210 48.810 168 78 2 53 219 344 504 4.48e-49 167
MsG0280006546.01.T01 MTR_3g058210 36.774 155 89 5 3 151 139 290 2.16e-23 97.8
MsG0280006546.01.T01 MTR_5g094550 63.303 109 40 0 108 216 390 498 7.54e-49 167
MsG0280006546.01.T01 MTR_5g094550 32.653 147 95 3 3 149 141 283 7.56e-18 82.0
MsG0280006546.01.T01 MTR_4g048580 66.055 109 37 0 108 216 390 498 7.62e-49 167
MsG0280006546.01.T01 MTR_4g048580 36.538 104 65 1 4 106 142 245 5.67e-17 79.3
MsG0280006546.01.T01 MTR_5g073320 53.741 147 61 1 69 215 359 498 1.55e-48 166
MsG0280006546.01.T01 MTR_5g073320 38.095 105 64 1 3 106 142 246 1.07e-17 81.6
MsG0280006546.01.T01 MTR_3g058380 48.256 172 81 2 53 223 262 426 2.07e-48 164
MsG0280006546.01.T01 MTR_3g058380 37.500 152 87 5 5 151 60 208 1.40e-23 97.8
MsG0280006546.01.T01 MTR_1g442730 65.179 112 39 0 105 216 387 498 2.60e-48 166
MsG0280006546.01.T01 MTR_1g442730 40.000 105 61 2 3 106 136 239 7.93e-17 79.0
MsG0280006546.01.T01 MTR_1g035190 67.290 107 35 0 110 216 378 484 3.37e-48 165
MsG0280006546.01.T01 MTR_1g035190 32.432 148 96 4 3 148 122 267 5.48e-17 79.3
MsG0280006546.01.T01 MTR_3g058060 51.634 153 67 2 68 218 357 504 8.97e-48 166
MsG0280006546.01.T01 MTR_3g058060 35.238 105 67 1 3 106 140 244 2.24e-16 77.8
MsG0280006546.01.T01 MTR_5g018990 50.314 159 71 2 62 219 354 505 1.11e-47 164
MsG0280006546.01.T01 MTR_5g018990 41.905 105 60 1 3 106 139 243 1.22e-19 87.0
MsG0280006546.01.T01 MTR_6g462640 61.345 119 46 0 105 223 388 506 1.69e-47 163
MsG0280006546.01.T01 MTR_6g462640 38.562 153 89 4 3 151 137 288 1.16e-24 101
MsG0280006546.01.T01 MTR_3g058400 60.833 120 45 1 105 224 389 506 2.18e-47 163
MsG0280006546.01.T01 MTR_3g058400 37.013 154 89 5 3 151 139 289 5.32e-22 94.0
MsG0280006546.01.T01 MTR_5g094660 52.740 146 62 1 70 215 358 496 2.83e-47 162
MsG0280006546.01.T01 MTR_5g094660 45.631 103 55 1 5 106 143 245 1.04e-20 90.1
MsG0280006546.01.T01 MTR_5g073230 52.381 147 63 1 69 215 347 486 4.45e-47 162
MsG0280006546.01.T01 MTR_5g073230 34.343 99 64 1 9 106 135 233 5.44e-13 67.8
MsG0280006546.01.T01 MTR_3g058240 60.870 115 45 0 105 219 354 468 4.52e-47 162
MsG0280006546.01.T01 MTR_3g058240 35.616 146 90 3 3 145 103 247 1.49e-24 100
MsG0280006546.01.T01 MTR_5g094520 62.963 108 40 0 108 215 316 423 5.97e-47 160
MsG0280006546.01.T01 MTR_5g094520 43.810 105 58 1 3 106 67 171 4.97e-21 90.9
MsG0280006546.01.T01 MTR_5g073250 52.055 146 63 1 70 215 359 497 7.53e-47 162
MsG0280006546.01.T01 MTR_5g073250 42.857 105 59 1 3 106 141 245 5.73e-20 88.2
MsG0280006546.01.T01 MTR_3g057980 59.091 110 45 0 110 219 388 497 7.67e-47 161
MsG0280006546.01.T01 MTR_3g057980 37.333 150 89 3 3 148 138 286 3.81e-23 97.1
MsG0280006546.01.T01 MTR_5g094510 50.667 150 66 2 66 214 94 236 1.36e-46 155
MsG0280006546.01.T01 MTR_0059s0170 47.674 172 74 5 48 215 340 499 2.97e-46 160
MsG0280006546.01.T01 MTR_0059s0170 32.653 147 96 3 3 148 139 283 2.03e-18 83.6
MsG0280006546.01.T01 MTR_5g094570 62.963 108 40 0 108 215 390 497 4.21e-46 159
MsG0280006546.01.T01 MTR_5g094570 37.383 107 65 1 3 109 141 245 5.46e-18 82.4
MsG0280006546.01.T01 MTR_3g058250 60.000 115 46 0 105 219 388 502 5.36e-46 159
MsG0280006546.01.T01 MTR_3g058250 35.948 153 93 4 3 151 137 288 1.87e-23 98.2
MsG0280006546.01.T01 MTR_5g094540 62.037 108 41 0 108 215 390 497 1.00e-45 159
MsG0280006546.01.T01 MTR_5g094540 40.952 105 61 1 3 106 141 245 4.05e-20 88.6
MsG0280006546.01.T01 MTR_5g094520 62.963 108 40 0 108 215 421 528 1.10e-45 159
MsG0280006546.01.T01 MTR_5g094520 43.810 105 58 1 3 106 172 276 9.13e-21 90.5
MsG0280006546.01.T01 MTR_5g094560 62.037 108 41 0 108 215 390 497 1.58e-45 158
MsG0280006546.01.T01 MTR_5g094560 38.095 105 64 1 3 106 141 245 8.01e-18 82.0
MsG0280006546.01.T01 MTR_0554s0020 60.909 110 43 0 110 219 394 503 7.54e-45 156
MsG0280006546.01.T01 MTR_0554s0020 42.718 103 58 1 5 106 141 243 2.70e-22 94.7
MsG0280006546.01.T01 MTR_3g057870 57.143 112 48 0 108 219 128 239 2.70e-44 148
MsG0280006546.01.T01 MTR_3g058110 49.315 146 67 1 70 215 364 502 4.15e-44 154
MsG0280006546.01.T01 MTR_3g058110 35.333 150 89 3 3 147 140 286 1.17e-19 87.4
MsG0280006546.01.T01 MTR_3g058230 47.701 174 78 4 53 223 263 426 8.71e-44 152
MsG0280006546.01.T01 MTR_3g058230 38.158 152 88 5 3 151 67 215 8.89e-24 98.6
MsG0280006546.01.T01 MTR_5g094840 64.655 116 40 1 108 222 396 511 8.93e-44 154
MsG0280006546.01.T01 MTR_5g094840 53.398 103 47 1 5 106 148 250 1.22e-27 109
MsG0280006546.01.T01 MTR_5g094460 50.704 142 63 1 70 211 242 376 1.03e-42 148
MsG0280006546.01.T01 MTR_3g057900 59.459 111 44 1 110 219 388 498 1.14e-42 150
MsG0280006546.01.T01 MTR_3g057900 40.952 105 61 1 3 106 138 242 1.46e-18 84.0
MsG0280006546.01.T01 MTR_3g057800 56.250 112 49 0 108 219 389 500 5.16e-42 149
MsG0280006546.01.T01 MTR_3g057800 30.464 151 102 3 3 151 137 286 7.09e-19 85.1
MsG0280006546.01.T01 MTR_3g057910 59.130 115 47 0 108 222 393 507 5.25e-42 149
MsG0280006546.01.T01 MTR_3g057910 39.806 103 61 1 5 106 141 243 5.62e-18 82.4
MsG0280006546.01.T01 MTR_3g057860 54.464 112 51 0 108 219 392 503 4.02e-41 146
MsG0280006546.01.T01 MTR_3g057860 35.849 106 65 2 3 105 138 243 2.87e-17 80.5
MsG0280006546.01.T01 MTR_3g057970 58.559 111 45 1 110 219 382 492 8.03e-41 145
MsG0280006546.01.T01 MTR_3g057970 40.000 105 62 1 3 106 135 239 2.39e-18 83.6
MsG0280006546.01.T01 MTR_6g035100 57.522 113 44 2 110 218 387 499 2.67e-40 144
MsG0280006546.01.T01 MTR_6g035100 38.462 104 62 2 5 106 141 244 1.37e-12 66.6
MsG0280006546.01.T01 MTR_5g019010 54.545 110 50 0 109 218 394 503 3.54e-40 144
MsG0280006546.01.T01 MTR_5g019010 47.573 103 53 1 5 106 140 242 1.66e-23 98.2
MsG0280006546.01.T01 MTR_4g133750 55.357 112 45 2 110 216 390 501 1.37e-38 139
MsG0280006546.01.T01 MTR_4g133750 37.500 104 64 1 4 106 142 245 4.19e-16 77.0
MsG0280006546.01.T01 MTR_6g034965 54.867 113 47 2 110 218 387 499 4.82e-38 138
MsG0280006546.01.T01 MTR_6g034965 39.423 104 61 2 5 106 141 244 1.40e-14 72.4
MsG0280006546.01.T01 MTR_3g076530 54.464 112 51 0 108 219 393 504 5.09e-37 135
MsG0280006546.01.T01 MTR_8g466180 43.976 166 82 2 50 215 344 498 6.70e-37 135
MsG0280006546.01.T01 MTR_8g466180 33.333 156 94 4 3 151 136 288 5.17e-19 85.5
MsG0280006546.01.T01 MTR_5g018980 49.541 109 55 0 110 218 398 506 2.30e-36 134
MsG0280006546.01.T01 MTR_5g018980 31.469 143 96 1 3 143 138 280 5.33e-17 79.3
MsG0280006546.01.T01 MTR_4g104570 44.898 147 72 2 70 216 59 196 5.38e-36 126
MsG0280006546.01.T01 MTR_3g057170 55.914 93 41 0 110 202 75 167 2.22e-35 123
MsG0280006546.01.T01 MTR_8g016550 55.914 93 41 0 110 202 64 156 2.58e-35 123
MsG0280006546.01.T01 MTR_4g026080 40.936 171 92 3 49 217 36 199 5.34e-35 123
MsG0280006546.01.T01 MTR_4g089055 46.000 150 74 1 70 219 374 516 7.84e-35 129
MsG0280006546.01.T01 MTR_4g089025 45.333 150 75 1 70 219 377 519 1.01e-34 129
MsG0280006546.01.T01 MTR_8g104100 50.893 112 54 1 110 220 152 263 1.87e-34 124
MsG0280006546.01.T01 MTR_4g104540 44.966 149 73 2 70 218 290 429 2.88e-34 127
MsG0280006546.01.T01 MTR_4g089020 45.638 149 74 1 70 218 352 493 3.69e-34 127
MsG0280006546.01.T01 MTR_4g089030 45.638 149 74 1 70 218 376 517 1.15e-33 126
MsG0280006546.01.T01 MTR_4g026050 49.091 110 56 0 108 217 386 495 5.95e-33 124
MsG0280006546.01.T01 MTR_4g026030 50.000 110 55 0 108 217 234 343 6.09e-33 122
MsG0280006546.01.T01 MTR_4g025980 48.673 113 58 0 105 217 383 495 7.28e-33 124
MsG0280006546.01.T01 MTR_1g097240 49.107 112 55 1 104 215 384 493 1.46e-32 123
MsG0280006546.01.T01 MTR_3g076560 50.893 112 54 1 110 220 407 518 1.88e-32 123
MsG0280006546.01.T01 MTR_5g023680 50.000 106 53 0 108 213 362 467 3.16e-32 122
MsG0280006546.01.T01 MTR_4g057645 42.466 146 70 4 85 223 1 139 3.20e-32 114
MsG0280006546.01.T01 MTR_4g104610 40.123 162 87 2 58 219 348 499 3.31e-32 122
MsG0280006546.01.T01 MTR_4g026200 47.273 110 58 0 108 217 386 495 3.67e-32 122
MsG0280006546.01.T01 MTR_8g104030 47.321 112 58 1 110 220 171 282 4.41e-32 118
MsG0280006546.01.T01 MTR_4g104660 40.936 171 86 5 53 215 348 511 7.97e-32 121
MsG0280006546.01.T01 MTR_4g025940 50.000 106 53 0 108 213 64 169 8.15e-32 114
MsG0280006546.01.T01 MTR_5g045770 50.000 106 53 0 108 213 386 491 4.38e-31 119
MsG0280006546.01.T01 MTR_7g075600 49.495 99 50 0 109 207 393 491 5.63e-31 119
MsG0280006546.01.T01 MTR_6g084900 45.872 109 58 1 109 216 157 265 5.80e-31 115
MsG0280006546.01.T01 MTR_4g071710 37.017 181 96 3 61 223 338 518 6.64e-31 119
MsG0280006546.01.T01 MTR_7g075610 48.485 99 51 0 109 207 394 492 7.75e-31 118
MsG0280006546.01.T01 MTR_5g094670 34.742 213 68 4 3 215 122 263 9.52e-31 114
MsG0280006546.01.T01 MTR_0022s0290 39.766 171 93 3 49 216 352 515 1.04e-30 118
MsG0280006546.01.T01 MTR_7g075540 49.495 99 50 0 109 207 391 489 1.26e-30 118
MsG0280006546.01.T01 MTR_5g073020 48.571 105 54 0 110 214 394 498 1.35e-30 118
MsG0280006546.01.T01 MTR_5g070690 50.000 108 53 1 110 216 393 500 3.26e-30 117
MsG0280006546.01.T01 MTR_5g070800 50.000 108 53 1 110 216 393 500 3.26e-30 117
MsG0280006546.01.T01 MTR_7g012860 48.214 112 56 1 110 221 392 501 4.25e-30 116
MsG0280006546.01.T01 MTR_0287s0060 48.214 112 56 1 110 221 392 501 4.25e-30 116
MsG0280006546.01.T01 MTR_7g012330 47.321 112 57 1 110 221 391 500 6.16e-30 116
MsG0280006546.01.T01 MTR_5g070830 49.074 108 54 1 110 216 505 612 6.25e-30 117
MsG0280006546.01.T01 MTR_4g025970 49.057 106 54 0 108 213 387 492 7.06e-30 115
MsG0280006546.01.T01 MTR_5g070700 49.550 111 55 1 107 216 392 502 9.10e-30 115
MsG0280006546.01.T01 MTR_1g116890 37.895 190 109 3 35 222 329 511 1.13e-29 115
MsG0280006546.01.T01 MTR_4g133760 38.764 178 69 5 53 218 239 388 1.19e-29 114
MsG0280006546.01.T01 MTR_4g104640 49.074 108 53 1 110 215 409 516 1.65e-29 115
MsG0280006546.01.T01 MTR_8g091680 45.794 107 58 0 110 216 343 449 3.20e-29 114
MsG0280006546.01.T01 MTR_5g070710 49.074 108 54 1 110 216 392 499 3.46e-29 114
MsG0280006546.01.T01 MTR_7g075580 47.573 103 54 0 109 211 393 495 5.14e-29 113
MsG0280006546.01.T01 MTR_1g023720 48.598 107 54 1 110 215 403 509 5.31e-29 113
MsG0280006546.01.T01 MTR_5g021390 44.828 116 63 1 110 224 404 519 7.82e-29 113
MsG0280006546.01.T01 MTR_5g070920 48.148 108 55 1 110 216 394 501 1.44e-28 112
MsG0280006546.01.T01 MTR_1g023730 40.506 158 81 4 62 215 361 509 1.84e-28 112
MsG0280006546.01.T01 MTR_7g075390 47.917 96 50 0 111 206 397 492 2.14e-28 112
MsG0280006546.01.T01 MTR_1g023700 48.598 107 54 1 110 215 404 510 2.51e-28 111
MsG0280006546.01.T01 MTR_4g104550 39.865 148 81 2 70 216 351 491 2.65e-28 111
MsG0280006546.01.T01 MTR_6g084770 44.444 108 59 1 110 216 396 503 3.92e-28 111
MsG0280006546.01.T01 MTR_0451s0010 43.925 107 60 0 109 215 213 319 1.48e-27 107
MsG0280006546.01.T01 MTR_5g072980 46.667 105 56 0 110 214 394 498 1.91e-27 109
MsG0280006546.01.T01 MTR_5g072930 46.667 105 56 0 110 214 394 498 1.91e-27 109
MsG0280006546.01.T01 MTR_4g102310 41.497 147 76 3 70 216 364 500 2.05e-27 109
MsG0280006546.01.T01 MTR_5g070850 48.148 108 55 1 110 216 395 502 2.74e-27 108
MsG0280006546.01.T01 MTR_8g091690 42.991 107 61 0 110 216 366 472 3.55e-27 108
MsG0280006546.01.T01 MTR_5g007450 45.872 109 58 1 109 216 388 496 4.37e-27 108
MsG0280006546.01.T01 MTR_5g070840 45.045 111 54 2 110 213 66 176 4.71e-27 102
MsG0280006546.01.T01 MTR_2g065360 43.396 106 60 0 110 215 364 469 1.19e-26 107
MsG0280006546.01.T01 MTR_8g020940 43.478 115 63 1 109 221 395 509 1.33e-26 107
MsG0280006546.01.T01 MTR_4g102280 46.296 108 55 1 109 216 402 506 1.56e-26 106
MsG0280006546.01.T01 MTR_1g103680 44.340 106 59 0 110 215 390 495 1.65e-26 106
MsG0280006546.01.T01 MTR_5g070973 43.519 108 60 1 110 216 66 173 2.02e-26 100
MsG0280006546.01.T01 MTR_7g103450 47.273 110 56 1 110 217 407 516 2.34e-26 106
MsG0280006546.01.T01 MTR_5g056720 42.453 106 59 1 110 215 319 422 2.68e-26 105
MsG0280006546.01.T01 MTR_1g103670 43.396 106 60 0 110 215 389 494 3.94e-26 105
MsG0280006546.01.T01 MTR_1g037370 42.991 107 61 0 109 215 385 491 5.65e-26 105
MsG0280006546.01.T01 MTR_8g046240 42.453 106 61 0 110 215 398 503 6.33e-26 105
MsG0280006546.01.T01 MTR_0638s0020 42.453 106 61 0 110 215 321 426 8.66e-26 103
MsG0280006546.01.T01 MTR_5g007550 44.037 109 60 1 109 216 388 496 1.47e-25 103
MsG0280006546.01.T01 MTR_8g046210 41.509 106 62 0 110 215 398 503 1.71e-25 103
MsG0280006546.01.T01 MTR_3g025260 41.739 115 63 1 105 215 389 503 2.88e-25 103
MsG0280006546.01.T01 MTR_8g020950 41.739 115 65 1 109 221 397 511 5.13e-25 102
MsG0280006546.01.T01 MTR_8g076290 43.966 116 64 1 109 223 395 510 8.16e-25 102
MsG0280006546.01.T01 MTR_5g007460 43.519 108 60 1 110 216 368 475 1.69e-24 100
MsG0280006546.01.T01 MTR_3g025230 41.739 115 63 1 105 215 389 503 1.77e-24 100
MsG0280006546.01.T01 MTR_1g031700 41.905 105 61 0 111 215 390 494 1.83e-24 100
MsG0280006546.01.T01 MTR_3g024520 41.739 115 63 1 105 215 389 503 4.40e-24 99.8
MsG0280006546.01.T01 MTR_1750s0010 50.000 98 42 1 70 167 60 150 1.57e-23 92.8
MsG0280006546.01.T01 MTR_4g078110 40.541 111 65 1 110 219 369 479 2.34e-23 97.8
MsG0280006546.01.T01 MTR_2g097840 54.286 70 32 0 147 216 61 130 5.24e-23 90.5
MsG0280006546.01.T01 MTR_4g109470 42.056 107 58 1 105 207 386 492 8.31e-23 96.3
MsG0280006546.01.T01 MTR_8g020960 39.655 116 67 2 109 221 396 511 1.71e-22 95.5
MsG0280006546.01.T01 MTR_3g077460 49.333 75 38 0 110 184 313 387 4.80e-22 93.2
MsG0280006546.01.T01 MTR_3g436540 42.727 110 58 2 110 216 398 505 8.22e-22 93.6
MsG0280006546.01.T01 MTR_3g025250 41.121 107 59 1 105 207 159 265 1.78e-21 90.5
MsG0280006546.01.T01 MTR_1g055325 44.444 81 45 0 109 189 409 489 8.68e-21 90.5
MsG0280006546.01.T01 MTR_2g073480 36.667 120 69 1 70 189 272 384 1.40e-20 89.4
MsG0280006546.01.T01 MTR_7g092620 38.983 118 67 3 108 222 394 509 1.65e-20 89.7
MsG0280006546.01.T01 MTR_2g073420 45.679 81 44 0 109 189 399 479 1.73e-20 89.7
MsG0280006546.01.T01 MTR_2g073440 36.667 120 69 1 70 189 339 451 2.08e-20 89.4
MsG0280006546.01.T01 MTR_3g436390 36.667 150 81 4 62 207 349 488 2.52e-20 89.0
MsG0280006546.01.T01 MTR_5g018500 34.328 134 71 4 70 198 50 171 3.63e-20 85.1
MsG0280006546.01.T01 MTR_6g022450 45.545 101 50 2 109 207 401 498 5.00e-20 88.2
MsG0280006546.01.T01 MTR_4g062500 34.545 165 90 4 69 223 367 523 6.65e-20 87.8
MsG0280006546.01.T01 MTR_1g090987 40.000 95 56 1 109 203 75 168 8.68e-20 83.6
MsG0280006546.01.T01 MTR_6g008630 42.857 105 55 2 109 211 324 425 1.18e-19 87.0
MsG0280006546.01.T01 MTR_3g076550 37.500 120 60 2 100 219 370 474 3.75e-19 85.5
MsG0280006546.01.T01 MTR_4g062510 33.929 168 92 5 60 215 358 518 3.79e-19 85.9
MsG0280006546.01.T01 MTR_8g012590 34.899 149 81 4 70 214 358 494 4.30e-19 85.5
MsG0280006546.01.T01 MTR_7g056103 39.423 104 56 2 108 205 392 494 4.84e-19 85.5
MsG0280006546.01.T01 MTR_1g107300 33.939 165 93 5 60 215 47 204 8.42e-19 81.6
MsG0280006546.01.T01 MTR_1g091023 40.000 95 56 1 109 203 387 480 1.25e-18 84.3
MsG0280006546.01.T01 MTR_1g091003 41.573 89 51 1 109 197 387 474 1.68e-18 84.0
MsG0280006546.01.T01 MTR_6g008530 44.118 102 52 2 105 204 414 512 1.74e-18 84.0
MsG0280006546.01.T01 MTR_6g039630 40.000 105 62 1 3 106 136 240 2.02e-18 82.0
MsG0280006546.01.T01 MTR_5g045250 40.187 107 61 1 105 211 407 510 2.22e-18 83.6
MsG0280006546.01.T01 MTR_3g014880 43.878 98 50 2 109 204 415 509 2.91e-18 83.2
MsG0280006546.01.T01 MTR_1g091010 38.947 95 57 1 109 203 386 479 2.95e-18 83.2
MsG0280006546.01.T01 MTR_8g468780 36.134 119 69 3 108 222 325 440 4.62e-18 82.4
MsG0280006546.01.T01 MTR_4g088420 41.071 112 61 2 105 214 117 225 5.01e-18 80.1
MsG0280006546.01.T01 MTR_8g080520 41.346 104 57 2 108 211 419 518 5.19e-18 82.4
MsG0280006546.01.T01 MTR_6g008640 42.857 98 51 2 109 204 412 506 6.22e-18 82.4
MsG0280006546.01.T01 MTR_4g088160 33.333 120 67 2 109 215 390 509 6.66e-18 82.0
MsG0280006546.01.T01 MTR_6g008600 40.952 105 57 2 109 211 416 517 8.16e-18 82.0
MsG0280006546.01.T01 MTR_7g087520 33.051 118 73 2 110 221 402 519 8.61e-18 82.0
MsG0280006546.01.T01 MTR_1g107295 38.053 113 64 2 109 215 404 516 8.76e-18 81.6
MsG0280006546.01.T01 MTR_8g469300 35.833 120 70 3 107 222 393 509 1.05e-17 81.6
MsG0280006546.01.T01 MTR_2g450040 41.414 99 53 2 108 204 404 499 1.28e-17 81.3
MsG0280006546.01.T01 MTR_6g008620 42.157 102 54 2 105 204 410 508 1.43e-17 81.3
MsG0280006546.01.T01 MTR_4g088195 32.500 120 68 2 109 215 390 509 1.51e-17 81.3
MsG0280006546.01.T01 MTR_8g036185 36.134 119 66 1 110 218 400 518 1.75e-17 80.9
MsG0280006546.01.T01 MTR_4g095050 41.837 98 49 2 110 207 394 483 1.79e-17 80.9
MsG0280006546.01.T01 MTR_7g028020 34.483 116 64 3 112 215 390 505 2.05e-17 80.9
MsG0280006546.01.T01 MTR_4g018800 41.284 109 59 2 105 211 410 515 2.56e-17 80.5
MsG0280006546.01.T01 MTR_7g027960 34.483 116 64 3 112 215 390 505 3.73e-17 80.1
MsG0280006546.01.T01 MTR_4g088400 34.395 157 87 4 64 216 371 515 5.00e-17 79.7
MsG0280006546.01.T01 MTR_5g093960 36.842 95 59 1 109 203 101 194 6.45e-17 77.8
MsG0280006546.01.T01 MTR_0171s0020 36.364 110 65 2 108 215 396 502 7.79e-17 79.0
MsG0280006546.01.T01 MTR_3g020780 38.017 121 64 3 108 221 397 513 9.79e-17 79.0
MsG0280006546.01.T01 MTR_6g042540 42.553 94 49 2 109 200 407 497 1.16e-16 78.6
MsG0280006546.01.T01 MTR_6g008500 40.404 99 54 2 105 201 420 515 2.17e-16 77.8
MsG0280006546.01.T01 MTR_6g008430 40.000 105 58 3 109 211 407 508 2.51e-16 77.4
MsG0280006546.01.T01 MTR_0181s0030 36.364 110 65 2 108 215 390 496 2.85e-16 77.4
MsG0280006546.01.T01 MTR_4g088170 32.787 122 67 3 109 215 390 511 3.12e-16 77.4
MsG0280006546.01.T01 MTR_0171s0010 37.037 108 63 2 110 215 400 504 3.75e-16 77.0
MsG0280006546.01.T01 MTR_8g012585 33.544 158 90 4 70 224 308 453 4.85e-16 76.6
MsG0280006546.01.T01 MTR_6g008650 41.837 98 52 2 109 204 414 508 6.23e-16 76.3
MsG0280006546.01.T01 MTR_8g027040 39.450 109 62 3 105 211 432 538 8.88e-16 75.9
MsG0280006546.01.T01 MTR_5g075450 33.333 135 79 3 70 202 362 487 1.24e-15 75.5
MsG0280006546.01.T01 MTR_6g042610 41.837 98 52 2 105 200 404 498 1.49e-15 75.5
MsG0280006546.01.T01 MTR_2g010320 42.105 95 50 3 119 211 405 496 1.70e-15 75.1
MsG0280006546.01.T01 MTR_5g016440 41.489 94 49 2 110 203 385 472 4.51e-15 73.9
MsG0280006546.01.T01 MTR_7g075570 29.730 148 85 3 64 211 87 215 5.49e-15 72.0
MsG0280006546.01.T01 MTR_3g057990 31.667 120 79 2 7 123 86 205 6.24e-15 71.2
MsG0280006546.01.T01 MTR_4g094775 41.837 98 49 2 110 207 390 479 6.54e-15 73.6
MsG0280006546.01.T01 MTR_4g088425 35.036 137 76 3 64 194 355 484 1.06e-14 72.8
MsG0280006546.01.T01 MTR_2g010250 40.000 95 52 3 119 211 407 498 1.43e-14 72.4
MsG0280006546.01.T01 MTR_4g088405 34.722 144 80 4 44 183 266 399 1.48e-14 72.4
MsG0280006546.01.T01 MTR_1g031710 34.579 107 64 2 111 215 200 302 3.45e-14 70.5
MsG0280006546.01.T01 MTR_0171s0030 35.455 110 66 2 108 215 308 414 5.55e-14 70.5
MsG0280006546.01.T01 MTR_2g010330 45.205 73 38 2 119 189 409 481 1.09e-13 69.7
MsG0280006546.01.T01 MTR_2g010290 36.559 93 54 2 119 209 434 523 1.50e-13 69.3
MsG0280006546.01.T01 MTR_2g010380 40.000 95 52 3 119 211 411 502 1.59e-13 69.3
MsG0280006546.01.T01 MTR_1g097220 33.945 109 65 2 110 214 419 524 1.78e-13 69.3
MsG0280006546.01.T01 MTR_4g094772 40.000 90 46 2 110 199 381 462 2.93e-13 68.6
MsG0280006546.01.T01 MTR_2g010300 40.217 92 50 3 122 211 394 482 3.76e-13 68.2
MsG0280006546.01.T01 MTR_8g098565 38.947 95 54 3 119 211 407 499 1.17e-12 67.0
MsG0280006546.01.T01 MTR_4g077210 35.354 99 60 2 109 207 394 488 1.78e-12 66.2
MsG0280006546.01.T01 MTR_7g092600 35.644 101 53 2 108 199 393 490 1.87e-12 66.2
MsG0280006546.01.T01 MTR_2g437840 37.778 90 48 2 110 199 390 471 2.94e-12 65.5
MsG0280006546.01.T01 MTR_4g035330 38.889 90 47 2 110 199 378 459 4.05e-12 65.1
MsG0280006546.01.T01 MTR_5g034900 28.652 178 91 6 53 211 350 510 5.70e-12 64.7
MsG0280006546.01.T01 MTR_5g094790 46.154 78 35 1 7 84 35 105 6.67e-12 63.2
MsG0280006546.01.T01 MTR_1g111240 32.323 99 58 2 110 202 424 519 1.66e-11 63.5
MsG0280006546.01.T01 MTR_0408s0010 42.857 77 39 2 126 200 2 75 3.17e-11 58.5
MsG0280006546.01.T01 MTR_1g492820 39.535 86 46 4 108 189 406 489 3.25e-11 62.8
MsG0280006546.01.T01 MTR_8g042020 33.333 144 81 4 56 192 367 502 5.62e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006546.01.T01 AT2G02580 52.294 109 52 0 110 218 389 497 3.44e-35 130
MsG0280006546.01.T01 AT2G45550 52.830 106 50 0 110 215 399 504 3.55e-34 128
MsG0280006546.01.T01 AT5G57260 50.000 106 53 0 110 215 392 497 6.97e-34 127
MsG0280006546.01.T01 AT2G45570 50.943 106 52 0 110 215 400 505 2.60e-33 125
MsG0280006546.01.T01 AT3G26290 50.450 111 55 0 108 218 400 510 3.52e-33 125
MsG0280006546.01.T01 AT3G26290 50.450 111 55 0 108 218 387 497 4.15e-33 125
MsG0280006546.01.T01 AT3G26310 50.926 108 53 0 110 217 388 495 4.15e-33 125
MsG0280006546.01.T01 AT3G26230 40.123 162 88 3 58 219 346 498 4.46e-33 124
MsG0280006546.01.T01 AT3G26330 48.649 111 57 0 108 218 387 497 8.51e-33 124
MsG0280006546.01.T01 AT3G26300 48.624 109 56 0 110 218 389 497 1.64e-32 123
MsG0280006546.01.T01 AT2G45560 50.000 106 53 0 110 215 399 504 1.81e-32 123
MsG0280006546.01.T01 AT1G33720 50.000 106 53 0 110 215 267 372 1.84e-32 121
MsG0280006546.01.T01 AT1G33720 50.000 106 53 0 110 215 267 372 1.84e-32 121
MsG0280006546.01.T01 AT1G33720 50.000 106 53 0 110 215 267 372 1.84e-32 121
MsG0280006546.01.T01 AT1G33720 50.000 106 53 0 110 215 292 397 2.79e-32 121
MsG0280006546.01.T01 AT3G26210 50.467 107 53 0 110 216 392 498 4.98e-32 122
MsG0280006546.01.T01 AT1G13080 48.113 106 55 0 110 215 275 380 7.18e-32 120
MsG0280006546.01.T01 AT2G45580 41.096 146 78 1 70 215 214 351 7.32e-32 119
MsG0280006546.01.T01 AT3G44250 51.429 105 51 0 110 214 389 493 8.34e-32 121
MsG0280006546.01.T01 AT1G33730 49.074 108 55 0 105 212 258 365 8.64e-32 119
MsG0280006546.01.T01 AT1G33730 49.074 108 55 0 105 212 258 365 8.64e-32 119
MsG0280006546.01.T01 AT1G33720 50.000 106 53 0 110 215 399 504 9.61e-32 121
MsG0280006546.01.T01 AT5G24950 40.881 159 90 3 59 216 339 494 1.29e-31 120
MsG0280006546.01.T01 AT3G26180 38.182 165 94 3 52 215 207 364 2.07e-31 118
MsG0280006546.01.T01 AT3G48280 43.421 152 82 3 68 218 340 488 2.11e-31 120
MsG0280006546.01.T01 AT2G45580 41.096 146 78 1 70 215 368 505 3.18e-31 120
MsG0280006546.01.T01 AT3G26320 45.872 109 59 0 110 218 389 497 3.18e-31 119
MsG0280006546.01.T01 AT3G26270 47.273 110 56 1 110 219 394 501 3.73e-31 119
MsG0280006546.01.T01 AT1G13080 48.113 106 55 0 110 215 393 498 3.91e-31 119
MsG0280006546.01.T01 AT3G61040 50.467 107 53 0 109 215 387 493 4.54e-31 119
MsG0280006546.01.T01 AT3G53300 46.903 113 60 0 105 217 385 497 8.63e-31 118
MsG0280006546.01.T01 AT3G26280 50.000 104 50 1 112 215 397 498 1.79e-30 117
MsG0280006546.01.T01 AT3G26280 50.000 104 50 1 112 215 414 515 1.89e-30 117
MsG0280006546.01.T01 AT5G25120 40.625 160 92 2 58 217 336 492 2.34e-30 117
MsG0280006546.01.T01 AT5G24960 48.305 118 60 1 100 216 378 495 2.86e-30 117
MsG0280006546.01.T01 AT3G48310 40.000 160 88 2 58 216 335 487 3.02e-30 117
MsG0280006546.01.T01 AT3G26160 43.919 148 72 3 70 215 360 498 3.45e-30 117
MsG0280006546.01.T01 AT5G25130 40.625 160 92 2 58 217 336 492 3.57e-30 117
MsG0280006546.01.T01 AT3G26180 48.571 105 54 0 111 215 394 498 3.86e-30 116
MsG0280006546.01.T01 AT3G26170 40.000 155 85 3 62 215 351 498 4.76e-30 116
MsG0280006546.01.T01 AT3G26220 46.364 110 57 1 110 219 394 501 1.11e-29 115
MsG0280006546.01.T01 AT3G48290 38.750 160 90 3 58 216 336 488 1.19e-29 115
MsG0280006546.01.T01 AT3G53280 44.954 109 60 0 110 218 388 496 1.35e-29 115
MsG0280006546.01.T01 AT5G25140 50.000 108 54 0 110 217 385 492 1.40e-29 115
MsG0280006546.01.T01 AT3G48290 38.750 160 90 3 58 216 362 514 1.72e-29 115
MsG0280006546.01.T01 AT2G30770 41.358 162 90 4 57 216 336 494 1.81e-29 115
MsG0280006546.01.T01 AT5G35715 45.133 113 62 0 105 217 323 435 2.22e-29 114
MsG0280006546.01.T01 AT1G11610 45.763 118 63 1 100 216 377 494 4.71e-29 114
MsG0280006546.01.T01 AT3G26830 42.361 144 64 5 53 186 331 465 5.05e-29 113
MsG0280006546.01.T01 AT1G13100 43.750 144 64 5 53 187 331 466 7.92e-29 113
MsG0280006546.01.T01 AT3G48320 45.299 117 63 1 101 216 371 487 1.03e-28 112
MsG0280006546.01.T01 AT3G26150 41.216 148 76 3 70 215 360 498 1.45e-28 112
MsG0280006546.01.T01 AT1G13110 35.227 176 97 5 53 219 337 504 2.34e-28 112
MsG0280006546.01.T01 AT3G48270 38.788 165 90 4 60 216 325 486 6.46e-28 110
MsG0280006546.01.T01 AT1G13090 42.361 144 66 5 53 187 331 466 7.94e-28 110
MsG0280006546.01.T01 AT5G25180 38.217 157 89 2 62 217 343 492 9.22e-28 110
MsG0280006546.01.T01 AT2G30750 41.358 162 90 4 57 216 336 494 1.37e-27 109
MsG0280006546.01.T01 AT4G13770 34.356 163 99 2 58 219 345 500 1.74e-27 109
MsG0280006546.01.T01 AT3G48300 38.125 160 87 4 58 216 332 480 4.24e-27 108
MsG0280006546.01.T01 AT3G48300 38.125 160 87 4 58 216 334 482 4.30e-27 108
MsG0280006546.01.T01 AT4G36220 43.519 108 60 1 110 216 406 513 4.53e-27 108
MsG0280006546.01.T01 AT4G36220 36.047 86 53 2 3 87 141 225 1.23e-11 63.9
MsG0280006546.01.T01 AT3G26200 45.794 107 58 0 110 216 390 496 1.02e-26 107
MsG0280006546.01.T01 AT4G31500 37.059 170 98 5 53 216 330 496 1.09e-26 107
MsG0280006546.01.T01 AT3G26190 43.119 109 62 0 110 218 390 498 1.78e-26 106
MsG0280006546.01.T01 AT4G13310 42.857 133 69 3 88 216 366 495 2.37e-26 106
MsG0280006546.01.T01 AT5G42590 46.218 119 62 2 100 216 377 495 3.10e-26 105
MsG0280006546.01.T01 AT1G11610 43.636 110 61 1 100 208 377 486 3.99e-26 105
MsG0280006546.01.T01 AT3G53290 46.364 110 59 0 110 219 297 406 6.22e-26 104
MsG0280006546.01.T01 AT4G13290 37.500 176 99 6 46 216 319 488 6.70e-26 105
MsG0280006546.01.T01 AT5G07990 38.065 155 89 3 65 215 348 499 1.32e-25 104
MsG0280006546.01.T01 AT4G22690 44.340 106 56 1 110 215 443 545 1.44e-25 104
MsG0280006546.01.T01 AT4G22710 44.340 106 56 1 110 215 412 514 1.86e-25 103
MsG0280006546.01.T01 AT2G24180 41.379 116 63 1 100 215 385 495 1.22e-24 101
MsG0280006546.01.T01 AT4G12320 36.842 152 81 5 67 215 368 507 3.81e-24 100
MsG0280006546.01.T01 AT4G12310 37.584 149 78 5 70 215 373 509 3.84e-24 100
MsG0280006546.01.T01 AT5G44620 41.667 108 60 1 110 217 406 510 3.87e-24 100
MsG0280006546.01.T01 AT4G12300 38.667 150 77 5 69 215 368 505 1.10e-23 99.0
MsG0280006546.01.T01 AT3G53305 30.112 269 125 9 3 217 67 326 1.24e-23 97.1
MsG0280006546.01.T01 AT5G04330 34.524 168 100 4 51 216 343 502 1.26e-23 98.6
MsG0280006546.01.T01 AT3G52970 42.342 111 62 1 110 218 403 513 1.29e-23 98.6
MsG0280006546.01.T01 AT3G52970 42.342 111 62 1 110 218 417 527 1.34e-23 98.6
MsG0280006546.01.T01 AT4G20235 28.837 215 98 8 3 184 136 328 8.71e-23 94.7
MsG0280006546.01.T01 AT4G12330 31.868 182 108 3 42 217 338 509 3.14e-22 94.7
MsG0280006546.01.T01 AT2G40890 37.903 124 76 1 76 199 354 476 3.38e-20 89.0
MsG0280006546.01.T01 AT3G25180 39.316 117 62 2 109 219 400 513 1.18e-18 84.3
MsG0280006546.01.T01 AT2G25160 36.290 124 70 3 85 202 376 496 3.27e-18 83.2
MsG0280006546.01.T01 AT1G74550 41.489 94 53 1 109 202 373 464 2.24e-17 80.5
MsG0280006546.01.T01 AT4G37400 41.584 101 55 2 109 208 382 479 6.22e-17 79.3
MsG0280006546.01.T01 AT5G57220 40.404 99 51 2 109 207 382 472 6.56e-17 79.3
MsG0280006546.01.T01 AT1G74110 37.963 108 58 2 108 211 427 529 8.11e-17 79.0
MsG0280006546.01.T01 AT1G64950 47.872 94 45 3 119 211 410 500 1.15e-16 78.6
MsG0280006546.01.T01 AT2G42250 33.333 114 65 2 110 215 397 507 1.39e-16 78.6
MsG0280006546.01.T01 AT3G28740 41.000 100 51 2 109 208 395 486 1.74e-16 78.2
MsG0280006546.01.T01 AT1G64940 46.809 94 46 3 119 211 411 501 4.38e-16 77.0
MsG0280006546.01.T01 AT1G74540 39.560 91 53 1 109 199 379 467 1.13e-15 75.9
MsG0280006546.01.T01 AT4G37430 37.864 103 58 3 110 211 388 485 1.62e-15 75.1
MsG0280006546.01.T01 AT5G09970 38.462 104 60 2 109 211 428 528 1.68e-15 75.1
MsG0280006546.01.T01 AT1G13710 36.538 104 62 1 108 211 406 505 1.82e-15 75.1
MsG0280006546.01.T01 AT4G31970 37.838 111 63 2 109 216 407 514 3.25e-15 74.3
MsG0280006546.01.T01 AT1G66540 36.000 125 70 3 85 207 189 305 4.56e-15 73.2
MsG0280006546.01.T01 AT4G31940 37.838 111 63 2 109 216 408 515 4.58e-15 73.9
MsG0280006546.01.T01 AT4G31950 37.736 106 60 2 109 211 396 498 5.91e-15 73.6
MsG0280006546.01.T01 AT1G66540 36.000 125 70 3 85 207 248 364 7.30e-15 73.2
MsG0280006546.01.T01 AT1G01190 37.736 106 60 3 105 206 416 519 8.40e-15 73.2
MsG0280006546.01.T01 AT1G01190 37.736 106 60 3 105 206 421 524 9.18e-15 73.2
MsG0280006546.01.T01 AT5G10600 33.981 103 63 2 109 211 402 499 1.01e-14 72.8
MsG0280006546.01.T01 AT3G61880 37.037 108 62 3 108 211 417 522 1.35e-14 72.8
MsG0280006546.01.T01 AT4G37410 39.175 97 55 2 110 206 385 477 1.39e-14 72.4
MsG0280006546.01.T01 AT2G12190 45.833 96 46 4 119 211 410 502 1.54e-14 72.4
MsG0280006546.01.T01 AT3G61880 37.037 108 62 3 108 211 417 522 1.55e-14 72.4
MsG0280006546.01.T01 AT2G30490 31.852 135 81 3 70 202 361 486 2.62e-14 71.6
MsG0280006546.01.T01 AT5G67310 35.714 98 55 2 110 207 399 488 2.78e-14 71.6
MsG0280006546.01.T01 AT4G37340 34.127 126 73 3 85 208 361 478 4.12e-14 71.2
MsG0280006546.01.T01 AT1G64930 45.833 96 46 4 119 211 409 501 5.47e-14 70.9
MsG0280006546.01.T01 AT2G46660 36.111 108 62 3 108 211 417 521 6.77e-14 70.5
MsG0280006546.01.T01 AT5G10610 30.909 110 71 2 112 221 389 493 1.21e-13 69.7
MsG0280006546.01.T01 AT1G01280 33.058 121 69 3 108 221 393 508 1.55e-13 69.3
MsG0280006546.01.T01 AT1G64900 44.792 96 47 4 119 211 404 496 3.22e-13 68.6
MsG0280006546.01.T01 AT4G37330 36.000 100 56 2 108 207 383 474 3.66e-13 68.2
MsG0280006546.01.T01 AT3G03470 38.542 96 50 4 109 199 398 489 8.38e-13 67.4
MsG0280006546.01.T01 AT3G20100 33.846 130 66 4 85 203 372 492 8.55e-13 67.4
MsG0280006546.01.T01 AT4G37310 37.736 106 58 3 110 213 396 495 1.15e-12 67.0
MsG0280006546.01.T01 AT4G15350 32.432 111 66 2 100 205 382 488 1.28e-12 66.6
MsG0280006546.01.T01 AT3G20935 32.800 125 74 3 85 203 198 318 1.79e-12 65.9
MsG0280006546.01.T01 AT4G37320 34.314 102 59 2 110 211 388 481 3.77e-12 65.5
MsG0280006546.01.T01 AT5G61320 47.297 74 36 2 114 184 383 456 5.61e-12 64.7
MsG0280006546.01.T01 AT5G47990 33.333 105 59 2 91 184 373 477 6.59e-12 64.7
MsG0280006546.01.T01 AT5G06900 35.185 108 63 2 108 215 389 489 6.63e-12 64.7
MsG0280006546.01.T01 AT3G32047 32.075 106 64 3 85 184 371 474 1.88e-11 63.2
MsG0280006546.01.T01 AT5G36220 33.333 99 58 2 109 207 247 337 1.96e-11 63.2
MsG0280006546.01.T01 AT2G27010 32.653 98 57 2 110 202 374 467 2.00e-11 63.2
MsG0280006546.01.T01 AT5G36220 33.333 99 58 2 109 207 393 483 2.24e-11 63.2
MsG0280006546.01.T01 AT1G28430 35.802 81 47 1 109 184 395 475 5.10e-11 62.0
MsG0280006546.01.T01 AT3G10560 29.054 148 96 5 42 184 337 480 8.04e-11 61.6

Find 44 sgRNAs with CRISPR-Local

Find 112 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGAATTACTCATGAAAATT+TGG 0.141227 2:+3311319 MsG0280006546.01.T01:CDS
GCAAGAGGAAATTCTAAATT+AGG 0.204766 2:-3311260 None:intergenic
CTCCTTCACTCCAATACTTT+TGG 0.228573 2:-3311121 None:intergenic
TTAGATCATTCCAATCAATT+AGG 0.235352 2:+3309609 MsG0280006546.01.T01:CDS
TGCAATATAACATCATTTCT+AGG 0.288284 2:+3309714 MsG0280006546.01.T01:CDS
AGACAATCCATAAACCTTTC+AGG 0.311611 2:-3311155 None:intergenic
ATCATTTCTAGGGCAACTTT+TGG 0.338608 2:+3309725 MsG0280006546.01.T01:CDS
CCTCTTCCTCCCTAATTGAT+TGG 0.343861 2:-3309619 None:intergenic
TTGAAGAAAATTCATAAAAC+TGG 0.357443 2:+3309878 MsG0280006546.01.T01:CDS
TTTGATTGGGGACTTCCCTC+TGG 0.372950 2:+3311299 MsG0280006546.01.T01:CDS
TAGATCATTCCAATCAATTA+GGG 0.403993 2:+3309610 MsG0280006546.01.T01:CDS
TTGGATATGACTGAAGTCTT+TGG 0.407854 2:+3311338 MsG0280006546.01.T01:CDS
GACTGAAGTCTTTGGTGCTT+CGG 0.437453 2:+3311346 MsG0280006546.01.T01:CDS
TCTTTGGTGCTTCGGTGAAA+AGG 0.452866 2:+3311354 MsG0280006546.01.T01:CDS
TATAGTTTCCTTGATGAACT+TGG 0.456750 2:-3309777 None:intergenic
TTTGTGAATGGATGGGCAAT+AGG 0.474808 2:+3311092 MsG0280006546.01.T01:CDS
CATCAAGGAAACTATAAAGT+TGG 0.484417 2:+3309784 MsG0280006546.01.T01:CDS
GACCAAAAGTATTGGAGTGA+AGG 0.489569 2:+3311119 MsG0280006546.01.T01:CDS
ATTGTCTAGTTGATTACAAA+GGG 0.493763 2:+3311171 MsG0280006546.01.T01:CDS
CTCAAGTGTTTGTGAATGGA+TGG 0.499040 2:+3311084 MsG0280006546.01.T01:CDS
CCAATCAATTAGGGAGGAAG+AGG 0.507674 2:+3309619 MsG0280006546.01.T01:CDS
ACATTGGTACATGTGATTAG+TGG 0.508180 2:+3309842 MsG0280006546.01.T01:CDS
TAGGAAGAGACCAAAAGTAT+TGG 0.514238 2:+3311111 MsG0280006546.01.T01:CDS
GCAATATAACATCATTTCTA+GGG 0.524095 2:+3309715 MsG0280006546.01.T01:CDS
AATTTCATGAGTGAGGTTGA+TGG 0.535386 2:-3309684 None:intergenic
TAGTACAACAACTGAGCAAG+AGG 0.538741 2:-3311275 None:intergenic
ATTCTCCTTCCTGCACCAAA+AGG 0.539379 2:-3311212 None:intergenic
CTAATCACATGTACCAATGT+GGG 0.547990 2:-3309839 None:intergenic
GGTACATGATTGTAAAGACT+TGG 0.550370 2:-3311398 None:intergenic
GGAACTCAAGTGTTTGTGAA+TGG 0.558057 2:+3311080 MsG0280006546.01.T01:CDS
ATTTCATGAGTGAGGTTGAT+GGG 0.564716 2:-3309683 None:intergenic
AGATGTATTTCTATAAACAC+TGG 0.570350 2:+3309656 MsG0280006546.01.T01:CDS
AGCATATACCAAGTTCATCA+AGG 0.570543 2:+3309769 MsG0280006546.01.T01:CDS
TAGATAAAATTTCATGAGTG+AGG 0.574544 2:-3309691 None:intergenic
GGTTCAGCAAATGTGATACC+TGG 0.574744 2:-3311239 None:intergenic
ATCATTCCAATCAATTAGGG+AGG 0.608405 2:+3309613 MsG0280006546.01.T01:CDS
GGTACATGTGATTAGTGGAA+TGG 0.614898 2:+3309847 MsG0280006546.01.T01:CDS
GATTGTCTAGTTGATTACAA+AGG 0.615883 2:+3311170 MsG0280006546.01.T01:CDS
GCAGGAAGGAGAATATGTCC+AGG 0.621372 2:+3311221 MsG0280006546.01.T01:CDS
AATCACATGTACCAATGTGG+GGG 0.625678 2:-3309837 None:intergenic
ACTAATCACATGTACCAATG+TGG 0.627904 2:-3309840 None:intergenic
TAATCACATGTACCAATGTG+GGG 0.644147 2:-3309838 None:intergenic
TCAAGTGTTTGTGAATGGAT+GGG 0.648940 2:+3311085 MsG0280006546.01.T01:CDS
ATCACATGTACCAATGTGGG+GGG 0.662972 2:-3309836 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATACTAAAAAATGAAAT+AGG - Chr2:3310469-3310488 None:intergenic 10.0%
!! TAATACTAAAAAATGAAATA+GGG - Chr2:3310468-3310487 None:intergenic 10.0%
!!! CATTATTTATGATTTTAAAA+TGG - Chr2:3310589-3310608 None:intergenic 10.0%
!! TGAAATTTATTAACTAAACT+AGG + Chr2:3310123-3310142 MsG0280006546.01.T01:intron 15.0%
!! AAAAAAAAAACTTATCCACT+AGG + Chr2:3310639-3310658 MsG0280006546.01.T01:intron 20.0%
!! ATAATTAAAGAAACCTTAAG+TGG + Chr2:3310982-3311001 MsG0280006546.01.T01:intron 20.0%
!! GTAAATAATATTGTTCTACT+AGG - Chr2:3310753-3310772 None:intergenic 20.0%
!! TTGAAGAAAATTCATAAAAC+TGG + Chr2:3309878-3309897 MsG0280006546.01.T01:CDS 20.0%
!!! AGAAGTTTAAAATTCTTTGA+AGG - Chr2:3310727-3310746 None:intergenic 20.0%
!!! TCAGGTTAAAGATATTTTTT+GGG + Chr2:3310052-3310071 MsG0280006546.01.T01:intron 20.0%
!!! TTCAGGTTAAAGATATTTTT+TGG + Chr2:3310051-3310070 MsG0280006546.01.T01:intron 20.0%
! AACATCTTCAACATTAGAAT+GGG + Chr2:3310834-3310853 MsG0280006546.01.T01:intron 25.0%
! ATTGAAACTTGTGAGATTAA+TGG + Chr2:3311041-3311060 MsG0280006546.01.T01:intron 25.0%
! ATTGTCTAGTTGATTACAAA+GGG + Chr2:3311171-3311190 MsG0280006546.01.T01:CDS 25.0%
! GCAATATAACATCATTTCTA+GGG + Chr2:3309715-3309734 MsG0280006546.01.T01:CDS 25.0%
! TACACTTATTTATTGAGTAG+TGG - Chr2:3310517-3310536 None:intergenic 25.0%
! TAGATAAAATTTCATGAGTG+AGG - Chr2:3309694-3309713 None:intergenic 25.0%
! TAGATCATTCCAATCAATTA+GGG + Chr2:3309610-3309629 MsG0280006546.01.T01:CDS 25.0%
! TGCAATATAACATCATTTCT+AGG + Chr2:3309714-3309733 MsG0280006546.01.T01:CDS 25.0%
! TGGAATTACTCATGAAAATT+TGG + Chr2:3311319-3311338 MsG0280006546.01.T01:CDS 25.0%
! TTAGATCATTCCAATCAATT+AGG + Chr2:3309609-3309628 MsG0280006546.01.T01:CDS 25.0%
!! AGATGTATTTCTATAAACAC+TGG + Chr2:3309656-3309675 MsG0280006546.01.T01:CDS 25.0%
!! GGATATTTTGTTCTAGTATA+TGG - Chr2:3310321-3310340 None:intergenic 25.0%
!!! AAATGCTATTTCTCTAGAAA+AGG - Chr2:3310565-3310584 None:intergenic 25.0%
!!! AATTTTGAGTACATACCTTT+TGG + Chr2:3311197-3311216 MsG0280006546.01.T01:CDS 25.0%
!!! ACATGATTGTTTTTCATCTT+TGG + Chr2:3310204-3310223 MsG0280006546.01.T01:intron 25.0%
!!! AGTTGTTGTACTATTTTGAT+TGG + Chr2:3311285-3311304 MsG0280006546.01.T01:CDS 25.0%
!!! GTTGTTGTACTATTTTGATT+GGG + Chr2:3311286-3311305 MsG0280006546.01.T01:CDS 25.0%
!!! TTGTTGTACTATTTTGATTG+GGG + Chr2:3311287-3311306 MsG0280006546.01.T01:CDS 25.0%
AAAAAACTTATCCACTAGGT+AGG + Chr2:3310643-3310662 MsG0280006546.01.T01:intron 30.0%
AAAAAATGATGTCCTGTAAC+AGG - Chr2:3310803-3310822 None:intergenic 30.0%
AAAAACTTATCCACTAGGTA+GGG + Chr2:3310644-3310663 MsG0280006546.01.T01:intron 30.0%
ATCAATCTCATACGGTTTAA+AGG + Chr2:3310240-3310259 MsG0280006546.01.T01:intron 30.0%
ATCATTGAGACTCAAAAGAT+AGG - Chr2:3309973-3309992 None:intergenic 30.0%
ATGAAAAACAATCATGTCGA+TGG - Chr2:3310201-3310220 None:intergenic 30.0%
ATTGTCAAATGAAATCCATC+AGG - Chr2:3310011-3310030 None:intergenic 30.0%
CAACATCTTCAACATTAGAA+TGG + Chr2:3310833-3310852 MsG0280006546.01.T01:intron 30.0%
CAACATTAAAGCTGTTATTC+AGG + Chr2:3310034-3310053 MsG0280006546.01.T01:intron 30.0%
CATCAAGGAAACTATAAAGT+TGG + Chr2:3309784-3309803 MsG0280006546.01.T01:CDS 30.0%
GACTAAATTGTAGATTAGTG+CGG + Chr2:3310173-3310192 MsG0280006546.01.T01:intron 30.0%
GATTGTCTAGTTGATTACAA+AGG + Chr2:3311170-3311189 MsG0280006546.01.T01:CDS 30.0%
GCAAGAGGAAATTCTAAATT+AGG - Chr2:3311263-3311282 None:intergenic 30.0%
TAAGTCACATCAATCTCATA+CGG + Chr2:3310232-3310251 MsG0280006546.01.T01:intron 30.0%
TATAGTTTCCTTGATGAACT+TGG - Chr2:3309780-3309799 None:intergenic 30.0%
TTGTCAAATGAAATCCATCA+GGG - Chr2:3310010-3310029 None:intergenic 30.0%
! ATTTTCATGAGTAATTCCAG+AGG - Chr2:3311318-3311337 None:intergenic 30.0%
! CAACATTTTGTAGTAGTAGA+AGG - Chr2:3310342-3310361 None:intergenic 30.0%
! GTTTTATCCTGAAAGGTTTA+TGG + Chr2:3311148-3311167 MsG0280006546.01.T01:CDS 30.0%
! TTTTCATGAGTAATTCCAGA+GGG - Chr2:3311317-3311336 None:intergenic 30.0%
!! AACTTTTGGTGATAAATGCA+AGG + Chr2:3309739-3309758 MsG0280006546.01.T01:CDS 30.0%
!! GAGAAAAGTTTTATCCTGAA+AGG + Chr2:3311141-3311160 MsG0280006546.01.T01:CDS 30.0%
!! GCACAAGTTTGTTTTCATTA+TGG - Chr2:3310270-3310289 None:intergenic 30.0%
!!! TGTTACAGGACATCATTTTT+TGG + Chr2:3310802-3310821 MsG0280006546.01.T01:intron 30.0%
AAAAGGCTCAAGCAGAAATT+AGG + Chr2:3310893-3310912 MsG0280006546.01.T01:intron 35.0%
AAACAAAGAGTGATGAGAGA+TGG + Chr2:3309936-3309955 MsG0280006546.01.T01:intron 35.0%
AATTTCATGAGTGAGGTTGA+TGG - Chr2:3309687-3309706 None:intergenic 35.0%
ACATTGGTACATGTGATTAG+TGG + Chr2:3309842-3309861 MsG0280006546.01.T01:CDS 35.0%
ACTAATCACATGTACCAATG+TGG - Chr2:3309843-3309862 None:intergenic 35.0%
AGACAATCCATAAACCTTTC+AGG - Chr2:3311158-3311177 None:intergenic 35.0%
AGCATATACCAAGTTCATCA+AGG + Chr2:3309769-3309788 MsG0280006546.01.T01:CDS 35.0%
ATCATTCCAATCAATTAGGG+AGG + Chr2:3309613-3309632 MsG0280006546.01.T01:CDS 35.0%
CAAGTTTCAATACACTCTCT+TGG - Chr2:3311032-3311051 None:intergenic 35.0%
CTAATCACATGTACCAATGT+GGG - Chr2:3309842-3309861 None:intergenic 35.0%
GGTACATGATTGTAAAGACT+TGG - Chr2:3311401-3311420 None:intergenic 35.0%
TAATCACATGTACCAATGTG+GGG - Chr2:3309841-3309860 None:intergenic 35.0%
TCAAGTGTTTGTGAATGGAT+GGG + Chr2:3311085-3311104 MsG0280006546.01.T01:CDS 35.0%
TTGGATATGACTGAAGTCTT+TGG + Chr2:3311338-3311357 MsG0280006546.01.T01:CDS 35.0%
! AAACCCTAGAGTGCTAAAAA+AGG + Chr2:3310876-3310895 MsG0280006546.01.T01:intron 35.0%
! ATTTCATGAGTGAGGTTGAT+GGG - Chr2:3309686-3309705 None:intergenic 35.0%
! GCAGAAATTAGGCAAGTTTT+TGG + Chr2:3310904-3310923 MsG0280006546.01.T01:intron 35.0%
! TAGGAAGAGACCAAAAGTAT+TGG + Chr2:3311111-3311130 MsG0280006546.01.T01:CDS 35.0%
!! CTTTTGAGTCTCAATGATCA+TGG + Chr2:3309975-3309994 MsG0280006546.01.T01:intron 35.0%
!!! ATCATTTCTAGGGCAACTTT+TGG + Chr2:3309725-3309744 MsG0280006546.01.T01:CDS 35.0%
AAATCTCACTCACCTGTTAC+AGG + Chr2:3310788-3310807 MsG0280006546.01.T01:intron 40.0%
AATCACATGTACCAATGTGG+GGG - Chr2:3309840-3309859 None:intergenic 40.0%
AATGGATACACAATACCAGC+TGG + Chr2:3311059-3311078 MsG0280006546.01.T01:intron 40.0%
AGTAGTGGCAACTACAAGTT+GGG - Chr2:3310502-3310521 None:intergenic 40.0%
CAAATGAAATCCATCAGGGT+TGG - Chr2:3310006-3310025 None:intergenic 40.0%
CTCAAGTGTTTGTGAATGGA+TGG + Chr2:3311084-3311103 MsG0280006546.01.T01:CDS 40.0%
GCTTCGGTGAAAAGGAAAAA+TGG + Chr2:3311362-3311381 MsG0280006546.01.T01:CDS 40.0%
GGAACTCAAGTGTTTGTGAA+TGG + Chr2:3311080-3311099 MsG0280006546.01.T01:CDS 40.0%
GGTACATGTGATTAGTGGAA+TGG + Chr2:3309847-3309866 MsG0280006546.01.T01:CDS 40.0%
GTAATAGTAGAGGACTAGGA+GGG - Chr2:3311010-3311029 None:intergenic 40.0%
TAGTACAACAACTGAGCAAG+AGG - Chr2:3311278-3311297 None:intergenic 40.0%
TTTGTGAATGGATGGGCAAT+AGG + Chr2:3311092-3311111 MsG0280006546.01.T01:CDS 40.0%
! CACTCTCTTGGTAATAGTAG+AGG - Chr2:3311020-3311039 None:intergenic 40.0%
! CTCCTTCACTCCAATACTTT+TGG - Chr2:3311124-3311143 None:intergenic 40.0%
! CTTGGTAATAGTAGAGGACT+AGG - Chr2:3311014-3311033 None:intergenic 40.0%
!! AGGCAAGTTTTTGGAAGTAG+AGG + Chr2:3310913-3310932 MsG0280006546.01.T01:intron 40.0%
!! GACCAAAAGTATTGGAGTGA+AGG + Chr2:3311119-3311138 MsG0280006546.01.T01:CDS 40.0%
!! TAATTTGTTTCCCCCCACAT+TGG + Chr2:3309826-3309845 MsG0280006546.01.T01:CDS 40.0%
!!! GAGCCTTTTTTAGCACTCTA+GGG - Chr2:3310882-3310901 None:intergenic 40.0%
!!! TGAGCCTTTTTTAGCACTCT+AGG - Chr2:3310883-3310902 None:intergenic 40.0%
ACAAACACTTGAGTTCCAGC+TGG - Chr2:3311077-3311096 None:intergenic 45.0%
ACTTATCCACTAGGTAGGGT+TGG + Chr2:3310648-3310667 MsG0280006546.01.T01:intron 45.0%
ATCACATGTACCAATGTGGG+GGG - Chr2:3309839-3309858 None:intergenic 45.0%
ATTCTCCTTCCTGCACCAAA+AGG - Chr2:3311215-3311234 None:intergenic 45.0%
CCAATCAATTAGGGAGGAAG+AGG + Chr2:3309619-3309638 MsG0280006546.01.T01:CDS 45.0%
CCTCTTCCTCCCTAATTGAT+TGG - Chr2:3309622-3309641 None:intergenic 45.0%
GAGTAGTGGCAACTACAAGT+TGG - Chr2:3310503-3310522 None:intergenic 45.0%
GGTAATAGTAGAGGACTAGG+AGG - Chr2:3311011-3311030 None:intergenic 45.0%
GGTTCAGCAAATGTGATACC+TGG - Chr2:3311242-3311261 None:intergenic 45.0%
!! ACATACCTTTTGGTGCAGGA+AGG + Chr2:3311207-3311226 MsG0280006546.01.T01:CDS 45.0%
!! GACTGAAGTCTTTGGTGCTT+CGG + Chr2:3311346-3311365 MsG0280006546.01.T01:CDS 45.0%
!! GAGTACATACCTTTTGGTGC+AGG + Chr2:3311203-3311222 MsG0280006546.01.T01:CDS 45.0%
!! TCTTTGGTGCTTCGGTGAAA+AGG + Chr2:3311354-3311373 MsG0280006546.01.T01:CDS 45.0%
!!! ATTTTTTTTTTTTAAAGTTA+AGG + Chr2:3310096-3310115 MsG0280006546.01.T01:intron 5.0%
GCAGGAAGGAGAATATGTCC+AGG + Chr2:3311221-3311240 MsG0280006546.01.T01:CDS 50.0%
TTCATGCCAACCCTACCTAG+TGG - Chr2:3310657-3310676 None:intergenic 50.0%
TTTGATTGGGGACTTCCCTC+TGG + Chr2:3311299-3311318 MsG0280006546.01.T01:CDS 50.0%
CATGGCTCTTCCAACCCTGA+TGG + Chr2:3309993-3310012 MsG0280006546.01.T01:intron 55.0%
!! GACTAGGAGGGTGCCACTTA+AGG - Chr2:3310998-3311017 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
Chr2 gene 3309578 3311430 3309578 ID=MsG0280006546.01;Name=MsG0280006546.01
Chr2 mRNA 3309578 3311430 3309578 ID=MsG0280006546.01.T01;Parent=MsG0280006546.01;Name=MsG0280006546.01.T01;_AED=0.41;_eAED=0.42;_QI=0|0|0|1|1|1|2|0|224
Chr2 exon 3309578 3309899 3309578 ID=MsG0280006546.01.T01:exon:1637;Parent=MsG0280006546.01.T01
Chr2 exon 3311078 3311430 3311078 ID=MsG0280006546.01.T01:exon:1638;Parent=MsG0280006546.01.T01
Chr2 CDS 3309578 3309899 3309578 ID=MsG0280006546.01.T01:cds;Parent=MsG0280006546.01.T01
Chr2 CDS 3311078 3311430 3311078 ID=MsG0280006546.01.T01:cds;Parent=MsG0280006546.01.T01
Gene Sequence

>MsG0280006546.01.T01

ATGCACATTAGAATTGTGAGTGCTAAACGTGTTAGATCATTCCAATCAATTAGGGAGGAAGAGGTGTCAAATTTAATAAGATGTATTTCTATAAACACTGGATCACCCATCAACCTCACTCATGAAATTTTATCTATGCAATATAACATCATTTCTAGGGCAACTTTTGGTGATAAATGCAAGGAGCAAGAAGCATATACCAAGTTCATCAAGGAAACTATAAAGTTGGCAGAGAGTTTCAGTGTCACTAATTTGTTTCCCCCCACATTGGTACATGTGATTAGTGGAATGGTGCGTAAATTGAAGAAAATTCATAAAACTGCTGGAACTCAAGTGTTTGTGAATGGATGGGCAATAGGAAGAGACCAAAAGTATTGGAGTGAAGGAGAAAAGTTTTATCCTGAAAGGTTTATGGATTGTCTAGTTGATTACAAAGGGTCTAATTTTGAGTACATACCTTTTGGTGCAGGAAGGAGAATATGTCCAGGTATCACATTTGCTGAACCTAATTTAGAATTTCCTCTTGCTCAGTTGTTGTACTATTTTGATTGGGGACTTCCCTCTGGAATTACTCATGAAAATTTGGATATGACTGAAGTCTTTGGTGCTTCGGTGAAAAGGAAAAATGGTCTATTCTTAATTCCAAGTCTTTACAATCATGTACCTCTTGAATAA

Protein sequence

>MsG0280006546.01.T01

MHIRIVSAKRVRSFQSIREEEVSNLIRCISINTGSPINLTHEILSMQYNIISRATFGDKCKEQEAYTKFIKETIKLAESFSVTNLFPPTLVHVISGMVRKLKKIHKTAGTQVFVNGWAIGRDQKYWSEGEKFYPERFMDCLVDYKGSNFEYIPFGAGRRICPGITFAEPNLEFPLAQLLYYFDWGLPSGITHENLDMTEVFGASVKRKNGLFLIPSLYNHVPLE*