Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680035765.01.T01 | XP_013453160.1 | 96.721 | 122 | 4 | 0 | 1 | 122 | 1 | 122 | 4.56E-81 | 246 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680035765.01.T01 | A0A072UDJ5 | 96.721 | 122 | 4 | 0 | 1 | 122 | 1 | 122 | 2.18e-81 | 246 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047791.01 | MsG0680035765.01 | 0.847218 | 1.328822e-59 | 2.345155e-56 |
| MsG0080048152.01 | MsG0680035765.01 | 0.822822 | 1.928713e-53 | 1.632103e-50 |
| MsG0080048761.01 | MsG0680035765.01 | -0.834772 | 2.470896e-56 | 2.961420e-53 |
| MsG0080048849.01 | MsG0680035765.01 | 0.828841 | 7.185784e-55 | 7.225710e-52 |
| MsG0080048878.01 | MsG0680035765.01 | 0.849819 | 2.530573e-60 | 4.857394e-57 |
| MsG0080049011.01 | MsG0680035765.01 | 0.818968 | 1.485938e-52 | 1.128797e-49 |
| MsG0080049069.01 | MsG0680035765.01 | 0.816687 | 4.863281e-52 | 3.469476e-49 |
| MsG0180000026.01 | MsG0680035765.01 | 0.812011 | 5.254572e-51 | 3.302509e-48 |
| MsG0180000113.01 | MsG0680035765.01 | 0.802961 | 4.374630e-49 | 2.171651e-46 |
| MsG0180000205.01 | MsG0680035765.01 | 0.835758 | 1.392679e-56 | 1.719451e-53 |
| MsG0180000355.01 | MsG0680035765.01 | 0.849538 | 3.033441e-60 | 5.768454e-57 |
| MsG0180000384.01 | MsG0680035765.01 | 0.841213 | 5.446522e-58 | 7.946227e-55 |
| MsG0180000790.01 | MsG0680035765.01 | 0.846915 | 1.608731e-59 | 2.811797e-56 |
| MsG0180001118.01 | MsG0680035765.01 | 0.827061 | 1.926471e-54 | 1.839426e-51 |
| MsG0180003124.01 | MsG0680035765.01 | 0.831163 | 1.950214e-55 | 2.099055e-52 |
| MsG0180003189.01 | MsG0680035765.01 | 0.801061 | 1.075334e-48 | 5.087082e-46 |
| MsG0180003697.01 | MsG0680035765.01 | 0.849813 | 2.541316e-60 | 4.877010e-57 |
| MsG0180003821.01 | MsG0680035765.01 | 0.826760 | 2.272759e-54 | 2.151044e-51 |
| MsG0180004046.01 | MsG0680035765.01 | 0.834514 | 2.869085e-56 | 3.412770e-53 |
| MsG0180004293.01 | MsG0680035765.01 | -0.827216 | 1.768188e-54 | 1.696030e-51 |
| MsG0180004493.01 | MsG0680035765.01 | 0.814785 | 1.290672e-51 | 8.741624e-49 |
| MsG0180004605.01 | MsG0680035765.01 | -0.806598 | 7.609093e-50 | 4.146912e-47 |
| MsG0180004750.01 | MsG0680035765.01 | 0.836102 | 1.139119e-56 | 1.421181e-53 |
| MsG0180005169.01 | MsG0680035765.01 | 0.815378 | 9.530654e-52 | 6.560140e-49 |
| MsG0180005303.01 | MsG0680035765.01 | -0.811555 | 6.603643e-51 | 4.100328e-48 |
| MsG0180005334.01 | MsG0680035765.01 | 0.822798 | 1.953480e-53 | 1.651870e-50 |
| MsG0180005397.01 | MsG0680035765.01 | 0.817080 | 3.969450e-52 | 2.862524e-49 |
| MsG0180005424.01 | MsG0680035765.01 | 0.814885 | 1.226703e-51 | 8.330444e-49 |
| MsG0180005509.01 | MsG0680035765.01 | 0.812190 | 4.801625e-51 | 3.032753e-48 |
| MsG0180005787.01 | MsG0680035765.01 | 0.838932 | 2.143846e-57 | 2.915002e-54 |
| MsG0180005913.01 | MsG0680035765.01 | 0.811523 | 6.708512e-51 | 4.162051e-48 |
| MsG0180005990.01 | MsG0680035765.01 | 0.810183 | 1.308408e-50 | 7.833886e-48 |
| MsG0180006096.01 | MsG0680035765.01 | 0.859359 | 4.369630e-63 | 1.150979e-59 |
| MsG0180006144.01 | MsG0680035765.01 | 0.801149 | 1.031732e-48 | 4.891546e-46 |
| MsG0280006306.01 | MsG0680035765.01 | -0.846778 | 1.753822e-59 | 3.052162e-56 |
| MsG0280010595.01 | MsG0680035765.01 | 0.851894 | 6.591528e-61 | 1.353562e-57 |
| MsG0280010776.01 | MsG0680035765.01 | 0.823169 | 1.600516e-53 | 1.367679e-50 |
| MsG0280011304.01 | MsG0680035765.01 | 0.826441 | 2.708014e-54 | 2.539924e-51 |
| MsG0280011371.01 | MsG0680035765.01 | 0.807576 | 4.724681e-50 | 2.640893e-47 |
| MsG0380011581.01 | MsG0680035765.01 | 0.808560 | 2.917143e-50 | 1.673241e-47 |
| MsG0380011704.01 | MsG0680035765.01 | 0.820932 | 5.280559e-53 | 4.236184e-50 |
| MsG0380011844.01 | MsG0680035765.01 | 0.809779 | 1.598798e-50 | 9.472781e-48 |
| MsG0380012122.01 | MsG0680035765.01 | 0.808709 | 2.710719e-50 | 1.560849e-47 |
| MsG0380012374.01 | MsG0680035765.01 | 0.809702 | 1.660526e-50 | 9.818194e-48 |
| MsG0380012570.01 | MsG0680035765.01 | 0.859758 | 3.313152e-63 | 8.847334e-60 |
| MsG0380013467.01 | MsG0680035765.01 | 0.803857 | 2.853604e-49 | 1.449569e-46 |
| MsG0680030764.01 | MsG0680035765.01 | 0.806506 | 7.959832e-50 | 4.327842e-47 |
| MsG0680031000.01 | MsG0680035765.01 | 0.834731 | 2.529631e-56 | 3.027956e-53 |
| MsG0680031334.01 | MsG0680035765.01 | 0.817533 | 3.138793e-52 | 2.291773e-49 |
| MsG0680031468.01 | MsG0680035765.01 | 0.828310 | 9.655095e-55 | 9.560569e-52 |
| MsG0680031628.01 | MsG0680035765.01 | 0.803112 | 4.072467e-49 | 2.029363e-46 |
| MsG0680031939.01 | MsG0680035765.01 | 0.823842 | 1.114015e-53 | 9.702706e-51 |
| MsG0680031967.01 | MsG0680035765.01 | 0.804897 | 1.732965e-49 | 9.042609e-47 |
| MsG0680032510.01 | MsG0680035765.01 | -0.828746 | 7.572712e-55 | 7.594046e-52 |
| MsG0680032762.01 | MsG0680035765.01 | 0.801090 | 1.060892e-48 | 5.022502e-46 |
| MsG0680032827.01 | MsG0680035765.01 | 0.805802 | 1.119795e-49 | 5.980036e-47 |
| MsG0680032830.01 | MsG0680035765.01 | 0.825962 | 3.520161e-54 | 3.256998e-51 |
| MsG0680033459.01 | MsG0680035765.01 | 0.831369 | 1.735478e-55 | 1.879452e-52 |
| MsG0680034445.01 | MsG0680035765.01 | 0.800991 | 1.111228e-48 | 5.247777e-46 |
| MsG0480018584.01 | MsG0680035765.01 | 0.802488 | 5.478723e-49 | 2.687092e-46 |
| MsG0480018847.01 | MsG0680035765.01 | 0.835757 | 1.393203e-56 | 1.720080e-53 |
| MsG0480018850.01 | MsG0680035765.01 | 0.827948 | 1.179985e-54 | 1.156231e-51 |
| MsG0480018911.01 | MsG0680035765.01 | 0.850287 | 1.872398e-60 | 3.649579e-57 |
| MsG0480019007.01 | MsG0680035765.01 | 0.812781 | 3.566064e-51 | 2.287843e-48 |
| MsG0480019380.01 | MsG0680035765.01 | 0.816059 | 6.722474e-52 | 4.714456e-49 |
| MsG0480019562.01 | MsG0680035765.01 | 0.801221 | 9.974249e-49 | 4.737298e-46 |
| MsG0480020024.01 | MsG0680035765.01 | 0.827272 | 1.714801e-54 | 1.647551e-51 |
| MsG0480021037.01 | MsG0680035765.01 | 0.818818 | 1.607159e-52 | 1.215669e-49 |
| MsG0480021280.01 | MsG0680035765.01 | 0.830164 | 3.425874e-55 | 3.581028e-52 |
| MsG0480021706.01 | MsG0680035765.01 | 0.837257 | 5.784757e-57 | 7.471524e-54 |
| MsG0480021735.01 | MsG0680035765.01 | 0.808923 | 2.439319e-50 | 1.412572e-47 |
| MsG0480021768.01 | MsG0680035765.01 | 0.841504 | 4.566056e-58 | 6.723160e-55 |
| MsG0480021776.01 | MsG0680035765.01 | -0.862958 | 3.503364e-64 | 1.044653e-60 |
| MsG0480022672.01 | MsG0680035765.01 | 0.834608 | 2.716651e-56 | 3.240374e-53 |
| MsG0480022780.01 | MsG0680035765.01 | 0.831103 | 2.018049e-55 | 2.168229e-52 |
| MsG0480023061.01 | MsG0680035765.01 | 0.800616 | 1.325470e-48 | 6.199750e-46 |
| MsG0480023162.01 | MsG0680035765.01 | 0.860077 | 2.656155e-63 | 7.171988e-60 |
| MsG0480023384.01 | MsG0680035765.01 | 0.820942 | 5.254835e-53 | 4.216627e-50 |
| MsG0480023448.01 | MsG0680035765.01 | 0.812294 | 4.557076e-51 | 2.886387e-48 |
| MsG0480023652.01 | MsG0680035765.01 | 0.871221 | 8.062365e-67 | 3.226766e-63 |
| MsG0480023660.01 | MsG0680035765.01 | 0.841912 | 3.564158e-58 | 5.314848e-55 |
| MsG0480023814.01 | MsG0680035765.01 | 0.802740 | 4.859760e-49 | 2.399032e-46 |
| MsG0480023867.01 | MsG0680035765.01 | 0.827225 | 1.759360e-54 | 1.687991e-51 |
| MsG0580024051.01 | MsG0680035765.01 | 0.807734 | 4.373128e-50 | 2.454651e-47 |
| MsG0580024084.01 | MsG0680035765.01 | 0.805390 | 1.366348e-49 | 7.219586e-47 |
| MsG0580024161.01 | MsG0680035765.01 | 0.825664 | 4.144718e-54 | 3.802309e-51 |
| MsG0580024495.01 | MsG0680035765.01 | 0.802124 | 6.510617e-49 | 3.163714e-46 |
| MsG0580024619.01 | MsG0680035765.01 | 0.853655 | 2.070487e-61 | 4.505967e-58 |
| MsG0580024727.01 | MsG0680035765.01 | 0.801987 | 6.947798e-49 | 3.364381e-46 |
| MsG0580024775.01 | MsG0680035765.01 | 0.806911 | 6.535300e-50 | 3.590525e-47 |
| MsG0580025268.01 | MsG0680035765.01 | 0.831457 | 1.651525e-55 | 1.793273e-52 |
| MsG0580025363.01 | MsG0680035765.01 | -0.815183 | 1.053207e-51 | 7.210345e-49 |
| MsG0580025467.01 | MsG0680035765.01 | 0.804118 | 2.518905e-49 | 1.288121e-46 |
| MsG0580025756.01 | MsG0680035765.01 | 0.842987 | 1.848068e-58 | 2.850244e-55 |
| MsG0380015027.01 | MsG0680035765.01 | 0.817489 | 3.210928e-52 | 2.341725e-49 |
| MsG0380015066.01 | MsG0680035765.01 | -0.802472 | 5.521458e-49 | 2.706984e-46 |
| MsG0380015216.01 | MsG0680035765.01 | 0.829304 | 5.547409e-55 | 5.656537e-52 |
| MsG0380015466.01 | MsG0680035765.01 | 0.810508 | 1.113131e-50 | 6.722236e-48 |
| MsG0380015703.01 | MsG0680035765.01 | 0.833210 | 6.078807e-56 | 6.953100e-53 |
| MsG0380015849.01 | MsG0680035765.01 | -0.801163 | 1.025022e-48 | 4.861400e-46 |
| MsG0380016347.01 | MsG0680035765.01 | -0.812113 | 4.992503e-51 | 3.146479e-48 |
| MsG0380016560.01 | MsG0680035765.01 | 0.830609 | 2.666812e-55 | 2.823812e-52 |
| MsG0380016671.01 | MsG0680035765.01 | 0.801509 | 8.705931e-49 | 4.165155e-46 |
| MsG0380016820.01 | MsG0680035765.01 | 0.825636 | 4.208651e-54 | 3.857790e-51 |
| MsG0380017022.01 | MsG0680035765.01 | 0.802560 | 5.294532e-49 | 2.601513e-46 |
| MsG0380017023.01 | MsG0680035765.01 | 0.862723 | 4.139293e-64 | 1.224471e-60 |
| MsG0380017085.01 | MsG0680035765.01 | 0.832535 | 8.944660e-56 | 1.002659e-52 |
| MsG0380017126.01 | MsG0680035765.01 | 0.806705 | 7.226305e-50 | 3.948998e-47 |
| MsG0380017878.01 | MsG0680035765.01 | -0.807474 | 4.966179e-50 | 2.768744e-47 |
| MsG0380018022.01 | MsG0680035765.01 | 0.808067 | 3.714929e-50 | 2.103454e-47 |
| MsG0380018033.01 | MsG0680035765.01 | 0.825426 | 4.718522e-54 | 4.299139e-51 |
| MsG0480018214.01 | MsG0680035765.01 | 0.833086 | 6.524456e-56 | 7.435697e-53 |
| MsG0480018402.01 | MsG0680035765.01 | 0.826712 | 2.333348e-54 | 2.205342e-51 |
| MsG0480018426.01 | MsG0680035765.01 | 0.806011 | 1.011904e-49 | 5.433029e-47 |
| MsG0580026175.01 | MsG0680035765.01 | 0.801906 | 7.219327e-49 | 3.488807e-46 |
| MsG0580026206.01 | MsG0680035765.01 | 0.810722 | 1.000812e-50 | 6.078840e-48 |
| MsG0580026301.01 | MsG0680035765.01 | 0.823426 | 1.393749e-53 | 1.199594e-50 |
| MsG0580026439.01 | MsG0680035765.01 | 0.803616 | 3.202290e-49 | 1.616603e-46 |
| MsG0580026485.01 | MsG0680035765.01 | 0.834322 | 3.204326e-56 | 3.789900e-53 |
| MsG0580026718.01 | MsG0680035765.01 | 0.809614 | 1.734744e-50 | 1.023379e-47 |
| MsG0580027103.01 | MsG0680035765.01 | 0.813948 | 1.976478e-51 | 1.308651e-48 |
| MsG0580028033.01 | MsG0680035765.01 | 0.826410 | 2.754631e-54 | 2.581421e-51 |
| MsG0580028044.01 | MsG0680035765.01 | 0.800838 | 1.194222e-48 | 5.617507e-46 |
| MsG0580028570.01 | MsG0680035765.01 | 0.807274 | 5.476244e-50 | 3.037258e-47 |
| MsG0580028582.01 | MsG0680035765.01 | 0.824738 | 6.859671e-54 | 6.129382e-51 |
| MsG0580028597.01 | MsG0680035765.01 | 0.810546 | 1.092375e-50 | 6.603406e-48 |
| MsG0580028630.01 | MsG0680035765.01 | 0.843931 | 1.033960e-58 | 1.643149e-55 |
| MsG0580028754.01 | MsG0680035765.01 | 0.819206 | 1.311728e-52 | 1.002909e-49 |
| MsG0580029514.01 | MsG0680035765.01 | -0.818096 | 2.342139e-52 | 1.736621e-49 |
| MsG0580029717.01 | MsG0680035765.01 | 0.862173 | 6.114008e-64 | 1.774139e-60 |
| MsG0580029879.01 | MsG0680035765.01 | 0.828114 | 1.076102e-54 | 1.059620e-51 |
| MsG0580029924.01 | MsG0680035765.01 | 0.823572 | 1.288513e-53 | 1.113660e-50 |
| MsG0580030010.01 | MsG0680035765.01 | 0.814109 | 1.821322e-51 | 1.211207e-48 |
| MsG0680030350.01 | MsG0680035765.01 | 0.842675 | 2.237544e-58 | 3.417533e-55 |
| MsG0680030515.01 | MsG0680035765.01 | 0.807104 | 5.948894e-50 | 3.284626e-47 |
| MsG0680030555.01 | MsG0680035765.01 | 0.845702 | 3.443904e-59 | 5.789066e-56 |
| MsG0680030636.01 | MsG0680035765.01 | 0.826248 | 3.011278e-54 | 2.808808e-51 |
| MsG0280007062.01 | MsG0680035765.01 | 0.810576 | 1.076084e-50 | 6.510414e-48 |
| MsG0280007193.01 | MsG0680035765.01 | -0.828313 | 9.635863e-55 | 9.542554e-52 |
| MsG0280007575.01 | MsG0680035765.01 | 0.816306 | 5.919492e-52 | 4.179624e-49 |
| MsG0280007847.01 | MsG0680035765.01 | 0.837178 | 6.059094e-57 | 7.807905e-54 |
| MsG0280007903.01 | MsG0680035765.01 | 0.812349 | 4.432496e-51 | 2.811674e-48 |
| MsG0280008429.01 | MsG0680035765.01 | 0.827350 | 1.642566e-54 | 1.581882e-51 |
| MsG0280008928.01 | MsG0680035765.01 | 0.820234 | 7.640188e-53 | 6.010987e-50 |
| MsG0280008929.01 | MsG0680035765.01 | 0.841900 | 3.588820e-58 | 5.349640e-55 |
| MsG0280009054.01 | MsG0680035765.01 | 0.814820 | 1.268125e-51 | 8.597001e-49 |
| MsG0280009256.01 | MsG0680035765.01 | 0.803579 | 3.259581e-49 | 1.644046e-46 |
| MsG0280009353.01 | MsG0680035765.01 | 0.819355 | 1.213363e-52 | 9.314696e-50 |
| MsG0280009685.01 | MsG0680035765.01 | 0.850069 | 2.155050e-60 | 4.170853e-57 |
| MsG0280010013.01 | MsG0680035765.01 | 0.822944 | 1.806407e-53 | 1.533860e-50 |
| MsG0280010082.01 | MsG0680035765.01 | 0.806300 | 8.794323e-50 | 4.756513e-47 |
| MsG0280010288.01 | MsG0680035765.01 | 0.838432 | 2.886612e-57 | 3.865673e-54 |
| MsG0280010434.01 | MsG0680035765.01 | 0.804956 | 1.683658e-49 | 8.798412e-47 |
| MsG0280010532.01 | MsG0680035765.01 | -0.805949 | 1.042717e-49 | 5.589478e-47 |
| MsG0680035765.01 | MsG0680035877.01 | 0.834546 | 2.815423e-56 | 3.352141e-53 |
| MsG0680035765.01 | MsG0780035960.01 | 0.804139 | 2.493741e-49 | 1.275932e-46 |
| MsG0680035765.01 | MsG0780036071.01 | 0.816601 | 5.084024e-52 | 3.618506e-49 |
| MsG0680035765.01 | MsG0780036186.01 | 0.820604 | 6.283114e-53 | 4.994000e-50 |
| MsG0680035765.01 | MsG0780036544.01 | -0.836212 | 1.067872e-56 | 1.336887e-53 |
| MsG0680035765.01 | MsG0780036659.01 | 0.825619 | 4.247107e-54 | 3.891219e-51 |
| MsG0680035765.01 | MsG0780037082.01 | 0.824205 | 9.158775e-54 | 8.058608e-51 |
| MsG0680035765.01 | MsG0780037157.01 | 0.800186 | 1.622165e-48 | 7.504896e-46 |
| MsG0680035765.01 | MsG0780037330.01 | 0.834182 | 3.473899e-56 | 4.090568e-53 |
| MsG0680035765.01 | MsG0780038309.01 | -0.806703 | 7.230732e-50 | 3.951297e-47 |
| MsG0680035765.01 | MsG0780038892.01 | 0.804208 | 2.411691e-49 | 1.236115e-46 |
| MsG0680035765.01 | MsG0780039439.01 | 0.814816 | 1.270916e-51 | 8.614959e-49 |
| MsG0680035765.01 | MsG0780040566.01 | -0.828210 | 1.020447e-54 | 1.007603e-51 |
| MsG0680035765.01 | MsG0780041137.01 | 0.821114 | 4.795416e-53 | 3.866428e-50 |
| MsG0680035765.01 | MsG0780041223.01 | 0.812967 | 3.248116e-51 | 2.094097e-48 |
| MsG0680035765.01 | MsG0780041268.01 | 0.841852 | 3.694819e-58 | 5.499712e-55 |
| MsG0680035765.01 | MsG0780041440.01 | 0.803041 | 4.212350e-49 | 2.095278e-46 |
| MsG0680035765.01 | MsG0780041729.01 | -0.833280 | 5.837802e-56 | 6.691178e-53 |
| MsG0680035765.01 | MsG0780041747.01 | 0.839194 | 1.833400e-57 | 2.512961e-54 |
| MsG0680035765.01 | MsG0880042033.01 | 0.818642 | 1.762328e-52 | 1.326543e-49 |
| MsG0680035765.01 | MsG0880042062.01 | 0.821120 | 4.779598e-53 | 3.854364e-50 |
| MsG0680035765.01 | MsG0880042134.01 | 0.858477 | 8.022384e-63 | 2.050199e-59 |
| MsG0680035765.01 | MsG0880042857.01 | 0.834152 | 3.535622e-56 | 4.159429e-53 |
| MsG0680035765.01 | MsG0880042987.01 | -0.809231 | 2.095767e-50 | 1.223759e-47 |
| MsG0680035765.01 | MsG0880043749.01 | 0.821923 | 3.119332e-53 | 2.572757e-50 |
| MsG0680035765.01 | MsG0880043867.01 | 0.815495 | 8.979711e-52 | 6.200999e-49 |
| MsG0680035765.01 | MsG0880044005.01 | 0.808570 | 2.902055e-50 | 1.665043e-47 |
| MsG0680035765.01 | MsG0880044142.01 | 0.811532 | 6.678130e-51 | 4.144205e-48 |
| MsG0680035765.01 | MsG0880044394.01 | 0.821575 | 3.753779e-53 | 3.065568e-50 |
| MsG0680035765.01 | MsG0880044975.01 | 0.833720 | 4.534910e-56 | 5.266428e-53 |
| MsG0680035765.01 | MsG0880045480.01 | -0.830312 | 3.152735e-55 | 3.309430e-52 |
| MsG0680035765.01 | MsG0880045684.01 | 0.820595 | 6.312272e-53 | 5.015921e-50 |
| MsG0680035765.01 | MsG0880046377.01 | 0.837133 | 6.219974e-57 | 8.004190e-54 |
| MsG0680035765.01 | MsG0880046517.01 | 0.845941 | 2.966940e-59 | 5.025557e-56 |
| MsG0680035765.01 | MsG0880046569.01 | -0.800319 | 1.523807e-48 | 7.074062e-46 |
| MsG0680035765.01 | MsG0880046963.01 | -0.825409 | 4.762641e-54 | 4.337348e-51 |
| MsG0680035765.01 | MsG0880047046.01 | 0.801324 | 9.502899e-49 | 4.525164e-46 |
| MsG0680035765.01 | MsG0880047052.01 | 0.812691 | 3.733268e-51 | 2.389585e-48 |
| MsG0680035765.01 | MsG0880047212.01 | 0.849394 | 3.325731e-60 | 6.295702e-57 |
| MsG0680035765.01 | MsG0880047696.01 | 0.825775 | 3.900084e-54 | 3.589340e-51 |
| MsG0680035765.01 | MsG0880047703.01 | 0.859702 | 3.445252e-63 | 9.181443e-60 |
| MsG0680035765.01 | MsG0880047763.01 | 0.816216 | 6.199454e-52 | 4.366432e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680035765.01.T01 | MTR_6g088605 | 96.721 | 122 | 4 | 0 | 1 | 122 | 1 | 122 | 5.53e-85 | 246 |
| MsG0680035765.01.T01 | MTR_7g103190 | 90.164 | 122 | 12 | 0 | 1 | 122 | 1 | 122 | 7.77e-80 | 233 |
| MsG0680035765.01.T01 | MTR_5g037160 | 92.308 | 39 | 3 | 0 | 62 | 100 | 409 | 447 | 4.11e-17 | 77.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680035765.01.T01 | AT3G18760 | 62.687 | 134 | 49 | 1 | 1 | 134 | 1 | 133 | 8.23e-56 | 171 |
| MsG0680035765.01.T01 | AT3G18760 | 59.701 | 134 | 48 | 2 | 1 | 134 | 1 | 128 | 9.36e-50 | 156 |
Find 30 sgRNAs with CRISPR-Local
Find 104 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAGCTCTTTGTTGATTTC+GGG | 0.181534 | 6:+111933261 | None:intergenic |
| ATGCAGCTCTTTGTTGATTT+CGG | 0.208605 | 6:+111933260 | None:intergenic |
| GTCACTGAGGTTAAGAGTTT+TGG | 0.239764 | 6:-111935025 | MsG0680035765.01.T01:CDS |
| TCATGCTCACTTGCATCATT+TGG | 0.288871 | 6:+111933292 | None:intergenic |
| CTCTAATTGGTTTAGTTTCA+AGG | 0.335670 | 6:-111935081 | MsG0680035765.01.T01:CDS |
| TTGGTTTAGTTTCAAGGATT+GGG | 0.366475 | 6:-111935075 | MsG0680035765.01.T01:CDS |
| TATGATAACCTTGGCGCAAC+TGG | 0.376873 | 6:-111933066 | MsG0680035765.01.T01:CDS |
| AACATGTGTGTAAAAGAAAT+GGG | 0.380053 | 6:-111935051 | MsG0680035765.01.T01:CDS |
| ATTGGTTTAGTTTCAAGGAT+TGG | 0.385789 | 6:-111935076 | MsG0680035765.01.T01:CDS |
| GCGTGATGGCAGATTCTATC+AGG | 0.387307 | 6:-111934972 | MsG0680035765.01.T01:intron |
| GTAGTTTGTCCTCCTTGTTT+AGG | 0.396913 | 6:+111933235 | None:intergenic |
| GGAACGATGCAGTTGGGTTA+TGG | 0.403450 | 6:-111935004 | MsG0680035765.01.T01:CDS |
| AAACATGTGTGTAAAAGAAA+TGG | 0.446983 | 6:-111935052 | MsG0680035765.01.T01:CDS |
| CAAACTACTGCGTTGGCTAC+TGG | 0.454974 | 6:-111933220 | MsG0680035765.01.T01:CDS |
| AACAAAAGCATGCAATCATA+AGG | 0.460708 | 6:+111935127 | None:intergenic |
| GTATCACTATCCTCGCCATC+AGG | 0.482219 | 6:+111933111 | None:intergenic |
| CTTGAGTTCATGGGAGATGA+AGG | 0.503780 | 6:-111933171 | MsG0680035765.01.T01:CDS |
| AAAATTGGGCTTGAGTTCAT+GGG | 0.544552 | 6:-111933180 | MsG0680035765.01.T01:CDS |
| TCTGAAATAAATAGACCTGA+TGG | 0.565799 | 6:-111933126 | MsG0680035765.01.T01:CDS |
| AGGAGGACAAACTACTGCGT+TGG | 0.582013 | 6:-111933227 | MsG0680035765.01.T01:CDS |
| CAACTTTACCAGTTGCGCCA+AGG | 0.585916 | 6:+111933058 | None:intergenic |
| GATGATGAATATGATAACCT+TGG | 0.610678 | 6:-111933075 | MsG0680035765.01.T01:CDS |
| AATAAATAGACCTGATGGCG+AGG | 0.631134 | 6:-111933121 | MsG0680035765.01.T01:CDS |
| AAGAAATGGGGTTGTCACTG+AGG | 0.631658 | 6:-111935038 | MsG0680035765.01.T01:CDS |
| GGCGAGGATAGTGATACAGA+CGG | 0.636843 | 6:-111933105 | MsG0680035765.01.T01:CDS |
| AAAAGCATGCAATCATAAGG+TGG | 0.660043 | 6:+111935130 | None:intergenic |
| AATGATGCAAGTGAGCATGA+TGG | 0.687340 | 6:-111933289 | MsG0680035765.01.T01:CDS |
| ACATGTGTGTAAAAGAAATG+GGG | 0.688446 | 6:-111935050 | MsG0680035765.01.T01:CDS |
| AGAGCTGCATTACCTAAACA+AGG | 0.691182 | 6:-111933247 | MsG0680035765.01.T01:CDS |
| GCTGCATTACCTAAACAAGG+AGG | 0.778109 | 6:-111933244 | MsG0680035765.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAATAGATTATTTGTATT+TGG | - | Chr6:111933861-111933880 | MsG0680035765.01.T01:intron | 10.0% |
| !! | AATAAATAAATAAATCATGC+AGG | + | Chr6:111933437-111933456 | None:intergenic | 15.0% |
| !! | TATAAAAATAGAATTTGACA+TGG | - | Chr6:111933932-111933951 | MsG0680035765.01.T01:intron | 15.0% |
| !!! | TCTATTTTTTAATGAATGTA+GGG | - | Chr6:111934606-111934625 | MsG0680035765.01.T01:intron | 15.0% |
| !!! | TGTTTTTATAAACTATCTTA+AGG | - | Chr6:111934008-111934027 | MsG0680035765.01.T01:intron | 15.0% |
| !!! | TTCTATTTTTTAATGAATGT+AGG | - | Chr6:111934605-111934624 | MsG0680035765.01.T01:intron | 15.0% |
| !! | ATAGTTTATAAAAACAGTGT+AGG | + | Chr6:111934004-111934023 | None:intergenic | 20.0% |
| !! | CAAACTTTGATAAATTATTG+AGG | - | Chr6:111933333-111933352 | MsG0680035765.01.T01:intron | 20.0% |
| !! | CTATTTAACAATACTGAAAA+TGG | + | Chr6:111934160-111934179 | None:intergenic | 20.0% |
| !! | TAGAGAATTTCAATCAAATA+CGG | + | Chr6:111933635-111933654 | None:intergenic | 20.0% |
| !!! | AGTCTTTTAGATTTATAACA+TGG | + | Chr6:111934100-111934119 | None:intergenic | 20.0% |
| ! | AAACATGTGTGTAAAAGAAA+TGG | - | Chr6:111933140-111933159 | MsG0680035765.01.T01:CDS | 25.0% |
| ! | AAATAGAATTTGACATGGAT+AGG | - | Chr6:111933937-111933956 | MsG0680035765.01.T01:intron | 25.0% |
| ! | AACATGTGTGTAAAAGAAAT+GGG | - | Chr6:111933141-111933160 | MsG0680035765.01.T01:CDS | 25.0% |
| ! | GAATTTGAACAAATTGGTAT+TGG | - | Chr6:111934197-111934216 | MsG0680035765.01.T01:intron | 25.0% |
| ! | GTATTGGAATTTGAACAAAT+TGG | - | Chr6:111934191-111934210 | MsG0680035765.01.T01:intron | 25.0% |
| ! | TAAGGATGAAATCAATTCAT+GGG | - | Chr6:111934026-111934045 | MsG0680035765.01.T01:intron | 25.0% |
| ! | TTAAGGATGAAATCAATTCA+TGG | - | Chr6:111934025-111934044 | MsG0680035765.01.T01:intron | 25.0% |
| ! | TTATTGGATGTTTAAATAGC+AGG | - | Chr6:111933803-111933822 | MsG0680035765.01.T01:intron | 25.0% |
| ! | TTGTACTAAATATCGTATCA+CGG | + | Chr6:111934246-111934265 | None:intergenic | 25.0% |
| ! | TTGTATTTGGATATATGCAT+TGG | - | Chr6:111933874-111933893 | MsG0680035765.01.T01:intron | 25.0% |
| !! | AATTTTGCAAAACATGTATC+CGG | + | Chr6:111933272-111933291 | None:intergenic | 25.0% |
| !! | TGTTTTGCAAAATTGACTAT+TGG | - | Chr6:111933278-111933297 | MsG0680035765.01.T01:CDS | 25.0% |
| !!! | ATAGACAGGGTTTTAAAAAA+TGG | - | Chr6:111933527-111933546 | MsG0680035765.01.T01:intron | 25.0% |
| !!! | CTTTTTAATTAAAGAGAGAC+AGG | - | Chr6:111933391-111933410 | MsG0680035765.01.T01:intron | 25.0% |
| !!! | TGACTTTTAGAACTTTCAAT+AGG | + | Chr6:111934411-111934430 | None:intergenic | 25.0% |
| AAAATGGTAATATCCACATG+GGG | + | Chr6:111934144-111934163 | None:intergenic | 30.0% | |
| AAATAAATCATGCAGGCATT+GGG | + | Chr6:111933430-111933449 | None:intergenic | 30.0% | |
| ACATGTGTGTAAAAGAAATG+GGG | - | Chr6:111933142-111933161 | MsG0680035765.01.T01:CDS | 30.0% | |
| AGTGTTGTAATCATAGATTG+TGG | + | Chr6:111934342-111934361 | None:intergenic | 30.0% | |
| ATACTTGTTTAGGTAGTGTT+TGG | + | Chr6:111934072-111934091 | None:intergenic | 30.0% | |
| ATATAATCTAGGTGATGTGA+TGG | - | Chr6:111933464-111933483 | MsG0680035765.01.T01:intron | 30.0% | |
| CAACAACATAATTGTGATTG+AGG | - | Chr6:111933600-111933619 | MsG0680035765.01.T01:intron | 30.0% | |
| CATGGCATAAATACTTGTTT+AGG | + | Chr6:111934082-111934101 | None:intergenic | 30.0% | |
| CTATATGCATCACACTAATT+TGG | + | Chr6:111933511-111933530 | None:intergenic | 30.0% | |
| GAAAATGGTAATATCCACAT+GGG | + | Chr6:111934145-111934164 | None:intergenic | 30.0% | |
| GATGATGAATATGATAACCT+TGG | - | Chr6:111935117-111935136 | MsG0680035765.01.T01:CDS | 30.0% | |
| GATGTTTAAATAGCAGGTTA+TGG | - | Chr6:111933809-111933828 | MsG0680035765.01.T01:intron | 30.0% | |
| TAAATAAATCATGCAGGCAT+TGG | + | Chr6:111933431-111933450 | None:intergenic | 30.0% | |
| TCATAGATTGTGGAAAATAG+CGG | + | Chr6:111934332-111934351 | None:intergenic | 30.0% | |
| TGAAAATGGTAATATCCACA+TGG | + | Chr6:111934146-111934165 | None:intergenic | 30.0% | |
| TGAAATTCTCTACAACATCA+AGG | - | Chr6:111933643-111933662 | MsG0680035765.01.T01:intron | 30.0% | |
| TTGTTAAATAGCAGCTATAG+TGG | - | Chr6:111934169-111934188 | MsG0680035765.01.T01:intron | 30.0% | |
| TTTAATTAAAGAGAGACAGG+AGG | - | Chr6:111933394-111933413 | MsG0680035765.01.T01:intron | 30.0% | |
| ! | AACAAAAGCATGCAATCATA+AGG | + | Chr6:111933068-111933087 | None:intergenic | 30.0% |
| ! | ATTGGTTTAGTTTCAAGGAT+TGG | - | Chr6:111933116-111933135 | MsG0680035765.01.T01:CDS | 30.0% |
| ! | CTCTAATTGGTTTAGTTTCA+AGG | - | Chr6:111933111-111933130 | MsG0680035765.01.T01:CDS | 30.0% |
| ! | GTGAAAAAAGAAGCTCTAAT+TGG | - | Chr6:111933098-111933117 | MsG0680035765.01.T01:CDS | 30.0% |
| ! | TCTGAAATAAATAGACCTGA+TGG | - | Chr6:111935066-111935085 | MsG0680035765.01.T01:CDS | 30.0% |
| ! | TTGGTTTAGTTTCAAGGATT+GGG | - | Chr6:111933117-111933136 | MsG0680035765.01.T01:CDS | 30.0% |
| !!! | AGAGCTTCTTTTTTCACATT+CGG | + | Chr6:111933095-111933114 | None:intergenic | 30.0% |
| !!! | CTATGCAGAGTTTTAAACAA+CGG | + | Chr6:111933699-111933718 | None:intergenic | 30.0% |
| AAAAATTGGGCTTGAGTTCA+TGG | - | Chr6:111935011-111935030 | MsG0680035765.01.T01:CDS | 35.0% | |
| AAAATTGGGCTTGAGTTCAT+GGG | - | Chr6:111935012-111935031 | MsG0680035765.01.T01:CDS | 35.0% | |
| AATAGCAGCTATAGTGGTAT+TGG | - | Chr6:111934175-111934194 | MsG0680035765.01.T01:intron | 35.0% | |
| AATTGTGATTGAGGTTGCAT+TGG | - | Chr6:111933609-111933628 | MsG0680035765.01.T01:intron | 35.0% | |
| ACATAACACAACTCTTGGTT+TGG | - | Chr6:111933767-111933786 | MsG0680035765.01.T01:intron | 35.0% | |
| CATAACACAACTCTTGGTTT+GGG | - | Chr6:111933768-111933787 | MsG0680035765.01.T01:intron | 35.0% | |
| GTTTCACATAACACAACTCT+TGG | - | Chr6:111933762-111933781 | MsG0680035765.01.T01:intron | 35.0% | |
| TAGTGTGATGCATATAGACA+GGG | - | Chr6:111933514-111933533 | MsG0680035765.01.T01:intron | 35.0% | |
| TTAGTGTGATGCATATAGAC+AGG | - | Chr6:111933513-111933532 | MsG0680035765.01.T01:intron | 35.0% | |
| ! | AAAAGCATGCAATCATAAGG+TGG | + | Chr6:111933065-111933084 | None:intergenic | 35.0% |
| ! | AAACACTTGACTCCTTGTTT+AGG | + | Chr6:111934689-111934708 | None:intergenic | 35.0% |
| ! | ATAACACAACTCTTGGTTTG+GGG | - | Chr6:111933769-111933788 | MsG0680035765.01.T01:intron | 35.0% |
| ! | CGTTGTTTAAAACTCTGCAT+AGG | - | Chr6:111933697-111933716 | MsG0680035765.01.T01:intron | 35.0% |
| ! | CTCACACTCATTATTTTCAC+CGG | - | Chr6:111933250-111933269 | MsG0680035765.01.T01:CDS | 35.0% |
| ! | TGGGGTAGAAGTTGATTTAT+TGG | - | Chr6:111933787-111933806 | MsG0680035765.01.T01:intron | 35.0% |
| ! | TTAGTTTGAGAGTCTGTCTT+TGG | - | Chr6:111934509-111934528 | MsG0680035765.01.T01:intron | 35.0% |
| !! | ATGCAGCTCTTTGTTGATTT+CGG | + | Chr6:111934664-111934683 | None:intergenic | 35.0% |
| AAAAGAGTTGCACGTTCTTC+TGG | - | Chr6:111934539-111934558 | MsG0680035765.01.T01:intron | 40.0% | |
| AAGCAGCGTGACACAAAAAT+TGG | - | Chr6:111934997-111935016 | MsG0680035765.01.T01:CDS | 40.0% | |
| AATGATGCAAGTGAGCATGA+TGG | - | Chr6:111934632-111934651 | MsG0680035765.01.T01:intron | 40.0% | |
| AGAGCTGCATTACCTAAACA+AGG | - | Chr6:111934674-111934693 | MsG0680035765.01.T01:intron | 40.0% | |
| AGCAGCGTGACACAAAAATT+GGG | - | Chr6:111934998-111935017 | MsG0680035765.01.T01:CDS | 40.0% | |
| CATGGATAGGAGACAAAAAG+TGG | - | Chr6:111933950-111933969 | MsG0680035765.01.T01:intron | 40.0% | |
| TCATGCTCACTTGCATCATT+TGG | + | Chr6:111934632-111934651 | None:intergenic | 40.0% | |
| ! | AATAAATAGACCTGATGGCG+AGG | - | Chr6:111935071-111935090 | MsG0680035765.01.T01:CDS | 40.0% |
| ! | GCAACACAATGCTTTTGATG+TGG | - | Chr6:111933571-111933590 | MsG0680035765.01.T01:intron | 40.0% |
| ! | GTAGTTTGTCCTCCTTGTTT+AGG | + | Chr6:111934960-111934979 | None:intergenic | 40.0% |
| ! | GTCACTGAGGTTAAGAGTTT+TGG | - | Chr6:111933167-111933186 | MsG0680035765.01.T01:CDS | 40.0% |
| ! | TATGGTGTGAAAAAGCGTGA+TGG | - | Chr6:111933206-111933225 | MsG0680035765.01.T01:CDS | 40.0% |
| !! | TGCAGCTCTTTGTTGATTTC+GGG | + | Chr6:111934663-111934682 | None:intergenic | 40.0% |
| !!! | AGTTTTGGAACGATGCAGTT+GGG | - | Chr6:111933182-111933201 | MsG0680035765.01.T01:CDS | 40.0% |
| AACGGTCAGTGTATCTGTTG+TGG | + | Chr6:111933681-111933700 | None:intergenic | 45.0% | |
| AAGAAATGGGGTTGTCACTG+AGG | - | Chr6:111933154-111933173 | MsG0680035765.01.T01:CDS | 45.0% | |
| ATGGTTCGATTCTGTAGCAC+AGG | - | Chr6:111933546-111933565 | MsG0680035765.01.T01:intron | 45.0% | |
| CTGCATAGGTAGATGCGAAT+TGG | - | Chr6:111933711-111933730 | MsG0680035765.01.T01:intron | 45.0% | |
| CTTGAGTTCATGGGAGATGA+AGG | - | Chr6:111935021-111935040 | MsG0680035765.01.T01:CDS | 45.0% | |
| GCTGCATTACCTAAACAAGG+AGG | - | Chr6:111934677-111934696 | MsG0680035765.01.T01:intron | 45.0% | |
| TATGATAACCTTGGCGCAAC+TGG | - | Chr6:111935126-111935145 | MsG0680035765.01.T01:CDS | 45.0% | |
| !! | CGTTCTTCTGGAACTTCGAA+TGG | - | Chr6:111934551-111934570 | MsG0680035765.01.T01:intron | 45.0% |
| !!! | GAGTTTTGGAACGATGCAGT+TGG | - | Chr6:111933181-111933200 | MsG0680035765.01.T01:CDS | 45.0% |
| !! | TATTTATTTATATATAATCT+AGG | - | Chr6:111933453-111933472 | MsG0680035765.01.T01:intron | 5.0% |
| AGGAGGACAAACTACTGCGT+TGG | - | Chr6:111934965-111934984 | MsG0680035765.01.T01:intron | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | + | Chr6:111935137-111935156 | None:intergenic | 50.0% | |
| CCTCTTCTAAATGCCCCATG+TGG | - | Chr6:111934128-111934147 | MsG0680035765.01.T01:intron | 50.0% | |
| CGGTGTGTTCAAACTCCACT+AGG | + | Chr6:111934312-111934331 | None:intergenic | 50.0% | |
| GCGTGATGGCAGATTCTATC+AGG | - | Chr6:111933220-111933239 | MsG0680035765.01.T01:CDS | 50.0% | |
| GCTATAGCACTGTTGCCTAG+TGG | - | Chr6:111934294-111934313 | MsG0680035765.01.T01:intron | 50.0% | |
| GGAACGATGCAGTTGGGTTA+TGG | - | Chr6:111933188-111933207 | MsG0680035765.01.T01:CDS | 50.0% | |
| GGCGAGGATAGTGATACAGA+CGG | - | Chr6:111935087-111935106 | MsG0680035765.01.T01:CDS | 50.0% | |
| GTATCACTATCCTCGCCATC+AGG | + | Chr6:111935084-111935103 | None:intergenic | 50.0% | |
| ! | CCACATGGGGCATTTAGAAG+AGG | + | Chr6:111934131-111934150 | None:intergenic | 50.0% |
| !! | CAAACTACTGCGTTGGCTAC+TGG | - | Chr6:111934972-111934991 | MsG0680035765.01.T01:intron | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr6 | gene | 111933047 | 111935167 | 111933047 | ID=MsG0680035765.01;Name=MsG0680035765.01 |
| Chr6 | mRNA | 111933047 | 111935167 | 111933047 | ID=MsG0680035765.01.T01;Parent=MsG0680035765.01;Name=MsG0680035765.01.T01;_AED=0.45;_eAED=0.46;_QI=12|1|0.5|1|1|1|2|0|150 |
| Chr6 | exon | 111933047 | 111933316 | 111933047 | ID=MsG0680035765.01.T01:exon:9417;Parent=MsG0680035765.01.T01 |
| Chr6 | exon | 111934973 | 111935167 | 111934973 | ID=MsG0680035765.01.T01:exon:9416;Parent=MsG0680035765.01.T01 |
| Chr6 | five_prime_UTR | 111935156 | 111935167 | 111935156 | ID=MsG0680035765.01.T01:five_prime_utr;Parent=MsG0680035765.01.T01 |
| Chr6 | CDS | 111934973 | 111935155 | 111934973 | ID=MsG0680035765.01.T01:cds;Parent=MsG0680035765.01.T01 |
| Chr6 | CDS | 111933047 | 111933316 | 111933047 | ID=MsG0680035765.01.T01:cds;Parent=MsG0680035765.01.T01 |
| Gene Sequence |
| Protein sequence |
