Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036297.01.T01 | XP_003621257.1 | 99.174 | 242 | 2 | 0 | 1 | 242 | 1 | 242 | 1.14E-175 | 492 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036297.01.T01 | Q38864 | 83.945 | 218 | 34 | 1 | 26 | 242 | 38 | 255 | 9.48E-136 | 385 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036297.01.T01 | G7L212 | 99.174 | 242 | 2 | 0 | 1 | 242 | 1 | 242 | 5.43e-176 | 492 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048856.01 | MsG0780036297.01 | 0.814583 | 1.430822e-51 | 9.638522e-49 |
| MsG0180000295.01 | MsG0780036297.01 | 0.800028 | 1.746050e-48 | 8.045908e-46 |
| MsG0180000836.01 | MsG0780036297.01 | 0.829934 | 3.897988e-55 | 4.047686e-52 |
| MsG0180001892.01 | MsG0780036297.01 | 0.818538 | 1.860903e-52 | 1.396817e-49 |
| MsG0180003455.01 | MsG0780036297.01 | 0.816128 | 6.485620e-52 | 4.556845e-49 |
| MsG0180003943.01 | MsG0780036297.01 | 0.805057 | 1.603860e-49 | 8.402800e-47 |
| MsG0180004099.01 | MsG0780036297.01 | 0.805399 | 1.359992e-49 | 7.187924e-47 |
| MsG0180004707.01 | MsG0780036297.01 | 0.828399 | 9.185115e-55 | 9.119807e-52 |
| MsG0180004754.01 | MsG0780036297.01 | 0.815735 | 7.939659e-52 | 5.519051e-49 |
| MsG0180004769.01 | MsG0780036297.01 | 0.828787 | 7.404865e-55 | 7.434836e-52 |
| MsG0180004975.01 | MsG0780036297.01 | 0.813016 | 3.168573e-51 | 2.045605e-48 |
| MsG0180005153.01 | MsG0780036297.01 | 0.808577 | 2.892390e-50 | 1.659796e-47 |
| MsG0180005530.01 | MsG0780036297.01 | 0.805839 | 1.099458e-49 | 5.877182e-47 |
| MsG0180005746.01 | MsG0780036297.01 | 0.810401 | 1.173843e-50 | 7.068576e-48 |
| MsG0180005921.01 | MsG0780036297.01 | 0.808399 | 3.157263e-50 | 1.803449e-47 |
| MsG0180005962.01 | MsG0780036297.01 | -0.800204 | 1.608641e-48 | 7.445655e-46 |
| MsG0280010778.01 | MsG0780036297.01 | 0.824677 | 7.089491e-54 | 6.323863e-51 |
| MsG0280010977.01 | MsG0780036297.01 | 0.801754 | 7.756221e-49 | 3.733658e-46 |
| MsG0280011014.01 | MsG0780036297.01 | 0.817542 | 3.123631e-52 | 2.281335e-49 |
| MsG0280011258.01 | MsG0780036297.01 | 0.805052 | 1.607627e-49 | 8.421433e-47 |
| MsG0380013475.01 | MsG0780036297.01 | 0.816786 | 4.620557e-52 | 3.305439e-49 |
| MsG0680031431.01 | MsG0780036297.01 | 0.813995 | 1.929622e-51 | 1.279270e-48 |
| MsG0680031762.01 | MsG0780036297.01 | 0.813841 | 2.086640e-51 | 1.377628e-48 |
| MsG0680034853.01 | MsG0780036297.01 | 0.808135 | 3.594138e-50 | 2.038737e-47 |
| MsG0680035498.01 | MsG0780036297.01 | 0.808521 | 2.973990e-50 | 1.704147e-47 |
| MsG0480019710.01 | MsG0780036297.01 | 0.835640 | 1.492091e-56 | 1.835555e-53 |
| MsG0480019922.01 | MsG0780036297.01 | 0.819084 | 1.398354e-52 | 1.065540e-49 |
| MsG0480020739.01 | MsG0780036297.01 | 0.814575 | 1.436882e-51 | 9.677201e-49 |
| MsG0480022045.01 | MsG0780036297.01 | 0.831298 | 1.807469e-55 | 1.953171e-52 |
| MsG0480023130.01 | MsG0780036297.01 | 0.801224 | 9.961244e-49 | 4.731478e-46 |
| MsG0480023463.01 | MsG0780036297.01 | 0.820413 | 6.951038e-53 | 5.496450e-50 |
| MsG0480023620.01 | MsG0780036297.01 | 0.812031 | 5.201329e-51 | 3.270673e-48 |
| MsG0580024462.01 | MsG0780036297.01 | 0.802190 | 6.310127e-49 | 3.071449e-46 |
| MsG0380014948.01 | MsG0780036297.01 | 0.800848 | 1.188588e-48 | 5.592418e-46 |
| MsG0380015332.01 | MsG0780036297.01 | 0.829162 | 6.005403e-55 | 6.097056e-52 |
| MsG0380015463.01 | MsG0780036297.01 | 0.804779 | 1.833400e-49 | 9.537097e-47 |
| MsG0380015786.01 | MsG0780036297.01 | 0.811464 | 6.909308e-51 | 4.279910e-48 |
| MsG0380015944.01 | MsG0780036297.01 | 0.855925 | 4.548006e-62 | 1.067189e-58 |
| MsG0380016247.01 | MsG0780036297.01 | 0.825836 | 3.772132e-54 | 3.477524e-51 |
| MsG0380016893.01 | MsG0780036297.01 | 0.835745 | 1.402863e-56 | 1.731393e-53 |
| MsG0380016994.01 | MsG0780036297.01 | 0.829355 | 5.393083e-55 | 5.506915e-52 |
| MsG0380017159.01 | MsG0780036297.01 | 0.800016 | 1.756371e-48 | 8.090798e-46 |
| MsG0480018278.01 | MsG0780036297.01 | 0.804556 | 2.041411e-49 | 1.055738e-46 |
| MsG0480018313.01 | MsG0780036297.01 | 0.832999 | 6.861648e-56 | 7.799364e-53 |
| MsG0680030447.01 | MsG0780036297.01 | 0.812113 | 4.992882e-51 | 3.146706e-48 |
| MsG0280007506.01 | MsG0780036297.01 | 0.804456 | 2.141901e-49 | 1.104862e-46 |
| MsG0280008391.01 | MsG0780036297.01 | 0.801187 | 1.013341e-48 | 4.808923e-46 |
| MsG0280008614.01 | MsG0780036297.01 | 0.819535 | 1.103754e-52 | 8.517021e-50 |
| MsG0280009417.01 | MsG0780036297.01 | 0.810503 | 1.115791e-50 | 6.737449e-48 |
| MsG0280009794.01 | MsG0780036297.01 | 0.826258 | 2.994302e-54 | 2.793772e-51 |
| MsG0280010489.01 | MsG0780036297.01 | 0.808325 | 3.274599e-50 | 1.866866e-47 |
| MsG0780036297.01 | MsG0780036752.01 | 0.834737 | 2.520515e-56 | 3.017640e-53 |
| MsG0780036297.01 | MsG0780036757.01 | 0.805392 | 1.364875e-49 | 7.212255e-47 |
| MsG0780036297.01 | MsG0780039443.01 | 0.813180 | 2.917032e-51 | 1.891465e-48 |
| MsG0780036297.01 | MsG0780039905.01 | 0.804607 | 1.992180e-49 | 1.031635e-46 |
| MsG0780036297.01 | MsG0780041699.01 | 0.806269 | 8.927616e-50 | 4.825101e-47 |
| MsG0780036297.01 | MsG0880042544.01 | 0.809838 | 1.552127e-50 | 9.210445e-48 |
| MsG0780036297.01 | MsG0880042745.01 | 0.812627 | 3.855128e-51 | 2.463364e-48 |
| MsG0780036297.01 | MsG0880042760.01 | 0.808575 | 2.895204e-50 | 1.661323e-47 |
| MsG0780036297.01 | MsG0880043034.01 | 0.819720 | 1.001229e-52 | 7.765876e-50 |
| MsG0780036297.01 | MsG0880043480.01 | 0.819482 | 1.135162e-52 | 8.746382e-50 |
| MsG0780036297.01 | MsG0880044067.01 | 0.831750 | 1.398418e-55 | 1.531825e-52 |
| MsG0780036297.01 | MsG0880044565.01 | 0.801741 | 7.802523e-49 | 3.754713e-46 |
| MsG0780036297.01 | MsG0880044782.01 | 0.811358 | 7.287595e-51 | 4.501256e-48 |
| MsG0780036297.01 | MsG0880045294.01 | 0.840194 | 1.006982e-57 | 1.423637e-54 |
| MsG0780036297.01 | MsG0880045483.01 | 0.807168 | 5.765582e-50 | 3.188868e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036297.01.T01 | MTR_7g011060 | 99.174 | 242 | 2 | 0 | 1 | 242 | 1 | 242 | 1.38e-179 | 492 |
| MsG0780036297.01.T01 | MTR_6g012520 | 86.066 | 244 | 32 | 1 | 1 | 242 | 1 | 244 | 6.64e-143 | 400 |
| MsG0780036297.01.T01 | MTR_5g041700 | 75.502 | 249 | 50 | 3 | 1 | 240 | 1 | 247 | 1.67e-135 | 381 |
| MsG0780036297.01.T01 | MTR_3g435430 | 78.475 | 223 | 40 | 1 | 26 | 240 | 25 | 247 | 2.35e-131 | 370 |
| MsG0780036297.01.T01 | MTR_4g081950 | 73.896 | 249 | 54 | 3 | 1 | 240 | 37 | 283 | 4.47e-131 | 371 |
| MsG0780036297.01.T01 | MTR_3g094060 | 77.130 | 223 | 43 | 1 | 26 | 240 | 31 | 253 | 9.04e-129 | 364 |
| MsG0780036297.01.T01 | MTR_3g094040 | 69.960 | 253 | 63 | 3 | 1 | 240 | 1 | 253 | 8.54e-128 | 362 |
| MsG0780036297.01.T01 | MTR_3g466790 | 70.204 | 245 | 65 | 1 | 4 | 240 | 10 | 254 | 1.49e-125 | 356 |
| MsG0780036297.01.T01 | MTR_3g466760 | 69.796 | 245 | 66 | 1 | 4 | 240 | 16 | 260 | 2.66e-125 | 356 |
| MsG0780036297.01.T01 | MTR_5g075320 | 66.397 | 247 | 75 | 1 | 2 | 240 | 5 | 251 | 9.59e-124 | 352 |
| MsG0780036297.01.T01 | MTR_5g079950 | 66.000 | 250 | 73 | 3 | 1 | 240 | 10 | 257 | 4.84e-118 | 337 |
| MsG0780036297.01.T01 | MTR_7g061720 | 65.726 | 248 | 74 | 3 | 4 | 240 | 9 | 256 | 1.02e-115 | 332 |
| MsG0780036297.01.T01 | MTR_2g097030 | 63.563 | 247 | 80 | 2 | 4 | 240 | 12 | 258 | 2.24e-112 | 323 |
| MsG0780036297.01.T01 | MTR_4g063975 | 63.265 | 245 | 80 | 2 | 6 | 240 | 12 | 256 | 5.25e-108 | 312 |
| MsG0780036297.01.T01 | MTR_1g085460 | 63.636 | 231 | 72 | 4 | 20 | 238 | 24 | 254 | 3.57e-104 | 302 |
| MsG0780036297.01.T01 | MTR_7g111010 | 60.163 | 246 | 86 | 4 | 2 | 235 | 3 | 248 | 3.51e-102 | 297 |
| MsG0780036297.01.T01 | MTR_1g026020 | 62.054 | 224 | 74 | 3 | 26 | 238 | 29 | 252 | 4.12e-101 | 294 |
| MsG0780036297.01.T01 | MTR_7g110990 | 64.732 | 224 | 67 | 4 | 24 | 235 | 10 | 233 | 2.60e-100 | 292 |
| MsG0780036297.01.T01 | MTR_7g013120 | 54.251 | 247 | 103 | 4 | 2 | 239 | 6 | 251 | 1.75e-91 | 270 |
| MsG0780036297.01.T01 | MTR_4g124340 | 56.444 | 225 | 85 | 4 | 25 | 238 | 60 | 282 | 2.38e-91 | 271 |
| MsG0780036297.01.T01 | MTR_7g013150 | 52.653 | 245 | 108 | 2 | 2 | 238 | 6 | 250 | 7.07e-91 | 268 |
| MsG0780036297.01.T01 | MTR_8g058990 | 58.296 | 223 | 85 | 2 | 23 | 237 | 27 | 249 | 1.73e-90 | 267 |
| MsG0780036297.01.T01 | MTR_8g464350 | 55.372 | 242 | 96 | 3 | 6 | 235 | 7 | 248 | 1.12e-89 | 265 |
| MsG0780036297.01.T01 | MTR_7g013140 | 53.878 | 245 | 100 | 3 | 1 | 237 | 8 | 247 | 3.02e-89 | 264 |
| MsG0780036297.01.T01 | MTR_5g076950 | 53.304 | 227 | 97 | 2 | 25 | 242 | 40 | 266 | 3.72e-86 | 257 |
| MsG0780036297.01.T01 | MTR_0040s0140 | 48.571 | 245 | 114 | 3 | 6 | 240 | 14 | 256 | 1.99e-81 | 244 |
| MsG0780036297.01.T01 | MTR_4g102450 | 51.230 | 244 | 107 | 4 | 4 | 236 | 14 | 256 | 6.52e-81 | 243 |
| MsG0780036297.01.T01 | MTR_5g011210 | 52.444 | 225 | 97 | 3 | 24 | 238 | 35 | 259 | 1.94e-80 | 242 |
| MsG0780036297.01.T01 | MTR_2g090255 | 46.154 | 247 | 118 | 3 | 4 | 240 | 11 | 252 | 3.12e-77 | 234 |
| MsG0780036297.01.T01 | MTR_3g064510 | 47.458 | 236 | 107 | 5 | 23 | 241 | 50 | 285 | 1.72e-73 | 225 |
| MsG0780036297.01.T01 | MTR_6g012500 | 79.508 | 122 | 19 | 1 | 127 | 242 | 161 | 282 | 6.62e-64 | 201 |
| MsG0780036297.01.T01 | MTR_0008s0120 | 41.772 | 237 | 90 | 1 | 1 | 237 | 7 | 195 | 5.99e-58 | 182 |
| MsG0780036297.01.T01 | MTR_2g090270 | 34.667 | 225 | 131 | 8 | 26 | 238 | 35 | 255 | 7.82e-30 | 112 |
| MsG0780036297.01.T01 | MTR_2g090265 | 33.725 | 255 | 145 | 11 | 1 | 238 | 6 | 253 | 2.16e-28 | 108 |
| MsG0780036297.01.T01 | MTR_0122s0020 | 33.200 | 250 | 148 | 10 | 4 | 238 | 16 | 261 | 9.59e-28 | 107 |
| MsG0780036297.01.T01 | MTR_0118s0070 | 32.579 | 221 | 129 | 10 | 31 | 235 | 53 | 269 | 2.85e-25 | 100 |
| MsG0780036297.01.T01 | MTR_4g028640 | 31.535 | 241 | 138 | 10 | 11 | 235 | 29 | 258 | 5.08e-25 | 100 |
| MsG0780036297.01.T01 | MTR_0809s0010 | 32.456 | 228 | 128 | 11 | 25 | 235 | 46 | 264 | 1.83e-24 | 98.6 |
| MsG0780036297.01.T01 | MTR_0122s0020 | 35.233 | 193 | 107 | 9 | 4 | 182 | 16 | 204 | 1.92e-20 | 86.3 |
| MsG0780036297.01.T01 | MTR_4g098930 | 29.644 | 253 | 151 | 12 | 1 | 235 | 3 | 246 | 2.31e-19 | 84.3 |
| MsG0780036297.01.T01 | MTR_5g013440 | 29.130 | 230 | 149 | 10 | 23 | 241 | 26 | 252 | 2.12e-18 | 82.0 |
| MsG0780036297.01.T01 | MTR_4g099370 | 30.357 | 224 | 141 | 10 | 23 | 235 | 25 | 244 | 4.81e-18 | 80.9 |
| MsG0780036297.01.T01 | MTR_1g085365 | 57.143 | 56 | 24 | 0 | 185 | 240 | 4 | 59 | 2.78e-16 | 71.2 |
| MsG0780036297.01.T01 | MTR_4g075790 | 27.854 | 219 | 125 | 9 | 37 | 235 | 32 | 237 | 2.90e-13 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036297.01.T01 | AT3G29030 | 83.945 | 218 | 34 | 1 | 26 | 242 | 38 | 255 | 9.67e-137 | 385 |
| MsG0780036297.01.T01 | AT1G69530 | 76.400 | 250 | 48 | 3 | 1 | 240 | 1 | 249 | 1.42e-136 | 384 |
| MsG0780036297.01.T01 | AT1G69530 | 76.400 | 250 | 48 | 3 | 1 | 240 | 1 | 249 | 1.42e-136 | 384 |
| MsG0780036297.01.T01 | AT2G03090 | 77.108 | 249 | 46 | 3 | 1 | 240 | 6 | 252 | 4.98e-136 | 383 |
| MsG0780036297.01.T01 | AT1G69530 | 76.829 | 246 | 46 | 3 | 1 | 236 | 1 | 245 | 3.00e-135 | 382 |
| MsG0780036297.01.T01 | AT1G26770 | 76.400 | 250 | 47 | 3 | 1 | 240 | 1 | 248 | 2.90e-133 | 375 |
| MsG0780036297.01.T01 | AT1G26770 | 76.400 | 250 | 47 | 3 | 1 | 240 | 11 | 258 | 4.03e-133 | 375 |
| MsG0780036297.01.T01 | AT5G56320 | 69.355 | 248 | 63 | 2 | 1 | 240 | 9 | 251 | 1.49e-127 | 361 |
| MsG0780036297.01.T01 | AT5G56320 | 69.355 | 248 | 63 | 2 | 1 | 240 | 9 | 251 | 1.49e-127 | 361 |
| MsG0780036297.01.T01 | AT5G56320 | 69.919 | 246 | 64 | 2 | 3 | 240 | 8 | 251 | 7.15e-127 | 362 |
| MsG0780036297.01.T01 | AT2G40610 | 67.742 | 248 | 67 | 3 | 2 | 240 | 10 | 253 | 3.14e-122 | 348 |
| MsG0780036297.01.T01 | AT2G39700 | 65.613 | 253 | 69 | 4 | 4 | 240 | 5 | 255 | 7.52e-119 | 339 |
| MsG0780036297.01.T01 | AT5G02260 | 64.143 | 251 | 79 | 3 | 1 | 240 | 6 | 256 | 3.61e-118 | 338 |
| MsG0780036297.01.T01 | AT3G55500 | 62.800 | 250 | 83 | 2 | 1 | 240 | 9 | 258 | 9.65e-117 | 334 |
| MsG0780036297.01.T01 | AT5G05290 | 64.257 | 249 | 75 | 3 | 1 | 240 | 12 | 255 | 1.01e-115 | 332 |
| MsG0780036297.01.T01 | AT2G37640 | 65.462 | 249 | 74 | 3 | 4 | 240 | 12 | 260 | 1.38e-115 | 331 |
| MsG0780036297.01.T01 | AT1G69530 | 71.739 | 230 | 52 | 4 | 1 | 220 | 1 | 227 | 5.33e-115 | 329 |
| MsG0780036297.01.T01 | AT1G69530 | 67.600 | 250 | 40 | 4 | 1 | 240 | 1 | 219 | 8.14e-115 | 328 |
| MsG0780036297.01.T01 | AT2G28950 | 63.137 | 255 | 79 | 3 | 1 | 240 | 1 | 255 | 1.01e-111 | 321 |
| MsG0780036297.01.T01 | AT2G37640 | 68.269 | 208 | 56 | 2 | 43 | 240 | 28 | 235 | 1.14e-102 | 298 |
| MsG0780036297.01.T01 | AT4G01630 | 59.109 | 247 | 88 | 5 | 2 | 235 | 3 | 249 | 7.92e-102 | 296 |
| MsG0780036297.01.T01 | AT1G20190 | 62.273 | 220 | 72 | 3 | 28 | 236 | 28 | 247 | 8.38e-98 | 286 |
| MsG0780036297.01.T01 | AT5G39280 | 55.263 | 228 | 96 | 1 | 17 | 238 | 45 | 272 | 4.36e-92 | 272 |
| MsG0780036297.01.T01 | AT5G39300 | 55.357 | 224 | 94 | 1 | 21 | 238 | 50 | 273 | 8.11e-91 | 269 |
| MsG0780036297.01.T01 | AT5G39270 | 54.955 | 222 | 94 | 1 | 23 | 238 | 55 | 276 | 5.24e-89 | 265 |
| MsG0780036297.01.T01 | AT5G39290 | 54.091 | 220 | 95 | 1 | 25 | 238 | 57 | 276 | 9.96e-88 | 261 |
| MsG0780036297.01.T01 | AT5G39310 | 53.304 | 227 | 99 | 2 | 19 | 238 | 83 | 309 | 2.25e-83 | 251 |
| MsG0780036297.01.T01 | AT1G12560 | 51.639 | 244 | 107 | 3 | 1 | 235 | 14 | 255 | 1.32e-82 | 248 |
| MsG0780036297.01.T01 | AT1G62980 | 54.464 | 224 | 90 | 4 | 26 | 238 | 31 | 253 | 3.60e-81 | 244 |
| MsG0780036297.01.T01 | AT3G15370 | 50.820 | 244 | 110 | 6 | 7 | 240 | 8 | 251 | 1.42e-79 | 239 |
| MsG0780036297.01.T01 | AT3G03220 | 50.000 | 226 | 104 | 2 | 25 | 241 | 39 | 264 | 8.79e-79 | 238 |
| MsG0780036297.01.T01 | AT5G39260 | 53.636 | 220 | 100 | 2 | 21 | 238 | 40 | 259 | 2.92e-78 | 237 |
| MsG0780036297.01.T01 | AT1G20190 | 57.754 | 187 | 68 | 3 | 61 | 236 | 2 | 188 | 6.35e-76 | 228 |
| MsG0780036297.01.T01 | AT4G38210 | 45.817 | 251 | 124 | 3 | 3 | 241 | 5 | 255 | 1.04e-74 | 228 |
| MsG0780036297.01.T01 | AT3G15370 | 45.255 | 274 | 110 | 7 | 7 | 240 | 8 | 281 | 4.56e-73 | 224 |
| MsG0780036297.01.T01 | AT2G20750 | 33.193 | 238 | 145 | 7 | 14 | 238 | 28 | 264 | 1.10e-32 | 120 |
| MsG0780036297.01.T01 | AT4G28250 | 33.465 | 254 | 149 | 10 | 1 | 238 | 8 | 257 | 1.27e-31 | 117 |
| MsG0780036297.01.T01 | AT4G28250 | 32.016 | 253 | 148 | 10 | 1 | 238 | 8 | 251 | 5.95e-28 | 107 |
| MsG0780036297.01.T01 | AT1G65680 | 32.456 | 228 | 135 | 9 | 23 | 235 | 44 | 267 | 1.24e-25 | 101 |
| MsG0780036297.01.T01 | AT2G20750 | 34.463 | 177 | 104 | 5 | 14 | 179 | 28 | 203 | 1.16e-24 | 97.8 |
| MsG0780036297.01.T01 | AT2G45110 | 30.859 | 256 | 143 | 11 | 1 | 235 | 11 | 253 | 3.21e-22 | 92.4 |
| MsG0780036297.01.T01 | AT1G65681 | 33.014 | 209 | 123 | 9 | 40 | 235 | 12 | 216 | 1.15e-21 | 90.1 |
| MsG0780036297.01.T01 | AT4G28250 | 32.487 | 197 | 111 | 8 | 1 | 184 | 8 | 195 | 6.61e-21 | 87.8 |
| MsG0780036297.01.T01 | AT4G28250 | 33.333 | 192 | 106 | 8 | 1 | 179 | 8 | 190 | 2.61e-20 | 86.3 |
| MsG0780036297.01.T01 | AT4G17030 | 30.455 | 220 | 142 | 8 | 25 | 235 | 26 | 243 | 7.63e-20 | 85.9 |
| MsG0780036297.01.T01 | AT3G60570 | 28.251 | 223 | 142 | 7 | 26 | 235 | 34 | 251 | 5.89e-18 | 80.9 |
| MsG0780036297.01.T01 | AT3G45970 | 26.667 | 210 | 128 | 9 | 44 | 235 | 14 | 215 | 1.88e-13 | 68.2 |
| MsG0780036297.01.T01 | AT3G45960 | 27.805 | 205 | 121 | 9 | 49 | 235 | 46 | 241 | 4.02e-12 | 64.7 |
| MsG0780036297.01.T01 | AT4G38400 | 26.768 | 198 | 132 | 9 | 49 | 235 | 47 | 242 | 1.54e-11 | 63.2 |
| MsG0780036297.01.T01 | AT3G45960 | 27.919 | 197 | 115 | 9 | 57 | 235 | 6 | 193 | 2.34e-11 | 62.0 |
| MsG0780036297.01.T01 | AT3G45970 | 25.854 | 205 | 126 | 9 | 49 | 235 | 46 | 242 | 6.04e-11 | 61.2 |
Find 90 sgRNAs with CRISPR-Local
Find 141 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAACCTTGTACTTTAATTAT+TGG | 0.154188 | 7:-6084481 | MsG0780036297.01.T01:three_prime_UTR |
| CAAAGTAACTCTTACCTTAA+TGG | 0.204631 | 7:-6085117 | MsG0780036297.01.T01:CDS |
| AATGCTCATGCTACTTTCTA+TGG | 0.220166 | 7:-6086564 | MsG0780036297.01.T01:CDS |
| TTTAAGTTGAGTAGTGTAAA+TGG | 0.236702 | 7:-6084720 | MsG0780036297.01.T01:three_prime_UTR |
| GCTCCTGCTGGATGGTCTTT+TGG | 0.239807 | 7:-6085033 | MsG0780036297.01.T01:CDS |
| ATAGGTGGGGCTTGTGGATA+TGG | 0.246425 | 7:-6086141 | MsG0780036297.01.T01:intron |
| TTCCATAACCTTGGCTATAA+AGG | 0.251122 | 7:+6086115 | None:intergenic |
| TACACGGTTTCTCATGTAAA+TGG | 0.251705 | 7:-6086612 | MsG0780036297.01.T01:CDS |
| AGGAAAGACTTTGTCCATTA+AGG | 0.266746 | 7:+6085103 | None:intergenic |
| TATTGGTTAATGAATGTAAA+AGG | 0.283242 | 7:-6084464 | MsG0780036297.01.T01:three_prime_UTR |
| TATGGTGGAAGTGATGCTTC+TGG | 0.307440 | 7:-6086546 | MsG0780036297.01.T01:CDS |
| TCTAGATCTTGAACCTTTGA+TGG | 0.316697 | 7:+6085176 | None:intergenic |
| ACCACCAGGTGGACAGAAAT+TGG | 0.328400 | 7:+6085969 | None:intergenic |
| GGCAAGCCATGTCAAGGAAT+TGG | 0.336529 | 7:-6085152 | MsG0780036297.01.T01:CDS |
| GCAAGCCATGTCAAGGAATT+GGG | 0.340806 | 7:-6085151 | MsG0780036297.01.T01:CDS |
| TCCACAAACAACTCCTTTCA+AGG | 0.341172 | 7:-6086765 | MsG0780036297.01.T01:intron |
| AACCTTTATAGCCAAGGTTA+TGG | 0.350030 | 7:-6086117 | MsG0780036297.01.T01:CDS |
| CAACTTTAAACCGTTTGAAC+CGG | 0.351388 | 7:+6084864 | None:intergenic |
| TCATTCAATGCTGCTCCTGC+TGG | 0.373533 | 7:-6085045 | MsG0780036297.01.T01:CDS |
| GAAAGATCAAAATGGTGATT+AGG | 0.383324 | 7:+6085934 | None:intergenic |
| TTAAGTTGAGTAGTGTAAAT+GGG | 0.411771 | 7:-6084719 | MsG0780036297.01.T01:three_prime_UTR |
| TTGTTAGTTCGCGGTTCAAC+TGG | 0.413358 | 7:+6084931 | None:intergenic |
| CCACGACTTGGAAGTTTCGC+TGG | 0.419367 | 7:-6084836 | MsG0780036297.01.T01:three_prime_UTR |
| TTAGTACTTGTCACAAATGT+TGG | 0.427387 | 7:-6085225 | MsG0780036297.01.T01:CDS |
| AAATGGGATTTATTAGTGTT+GGG | 0.427741 | 7:-6084703 | MsG0780036297.01.T01:three_prime_UTR |
| TAAATGGGATTTATTAGTGT+TGG | 0.429812 | 7:-6084704 | MsG0780036297.01.T01:three_prime_UTR |
| GGAATTAGATTCACCATCAA+TGG | 0.441161 | 7:-6085264 | MsG0780036297.01.T01:CDS |
| GTCACAAATGTTGGAGGTGC+TGG | 0.460146 | 7:-6085216 | MsG0780036297.01.T01:CDS |
| CTGTATTTGTTCCATAACCT+TGG | 0.469990 | 7:+6086106 | None:intergenic |
| TCGCTGGTTTGTTTCCGATT+CGG | 0.470517 | 7:-6084820 | MsG0780036297.01.T01:three_prime_UTR |
| TTTGTTGTCACCACAAGTAA+TGG | 0.472648 | 7:-6085081 | MsG0780036297.01.T01:CDS |
| CACATTGCTCAATATAGAGC+AGG | 0.475970 | 7:-6085895 | MsG0780036297.01.T01:CDS |
| GATCCACAATGGTGTAATCC+TGG | 0.478438 | 7:-6086012 | MsG0780036297.01.T01:CDS |
| ATGGTGGAAGTGATGCTTCT+GGG | 0.482585 | 7:-6086545 | MsG0780036297.01.T01:CDS |
| GTGAGATGCAAGAGAAGAGG+TGG | 0.483025 | 7:-6085285 | MsG0780036297.01.T01:CDS |
| GAAGTAAGAATGTCCATTGA+TGG | 0.484459 | 7:+6085251 | None:intergenic |
| TAGGTTGAGAAAGATCAAAA+TGG | 0.486595 | 7:+6085926 | None:intergenic |
| TGGTTTCATCCCGGTTCAAA+CGG | 0.490222 | 7:-6084874 | MsG0780036297.01.T01:three_prime_UTR |
| GTGTTGGGCTACTTAGAAGA+TGG | 0.492640 | 7:-6084688 | MsG0780036297.01.T01:three_prime_UTR |
| TCAAAGGTTCAAGATCTAGA+TGG | 0.498022 | 7:-6085173 | MsG0780036297.01.T01:CDS |
| AACTTTAAACCGTTTGAACC+GGG | 0.498524 | 7:+6084865 | None:intergenic |
| ACCTTGAAAGGAGTTGTTTG+TGG | 0.504549 | 7:+6086764 | None:intergenic |
| AGATCAAAATGGTGATTAGG+AGG | 0.519211 | 7:+6085937 | None:intergenic |
| GCAGTAACTATAATAGATCC+AGG | 0.520583 | 7:+6085994 | None:intergenic |
| AGCATTTGTAGATGATGTGC+TGG | 0.529065 | 7:-6084581 | MsG0780036297.01.T01:three_prime_UTR |
| TCAATGCTGCTCCTGCTGGA+TGG | 0.529981 | 7:-6085041 | MsG0780036297.01.T01:CDS |
| AAGTGATGCTTCTGGGACAA+TGG | 0.531264 | 7:-6086538 | MsG0780036297.01.T01:CDS |
| GCCACCAATTTCTGTCCACC+TGG | 0.533315 | 7:-6085973 | MsG0780036297.01.T01:CDS |
| AGTTACCTTCTGTAAGCTAC+AGG | 0.533493 | 7:+6085865 | None:intergenic |
| TCTTCGACATTGTTAGTTCG+CGG | 0.535901 | 7:+6084922 | None:intergenic |
| GTTTCTCATGTAAATGGCCG+TGG | 0.537626 | 7:-6086606 | MsG0780036297.01.T01:CDS |
| AGAAGAAGATGAACCTTGAA+AGG | 0.544689 | 7:+6086752 | None:intergenic |
| ATTCAACTGTGGTTTCATCC+CGG | 0.545414 | 7:-6084883 | MsG0780036297.01.T01:three_prime_UTR |
| AGGGTGAGATGCAAGAGAAG+AGG | 0.548973 | 7:-6085288 | MsG0780036297.01.T01:CDS |
| GTACTTGTCACAAATGTTGG+AGG | 0.553223 | 7:-6085222 | MsG0780036297.01.T01:CDS |
| GTACATTCTGTGGCCATCAA+AGG | 0.555005 | 7:-6085189 | MsG0780036297.01.T01:CDS |
| TATGGAAACCTTTATAGCCA+AGG | 0.558405 | 7:-6086123 | MsG0780036297.01.T01:CDS |
| AACATTAATCTTTCTCAACA+TGG | 0.558853 | 7:+6084521 | None:intergenic |
| TAACCAATAATTAAAGTACA+AGG | 0.564183 | 7:+6084478 | None:intergenic |
| AGTGATGCTTCTGGGACAAT+GGG | 0.566887 | 7:-6086537 | MsG0780036297.01.T01:intron |
| GCCGTGGTGGTCATGCTAGT+TGG | 0.567422 | 7:-6086590 | MsG0780036297.01.T01:CDS |
| ATTTCTGTCCACCTGGTGGT+TGG | 0.569910 | 7:-6085966 | MsG0780036297.01.T01:CDS |
| GTTGAACTGCCTTCCAGTGT+AGG | 0.570697 | 7:+6085005 | None:intergenic |
| GCTCATGCTACTTTCTATGG+TGG | 0.573969 | 7:-6086561 | MsG0780036297.01.T01:CDS |
| GGCAAGTTTCTCATTTGCTG+AGG | 0.575355 | 7:+6084542 | None:intergenic |
| CAAGCCATGTCAAGGAATTG+GGG | 0.577427 | 7:-6085150 | MsG0780036297.01.T01:CDS |
| GGGATGAAACCACAGTTGAA+TGG | 0.579533 | 7:+6084885 | None:intergenic |
| TGCTGGTGATGTACATTCTG+TGG | 0.583608 | 7:-6085199 | MsG0780036297.01.T01:CDS |
| AAAGTTGTTGAACCACGACT+TGG | 0.584301 | 7:-6084848 | MsG0780036297.01.T01:three_prime_UTR |
| TGACCAAAAGACCATCCAGC+AGG | 0.595163 | 7:+6085030 | None:intergenic |
| GGAGGGTCACACCAACCACC+AGG | 0.606947 | 7:+6085955 | None:intergenic |
| TTGGTCAGACCTACACTGGA+AGG | 0.609630 | 7:-6085014 | MsG0780036297.01.T01:CDS |
| CTAGATGGCAAGCCATGTCA+AGG | 0.612177 | 7:-6085158 | MsG0780036297.01.T01:CDS |
| ACCAATTTCTGTCCACCTGG+TGG | 0.612750 | 7:-6085970 | MsG0780036297.01.T01:CDS |
| TTCAACAATGGATTGAGTTG+TGG | 0.619250 | 7:-6086063 | MsG0780036297.01.T01:CDS |
| AGCACTGCACTATTCAACAA+TGG | 0.624923 | 7:-6086075 | MsG0780036297.01.T01:CDS |
| GATCCAGGATTACACCATTG+TGG | 0.626873 | 7:+6086009 | None:intergenic |
| TTGTACCTGTAGCTTACAGA+AGG | 0.627293 | 7:-6085870 | MsG0780036297.01.T01:intron |
| ACCAGGTGGACAGAAATTGG+TGG | 0.636241 | 7:+6085972 | None:intergenic |
| CCAGCGAAACTTCCAAGTCG+TGG | 0.639837 | 7:+6084836 | None:intergenic |
| GATCAAAATGGTGATTAGGA+GGG | 0.641492 | 7:+6085938 | None:intergenic |
| ACATTGCTCAATATAGAGCA+GGG | 0.646744 | 7:-6085894 | MsG0780036297.01.T01:CDS |
| ATTACTTGTGGTGACAACAA+AGG | 0.647547 | 7:+6085083 | None:intergenic |
| TCTCATGTAAATGGCCGTGG+TGG | 0.654852 | 7:-6086603 | MsG0780036297.01.T01:CDS |
| GGGTCACACCAACCACCAGG+TGG | 0.687412 | 7:+6085958 | None:intergenic |
| AAGCCATGTCAAGGAATTGG+GGG | 0.694892 | 7:-6085149 | MsG0780036297.01.T01:CDS |
| TCCAACTAGCATGACCACCA+CGG | 0.698213 | 7:+6086589 | None:intergenic |
| CACAAGTAATGGTCACAGTG+TGG | 0.698815 | 7:-6085070 | MsG0780036297.01.T01:CDS |
| CACACTGTGACCATTACTTG+TGG | 0.700863 | 7:+6085071 | None:intergenic |
| AATGTGTGAATGATCCACAA+TGG | 0.752509 | 7:-6086023 | MsG0780036297.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATATATATAATAAAAAA+GGG | + | Chr7:6086586-6086605 | None:intergenic | 0.0% |
| !!! | TAATAACATTTTTCTTTTAT+AGG | - | Chr7:6085051-6085070 | MsG0780036297.01.T01:CDS | 10.0% |
| !!! | TTGATTTTGATTTTATTATA+TGG | - | Chr7:6086604-6086623 | MsG0780036297.01.T01:CDS | 10.0% |
| !!! | TTGTTTTTGTAAAATAAAAT+TGG | - | Chr7:6085447-6085466 | MsG0780036297.01.T01:intron | 10.0% |
| !!! | ACGAAACTTTTTTATTTTTT+TGG | + | Chr7:6085722-6085741 | None:intergenic | 15.0% |
| !! | TAACCAATAATTAAAGTACA+AGG | + | Chr7:6086735-6086754 | None:intergenic | 20.0% |
| !! | TAACCTTGTACTTTAATTAT+TGG | - | Chr7:6086729-6086748 | MsG0780036297.01.T01:intron | 20.0% |
| !! | TTTATCTGAAAACAAGTTTA+TGG | - | Chr7:6085512-6085531 | MsG0780036297.01.T01:intron | 20.0% |
| !!! | AACATTTTTCTTTTATAGGT+GGG | - | Chr7:6085055-6085074 | MsG0780036297.01.T01:CDS | 20.0% |
| !!! | AGAATTTATTTTGTGTATGT+CGG | + | Chr7:6085824-6085843 | None:intergenic | 20.0% |
| !!! | GATAATTTTCTTTTTGTTCT+TGG | - | Chr7:6085892-6085911 | MsG0780036297.01.T01:CDS | 20.0% |
| !!! | TAACATTTTTCTTTTATAGG+TGG | - | Chr7:6085054-6085073 | MsG0780036297.01.T01:CDS | 20.0% |
| !!! | TATTGGTTAATGAATGTAAA+AGG | - | Chr7:6086746-6086765 | MsG0780036297.01.T01:intron | 20.0% |
| !!! | TGTATAGTAACTTTTATGTT+AGG | + | Chr7:6085758-6085777 | None:intergenic | 20.0% |
| ! | AAATGGGATTTATTAGTGTT+GGG | - | Chr7:6086507-6086526 | MsG0780036297.01.T01:intron | 25.0% |
| ! | AACATTAATCTTTCTCAACA+TGG | + | Chr7:6086692-6086711 | None:intergenic | 25.0% |
| ! | ATAAATTTCATGAAGTCACA+CGG | + | Chr7:6084928-6084947 | None:intergenic | 25.0% |
| ! | TAAATGGGATTTATTAGTGT+TGG | - | Chr7:6086506-6086525 | MsG0780036297.01.T01:intron | 25.0% |
| ! | TATAGTAAAACGAAGTTTGA+AGG | - | Chr7:6085783-6085802 | MsG0780036297.01.T01:intron | 25.0% |
| ! | TGCCTCAAAAAAAAAAAGAA+GGG | + | Chr7:6086553-6086572 | None:intergenic | 25.0% |
| ! | TTGCCTCAAAAAAAAAAAGA+AGG | + | Chr7:6086554-6086573 | None:intergenic | 25.0% |
| ! | TTTGAAGATAAAGTCGATTA+TGG | - | Chr7:6085590-6085609 | MsG0780036297.01.T01:intron | 25.0% |
| !! | ACATTTTTCTTTTATAGGTG+GGG | - | Chr7:6085056-6085075 | MsG0780036297.01.T01:CDS | 25.0% |
| !! | TGAATGAAGTTTTCATGATT+TGG | + | Chr7:6085626-6085645 | None:intergenic | 25.0% |
| !! | TTCAGAAAGCAAACAAATTT+TGG | - | Chr7:6084825-6084844 | MsG0780036297.01.T01:three_prime_UTR | 25.0% |
| !! | TTTTGTTCTTGGATTTTGAA+GGG | - | Chr7:6085903-6085922 | MsG0780036297.01.T01:CDS | 25.0% |
| !! | TTTTTGTTCTTGGATTTTGA+AGG | - | Chr7:6085902-6085921 | MsG0780036297.01.T01:CDS | 25.0% |
| !!! | AAGTAACTTTTTAGCTATCT+AGG | + | Chr7:6085561-6085580 | None:intergenic | 25.0% |
| !!! | CAACATTTTAAAAACCGAAT+CGG | + | Chr7:6086407-6086426 | None:intergenic | 25.0% |
| !!! | CTTTTTTTTTTTGAGGCAAA+TGG | - | Chr7:6086555-6086574 | MsG0780036297.01.T01:CDS | 25.0% |
| !!! | GCATTTCAACGATTTTTTTA+CGG | + | Chr7:6084969-6084988 | None:intergenic | 25.0% |
| !!! | GTTTTTAAAACTGAATCGAA+CGG | - | Chr7:6086251-6086270 | MsG0780036297.01.T01:intron | 25.0% |
| !!! | TCGATTCAGTTTTAAAAACA+TGG | + | Chr7:6086250-6086269 | None:intergenic | 25.0% |
| !!! | TTAAGTTGAGTAGTGTAAAT+GGG | - | Chr7:6086491-6086510 | MsG0780036297.01.T01:intron | 25.0% |
| !!! | TTATTTTAACCATTCAACTG+TGG | - | Chr7:6086316-6086335 | MsG0780036297.01.T01:intron | 25.0% |
| !!! | TTTAAGTTGAGTAGTGTAAA+TGG | - | Chr7:6086490-6086509 | MsG0780036297.01.T01:intron | 25.0% |
| AACAAACATCTTAACGAACT+TGG | - | Chr7:6084738-6084757 | MsG0780036297.01.T01:three_prime_UTR | 30.0% | |
| ACAAGTGAAAGAAAAAAGAG+AGG | + | Chr7:6084511-6084530 | None:intergenic | 30.0% | |
| CAAAGTAACTCTTACCTTAA+TGG | - | Chr7:6086093-6086112 | MsG0780036297.01.T01:CDS | 30.0% | |
| GAAAGATCAAAATGGTGATT+AGG | + | Chr7:6085279-6085298 | None:intergenic | 30.0% | |
| GACTTGAAATGATTGATGTT+TGG | - | Chr7:6085661-6085680 | MsG0780036297.01.T01:intron | 30.0% | |
| TCTCTATGCTTCATTTATGT+AGG | - | Chr7:6084538-6084557 | MsG0780036297.01.T01:three_prime_UTR | 30.0% | |
| TGAGCAATGTGTTGAAAAAT+AGG | + | Chr7:6085306-6085325 | None:intergenic | 30.0% | |
| TTAGTACTTGTCACAAATGT+TGG | - | Chr7:6085985-6086004 | MsG0780036297.01.T01:CDS | 30.0% | |
| TTTACGGTTGAAGATTTCTA+CGG | + | Chr7:6084953-6084972 | None:intergenic | 30.0% | |
| ! | TAGGTTGAGAAAGATCAAAA+TGG | + | Chr7:6085287-6085306 | None:intergenic | 30.0% |
| ! | TTTTGTGTGCATTGTGTATT+TGG | - | Chr7:6085403-6085422 | MsG0780036297.01.T01:intron | 30.0% |
| !!! | AGCCCTTCTTTTTTTTTTTG+AGG | - | Chr7:6086548-6086567 | MsG0780036297.01.T01:CDS | 30.0% |
| !!! | TCTTCTTGCTATTTTCTACA+CGG | - | Chr7:6084582-6084601 | MsG0780036297.01.T01:three_prime_UTR | 30.0% |
| AACCTTTATAGCCAAGGTTA+TGG | - | Chr7:6085093-6085112 | MsG0780036297.01.T01:CDS | 35.0% | |
| AACTTTAAACCGTTTGAACC+GGG | + | Chr7:6086348-6086367 | None:intergenic | 35.0% | |
| AATGTGTGAATGATCCACAA+TGG | - | Chr7:6085187-6085206 | MsG0780036297.01.T01:CDS | 35.0% | |
| ACATTGCTCAATATAGAGCA+GGG | - | Chr7:6085316-6085335 | MsG0780036297.01.T01:intron | 35.0% | |
| AGAAGAAGATGAACCTTGAA+AGG | + | Chr7:6084461-6084480 | None:intergenic | 35.0% | |
| AGATCAAAATGGTGATTAGG+AGG | + | Chr7:6085276-6085295 | None:intergenic | 35.0% | |
| AGGAAAGACTTTGTCCATTA+AGG | + | Chr7:6086110-6086129 | None:intergenic | 35.0% | |
| ATTACTTGTGGTGACAACAA+AGG | + | Chr7:6086130-6086149 | None:intergenic | 35.0% | |
| CAACTTTAAACCGTTTGAAC+CGG | + | Chr7:6086349-6086368 | None:intergenic | 35.0% | |
| CTGTATTTGTTCCATAACCT+TGG | + | Chr7:6085107-6085126 | None:intergenic | 35.0% | |
| GAAGTAAGAATGTCCATTGA+TGG | + | Chr7:6085962-6085981 | None:intergenic | 35.0% | |
| GACAGTGAAGATTTCAAACT+TGG | + | Chr7:6084873-6084892 | None:intergenic | 35.0% | |
| GATCAAAATGGTGATTAGGA+GGG | + | Chr7:6085275-6085294 | None:intergenic | 35.0% | |
| GCAGTAACTATAATAGATCC+AGG | + | Chr7:6085219-6085238 | None:intergenic | 35.0% | |
| GGAATTAGATTCACCATCAA+TGG | - | Chr7:6085946-6085965 | MsG0780036297.01.T01:CDS | 35.0% | |
| TACACGGTTTCTCATGTAAA+TGG | - | Chr7:6084598-6084617 | MsG0780036297.01.T01:three_prime_UTR | 35.0% | |
| TATGGAAACCTTTATAGCCA+AGG | - | Chr7:6085087-6085106 | MsG0780036297.01.T01:CDS | 35.0% | |
| TCAAAGGTTCAAGATCTAGA+TGG | - | Chr7:6086037-6086056 | MsG0780036297.01.T01:CDS | 35.0% | |
| TCTAGATCTTGAACCTTTGA+TGG | + | Chr7:6086037-6086056 | None:intergenic | 35.0% | |
| TTCCATAACCTTGGCTATAA+AGG | + | Chr7:6085098-6085117 | None:intergenic | 35.0% | |
| ! | TTTGTTGTCACCACAAGTAA+TGG | - | Chr7:6086129-6086148 | MsG0780036297.01.T01:CDS | 35.0% |
| !! | AATGCTCATGCTACTTTCTA+TGG | - | Chr7:6084646-6084665 | MsG0780036297.01.T01:three_prime_UTR | 35.0% |
| !! | TTCAACAATGGATTGAGTTG+TGG | - | Chr7:6085147-6085166 | MsG0780036297.01.T01:CDS | 35.0% |
| !!! | AGTGTGTGCTTGGTTTTTTA+GGG | + | Chr7:6085858-6085877 | None:intergenic | 35.0% |
| !!! | TAGTGTGTGCTTGGTTTTTT+AGG | + | Chr7:6085859-6085878 | None:intergenic | 35.0% |
| AAAGTTGTTGAACCACGACT+TGG | - | Chr7:6086362-6086381 | MsG0780036297.01.T01:intron | 40.0% | |
| ACCTTGAAAGGAGTTGTTTG+TGG | + | Chr7:6084449-6084468 | None:intergenic | 40.0% | |
| AGCACTGCACTATTCAACAA+TGG | - | Chr7:6085135-6085154 | MsG0780036297.01.T01:CDS | 40.0% | |
| AGCATTTGTAGATGATGTGC+TGG | - | Chr7:6086629-6086648 | MsG0780036297.01.T01:CDS | 40.0% | |
| AGTTACCTTCTGTAAGCTAC+AGG | + | Chr7:6085348-6085367 | None:intergenic | 40.0% | |
| AGTTCATGCAGACAACACAT+TGG | - | Chr7:6084777-6084796 | MsG0780036297.01.T01:three_prime_UTR | 40.0% | |
| ATTCAACTGTGGTTTCATCC+CGG | - | Chr7:6086327-6086346 | MsG0780036297.01.T01:intron | 40.0% | |
| CACATTGCTCAATATAGAGC+AGG | - | Chr7:6085315-6085334 | MsG0780036297.01.T01:intron | 40.0% | |
| CTTAACGAACTTGGAGTAAC+CGG | - | Chr7:6084747-6084766 | MsG0780036297.01.T01:three_prime_UTR | 40.0% | |
| GTACTTGTCACAAATGTTGG+AGG | - | Chr7:6085988-6086007 | MsG0780036297.01.T01:CDS | 40.0% | |
| TCAAGACTATAGTGTGTGCT+TGG | + | Chr7:6085868-6085887 | None:intergenic | 40.0% | |
| TCTTCGACATTGTTAGTTCG+CGG | + | Chr7:6086291-6086310 | None:intergenic | 40.0% | |
| TTGTACCTGTAGCTTACAGA+AGG | - | Chr7:6085340-6085359 | MsG0780036297.01.T01:intron | 40.0% | |
| AAGCCATGTCAAGGAATTGG+GGG | - | Chr7:6086061-6086080 | MsG0780036297.01.T01:CDS | 45.0% | |
| CAAGCCATGTCAAGGAATTG+GGG | - | Chr7:6086060-6086079 | MsG0780036297.01.T01:CDS | 45.0% | |
| CAAGGAATTGGGGGCAAAAT+TGG | - | Chr7:6086070-6086089 | MsG0780036297.01.T01:CDS | 45.0% | |
| CACAAGTAATGGTCACAGTG+TGG | - | Chr7:6086140-6086159 | MsG0780036297.01.T01:CDS | 45.0% | |
| CACACTGTGACCATTACTTG+TGG | + | Chr7:6086142-6086161 | None:intergenic | 45.0% | |
| GACAACACATTGGTCATCGT+TGG | - | Chr7:6084787-6084806 | MsG0780036297.01.T01:three_prime_UTR | 45.0% | |
| GATCCACAATGGTGTAATCC+TGG | - | Chr7:6085198-6085217 | MsG0780036297.01.T01:CDS | 45.0% | |
| GATCCAGGATTACACCATTG+TGG | + | Chr7:6085204-6085223 | None:intergenic | 45.0% | |
| GCAAGCCATGTCAAGGAATT+GGG | - | Chr7:6086059-6086078 | MsG0780036297.01.T01:CDS | 45.0% | |
| GGGATGAAACCACAGTTGAA+TGG | + | Chr7:6086328-6086347 | None:intergenic | 45.0% | |
| GTACATTCTGTGGCCATCAA+AGG | - | Chr7:6086021-6086040 | MsG0780036297.01.T01:CDS | 45.0% | |
| GTGTTGGGCTACTTAGAAGA+TGG | - | Chr7:6086522-6086541 | MsG0780036297.01.T01:intron | 45.0% | |
| GTTTCTCATGTAAATGGCCG+TGG | - | Chr7:6084604-6084623 | MsG0780036297.01.T01:three_prime_UTR | 45.0% | |
| TCTGCATGAACTTGTGACTC+CGG | + | Chr7:6084769-6084788 | None:intergenic | 45.0% | |
| TGGTTTCATCCCGGTTCAAA+CGG | - | Chr7:6086336-6086355 | MsG0780036297.01.T01:intron | 45.0% | |
| TTGTTAGTTCGCGGTTCAAC+TGG | + | Chr7:6086282-6086301 | None:intergenic | 45.0% | |
| ! | ATGGTGGAAGTGATGCTTCT+GGG | - | Chr7:6084665-6084684 | MsG0780036297.01.T01:three_prime_UTR | 45.0% |
| ! | GGCAAGTTTCTCATTTGCTG+AGG | + | Chr7:6086671-6086690 | None:intergenic | 45.0% |
| ! | TATGGTGGAAGTGATGCTTC+TGG | - | Chr7:6084664-6084683 | MsG0780036297.01.T01:three_prime_UTR | 45.0% |
| ! | TCTTTTATAGGTGGGGCTTG+TGG | - | Chr7:6085063-6085082 | MsG0780036297.01.T01:CDS | 45.0% |
| ! | TCTTTTGGTCAGACCTACAC+TGG | - | Chr7:6086192-6086211 | MsG0780036297.01.T01:intron | 45.0% |
| ! | TGCTGGTGATGTACATTCTG+TGG | - | Chr7:6086011-6086030 | MsG0780036297.01.T01:CDS | 45.0% |
| !! | AAGTGATGCTTCTGGGACAA+TGG | - | Chr7:6084672-6084691 | MsG0780036297.01.T01:three_prime_UTR | 45.0% |
| !! | AGTGATGCTTCTGGGACAAT+GGG | - | Chr7:6084673-6084692 | MsG0780036297.01.T01:three_prime_UTR | 45.0% |
| !! | GCTCATGCTACTTTCTATGG+TGG | - | Chr7:6084649-6084668 | MsG0780036297.01.T01:three_prime_UTR | 45.0% |
| !! | TCGCTGGTTTGTTTCCGATT+CGG | - | Chr7:6086390-6086409 | MsG0780036297.01.T01:intron | 45.0% |
| !! | CAAAATATATATAATAAAAA+AGG | + | Chr7:6086587-6086606 | None:intergenic | 5.0% |
| ACCAATTTCTGTCCACCTGG+TGG | - | Chr7:6085240-6085259 | MsG0780036297.01.T01:CDS | 50.0% | |
| ACCACCAGGTGGACAGAAAT+TGG | + | Chr7:6085244-6085263 | None:intergenic | 50.0% | |
| ACCAGGTGGACAGAAATTGG+TGG | + | Chr7:6085241-6085260 | None:intergenic | 50.0% | |
| AGGGTGAGATGCAAGAGAAG+AGG | - | Chr7:6085922-6085941 | MsG0780036297.01.T01:CDS | 50.0% | |
| ATAGGTGGGGCTTGTGGATA+TGG | - | Chr7:6085069-6085088 | MsG0780036297.01.T01:CDS | 50.0% | |
| ATTTCTGTCCACCTGGTGGT+TGG | - | Chr7:6085244-6085263 | MsG0780036297.01.T01:CDS | 50.0% | |
| CGATCCAACGACTACTGATG+TGG | - | Chr7:6084899-6084918 | MsG0780036297.01.T01:three_prime_UTR | 50.0% | |
| CTAGATGGCAAGCCATGTCA+AGG | - | Chr7:6086052-6086071 | MsG0780036297.01.T01:CDS | 50.0% | |
| GGCAAGCCATGTCAAGGAAT+TGG | - | Chr7:6086058-6086077 | MsG0780036297.01.T01:CDS | 50.0% | |
| GTCACCACATCAGTAGTCGT+TGG | + | Chr7:6084906-6084925 | None:intergenic | 50.0% | |
| GTGAGATGCAAGAGAAGAGG+TGG | - | Chr7:6085925-6085944 | MsG0780036297.01.T01:CDS | 50.0% | |
| GTTGAACTGCCTTCCAGTGT+AGG | + | Chr7:6086208-6086227 | None:intergenic | 50.0% | |
| TCATTCAATGCTGCTCCTGC+TGG | - | Chr7:6086165-6086184 | MsG0780036297.01.T01:intron | 50.0% | |
| TCCAACTAGCATGACCACCA+CGG | + | Chr7:6084624-6084643 | None:intergenic | 50.0% | |
| TCTCATGTAAATGGCCGTGG+TGG | - | Chr7:6084607-6084626 | MsG0780036297.01.T01:three_prime_UTR | 50.0% | |
| TGACCAAAAGACCATCCAGC+AGG | + | Chr7:6086183-6086202 | None:intergenic | 50.0% | |
| TTGCCCCCAATTCCTTGACA+TGG | + | Chr7:6086067-6086086 | None:intergenic | 50.0% | |
| TTGGTCAGACCTACACTGGA+AGG | - | Chr7:6086196-6086215 | MsG0780036297.01.T01:intron | 50.0% | |
| ! | GTCACAAATGTTGGAGGTGC+TGG | - | Chr7:6085994-6086013 | MsG0780036297.01.T01:CDS | 50.0% |
| CCAGCGAAACTTCCAAGTCG+TGG | + | Chr7:6086377-6086396 | None:intergenic | 55.0% | |
| GCCACCAATTTCTGTCCACC+TGG | - | Chr7:6085237-6085256 | MsG0780036297.01.T01:CDS | 55.0% | |
| TCAATGCTGCTCCTGCTGGA+TGG | - | Chr7:6086169-6086188 | MsG0780036297.01.T01:intron | 55.0% | |
| ! | CCACGACTTGGAAGTTTCGC+TGG | - | Chr7:6086374-6086393 | MsG0780036297.01.T01:intron | 55.0% |
| ! | GCTCCTGCTGGATGGTCTTT+TGG | - | Chr7:6086177-6086196 | MsG0780036297.01.T01:intron | 55.0% |
| GCCGTGGTGGTCATGCTAGT+TGG | - | Chr7:6084620-6084639 | MsG0780036297.01.T01:three_prime_UTR | 60.0% | |
| GGAGGGTCACACCAACCACC+AGG | + | Chr7:6085258-6085277 | None:intergenic | 65.0% | |
| GGGTCACACCAACCACCAGG+TGG | + | Chr7:6085255-6085274 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 6084446 | 6086786 | 6084446 | ID=MsG0780036297.01;Name=MsG0780036297.01 |
| Chr7 | mRNA | 6084446 | 6086786 | 6084446 | ID=MsG0780036297.01.T01;Parent=MsG0780036297.01;Name=MsG0780036297.01.T01;_AED=0.34;_eAED=0.34;_QI=26|1|1|1|0.66|0.5|4|553|242 |
| Chr7 | exon | 6084446 | 6085308 | 6084446 | ID=MsG0780036297.01.T01:exon:3279;Parent=MsG0780036297.01.T01 |
| Chr7 | exon | 6085871 | 6086159 | 6085871 | ID=MsG0780036297.01.T01:exon:3278;Parent=MsG0780036297.01.T01 |
| Chr7 | exon | 6086538 | 6086672 | 6086538 | ID=MsG0780036297.01.T01:exon:3277;Parent=MsG0780036297.01.T01 |
| Chr7 | exon | 6086766 | 6086786 | 6086766 | ID=MsG0780036297.01.T01:exon:3276;Parent=MsG0780036297.01.T01 |
| Chr7 | five_prime_UTR | 6086766 | 6086786 | 6086766 | ID=MsG0780036297.01.T01:five_prime_utr;Parent=MsG0780036297.01.T01 |
| Chr7 | five_prime_UTR | 6086668 | 6086672 | 6086668 | ID=MsG0780036297.01.T01:five_prime_utr;Parent=MsG0780036297.01.T01 |
| Chr7 | CDS | 6086538 | 6086667 | 6086538 | ID=MsG0780036297.01.T01:cds;Parent=MsG0780036297.01.T01 |
| Chr7 | CDS | 6085871 | 6086159 | 6085871 | ID=MsG0780036297.01.T01:cds;Parent=MsG0780036297.01.T01 |
| Chr7 | CDS | 6084999 | 6085308 | 6084999 | ID=MsG0780036297.01.T01:cds;Parent=MsG0780036297.01.T01 |
| Chr7 | three_prime_UTR | 6084446 | 6084998 | 6084446 | ID=MsG0780036297.01.T01:three_prime_utr;Parent=MsG0780036297.01.T01 |
| Gene Sequence |
| Protein sequence |
