Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000557.01.T01 | RHN76992.1 | 92.802 | 389 | 24 | 3 | 19 | 406 | 175 | 560 | 0 | 650 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000557.01.T01 | Q9CAG5 | 28.296 | 311 | 188 | 6 | 14 | 309 | 422 | 712 | 8.33E-24 | 107 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000557.01.T01 | A0A396JI72 | 92.802 | 389 | 24 | 3 | 19 | 406 | 175 | 560 | 0.0 | 650 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047814.01 | MsG0180000557.01 | 0.807299 | 5.409344e-50 | 3.002113e-47 |
| MsG0080049140.01 | MsG0180000557.01 | 0.800507 | 1.395273e-48 | 6.508002e-46 |
| MsG0180000324.01 | MsG0180000557.01 | 0.816195 | 6.267892e-52 | 4.411975e-49 |
| MsG0180000557.01 | MsG0180001173.01 | 0.802110 | 6.553473e-49 | 3.183434e-46 |
| MsG0180000557.01 | MsG0180003920.01 | 0.810307 | 1.230396e-50 | 7.390699e-48 |
| MsG0180000557.01 | MsG0180004049.01 | 0.815610 | 8.464444e-52 | 5.863929e-49 |
| MsG0180000557.01 | MsG0180004754.01 | 0.863901 | 1.787982e-64 | 5.508761e-61 |
| MsG0180000557.01 | MsG0180005025.01 | 0.815181 | 1.054607e-51 | 7.219389e-49 |
| MsG0180000557.01 | MsG0180005530.01 | 0.834532 | 2.837890e-56 | 3.377536e-53 |
| MsG0180000557.01 | MsG0180006000.01 | 0.814748 | 1.315794e-51 | 8.902638e-49 |
| MsG0180000557.01 | MsG0280007067.01 | 0.814402 | 1.568975e-51 | 1.051786e-48 |
| MsG0180000557.01 | MsG0280007452.01 | 0.808422 | 3.120856e-50 | 1.783744e-47 |
| MsG0180000557.01 | MsG0280008614.01 | 0.823311 | 1.483410e-53 | 1.272631e-50 |
| MsG0180000557.01 | MsG0280008764.01 | 0.803718 | 3.049037e-49 | 1.543256e-46 |
| MsG0180000557.01 | MsG0280008909.01 | 0.818746 | 1.668634e-52 | 1.259698e-49 |
| MsG0180000557.01 | MsG0280009794.01 | 0.853360 | 2.515941e-61 | 5.422029e-58 |
| MsG0180000557.01 | MsG0280010015.01 | 0.815027 | 1.140883e-51 | 7.777983e-49 |
| MsG0180000557.01 | MsG0280010779.01 | 0.824868 | 6.393882e-54 | 5.734375e-51 |
| MsG0180000557.01 | MsG0280010907.01 | 0.841844 | 3.712444e-58 | 5.524496e-55 |
| MsG0180000557.01 | MsG0280010977.01 | 0.828896 | 6.966027e-55 | 7.016377e-52 |
| MsG0180000557.01 | MsG0280011014.01 | 0.810417 | 1.164467e-50 | 7.015193e-48 |
| MsG0180000557.01 | MsG0280011416.01 | 0.805275 | 1.444025e-49 | 7.607472e-47 |
| MsG0180000557.01 | MsG0380015332.01 | 0.805497 | 1.297527e-49 | 6.874822e-47 |
| MsG0180000557.01 | MsG0380015363.01 | 0.810399 | 1.175453e-50 | 7.077745e-48 |
| MsG0180000557.01 | MsG0380015548.01 | 0.814231 | 1.711648e-51 | 1.142066e-48 |
| MsG0180000557.01 | MsG0380015944.01 | 0.851147 | 1.072111e-60 | 2.149633e-57 |
| MsG0180000557.01 | MsG0380016247.01 | 0.844108 | 9.271743e-59 | 1.481555e-55 |
| MsG0180000557.01 | MsG0380016703.01 | 0.826515 | 2.601059e-54 | 2.444575e-51 |
| MsG0180000557.01 | MsG0380016893.01 | 0.830944 | 2.207779e-55 | 2.361000e-52 |
| MsG0180000557.01 | MsG0380016920.01 | 0.813973 | 1.951615e-51 | 1.293072e-48 |
| MsG0180000557.01 | MsG0380016970.01 | 0.810387 | 1.182093e-50 | 7.115549e-48 |
| MsG0180000557.01 | MsG0380016994.01 | 0.823054 | 1.702805e-53 | 1.450465e-50 |
| MsG0180000557.01 | MsG0380017159.01 | 0.857005 | 2.191275e-62 | 5.329455e-59 |
| MsG0180000557.01 | MsG0480019350.01 | 0.819261 | 1.274556e-52 | 9.759779e-50 |
| MsG0180000557.01 | MsG0480019922.01 | 0.837446 | 5.173718e-57 | 6.722391e-54 |
| MsG0180000557.01 | MsG0480020495.01 | 0.804457 | 2.140838e-49 | 1.104335e-46 |
| MsG0180000557.01 | MsG0480020597.01 | 0.820007 | 8.610207e-53 | 6.732126e-50 |
| MsG0180000557.01 | MsG0480020699.01 | 0.823371 | 1.435942e-53 | 1.233933e-50 |
| MsG0180000557.01 | MsG0480020739.01 | 0.814987 | 1.164183e-51 | 7.928191e-49 |
| MsG0180000557.01 | MsG0480020847.01 | 0.827230 | 1.754441e-54 | 1.683513e-51 |
| MsG0180000557.01 | MsG0480020909.01 | 0.820449 | 6.819024e-53 | 5.397303e-50 |
| MsG0180000557.01 | MsG0480022045.01 | 0.801534 | 8.606457e-49 | 4.120116e-46 |
| MsG0180000557.01 | MsG0480022325.01 | 0.823489 | 1.347289e-53 | 1.161773e-50 |
| MsG0180000557.01 | MsG0480022620.01 | 0.823509 | 1.333166e-53 | 1.150221e-50 |
| MsG0180000557.01 | MsG0480023053.01 | 0.801887 | 7.282660e-49 | 3.517858e-46 |
| MsG0180000557.01 | MsG0480023463.01 | 0.827623 | 1.412469e-54 | 1.370772e-51 |
| MsG0180000557.01 | MsG0480023647.01 | 0.804003 | 2.660912e-49 | 1.356758e-46 |
| MsG0180000557.01 | MsG0480023755.01 | 0.803599 | 3.228421e-49 | 1.629139e-46 |
| MsG0180000557.01 | MsG0580024109.01 | 0.829015 | 6.520031e-55 | 6.590093e-52 |
| MsG0180000557.01 | MsG0580024330.01 | 0.815020 | 1.144741e-51 | 7.802822e-49 |
| MsG0180000557.01 | MsG0580024463.01 | 0.801215 | 1.000367e-48 | 4.750577e-46 |
| MsG0180000557.01 | MsG0580024489.01 | 0.839861 | 1.229758e-57 | 1.720499e-54 |
| MsG0180000557.01 | MsG0580026059.01 | 0.831681 | 1.454388e-55 | 1.589758e-52 |
| MsG0180000557.01 | MsG0580026089.01 | 0.808213 | 3.458518e-50 | 1.965920e-47 |
| MsG0180000557.01 | MsG0580026593.01 | 0.840419 | 8.797837e-58 | 1.252455e-54 |
| MsG0180000557.01 | MsG0580027091.01 | 0.817972 | 2.498285e-52 | 1.846146e-49 |
| MsG0180000557.01 | MsG0580027431.01 | 0.807030 | 6.167639e-50 | 3.399074e-47 |
| MsG0180000557.01 | MsG0580028060.01 | 0.851240 | 1.009326e-60 | 2.029973e-57 |
| MsG0180000557.01 | MsG0580028897.01 | 0.816555 | 5.205037e-52 | 3.699991e-49 |
| MsG0180000557.01 | MsG0580029640.01 | 0.810277 | 1.248909e-50 | 7.496118e-48 |
| MsG0180000557.01 | MsG0680030865.01 | 0.849359 | 3.401728e-60 | 6.433096e-57 |
| MsG0180000557.01 | MsG0780036147.01 | 0.804738 | 1.870467e-49 | 9.719888e-47 |
| MsG0180000557.01 | MsG0780036752.01 | 0.851293 | 9.754880e-61 | 1.965273e-57 |
| MsG0180000557.01 | MsG0780036815.01 | 0.822359 | 2.470924e-53 | 2.063659e-50 |
| MsG0180000557.01 | MsG0780038424.01 | 0.800606 | 1.331730e-48 | 6.227437e-46 |
| MsG0180000557.01 | MsG0780038603.01 | 0.820481 | 6.706518e-53 | 5.312627e-50 |
| MsG0180000557.01 | MsG0780039243.01 | 0.821318 | 4.303163e-53 | 3.489138e-50 |
| MsG0180000557.01 | MsG0780039425.01 | 0.829891 | 3.992681e-55 | 4.141171e-52 |
| MsG0180000557.01 | MsG0780039905.01 | 0.810477 | 1.130697e-50 | 6.822683e-48 |
| MsG0180000557.01 | MsG0780040307.01 | 0.809359 | 1.967775e-50 | 1.152958e-47 |
| MsG0180000557.01 | MsG0780040926.01 | 0.809450 | 1.881083e-50 | 1.104764e-47 |
| MsG0180000557.01 | MsG0780041063.01 | 0.810345 | 1.207266e-50 | 7.259155e-48 |
| MsG0180000557.01 | MsG0880042091.01 | 0.820568 | 6.401933e-53 | 5.083645e-50 |
| MsG0180000557.01 | MsG0880042544.01 | 0.840696 | 7.442412e-58 | 1.068643e-54 |
| MsG0180000557.01 | MsG0880042773.01 | 0.860014 | 2.775013e-63 | 7.476323e-60 |
| MsG0180000557.01 | MsG0880042836.01 | 0.800188 | 1.620261e-48 | 7.496584e-46 |
| MsG0180000557.01 | MsG0880043034.01 | 0.805869 | 1.083916e-49 | 5.798570e-47 |
| MsG0180000557.01 | MsG0880043614.01 | 0.811176 | 7.981482e-51 | 4.906461e-48 |
| MsG0180000557.01 | MsG0880044008.01 | 0.806225 | 9.120778e-50 | 4.923984e-47 |
| MsG0180000557.01 | MsG0880044782.01 | 0.822737 | 2.018476e-53 | 1.704008e-50 |
| MsG0180000557.01 | MsG0880045294.01 | 0.827224 | 1.760669e-54 | 1.689158e-51 |
| MsG0180000557.01 | MsG0880045483.01 | 0.815246 | 1.019817e-51 | 6.993735e-49 |
| MsG0180000557.01 | MsG0880046027.01 | 0.800648 | 1.306016e-48 | 6.113700e-46 |
| MsG0180000557.01 | MsG0880047506.01 | 0.826095 | 3.273058e-54 | 3.039625e-51 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000557.01.T01 | MTR_1g014420 | 92.802 | 389 | 24 | 3 | 19 | 406 | 130 | 515 | 0.0 | 649 |
| MsG0180000557.01.T01 | MTR_3g106140 | 69.042 | 407 | 118 | 5 | 2 | 406 | 95 | 495 | 1.68e-174 | 496 |
| MsG0180000557.01.T01 | MTR_2g015870 | 32.995 | 394 | 221 | 12 | 17 | 406 | 86 | 440 | 1.38e-37 | 141 |
| MsG0180000557.01.T01 | MTR_8g080280 | 28.990 | 307 | 198 | 7 | 5 | 303 | 415 | 709 | 4.21e-26 | 111 |
| MsG0180000557.01.T01 | MTR_4g063800 | 32.517 | 286 | 165 | 10 | 33 | 309 | 368 | 634 | 1.03e-23 | 103 |
| MsG0180000557.01.T01 | MTR_5g079550 | 27.056 | 377 | 221 | 12 | 17 | 380 | 20 | 355 | 1.10e-21 | 96.3 |
| MsG0180000557.01.T01 | MTR_1g018180 | 28.523 | 298 | 195 | 9 | 17 | 311 | 61 | 343 | 8.70e-21 | 93.2 |
| MsG0180000557.01.T01 | MTR_3g085610 | 26.518 | 313 | 201 | 7 | 3 | 303 | 412 | 707 | 4.65e-20 | 92.8 |
| MsG0180000557.01.T01 | MTR_7g097020 | 28.671 | 286 | 189 | 7 | 19 | 303 | 484 | 755 | 1.42e-19 | 91.7 |
| MsG0180000557.01.T01 | MTR_4g485520 | 29.044 | 272 | 178 | 6 | 34 | 303 | 389 | 647 | 1.75e-19 | 90.9 |
| MsG0180000557.01.T01 | MTR_4g485520 | 29.779 | 272 | 176 | 7 | 34 | 303 | 221 | 479 | 3.03e-19 | 89.7 |
| MsG0180000557.01.T01 | MTR_1g069845 | 29.861 | 288 | 187 | 8 | 17 | 303 | 323 | 596 | 8.79e-19 | 89.0 |
| MsG0180000557.01.T01 | MTR_1g069845 | 29.861 | 288 | 187 | 8 | 17 | 303 | 440 | 713 | 1.56e-18 | 88.2 |
| MsG0180000557.01.T01 | MTR_1g069845 | 29.861 | 288 | 187 | 8 | 17 | 303 | 444 | 717 | 1.60e-18 | 88.2 |
| MsG0180000557.01.T01 | MTR_7g059405 | 29.779 | 272 | 178 | 5 | 33 | 304 | 376 | 634 | 8.24e-18 | 85.9 |
| MsG0180000557.01.T01 | MTR_3g103050 | 26.974 | 304 | 184 | 9 | 15 | 303 | 49 | 329 | 9.78e-17 | 81.3 |
| MsG0180000557.01.T01 | MTR_3g466220 | 29.066 | 289 | 190 | 7 | 16 | 303 | 531 | 805 | 1.17e-16 | 82.4 |
| MsG0180000557.01.T01 | MTR_3g466220 | 29.066 | 289 | 190 | 7 | 16 | 303 | 552 | 826 | 1.31e-16 | 82.4 |
| MsG0180000557.01.T01 | MTR_5g069340 | 30.657 | 274 | 174 | 5 | 35 | 303 | 51 | 313 | 2.78e-16 | 80.1 |
| MsG0180000557.01.T01 | MTR_7g095010 | 67.273 | 55 | 18 | 0 | 1 | 55 | 4 | 58 | 4.64e-16 | 72.8 |
| MsG0180000557.01.T01 | MTR_3g067685 | 27.413 | 259 | 153 | 8 | 137 | 390 | 154 | 382 | 6.47e-16 | 79.3 |
| MsG0180000557.01.T01 | MTR_7g078330 | 28.777 | 278 | 173 | 8 | 33 | 303 | 382 | 641 | 2.87e-15 | 78.2 |
| MsG0180000557.01.T01 | MTR_1g094215 | 29.329 | 283 | 185 | 6 | 28 | 308 | 172 | 441 | 7.22e-15 | 76.3 |
| MsG0180000557.01.T01 | MTR_1g094215 | 29.329 | 283 | 185 | 6 | 28 | 308 | 355 | 624 | 1.65e-14 | 75.9 |
| MsG0180000557.01.T01 | MTR_5g083030 | 28.972 | 214 | 139 | 5 | 33 | 243 | 420 | 623 | 1.24e-13 | 73.2 |
| MsG0180000557.01.T01 | MTR_2g026130 | 26.190 | 294 | 202 | 7 | 12 | 303 | 169 | 449 | 2.82e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000557.01.T01 | AT4G31890 | 60.337 | 416 | 140 | 7 | 1 | 406 | 118 | 518 | 2.65e-153 | 443 |
| MsG0180000557.01.T01 | AT4G31890 | 60.337 | 416 | 140 | 7 | 1 | 406 | 118 | 518 | 2.65e-153 | 443 |
| MsG0180000557.01.T01 | AT4G31890 | 60.337 | 416 | 140 | 7 | 1 | 406 | 118 | 518 | 2.65e-153 | 443 |
| MsG0180000557.01.T01 | AT2G25130 | 57.635 | 406 | 135 | 10 | 1 | 396 | 89 | 467 | 1.07e-139 | 407 |
| MsG0180000557.01.T01 | AT2G27430 | 30.769 | 390 | 240 | 8 | 17 | 406 | 79 | 438 | 1.42e-35 | 136 |
| MsG0180000557.01.T01 | AT1G67530 | 28.296 | 311 | 188 | 6 | 14 | 309 | 422 | 712 | 8.49e-25 | 107 |
| MsG0180000557.01.T01 | AT1G67530 | 28.296 | 311 | 188 | 6 | 14 | 309 | 422 | 712 | 8.49e-25 | 107 |
| MsG0180000557.01.T01 | AT1G67530 | 28.296 | 311 | 188 | 6 | 14 | 309 | 422 | 712 | 8.49e-25 | 107 |
| MsG0180000557.01.T01 | AT1G24330 | 27.299 | 348 | 214 | 8 | 1 | 326 | 399 | 729 | 6.14e-24 | 104 |
| MsG0180000557.01.T01 | AT1G24330 | 27.299 | 348 | 214 | 8 | 1 | 326 | 399 | 729 | 6.14e-24 | 104 |
| MsG0180000557.01.T01 | AT2G28830 | 33.437 | 323 | 172 | 15 | 4 | 312 | 279 | 572 | 8.68e-24 | 103 |
| MsG0180000557.01.T01 | AT3G46510 | 30.686 | 277 | 167 | 9 | 33 | 302 | 369 | 627 | 2.35e-21 | 96.7 |
| MsG0180000557.01.T01 | AT2G23140 | 29.758 | 289 | 188 | 7 | 16 | 303 | 353 | 627 | 3.40e-19 | 90.1 |
| MsG0180000557.01.T01 | AT2G23140 | 29.758 | 289 | 188 | 7 | 16 | 303 | 353 | 627 | 3.40e-19 | 90.1 |
| MsG0180000557.01.T01 | AT2G23140 | 29.758 | 289 | 188 | 7 | 16 | 303 | 545 | 819 | 6.96e-19 | 89.4 |
| MsG0180000557.01.T01 | AT2G23140 | 29.758 | 289 | 188 | 7 | 16 | 303 | 542 | 816 | 7.01e-19 | 89.4 |
| MsG0180000557.01.T01 | AT2G23140 | 29.758 | 289 | 188 | 7 | 16 | 303 | 542 | 816 | 7.01e-19 | 89.4 |
| MsG0180000557.01.T01 | AT1G71020 | 30.657 | 274 | 175 | 6 | 33 | 303 | 210 | 471 | 1.14e-18 | 88.2 |
| MsG0180000557.01.T01 | AT1G71020 | 30.657 | 274 | 175 | 6 | 33 | 303 | 358 | 619 | 1.19e-18 | 88.6 |
| MsG0180000557.01.T01 | AT1G27910 | 27.844 | 334 | 179 | 9 | 4 | 303 | 398 | 703 | 3.37e-18 | 87.4 |
| MsG0180000557.01.T01 | AT3G54790 | 30.314 | 287 | 184 | 9 | 19 | 303 | 440 | 712 | 9.05e-18 | 85.9 |
| MsG0180000557.01.T01 | AT3G54790 | 30.314 | 287 | 184 | 9 | 19 | 303 | 476 | 748 | 1.19e-17 | 85.5 |
| MsG0180000557.01.T01 | AT3G54790 | 30.314 | 287 | 184 | 9 | 19 | 303 | 476 | 748 | 1.19e-17 | 85.5 |
| MsG0180000557.01.T01 | AT3G01400 | 28.102 | 274 | 182 | 7 | 32 | 303 | 79 | 339 | 3.35e-17 | 82.8 |
| MsG0180000557.01.T01 | AT1G23030 | 29.562 | 274 | 177 | 7 | 33 | 303 | 348 | 608 | 4.23e-17 | 84.0 |
| MsG0180000557.01.T01 | AT3G03440 | 25.691 | 362 | 227 | 9 | 28 | 381 | 76 | 403 | 3.63e-16 | 80.1 |
| MsG0180000557.01.T01 | AT5G67340 | 26.712 | 292 | 200 | 8 | 16 | 306 | 422 | 700 | 1.23e-14 | 76.3 |
| MsG0180000557.01.T01 | AT5G67340 | 26.712 | 292 | 200 | 8 | 16 | 306 | 422 | 700 | 1.23e-14 | 76.3 |
| MsG0180000557.01.T01 | AT3G54850 | 27.305 | 282 | 190 | 6 | 32 | 311 | 361 | 629 | 2.30e-14 | 75.5 |
| MsG0180000557.01.T01 | AT5G58680 | 28.425 | 292 | 189 | 9 | 17 | 303 | 62 | 338 | 3.49e-13 | 70.9 |
| MsG0180000557.01.T01 | AT5G42340 | 29.078 | 282 | 181 | 8 | 32 | 310 | 395 | 660 | 2.66e-12 | 68.9 |
| MsG0180000557.01.T01 | AT4G12710 | 27.599 | 279 | 184 | 6 | 33 | 303 | 62 | 330 | 2.57e-11 | 65.5 |
| MsG0180000557.01.T01 | AT5G62560 | 25.926 | 243 | 159 | 5 | 73 | 303 | 280 | 513 | 4.75e-11 | 65.1 |
Find 87 sgRNAs with CRISPR-Local
Find 105 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATTCGAATAAACCGATAAT+TGG | 0.146060 | 1:-7798236 | MsG0180000557.01.T01:CDS |
| AGCCAATGTTCAGTTTATTT+TGG | 0.151005 | 1:-7798093 | MsG0180000557.01.T01:CDS |
| TAATAAGATTGCATTGTTTC+TGG | 0.166326 | 1:-7797224 | None:intergenic |
| CTTCTTGAGTTGTCGCTTAT+TGG | 0.172434 | 1:-7797801 | MsG0180000557.01.T01:CDS |
| CTGAAGAGTTCTAACTAAAA+AGG | 0.175660 | 1:+7798196 | None:intergenic |
| CCTTTCAATCCTTAGCAATT+TGG | 0.178700 | 1:-7798009 | MsG0180000557.01.T01:CDS |
| GACGATGAAGTTCCGCAAAT+TGG | 0.211163 | 1:+7797666 | None:intergenic |
| CCCGGATGTGTTTCCTATCT+TGG | 0.249308 | 1:-7797949 | MsG0180000557.01.T01:CDS |
| GGGAACTACAACGGAAATTT+AGG | 0.256409 | 1:-7797705 | MsG0180000557.01.T01:CDS |
| GATAAAGGGAAACAGGTTTC+AGG | 0.257229 | 1:-7797726 | MsG0180000557.01.T01:CDS |
| GTAAAATATATTTCTAGTTT+AGG | 0.269652 | 1:-7797255 | MsG0180000557.01.T01:three_prime_UTR |
| AATGCTCGCTAAGGAGAATT+TGG | 0.287918 | 1:-7799017 | MsG0180000557.01.T01:CDS |
| GAGAATAGATAAAGGGAAAC+AGG | 0.320824 | 1:-7797733 | MsG0180000557.01.T01:CDS |
| ATAAAGACTAACATACATTA+TGG | 0.335251 | 1:+7797375 | None:intergenic |
| GAAACGGGCGTCGAGGCTAT+TGG | 0.335825 | 1:-7797763 | MsG0180000557.01.T01:CDS |
| GAAAGTTTGAGAATAGATAA+AGG | 0.351248 | 1:-7797741 | MsG0180000557.01.T01:CDS |
| ACGATGAAGTTCCGCAAATT+GGG | 0.353654 | 1:+7797667 | None:intergenic |
| GCAGCTGAAGACCCAATTAT+CGG | 0.368315 | 1:+7798224 | None:intergenic |
| CTCTACGCATTGCTCAATCT+TGG | 0.375202 | 1:-7798906 | MsG0180000557.01.T01:CDS |
| TCTTGGTCGATGTATTGAAT+TGG | 0.380089 | 1:-7797932 | MsG0180000557.01.T01:CDS |
| GTTATGTCGCATAAATCTTA+TGG | 0.386596 | 1:-7797864 | MsG0180000557.01.T01:CDS |
| AAAATAAACTGAACATTGGC+TGG | 0.400264 | 1:+7798095 | None:intergenic |
| AAAGAAGCCATTGTTAAAGT+TGG | 0.415455 | 1:-7798359 | MsG0180000557.01.T01:CDS |
| TTCAATACATCGACCAAGAT+AGG | 0.418350 | 1:+7797936 | None:intergenic |
| ATCTTCAGATGGTATTGATT+CGG | 0.420177 | 1:-7798306 | MsG0180000557.01.T01:CDS |
| AAAGTTTGAGAATAGATAAA+GGG | 0.425462 | 1:-7797740 | MsG0180000557.01.T01:CDS |
| AGGAGGAGGAAAAGAGTGTT+CGG | 0.438802 | 1:-7797619 | MsG0180000557.01.T01:CDS |
| TACTACTTTGACTCAGAAAC+GGG | 0.441375 | 1:-7797778 | MsG0180000557.01.T01:CDS |
| ATTCGAATAAACCGATAATT+GGG | 0.445804 | 1:-7798235 | MsG0180000557.01.T01:CDS |
| CCAAATTGCTAAGGATTGAA+AGG | 0.463067 | 1:+7798009 | None:intergenic |
| AAGCAGGCCATGATCGAGGC+AGG | 0.466247 | 1:-7797837 | MsG0180000557.01.T01:CDS |
| CCAGATGGAGGAGGAGGAGG+AGG | 0.469128 | 1:-7797633 | MsG0180000557.01.T01:CDS |
| TTCACCTGAATGCCAGGAAA+AGG | 0.471606 | 1:-7797904 | MsG0180000557.01.T01:CDS |
| CACAATCCCTGCCTCGATCA+TGG | 0.473174 | 1:+7797830 | None:intergenic |
| AAACCAGATGGAGGAGGAGG+AGG | 0.478442 | 1:-7797636 | MsG0180000557.01.T01:CDS |
| GTACTACTTTGACTCAGAAA+CGG | 0.478774 | 1:-7797779 | MsG0180000557.01.T01:CDS |
| TTTGCATGAGGAAGATGATT+CGG | 0.481809 | 1:-7799071 | MsG0180000557.01.T01:CDS |
| ACCAAGATAGGAAACACATC+CGG | 0.487266 | 1:+7797948 | None:intergenic |
| ACTGTCTCTGCCCCAATTTG+CGG | 0.487673 | 1:-7797678 | MsG0180000557.01.T01:CDS |
| GAATGATTCACCTGAATGCC+AGG | 0.488606 | 1:-7797910 | MsG0180000557.01.T01:CDS |
| AAGGAGAATTTGGAAGTAAG+AGG | 0.491585 | 1:-7799007 | MsG0180000557.01.T01:CDS |
| ATAAAGGGAAACAGGTTTCA+GGG | 0.497964 | 1:-7797725 | MsG0180000557.01.T01:CDS |
| AGAAGAGGAAGCGAAGAAGA+AGG | 0.499264 | 1:-7799131 | MsG0180000557.01.T01:CDS |
| TTTCGATGTGCAGTGAGTCT+AGG | 0.503361 | 1:-7797412 | MsG0180000557.01.T01:three_prime_UTR |
| GCATTGCTCAATCTTGGAAT+CGG | 0.503671 | 1:-7798900 | MsG0180000557.01.T01:CDS |
| AAAGGCAATAAGTGCTGTCC+CGG | 0.518431 | 1:-7797967 | MsG0180000557.01.T01:CDS |
| GACTATATCTTGAGGCAAGT+TGG | 0.519499 | 1:+7797500 | None:intergenic |
| TACAGAACCAACTTTAACAA+TGG | 0.525029 | 1:+7798352 | None:intergenic |
| AAGCTTATTGAATCTTCAGA+TGG | 0.525195 | 1:-7798317 | MsG0180000557.01.T01:CDS |
| ATCAACTAGAGCAGGTAGAA+AGG | 0.527044 | 1:-7797985 | MsG0180000557.01.T01:CDS |
| GATAAACTCGATTGGCGACA+TGG | 0.527711 | 1:-7798048 | MsG0180000557.01.T01:CDS |
| ACATCGAAAATTCTTCAGAA+TGG | 0.527971 | 1:+7797426 | None:intergenic |
| TTCCAAAATAAACTGAACAT+TGG | 0.543173 | 1:+7798091 | None:intergenic |
| CCAAGATAGGAAACACATCC+GGG | 0.543957 | 1:+7797949 | None:intergenic |
| TAAATCTTATGGTGACAAGC+AGG | 0.546845 | 1:-7797853 | MsG0180000557.01.T01:CDS |
| AATTTGGTATCAACTAGAGC+AGG | 0.548849 | 1:-7797993 | MsG0180000557.01.T01:CDS |
| AGAGGAACACTTTCAATGCT+CGG | 0.553240 | 1:-7798989 | MsG0180000557.01.T01:CDS |
| GAATCGAGCATTGCGACTAA+CGG | 0.558373 | 1:+7798956 | None:intergenic |
| AGTGACTTAAAATGATCTGA+TGG | 0.562549 | 1:+7797477 | None:intergenic |
| CACCGTGAGAATGCTCGCTA+AGG | 0.563128 | 1:-7799026 | MsG0180000557.01.T01:CDS |
| GCAAAACCAGATGGAGGAGG+AGG | 0.565741 | 1:-7797639 | MsG0180000557.01.T01:CDS |
| CTCCTTAGCGAGCATTCTCA+CGG | 0.567241 | 1:+7799024 | None:intergenic |
| TCGTCGTGTGCAAAACCAGA+TGG | 0.569844 | 1:-7797648 | MsG0180000557.01.T01:CDS |
| CATGAGGAAAATTGTGAAGA+GGG | 0.571586 | 1:-7797523 | MsG0180000557.01.T01:CDS |
| GAAACTTAAGAAGCTTGTGA+AGG | 0.574556 | 1:-7799095 | MsG0180000557.01.T01:CDS |
| AAATAAACTGAACATTGGCT+GGG | 0.578121 | 1:+7798096 | None:intergenic |
| CCAATCGAGTTTATCAGAAA+CGG | 0.579904 | 1:+7798056 | None:intergenic |
| TGAGTTTGCAAAACAACATG+AGG | 0.582736 | 1:-7797539 | MsG0180000557.01.T01:CDS |
| TAGTTGATACCAAATTGCTA+AGG | 0.585434 | 1:+7798000 | None:intergenic |
| ATAAACTCGATTGGCGACAT+GGG | 0.594657 | 1:-7798047 | MsG0180000557.01.T01:CDS |
| TCGAGCATTGCGACTAACGG+TGG | 0.599056 | 1:+7798959 | None:intergenic |
| CCGTTTCTGATAAACTCGAT+TGG | 0.600541 | 1:-7798056 | MsG0180000557.01.T01:CDS |
| TTCAGATGGTATTGATTCGG+CGG | 0.602952 | 1:-7798303 | MsG0180000557.01.T01:CDS |
| CGATGAAGTTCCGCAAATTG+GGG | 0.609312 | 1:+7797668 | None:intergenic |
| AGGAAGATGATTCGGTGAAG+CGG | 0.615812 | 1:-7799063 | MsG0180000557.01.T01:CDS |
| ACATGAGGAAAATTGTGAAG+AGG | 0.616000 | 1:-7797524 | MsG0180000557.01.T01:CDS |
| GTGACTTAAAATGATCTGAT+GGG | 0.620285 | 1:+7797478 | None:intergenic |
| GGCGGAGATGGAGACAGAAG+AGG | 0.621626 | 1:-7799146 | None:intergenic |
| TGTGCAAAACCAGATGGAGG+AGG | 0.627739 | 1:-7797642 | MsG0180000557.01.T01:CDS |
| GCTTGTGAAGGATTTGCATG+AGG | 0.641834 | 1:-7799083 | MsG0180000557.01.T01:CDS |
| TGACTCAGAAACGGGCGTCG+AGG | 0.654081 | 1:-7797770 | MsG0180000557.01.T01:CDS |
| AGCAGGCCATGATCGAGGCA+GGG | 0.660279 | 1:-7797836 | MsG0180000557.01.T01:CDS |
| TGACAAGCAGGCCATGATCG+AGG | 0.670822 | 1:-7797841 | MsG0180000557.01.T01:CDS |
| TCTGATGGGACTATATCTTG+AGG | 0.670824 | 1:+7797492 | None:intergenic |
| TCGTGTGCAAAACCAGATGG+AGG | 0.672294 | 1:-7797645 | MsG0180000557.01.T01:CDS |
| CAGGTTTCAGGGAACTACAA+CGG | 0.687032 | 1:-7797714 | MsG0180000557.01.T01:CDS |
| CTTAGCGAGCATTCTCACGG+TGG | 0.717190 | 1:+7799027 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAGTTCATTTTTTTATT+TGG | - | Chr1:7797958-7797977 | MsG0180000557.01.T01:CDS | 10.0% |
| !!! | AAAAGTTCATTTTTTTATTT+GGG | - | Chr1:7797959-7797978 | MsG0180000557.01.T01:CDS | 10.0% |
| !!! | GTAAAATATATTTCTAGTTT+AGG | - | Chr1:7799110-7799129 | MsG0180000557.01.T01:CDS | 15.0% |
| !! | AAAGTTTGAGAATAGATAAA+GGG | - | Chr1:7798625-7798644 | MsG0180000557.01.T01:intron | 20.0% |
| !! | ATAAAGACTAACATACATTA+TGG | + | Chr1:7798993-7799012 | None:intergenic | 20.0% |
| !!! | TTGTTAACTTTCTTTTTTTG+TGG | - | Chr1:7797661-7797680 | MsG0180000557.01.T01:CDS | 20.0% |
| ! | ATATGTATGATTGTGATGTT+AGG | - | Chr1:7797924-7797943 | MsG0180000557.01.T01:CDS | 25.0% |
| ! | ATTCGAATAAACCGATAATT+GGG | - | Chr1:7798130-7798149 | MsG0180000557.01.T01:CDS | 25.0% |
| ! | GAAAGTTTGAGAATAGATAA+AGG | - | Chr1:7798624-7798643 | MsG0180000557.01.T01:intron | 25.0% |
| ! | TTCCAAAATAAACTGAACAT+TGG | + | Chr1:7798277-7798296 | None:intergenic | 25.0% |
| !! | TGAAGAGTTCTAACTAAAAA+GGG | + | Chr1:7798171-7798190 | None:intergenic | 25.0% |
| !!! | AACTTTCTTTTTTTGTGGTT+AGG | - | Chr1:7797666-7797685 | MsG0180000557.01.T01:CDS | 25.0% |
| !!! | CAAGCATGTGATTTTAATTT+TGG | - | Chr1:7797780-7797799 | MsG0180000557.01.T01:CDS | 25.0% |
| !!! | GTTTATTTTGGAAACTGATT+TGG | - | Chr1:7798284-7798303 | MsG0180000557.01.T01:CDS | 25.0% |
| !!! | TTTTTTGTGGTTAGGTAATT+TGG | - | Chr1:7797674-7797693 | MsG0180000557.01.T01:CDS | 25.0% |
| AAAATAAACTGAACATTGGC+TGG | + | Chr1:7798273-7798292 | None:intergenic | 30.0% | |
| AAAGAAGCCATTGTTAAAGT+TGG | - | Chr1:7798006-7798025 | MsG0180000557.01.T01:CDS | 30.0% | |
| AAGCTTATTGAATCTTCAGA+TGG | - | Chr1:7798048-7798067 | MsG0180000557.01.T01:CDS | 30.0% | |
| ACATCGAAAATTCTTCAGAA+TGG | + | Chr1:7798942-7798961 | None:intergenic | 30.0% | |
| AGTGACTTAAAATGATCTGA+TGG | + | Chr1:7798891-7798910 | None:intergenic | 30.0% | |
| GATTCGAATAAACCGATAAT+TGG | - | Chr1:7798129-7798148 | MsG0180000557.01.T01:CDS | 30.0% | |
| GTGACTTAAAATGATCTGAT+GGG | + | Chr1:7798890-7798909 | None:intergenic | 30.0% | |
| GTTATGTCGCATAAATCTTA+TGG | - | Chr1:7798501-7798520 | MsG0180000557.01.T01:intron | 30.0% | |
| TACAGAACCAACTTTAACAA+TGG | + | Chr1:7798016-7798035 | None:intergenic | 30.0% | |
| TACATACAACTGTAAGATCA+CGG | - | Chr1:7797586-7797605 | MsG0180000557.01.T01:CDS | 30.0% | |
| ! | AAATAAACTGAACATTGGCT+GGG | + | Chr1:7798272-7798291 | None:intergenic | 30.0% |
| ! | AGCCAATGTTCAGTTTATTT+TGG | - | Chr1:7798272-7798291 | MsG0180000557.01.T01:CDS | 30.0% |
| ! | CTGAAGAGTTCTAACTAAAA+AGG | + | Chr1:7798172-7798191 | None:intergenic | 30.0% |
| ! | TAGTTGATACCAAATTGCTA+AGG | + | Chr1:7798368-7798387 | None:intergenic | 30.0% |
| ! | TTTTCTTGGATTAAGTGCTT+TGG | - | Chr1:7798107-7798126 | MsG0180000557.01.T01:CDS | 30.0% |
| !! | AAAGGTTTCGTATGTTTTGA+TGG | - | Chr1:7798479-7798498 | MsG0180000557.01.T01:intron | 30.0% |
| !! | ATCTTCAGATGGTATTGATT+CGG | - | Chr1:7798059-7798078 | MsG0180000557.01.T01:CDS | 30.0% |
| !!! | TGTTGTTTTGCAAACTCAAT+TGG | + | Chr1:7798824-7798843 | None:intergenic | 30.0% |
| AAGGAGAATTTGGAAGTAAG+AGG | - | Chr1:7797358-7797377 | MsG0180000557.01.T01:three_prime_UTR | 35.0% | |
| AATTTGGTATCAACTAGAGC+AGG | - | Chr1:7798372-7798391 | MsG0180000557.01.T01:intron | 35.0% | |
| ACATACAACTGTAAGATCAC+GGG | - | Chr1:7797587-7797606 | MsG0180000557.01.T01:CDS | 35.0% | |
| ACATGAGGAAAATTGTGAAG+AGG | - | Chr1:7798841-7798860 | MsG0180000557.01.T01:intron | 35.0% | |
| ATAAAGGGAAACAGGTTTCA+GGG | - | Chr1:7798640-7798659 | MsG0180000557.01.T01:intron | 35.0% | |
| CATGAGGAAAATTGTGAAGA+GGG | - | Chr1:7798842-7798861 | MsG0180000557.01.T01:intron | 35.0% | |
| CCAAATTGCTAAGGATTGAA+AGG | + | Chr1:7798359-7798378 | None:intergenic | 35.0% | |
| CCAATCGAGTTTATCAGAAA+CGG | + | Chr1:7798312-7798331 | None:intergenic | 35.0% | |
| CCTTTCAATCCTTAGCAATT+TGG | - | Chr1:7798356-7798375 | MsG0180000557.01.T01:CDS | 35.0% | |
| GAAACTTAAGAAGCTTGTGA+AGG | - | Chr1:7797270-7797289 | MsG0180000557.01.T01:three_prime_UTR | 35.0% | |
| GAGAATAGATAAAGGGAAAC+AGG | - | Chr1:7798632-7798651 | MsG0180000557.01.T01:intron | 35.0% | |
| GTACTACTTTGACTCAGAAA+CGG | - | Chr1:7798586-7798605 | MsG0180000557.01.T01:intron | 35.0% | |
| TAAATCTTATGGTGACAAGC+AGG | - | Chr1:7798512-7798531 | MsG0180000557.01.T01:intron | 35.0% | |
| TACTACTTTGACTCAGAAAC+GGG | - | Chr1:7798587-7798606 | MsG0180000557.01.T01:intron | 35.0% | |
| TCTTGGTCGATGTATTGAAT+TGG | - | Chr1:7798433-7798452 | MsG0180000557.01.T01:intron | 35.0% | |
| TGAGTTTGCAAAACAACATG+AGG | - | Chr1:7798826-7798845 | MsG0180000557.01.T01:intron | 35.0% | |
| TTCAATACATCGACCAAGAT+AGG | + | Chr1:7798432-7798451 | None:intergenic | 35.0% | |
| TTGTGATGTTAGGAGAATAG+TGG | - | Chr1:7797934-7797953 | MsG0180000557.01.T01:CDS | 35.0% | |
| TTTGCATGAGGAAGATGATT+CGG | - | Chr1:7797294-7797313 | MsG0180000557.01.T01:three_prime_UTR | 35.0% | |
| TTTGTGGTTAGGTAATTTGG+TGG | - | Chr1:7797677-7797696 | MsG0180000557.01.T01:CDS | 35.0% | |
| ! | AAACATACGAAACCTTTTCC+TGG | + | Chr1:7798476-7798495 | None:intergenic | 35.0% |
| AATGCTCGCTAAGGAGAATT+TGG | - | Chr1:7797348-7797367 | MsG0180000557.01.T01:three_prime_UTR | 40.0% | |
| ACCAAGATAGGAAACACATC+CGG | + | Chr1:7798420-7798439 | None:intergenic | 40.0% | |
| ACGATGAAGTTCCGCAAATT+GGG | + | Chr1:7798701-7798720 | None:intergenic | 40.0% | |
| AGAGGAACACTTTCAATGCT+CGG | - | Chr1:7797376-7797395 | MsG0180000557.01.T01:three_prime_UTR | 40.0% | |
| ATAAACTCGATTGGCGACAT+GGG | - | Chr1:7798318-7798337 | MsG0180000557.01.T01:CDS | 40.0% | |
| ATCAACTAGAGCAGGTAGAA+AGG | - | Chr1:7798380-7798399 | MsG0180000557.01.T01:intron | 40.0% | |
| CCGTTTCTGATAAACTCGAT+TGG | - | Chr1:7798309-7798328 | MsG0180000557.01.T01:CDS | 40.0% | |
| GACTATATCTTGAGGCAAGT+TGG | + | Chr1:7798868-7798887 | None:intergenic | 40.0% | |
| GATAAAGGGAAACAGGTTTC+AGG | - | Chr1:7798639-7798658 | MsG0180000557.01.T01:intron | 40.0% | |
| GCATTGCTCAATCTTGGAAT+CGG | - | Chr1:7797465-7797484 | MsG0180000557.01.T01:CDS | 40.0% | |
| GGGAACTACAACGGAAATTT+AGG | - | Chr1:7798660-7798679 | MsG0180000557.01.T01:intron | 40.0% | |
| TCTGATGGGACTATATCTTG+AGG | + | Chr1:7798876-7798895 | None:intergenic | 40.0% | |
| ! | CTTCTTGAGTTGTCGCTTAT+TGG | - | Chr1:7798564-7798583 | MsG0180000557.01.T01:intron | 40.0% |
| ! | GCGATTGTTGCGAATTTTCT+TGG | - | Chr1:7798093-7798112 | MsG0180000557.01.T01:CDS | 40.0% |
| !! | TTCAGATGGTATTGATTCGG+CGG | - | Chr1:7798062-7798081 | MsG0180000557.01.T01:CDS | 40.0% |
| AGAAGAGGAAGCGAAGAAGA+AGG | - | Chr1:7797234-7797253 | MsG0180000557.01.T01:three_prime_UTR | 45.0% | |
| CAGGTTTCAGGGAACTACAA+CGG | - | Chr1:7798651-7798670 | MsG0180000557.01.T01:intron | 45.0% | |
| CCAAGATAGGAAACACATCC+GGG | + | Chr1:7798419-7798438 | None:intergenic | 45.0% | |
| CGATGAAGTTCCGCAAATTG+GGG | + | Chr1:7798700-7798719 | None:intergenic | 45.0% | |
| CTCTACGCATTGCTCAATCT+TGG | - | Chr1:7797459-7797478 | MsG0180000557.01.T01:CDS | 45.0% | |
| GAATGATTCACCTGAATGCC+AGG | - | Chr1:7798455-7798474 | MsG0180000557.01.T01:intron | 45.0% | |
| GACGATGAAGTTCCGCAAAT+TGG | + | Chr1:7798702-7798721 | None:intergenic | 45.0% | |
| GATAAACTCGATTGGCGACA+TGG | - | Chr1:7798317-7798336 | MsG0180000557.01.T01:CDS | 45.0% | |
| GCAGCTGAAGACCCAATTAT+CGG | + | Chr1:7798144-7798163 | None:intergenic | 45.0% | |
| GCTTGTGAAGGATTTGCATG+AGG | - | Chr1:7797282-7797301 | MsG0180000557.01.T01:three_prime_UTR | 45.0% | |
| TTCACCTGAATGCCAGGAAA+AGG | - | Chr1:7798461-7798480 | MsG0180000557.01.T01:intron | 45.0% | |
| TTTCGATGTGCAGTGAGTCT+AGG | - | Chr1:7798953-7798972 | MsG0180000557.01.T01:CDS | 45.0% | |
| ! | AAAGGCAATAAGTGCTGTCC+CGG | - | Chr1:7798398-7798417 | MsG0180000557.01.T01:intron | 45.0% |
| ! | GAAACCTTTTCCTGGCATTC+AGG | + | Chr1:7798468-7798487 | None:intergenic | 45.0% |
| ! | GAATCGAGCATTGCGACTAA+CGG | + | Chr1:7797412-7797431 | None:intergenic | 45.0% |
| !! | AGGAAGATGATTCGGTGAAG+CGG | - | Chr1:7797302-7797321 | MsG0180000557.01.T01:three_prime_UTR | 45.0% |
| !! | AGGAGGAGGAAAAGAGTGTT+CGG | - | Chr1:7798746-7798765 | MsG0180000557.01.T01:intron | 45.0% |
| ACTGTCTCTGCCCCAATTTG+CGG | - | Chr1:7798687-7798706 | MsG0180000557.01.T01:intron | 50.0% | |
| CCCGGATGTGTTTCCTATCT+TGG | - | Chr1:7798416-7798435 | MsG0180000557.01.T01:intron | 50.0% | |
| CTCCTTAGCGAGCATTCTCA+CGG | + | Chr1:7797344-7797363 | None:intergenic | 50.0% | |
| TCGTCGTGTGCAAAACCAGA+TGG | - | Chr1:7798717-7798736 | MsG0180000557.01.T01:intron | 50.0% | |
| TCGTGTGCAAAACCAGATGG+AGG | - | Chr1:7798720-7798739 | MsG0180000557.01.T01:intron | 50.0% | |
| TGTGCAAAACCAGATGGAGG+AGG | - | Chr1:7798723-7798742 | MsG0180000557.01.T01:intron | 50.0% | |
| AAACCAGATGGAGGAGGAGG+AGG | - | Chr1:7798729-7798748 | MsG0180000557.01.T01:intron | 55.0% | |
| CACAATCCCTGCCTCGATCA+TGG | + | Chr1:7798538-7798557 | None:intergenic | 55.0% | |
| CACCGTGAGAATGCTCGCTA+AGG | - | Chr1:7797339-7797358 | MsG0180000557.01.T01:three_prime_UTR | 55.0% | |
| CTTAGCGAGCATTCTCACGG+TGG | + | Chr1:7797341-7797360 | None:intergenic | 55.0% | |
| GCAAAACCAGATGGAGGAGG+AGG | - | Chr1:7798726-7798745 | MsG0180000557.01.T01:intron | 55.0% | |
| TGACAAGCAGGCCATGATCG+AGG | - | Chr1:7798524-7798543 | MsG0180000557.01.T01:intron | 55.0% | |
| ! | TCGAGCATTGCGACTAACGG+TGG | + | Chr1:7797409-7797428 | None:intergenic | 55.0% |
| AAGCAGGCCATGATCGAGGC+AGG | - | Chr1:7798528-7798547 | MsG0180000557.01.T01:intron | 60.0% | |
| AGCAGGCCATGATCGAGGCA+GGG | - | Chr1:7798529-7798548 | MsG0180000557.01.T01:intron | 60.0% | |
| ! | TGACTCAGAAACGGGCGTCG+AGG | - | Chr1:7798595-7798614 | MsG0180000557.01.T01:intron | 60.0% |
| !! | GAAACGGGCGTCGAGGCTAT+TGG | - | Chr1:7798602-7798621 | MsG0180000557.01.T01:intron | 60.0% |
| CCAGATGGAGGAGGAGGAGG+AGG | - | Chr1:7798732-7798751 | MsG0180000557.01.T01:intron | 65.0% | |
| CCTCCTCCTCCTCCTCCATC+TGG | + | Chr1:7798735-7798754 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 7797226 | 7799161 | 7797226 | ID=MsG0180000557.01;Name=MsG0180000557.01 |
| Chr1 | mRNA | 7797226 | 7799161 | 7797226 | ID=MsG0180000557.01.T01;Parent=MsG0180000557.01;Name=MsG0180000557.01.T01;_AED=0.28;_eAED=0.29;_QI=0|0|0.5|1|1|1|2|214|406 |
| Chr1 | exon | 7798887 | 7799161 | 7798887 | ID=MsG0180000557.01.T01:exon:2754;Parent=MsG0180000557.01.T01 |
| Chr1 | exon | 7797226 | 7798385 | 7797226 | ID=MsG0180000557.01.T01:exon:2755;Parent=MsG0180000557.01.T01 |
| Chr1 | CDS | 7798887 | 7799161 | 7798887 | ID=MsG0180000557.01.T01:cds;Parent=MsG0180000557.01.T01 |
| Chr1 | CDS | 7797440 | 7798385 | 7797440 | ID=MsG0180000557.01.T01:cds;Parent=MsG0180000557.01.T01 |
| Chr1 | three_prime_UTR | 7797226 | 7797439 | 7797226 | ID=MsG0180000557.01.T01:three_prime_utr;Parent=MsG0180000557.01.T01 |
| Gene Sequence |
| Protein sequence |
