AlfalfaGEDB | MsG0480023162.01

M. sativa cultivar ZhongmuNo.1 / MsG0480023162.01

KEGG: -
GO: -
PFAM: PF11886

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480023162.01.T01	XP_003629921.1	91.304	69	6	0	1	69	1266	1334	7.92E-33	130

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480023162.01.T01	O81283	84.375	64	10	0	1	64	1381	1444	8.54E-30	113

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480023162.01.T01	G7L840	91.304	69	6	0	1	69	1266	1334	3.78e-33	130

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047791.01	MsG0480023162.01	0.804487	2.109548e-49	1.089044e-46
MsG0080048065.01	MsG0480023162.01	0.822033	2.940513e-53	2.432839e-50
MsG0080048152.01	MsG0480023162.01	0.800260	1.566711e-48	7.262101e-46
MsG0080048683.01	MsG0480023162.01	0.800261	1.565898e-48	7.258609e-46
MsG0080048761.01	MsG0480023162.01	-0.808149	3.568905e-50	2.025239e-47
MsG0080048826.01	MsG0480023162.01	0.812413	4.293085e-51	2.727945e-48
MsG0080048849.01	MsG0480023162.01	0.870163	1.795132e-66	6.914765e-63
MsG0080048865.01	MsG0480023162.01	0.812121	4.972122e-51	3.134392e-48
MsG0080048878.01	MsG0480023162.01	0.886201	4.201713e-72	2.972641e-68
MsG0080049011.01	MsG0480023162.01	0.812962	3.255443e-51	2.098594e-48
MsG0080049068.01	MsG0480023162.01	0.818392	2.007358e-52	1.500773e-49
MsG0080049069.01	MsG0480023162.01	0.845842	3.154772e-59	5.327098e-56
MsG0080049147.01	MsG0480023162.01	0.817747	2.809037e-52	2.063184e-49
MsG0180000026.01	MsG0480023162.01	0.829613	4.666813e-55	4.800996e-52
MsG0180000113.01	MsG0480023162.01	0.825069	5.729399e-54	5.167987e-51
MsG0180000355.01	MsG0480023162.01	0.883124	5.847839e-71	3.660769e-67
MsG0180000544.01	MsG0480023162.01	-0.803198	3.908364e-49	1.951982e-46
MsG0180001356.01	MsG0480023162.01	0.829073	6.311229e-55	6.390115e-52
MsG0180003189.01	MsG0480023162.01	0.809365	1.961284e-50	1.149339e-47
MsG0180003353.01	MsG0480023162.01	0.855007	8.419138e-62	1.916055e-58
MsG0180003493.01	MsG0480023162.01	0.803162	3.977102e-49	1.984465e-46
MsG0180003697.01	MsG0480023162.01	0.867545	1.264475e-65	4.431788e-62
MsG0180003767.01	MsG0480023162.01	-0.808763	2.639485e-50	1.522022e-47
MsG0180003815.01	MsG0480023162.01	0.808384	3.180306e-50	1.815947e-47
MsG0180003821.01	MsG0480023162.01	0.862379	5.283235e-64	1.544069e-60
MsG0180003885.01	MsG0480023162.01	0.824045	9.981450e-54	8.742542e-51
MsG0180004025.01	MsG0480023162.01	0.827029	1.960713e-54	1.870300e-51
MsG0180004046.01	MsG0480023162.01	0.816214	6.205773e-52	4.370634e-49
MsG0180004448.01	MsG0480023162.01	0.826498	2.625028e-54	2.465902e-51
MsG0180004466.01	MsG0480023162.01	0.804904	1.726634e-49	9.011187e-47
MsG0180004493.01	MsG0480023162.01	0.849953	2.322583e-60	4.477960e-57
MsG0180004605.01	MsG0480023162.01	-0.828712	7.718937e-55	7.733310e-52
MsG0180004750.01	MsG0480023162.01	0.860939	1.455665e-63	4.047878e-60
MsG0180004997.01	MsG0480023162.01	0.811682	6.196408e-51	3.860111e-48
MsG0180005169.01	MsG0480023162.01	0.870037	1.974938e-66	7.572913e-63
MsG0180005334.01	MsG0480023162.01	0.800282	1.550208e-48	7.189947e-46
MsG0180005990.01	MsG0480023162.01	0.817689	2.895484e-52	2.123159e-49
MsG0180006031.01	MsG0480023162.01	0.818777	1.641953e-52	1.240648e-49
MsG0180006096.01	MsG0480023162.01	0.871225	8.037210e-67	3.217153e-63
MsG0180006144.01	MsG0480023162.01	0.821263	4.430240e-53	3.586555e-50
MsG0180006220.01	MsG0480023162.01	0.828853	7.136678e-55	7.178976e-52
MsG0280006306.01	MsG0480023162.01	-0.826391	2.784264e-54	2.607731e-51
MsG0280010564.01	MsG0480023162.01	0.813780	2.152063e-51	1.418454e-48
MsG0280011049.01	MsG0480023162.01	0.808205	3.473197e-50	1.973829e-47
MsG0280011059.01	MsG0480023162.01	-0.817576	3.069407e-52	2.243730e-49
MsG0280011255.01	MsG0480023162.01	0.818221	2.194946e-52	1.633120e-49
MsG0280011304.01	MsG0480023162.01	0.837286	5.684720e-57	7.349495e-54
MsG0280011371.01	MsG0480023162.01	0.801954	7.054575e-49	3.413275e-46
MsG0280011415.01	MsG0480023162.01	0.800255	1.570004e-48	7.276641e-46
MsG0380011581.01	MsG0480023162.01	0.811239	7.734631e-51	4.762621e-48
MsG0380011844.01	MsG0480023162.01	0.839575	1.460266e-57	2.024953e-54
MsG0380012005.01	MsG0480023162.01	0.816592	5.106720e-52	3.633811e-49
MsG0380012012.01	MsG0480023162.01	0.815508	8.916831e-52	6.159830e-49
MsG0380012122.01	MsG0480023162.01	0.842200	2.989151e-58	4.498221e-55
MsG0380012570.01	MsG0480023162.01	0.833256	5.921182e-56	6.781887e-53
MsG0380013467.01	MsG0480023162.01	0.846222	2.487085e-59	4.250530e-56
MsG0380013853.01	MsG0480023162.01	0.803451	3.464116e-49	1.741399e-46
MsG0380014727.01	MsG0480023162.01	0.810621	1.052462e-50	6.375187e-48
MsG0480018584.01	MsG0480023162.01	0.830932	2.222351e-55	2.375854e-52
MsG0480018850.01	MsG0480023162.01	0.858575	7.498582e-63	1.922472e-59
MsG0480018911.01	MsG0480023162.01	0.882662	8.629738e-71	5.300866e-67
MsG0480019007.01	MsG0480023162.01	0.824069	9.853200e-54	8.636442e-51
MsG0480019126.01	MsG0480023162.01	0.802252	6.126658e-49	2.987011e-46
MsG0480019408.01	MsG0480023162.01	0.826701	2.347742e-54	2.218318e-51
MsG0480020024.01	MsG0480023162.01	0.855529	5.933775e-62	1.374081e-58
MsG0480020025.01	MsG0480023162.01	0.845406	4.143317e-59	6.897622e-56
MsG0480020690.01	MsG0480023162.01	0.802200	6.279805e-49	3.057439e-46
MsG0480021037.01	MsG0480023162.01	0.862446	5.039385e-64	1.476381e-60
MsG0480021201.01	MsG0480023162.01	0.828706	7.744458e-55	7.757758e-52
MsG0480021280.01	MsG0480023162.01	0.819030	1.438559e-52	1.094646e-49
MsG0480021768.01	MsG0480023162.01	0.843289	1.535975e-58	2.392053e-55
MsG0480021776.01	MsG0480023162.01	-0.855773	5.038615e-62	1.176329e-58
MsG0480022340.01	MsG0480023162.01	-0.826886	2.120624e-54	2.014494e-51
MsG0480022780.01	MsG0480023162.01	0.815650	8.293144e-52	5.751306e-49
MsG0480023009.01	MsG0480023162.01	0.811560	6.585150e-51	4.089447e-48
MsG0480023073.01	MsG0480023162.01	0.865296	6.547291e-65	2.119194e-61
MsG0480023162.01	MsG0480023261.01	0.822111	2.821216e-53	2.339342e-50
MsG0480023162.01	MsG0480023384.01	0.804663	1.938983e-49	1.005570e-46
MsG0480023162.01	MsG0480023448.01	0.818049	2.400286e-52	1.777485e-49
MsG0480023162.01	MsG0480023652.01	0.895864	6.389235e-76	6.743430e-72
MsG0480023162.01	MsG0480023660.01	0.824650	7.195243e-54	6.413019e-51
MsG0480023162.01	MsG0480023814.01	0.801916	7.183434e-49	3.472323e-46
MsG0480023162.01	MsG0480023867.01	0.834419	3.029787e-56	3.593693e-53
MsG0480023162.01	MsG0480023909.01	0.822254	2.612968e-53	2.175644e-50
MsG0480023162.01	MsG0480024030.01	0.803303	3.718075e-49	1.861869e-46
MsG0480023162.01	MsG0580024161.01	0.806829	6.802407e-50	3.729412e-47
MsG0480023162.01	MsG0580024495.01	0.810557	1.086302e-50	6.568838e-48
MsG0480023162.01	MsG0580024619.01	0.832326	1.007747e-55	1.122498e-52
MsG0480023162.01	MsG0580024725.01	0.814327	1.630342e-51	1.090664e-48
MsG0480023162.01	MsG0580024775.01	0.813724	2.214200e-51	1.457258e-48
MsG0480023162.01	MsG0580025268.01	0.819479	1.136465e-52	8.755863e-50
MsG0480023162.01	MsG0580025369.01	-0.800113	1.678229e-48	7.750000e-46
MsG0480023162.01	MsG0580025627.01	0.820512	6.596786e-53	5.230157e-50
MsG0480023162.01	MsG0580026206.01	0.810867	9.308810e-51	5.676094e-48
MsG0480023162.01	MsG0580026921.01	0.805358	1.387753e-49	7.326911e-47
MsG0480023162.01	MsG0580027103.01	0.847608	1.038151e-59	1.855291e-56
MsG0480023162.01	MsG0580027928.01	-0.808997	2.352563e-50	1.365026e-47
MsG0480023162.01	MsG0580028033.01	0.816317	5.886469e-52	4.157447e-49
MsG0480023162.01	MsG0580028044.01	0.806334	8.651911e-50	4.683560e-47
MsG0480023162.01	MsG0580028551.01	0.818502	1.895307e-52	1.421241e-49
MsG0480023162.01	MsG0580028570.01	0.806914	6.527572e-50	3.586543e-47
MsG0480023162.01	MsG0580028630.01	0.844250	8.494653e-59	1.363242e-55
MsG0480023162.01	MsG0580029039.01	0.804561	2.036768e-49	1.053467e-46
MsG0480023162.01	MsG0580029549.01	0.828080	1.096573e-54	1.078677e-51
MsG0480023162.01	MsG0580029717.01	0.835233	1.891005e-56	2.298417e-53
MsG0480023162.01	MsG0580029734.01	0.812771	3.585543e-51	2.299708e-48
MsG0480023162.01	MsG0580029879.01	0.831183	1.928742e-55	2.077135e-52
MsG0480023162.01	MsG0580029914.01	0.824852	6.447248e-54	5.779644e-51
MsG0480023162.01	MsG0580029924.01	0.819994	8.669981e-53	6.776375e-50
MsG0480023162.01	MsG0580029925.01	0.801154	1.029599e-48	4.882010e-46
MsG0480023162.01	MsG0680030356.01	-0.804759	1.851225e-49	9.624896e-47
MsG0480023162.01	MsG0680030515.01	0.832463	9.321656e-56	1.042653e-52
MsG0480023162.01	MsG0680030555.01	0.836935	6.989627e-57	8.941340e-54
MsG0480023162.01	MsG0680030636.01	0.825093	5.657244e-54	5.106296e-51
MsG0480023162.01	MsG0680031333.01	-0.807407	5.130973e-50	2.855666e-47
MsG0480023162.01	MsG0680031468.01	0.820290	7.417267e-53	5.844774e-50
MsG0480023162.01	MsG0680031939.01	0.859735	3.366695e-63	8.982761e-60
MsG0480023162.01	MsG0680032378.01	0.851230	1.015862e-60	2.042406e-57
MsG0480023162.01	MsG0680032473.01	-0.800276	1.554789e-48	7.209894e-46
MsG0480023162.01	MsG0680032827.01	0.851776	7.117798e-61	1.456282e-57
MsG0480023162.01	MsG0680032830.01	0.810907	9.128539e-51	5.572115e-48
MsG0480023162.01	MsG0680032832.01	0.806326	8.686107e-50	4.701155e-47
MsG0480023162.01	MsG0680033377.01	0.813130	2.991639e-51	1.937200e-48
MsG0480023162.01	MsG0680033459.01	0.808058	3.732428e-50	2.112802e-47
MsG0480023162.01	MsG0680035765.01	0.860077	2.656155e-63	7.171988e-60
MsG0480023162.01	MsG0680035859.01	0.816018	6.865774e-52	4.809519e-49
MsG0480023162.01	MsG0680035877.01	0.846716	1.823871e-59	3.167848e-56
MsG0480023162.01	MsG0780035957.01	0.825556	4.396379e-54	4.020570e-51
MsG0480023162.01	MsG0780035960.01	0.827729	1.332301e-54	1.297100e-51
MsG0480023162.01	MsG0780036071.01	0.802639	5.099013e-49	2.510523e-46
MsG0480023162.01	MsG0780036186.01	0.802029	6.810703e-49	3.301590e-46
MsG0480023162.01	MsG0780036486.01	0.834050	3.749585e-56	4.398158e-53
MsG0480023162.01	MsG0780036659.01	0.853517	2.267864e-61	4.913322e-58
MsG0480023162.01	MsG0780037082.01	0.808495	3.011191e-50	1.724325e-47
MsG0480023162.01	MsG0780037093.01	0.811410	7.099419e-51	4.391467e-48
MsG0480023162.01	MsG0780037157.01	0.806161	9.407333e-50	5.070326e-47
MsG0480023162.01	MsG0780037330.01	0.804821	1.797234e-49	9.359258e-47
MsG0480023162.01	MsG0780037701.01	0.827414	1.585403e-54	1.529596e-51
MsG0480023162.01	MsG0780038056.01	0.820024	8.535573e-53	6.677189e-50
MsG0480023162.01	MsG0780038309.01	-0.828209	1.021146e-54	1.008262e-51
MsG0480023162.01	MsG0780038348.01	0.823796	1.142014e-53	9.934031e-51
MsG0480023162.01	MsG0780038892.01	0.817955	2.521421e-52	1.862395e-49
MsG0480023162.01	MsG0780039429.01	0.818281	2.127512e-52	1.585589e-49
MsG0480023162.01	MsG0780040388.01	0.805736	1.156010e-49	6.163330e-47
MsG0480023162.01	MsG0780040566.01	-0.803454	3.458703e-49	1.738801e-46
MsG0480023162.01	MsG0780040763.01	0.830530	2.788556e-55	2.945727e-52
MsG0480023162.01	MsG0780041091.01	0.809055	2.285611e-50	1.328294e-47
MsG0480023162.01	MsG0780041137.01	0.808070	3.710495e-50	2.101058e-47
MsG0480023162.01	MsG0780041391.01	0.806898	6.575783e-50	3.611582e-47
MsG0480023162.01	MsG0780041435.01	0.810837	9.448334e-51	5.756636e-48
MsG0480023162.01	MsG0780041729.01	-0.833699	4.591003e-56	5.328047e-53
MsG0480023162.01	MsG0780041747.01	0.871563	6.213159e-67	2.517779e-63
MsG0480023162.01	MsG0880042022.01	0.825683	4.101324e-54	3.764547e-51
MsG0480023162.01	MsG0880042134.01	0.831768	1.384518e-55	1.517431e-52
MsG0480023162.01	MsG0880042700.01	0.810076	1.379335e-50	8.236005e-48
MsG0480023162.01	MsG0880042857.01	0.822923	1.827116e-53	1.550524e-50
MsG0480023162.01	MsG0880043024.01	0.817428	3.314337e-52	2.413140e-49
MsG0480023162.01	MsG0880044005.01	0.827163	1.820453e-54	1.743459e-51
MsG0480023162.01	MsG0880044101.01	0.804379	2.222555e-49	1.144229e-46
MsG0480023162.01	MsG0880044142.01	0.833759	4.433373e-56	5.155055e-53
MsG0480023162.01	MsG0880044691.01	0.811273	7.601956e-51	4.685085e-48
MsG0480023162.01	MsG0880045010.01	-0.813555	2.411896e-51	1.580111e-48
MsG0480023162.01	MsG0880045387.01	0.800718	1.263904e-48	5.926818e-46
MsG0480023162.01	MsG0880045605.01	-0.810383	1.184356e-50	7.128497e-48
MsG0480023162.01	MsG0880045684.01	0.811269	7.616320e-51	4.693533e-48
MsG0480023162.01	MsG0880045992.01	0.811917	5.506981e-51	3.452239e-48
MsG0480023162.01	MsG0880046377.01	0.811852	5.689625e-51	3.560615e-48
MsG0480023162.01	MsG0880046382.01	0.828515	8.614921e-55	8.582080e-52
MsG0480023162.01	MsG0880046517.01	0.808234	3.423124e-50	1.946853e-47
MsG0480023162.01	MsG0880046536.01	0.830314	3.148205e-55	3.304895e-52
MsG0480023162.01	MsG0880046930.01	0.826705	2.342658e-54	2.213779e-51
MsG0480023162.01	MsG0880046963.01	-0.831044	2.085945e-55	2.237303e-52
MsG0480023162.01	MsG0880047052.01	0.816585	5.126873e-52	3.647373e-49
MsG0480023162.01	MsG0880047267.01	0.824448	8.025808e-54	7.110510e-51
MsG0480023162.01	MsG0880047422.01	-0.820610	6.262075e-53	4.978198e-50
MsG0480023162.01	MsG0880047696.01	0.853059	3.069178e-61	6.546781e-58
MsG0480023162.01	MsG0880047703.01	0.873616	1.280660e-67	5.592779e-64
MsG0480023162.01	MsG0880047754.01	0.816659	4.934550e-52	3.517824e-49
MsG0480023162.01	MsG0880047763.01	0.849663	2.797950e-60	5.343268e-57
MsG0380015066.01	MsG0480023162.01	-0.819704	1.009860e-52	7.829172e-50
MsG0380015216.01	MsG0480023162.01	0.802753	4.829746e-49	2.385004e-46
MsG0380015435.01	MsG0480023162.01	0.808953	2.404232e-50	1.393343e-47
MsG0380015533.01	MsG0480023162.01	0.837003	6.714145e-57	8.606750e-54
MsG0380015703.01	MsG0480023162.01	0.863545	2.305563e-64	7.015263e-61
MsG0380015784.01	MsG0480023162.01	0.820330	7.261465e-53	5.728211e-50
MsG0380015870.01	MsG0480023162.01	0.804299	2.309188e-49	1.186374e-46
MsG0380016191.01	MsG0480023162.01	-0.841360	4.981945e-58	7.302374e-55
MsG0380016347.01	MsG0480023162.01	-0.850621	1.508044e-60	2.971735e-57
MsG0380016540.01	MsG0480023162.01	0.824372	8.363969e-54	7.394244e-51
MsG0380016559.01	MsG0480023162.01	0.803624	3.189012e-49	1.610252e-46
MsG0380016560.01	MsG0480023162.01	0.818838	1.590330e-52	1.203697e-49
MsG0380016671.01	MsG0480023162.01	0.861312	1.121005e-63	3.158777e-60
MsG0380016740.01	MsG0480023162.01	0.808114	3.631163e-50	2.058573e-47
MsG0380016820.01	MsG0480023162.01	0.869490	2.977701e-66	1.119846e-62
MsG0380017023.01	MsG0480023162.01	0.833277	5.849064e-56	6.703488e-53
MsG0380017085.01	MsG0480023162.01	0.885877	5.564939e-72	3.884865e-68
MsG0380017198.01	MsG0480023162.01	0.838485	2.797181e-57	3.751780e-54
MsG0380017202.01	MsG0480023162.01	0.828374	9.317538e-55	9.244144e-52
MsG0380017293.01	MsG0480023162.01	0.844975	5.417115e-59	8.895506e-56
MsG0380017540.01	MsG0480023162.01	0.805204	1.494049e-49	7.857043e-47
MsG0380017878.01	MsG0480023162.01	-0.830799	2.395500e-55	2.550843e-52
MsG0380017891.01	MsG0480023162.01	-0.808846	2.534427e-50	1.464628e-47
MsG0380017931.01	MsG0480023162.01	0.813619	2.334841e-51	1.532306e-48
MsG0380018022.01	MsG0480023162.01	0.802055	6.726065e-49	3.262822e-46
MsG0380018044.01	MsG0480023162.01	0.821561	3.781570e-53	3.087184e-50
MsG0480018091.01	MsG0480023162.01	-0.820849	5.519011e-53	4.417227e-50
MsG0480018214.01	MsG0480023162.01	0.823464	1.366150e-53	1.177112e-50
MsG0480018402.01	MsG0480023162.01	0.815201	1.043774e-51	7.149238e-49
MsG0280007062.01	MsG0480023162.01	0.841573	4.378268e-58	6.460497e-55
MsG0280007193.01	MsG0480023162.01	-0.867844	1.014124e-65	3.591544e-62
MsG0280007211.01	MsG0480023162.01	-0.817282	3.576229e-52	2.593115e-49
MsG0280007307.01	MsG0480023162.01	0.808703	2.719194e-50	1.565505e-47
MsG0280007575.01	MsG0480023162.01	0.827057	1.929865e-54	1.842450e-51
MsG0280007647.01	MsG0480023162.01	0.822604	2.167424e-53	1.822921e-50
MsG0280007847.01	MsG0480023162.01	0.806185	9.300229e-50	5.015673e-47
MsG0280007903.01	MsG0480023162.01	0.848943	4.439654e-60	8.282449e-57
MsG0280008429.01	MsG0480023162.01	0.817374	3.408620e-52	2.478076e-49
MsG0280008660.01	MsG0480023162.01	-0.822326	2.514616e-53	2.098098e-50
MsG0280008928.01	MsG0480023162.01	0.869181	3.753177e-66	1.395566e-62
MsG0280008929.01	MsG0480023162.01	0.861342	1.097471e-63	3.095608e-60
MsG0280009256.01	MsG0480023162.01	0.854154	1.486609e-61	3.289761e-58
MsG0280009685.01	MsG0480023162.01	0.863378	2.597549e-64	7.858122e-61
MsG0280010082.01	MsG0480023162.01	0.841444	4.735315e-58	6.959855e-55
MsG0280010288.01	MsG0480023162.01	0.862279	5.671049e-64	1.651567e-60
MsG0280010532.01	MsG0480023162.01	-0.805304	1.424057e-49	7.508005e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480023162.01.T01	MTR_8g088370	91.304	69	6	0	1	69	1266	1334	9.59e-37	130
MsG0480023162.01.T01	MTR_2g030160	71.014	69	20	0	1	69	731	799	8.39e-29	107
MsG0480023162.01.T01	MTR_2g030630	45.312	64	33	1	1	64	1221	1282	2.08e-13	63.5

Query id	Subject id	identity %	alignment length	mismatches	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480023162.01.T01	AT4G02510	84.375	64	10	1	64	1381	1444	8.70e-31	113
MsG0480023162.01.T01	AT4G02510	84.375	64	10	1	64	1381	1444	8.70e-31	113
MsG0480023162.01.T01	AT4G02510	84.375	64	10	1	64	1381	1444	8.70e-31	113
MsG0480023162.01.T01	AT4G02510	84.375	64	10	1	64	1381	1444	8.70e-31	113
MsG0480023162.01.T01	AT3G16620	45.161	62	34	3	64	972	1033	3.20e-14	66.2
MsG0480023162.01.T01	AT2G16640	45.161	62	34	3	64	1090	1151	3.82e-14	65.9
MsG0480023162.01.T01	AT2G16640	45.161	62	34	3	64	1090	1151	3.82e-14	65.9
MsG0480023162.01.T01	AT2G16640	45.161	62	34	3	64	1090	1151	3.82e-14	65.9

Find 26 sgRNAs with CRISPR-Local

Find 25 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGAAATCTGTGACTGGAAAT+TGG	0.308064	4:-81623982	None:intergenic
TCTCAAGGTGATTCTGCTTA+TGG	0.363951	4:+81623852	MsG0480023162.01.T01:CDS
GAAGACTGATCCTGCCCAAT+TGG	0.401018	4:-81623912	None:intergenic
GTCTTCATTGAGTTTCTCTC+TGG	0.403945	4:+81623929	MsG0480023162.01.T01:CDS
TTGGTATTAGTGGGGAGCAC+TGG	0.434068	4:+81623819	MsG0480023162.01.T01:CDS
TTCCAGTCACAGATTTCTCT+TGG	0.439411	4:+81623987	MsG0480023162.01.T01:CDS
AGGGAAACGATTGGTATTAG+TGG	0.494090	4:+81623809	None:intergenic
GGGAAACGATTGGTATTAGT+GGG	0.496473	4:+81623810	None:intergenic
TGGTATTAGTGGGGAGCACT+GGG	0.509804	4:+81623820	MsG0480023162.01.T01:CDS
ACTGGGACCGTGCGGTCTCA+AGG	0.510375	4:+81623837	MsG0480023162.01.T01:CDS
TTCTCTCTGGTGCAGTGGAG+AGG	0.514240	4:+81623942	MsG0480023162.01.T01:CDS
CGCCAAGAGAAATCTGTGAC+TGG	0.527890	4:-81623989	None:intergenic
TGAGTTTCTCTCTGGTGCAG+TGG	0.529140	4:+81623937	MsG0480023162.01.T01:CDS
CTCTTGGCGAAGCTATAAGA+TGG	0.536070	4:+81624003	MsG0480023162.01.T01:CDS
CTATAAGATGGCGGTTCGTG+CGG	0.537307	4:+81624015	MsG0480023162.01.T01:CDS
TCTAAGCCTCACTTCAACAT+TGG	0.541559	4:-81623877	None:intergenic
GGATTGAACAACAAGCTTAG+TGG	0.560199	4:+81624036	MsG0480023162.01.T01:CDS
TGGAGAGGTGATTTAGCCGT+GGG	0.589597	4:+81623957	MsG0480023162.01.T01:CDS
GTGGAGAGGTGATTTAGCCG+TGG	0.611173	4:+81623956	MsG0480023162.01.T01:CDS
TGTTGAAGTGAGGCTTAGAG+AGG	0.624868	4:+81623881	MsG0480023162.01.T01:CDS
TGACTGGAAATTGGCTCCCA+CGG	0.635705	4:-81623973	None:intergenic
ATGGAGCCAATGTTGAAGTG+AGG	0.641534	4:+81623871	MsG0480023162.01.T01:CDS
TGGGGAGCACTGGGACCGTG+CGG	0.658055	4:+81623829	MsG0480023162.01.T01:CDS
AGAATCACCTTGAGACCGCA+CGG	0.671150	4:-81623844	None:intergenic
TTGGCGAAGCTATAAGATGG+CGG	0.700030	4:+81624006	MsG0480023162.01.T01:CDS
GGAAACGATTGGTATTAGTG+GGG	0.717259	4:+81623811	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	AGAAATCTGTGACTGGAAAT+TGG	-	Chr4:81623985-81624004	None:intergenic	35.0%
	GTCTTCATTGAGTTTCTCTC+TGG	+	Chr4:81623929-81623948	MsG0480023162.01.T01:CDS	40.0%
	TCTAAGCCTCACTTCAACAT+TGG	-	Chr4:81623880-81623899	None:intergenic	40.0%
	TCTCAAGGTGATTCTGCTTA+TGG	+	Chr4:81623852-81623871	MsG0480023162.01.T01:CDS	40.0%
	TTCCAGTCACAGATTTCTCT+TGG	+	Chr4:81623987-81624006	MsG0480023162.01.T01:CDS	40.0%
!	AGAGAGGCAGATTTTCCAAT+TGG	+	Chr4:81623897-81623916	MsG0480023162.01.T01:CDS	40.0%
!	GAGAGGCAGATTTTCCAATT+GGG	+	Chr4:81623898-81623917	MsG0480023162.01.T01:CDS	40.0%
	ATGGAGCCAATGTTGAAGTG+AGG	+	Chr4:81623871-81623890	MsG0480023162.01.T01:CDS	45.0%
	CTCTTGGCGAAGCTATAAGA+TGG	+	Chr4:81624003-81624022	MsG0480023162.01.T01:CDS	45.0%
	TGTTGAAGTGAGGCTTAGAG+AGG	+	Chr4:81623881-81623900	MsG0480023162.01.T01:CDS	45.0%
	TTGGCGAAGCTATAAGATGG+CGG	+	Chr4:81624006-81624025	MsG0480023162.01.T01:CDS	45.0%
	AGAATCACCTTGAGACCGCA+CGG	-	Chr4:81623847-81623866	None:intergenic	50.0%
	CGCCAAGAGAAATCTGTGAC+TGG	-	Chr4:81623992-81624011	None:intergenic	50.0%
	GAAGACTGATCCTGCCCAAT+TGG	-	Chr4:81623915-81623934	None:intergenic	50.0%
	TGAGTTTCTCTCTGGTGCAG+TGG	+	Chr4:81623937-81623956	MsG0480023162.01.T01:CDS	50.0%
	TGGAGAGGTGATTTAGCCGT+GGG	+	Chr4:81623957-81623976	MsG0480023162.01.T01:CDS	50.0%
!	CTATAAGATGGCGGTTCGTG+CGG	+	Chr4:81624015-81624034	MsG0480023162.01.T01:CDS	50.0%
!	GGCAGATTTTCCAATTGGGC+AGG	+	Chr4:81623902-81623921	MsG0480023162.01.T01:CDS	50.0%
!	TGACTGGAAATTGGCTCCCA+CGG	-	Chr4:81623976-81623995	None:intergenic	50.0%
!	TTGGTATTAGTGGGGAGCAC+TGG	+	Chr4:81623819-81623838	MsG0480023162.01.T01:CDS	50.0%
!!	TGGTATTAGTGGGGAGCACT+GGG	+	Chr4:81623820-81623839	MsG0480023162.01.T01:CDS	50.0%
	GTGGAGAGGTGATTTAGCCG+TGG	+	Chr4:81623956-81623975	MsG0480023162.01.T01:CDS	55.0%
	TTCTCTCTGGTGCAGTGGAG+AGG	+	Chr4:81623942-81623961	MsG0480023162.01.T01:CDS	55.0%
	ACTGGGACCGTGCGGTCTCA+AGG	+	Chr4:81623837-81623856	MsG0480023162.01.T01:CDS	65.0%
!!	TGGGGAGCACTGGGACCGTG+CGG	+	Chr4:81623829-81623848	MsG0480023162.01.T01:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
Chr4	gene	81623819	81624055	81623819	ID=MsG0480023162.01;Name=MsG0480023162.01
Chr4	mRNA	81623819	81624055	81623819	ID=MsG0480023162.01.T01;Parent=MsG0480023162.01;Name=MsG0480023162.01.T01;_AED=0.49;_eAED=0.49;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|78
Chr4	exon	81623819	81624055	81623819	ID=MsG0480023162.01.T01:exon:699;Parent=MsG0480023162.01.T01
Chr4	CDS	81623819	81624055	81623819	ID=MsG0480023162.01.T01:cds;Parent=MsG0480023162.01.T01

Gene Sequence	>MsG0480023162.01.T01 TTGGTATTAGTGGGGAGCACTGGGACCGTGCGGTCTCAAGGTGATTCTGCTTATGGAGCCAATGTTGAAGTGAGGCTTAGAGAGGCAGATTTTCCAATTGGGCAGGATCAGTCTTCATTGAGTTTCTCTCTGGTGCAGTGGAGAGGTGATTTAGCCGTGGGAGCCAATTTCCAGTCACAGATTTCTCTTGGCGAAGCTATAAGATGGCGGTTCGTGCGGATTGAACAACAAGCTTAG
Protein sequence	>MsG0480023162.01.T01 LVLVGSTGTVRSQGDSAYGANVEVRLREADFPIGQDQSSLSFSLVQWRGDLAVGANFQSQISLGEAIRWRFVRIEQQA*