Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040422.01.T01 | XP_003625034.1 | 96.27 | 429 | 10 | 3 | 1 | 426 | 1 | 426 | 0 | 843 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040422.01.T01 | Q9FLE8 | 32.105 | 380 | 218 | 13 | 64 | 425 | 32 | 389 | 1.70E-47 | 170 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040422.01.T01 | A2Q2Z6 | 96.270 | 429 | 10 | 3 | 1 | 426 | 1 | 426 | 0.0 | 843 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048849.01 | MsG0780040422.01 | 0.806764 | 7.019367e-50 | 3.841863e-47 |
| MsG0080048878.01 | MsG0780040422.01 | 0.809813 | 1.571945e-50 | 9.321688e-48 |
| MsG0180003353.01 | MsG0780040422.01 | 0.803269 | 3.778443e-49 | 1.890526e-46 |
| MsG0180003885.01 | MsG0780040422.01 | 0.805892 | 1.072024e-49 | 5.738134e-47 |
| MsG0180004046.01 | MsG0780040422.01 | 0.825211 | 5.304215e-54 | 4.803823e-51 |
| MsG0180004466.01 | MsG0780040422.01 | 0.814091 | 1.838082e-51 | 1.221749e-48 |
| MsG0180005153.01 | MsG0780040422.01 | 0.800495 | 1.403102e-48 | 6.542682e-46 |
| MsG0180006004.01 | MsG0780040422.01 | 0.800634 | 1.314382e-48 | 6.150682e-46 |
| MsG0180006031.01 | MsG0780040422.01 | 0.808404 | 3.148854e-50 | 1.798907e-47 |
| MsG0180006096.01 | MsG0780040422.01 | 0.814677 | 1.363685e-51 | 9.209539e-49 |
| MsG0780040422.01 | MsG0780040430.01 | 0.804814 | 1.802893e-49 | 9.387051e-47 |
| MsG0780040422.01 | MsG0880044005.01 | 0.821374 | 4.176538e-53 | 3.391746e-50 |
| MsG0780040422.01 | MsG0880047538.01 | 0.823399 | 1.414603e-53 | 1.216531e-50 |
| MsG0380011844.01 | MsG0780040422.01 | 0.811543 | 6.641151e-51 | 4.122424e-48 |
| MsG0380012122.01 | MsG0780040422.01 | 0.817050 | 4.030932e-52 | 2.904636e-49 |
| MsG0680031939.01 | MsG0780040422.01 | 0.843593 | 1.273603e-58 | 2.002586e-55 |
| MsG0480018584.01 | MsG0780040422.01 | 0.802907 | 4.490459e-49 | 2.226108e-46 |
| MsG0480018911.01 | MsG0780040422.01 | 0.806999 | 6.261006e-50 | 3.447681e-47 |
| MsG0480020889.01 | MsG0780040422.01 | 0.803266 | 3.783166e-49 | 1.892740e-46 |
| MsG0480021037.01 | MsG0780040422.01 | 0.802099 | 6.588427e-49 | 3.199542e-46 |
| MsG0380015870.01 | MsG0780040422.01 | 0.802576 | 5.255348e-49 | 2.583317e-46 |
| MsG0380016540.01 | MsG0780040422.01 | 0.801536 | 8.598622e-49 | 4.116536e-46 |
| MsG0580026175.01 | MsG0780040422.01 | 0.804919 | 1.714324e-49 | 8.950355e-47 |
| MsG0580028630.01 | MsG0780040422.01 | 0.813500 | 2.480321e-51 | 1.622546e-48 |
| MsG0580029736.01 | MsG0780040422.01 | 0.802473 | 5.517171e-49 | 2.705011e-46 |
| MsG0280007903.01 | MsG0780040422.01 | 0.803705 | 3.068004e-49 | 1.552327e-46 |
| MsG0280010503.01 | MsG0780040422.01 | 0.806716 | 7.185166e-50 | 3.927774e-47 |
| MsG0680035859.01 | MsG0780040422.01 | 0.808973 | 2.380763e-50 | 1.380509e-47 |
| MsG0780036486.01 | MsG0780040422.01 | 0.809508 | 1.827626e-50 | 1.075042e-47 |
| MsG0780036659.01 | MsG0780040422.01 | 0.824440 | 8.064895e-54 | 7.143604e-51 |
| MsG0780037093.01 | MsG0780040422.01 | 0.804839 | 1.781945e-49 | 9.283883e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040422.01.T01 | MTR_7g090230 | 96.270 | 429 | 10 | 3 | 1 | 426 | 1 | 426 | 0.0 | 843 |
| MsG0780040422.01.T01 | MTR_1g051180 | 53.182 | 440 | 117 | 11 | 1 | 426 | 1 | 365 | 1.62e-133 | 388 |
| MsG0780040422.01.T01 | MTR_8g038440 | 65.806 | 155 | 51 | 1 | 273 | 425 | 101 | 255 | 1.91e-69 | 221 |
| MsG0780040422.01.T01 | MTR_3g017490 | 63.158 | 152 | 55 | 1 | 273 | 424 | 110 | 260 | 3.32e-68 | 218 |
| MsG0780040422.01.T01 | MTR_7g104720 | 34.184 | 392 | 209 | 12 | 75 | 425 | 22 | 405 | 6.52e-50 | 174 |
| MsG0780040422.01.T01 | MTR_3g465550 | 47.305 | 167 | 84 | 3 | 256 | 420 | 64 | 228 | 1.79e-48 | 165 |
| MsG0780040422.01.T01 | MTR_5g083110 | 52.229 | 157 | 72 | 3 | 268 | 424 | 85 | 238 | 5.07e-48 | 164 |
| MsG0780040422.01.T01 | MTR_5g072400 | 40.284 | 211 | 116 | 4 | 221 | 424 | 46 | 253 | 5.91e-46 | 159 |
| MsG0780040422.01.T01 | MTR_6g011640 | 28.995 | 438 | 192 | 14 | 64 | 425 | 3 | 397 | 6.57e-44 | 158 |
| MsG0780040422.01.T01 | MTR_7g010090 | 31.092 | 357 | 162 | 13 | 90 | 425 | 139 | 432 | 1.71e-39 | 147 |
| MsG0780040422.01.T01 | MTR_7g106500 | 45.000 | 160 | 78 | 2 | 274 | 425 | 122 | 279 | 5.81e-39 | 142 |
| MsG0780040422.01.T01 | MTR_3g071510 | 43.617 | 188 | 97 | 6 | 239 | 424 | 54 | 234 | 6.43e-39 | 140 |
| MsG0780040422.01.T01 | MTR_1g090400 | 43.709 | 151 | 82 | 2 | 274 | 424 | 221 | 368 | 1.61e-37 | 140 |
| MsG0780040422.01.T01 | MTR_8g099665 | 39.752 | 161 | 83 | 3 | 274 | 424 | 211 | 367 | 6.32e-33 | 127 |
| MsG0780040422.01.T01 | MTR_8g106900 | 41.667 | 156 | 85 | 4 | 274 | 424 | 119 | 273 | 2.89e-31 | 121 |
| MsG0780040422.01.T01 | MTR_3g030520 | 39.241 | 158 | 79 | 3 | 285 | 425 | 142 | 299 | 5.65e-27 | 110 |
| MsG0780040422.01.T01 | MTR_5g048870 | 40.230 | 87 | 50 | 1 | 279 | 363 | 70 | 156 | 5.88e-14 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040422.01.T01 | AT2G41330 | 50.256 | 390 | 153 | 10 | 53 | 425 | 36 | 401 | 3.86e-113 | 338 |
| MsG0780040422.01.T01 | AT3G57070 | 48.990 | 396 | 173 | 8 | 48 | 425 | 32 | 416 | 1.62e-112 | 337 |
| MsG0780040422.01.T01 | AT5G13810 | 64.162 | 173 | 60 | 2 | 254 | 426 | 104 | 274 | 1.62e-72 | 229 |
| MsG0780040422.01.T01 | AT5G39865 | 32.105 | 380 | 218 | 13 | 64 | 425 | 32 | 389 | 1.73e-48 | 170 |
| MsG0780040422.01.T01 | AT5G58530 | 47.500 | 160 | 74 | 3 | 273 | 424 | 108 | 265 | 5.24e-44 | 155 |
| MsG0780040422.01.T01 | AT5G03870 | 31.472 | 394 | 190 | 14 | 76 | 424 | 25 | 383 | 4.06e-40 | 147 |
| MsG0780040422.01.T01 | AT5G06470 | 42.405 | 158 | 80 | 3 | 274 | 424 | 85 | 238 | 1.59e-37 | 137 |
| MsG0780040422.01.T01 | AT3G28850 | 42.045 | 176 | 73 | 3 | 279 | 425 | 252 | 427 | 3.99e-37 | 140 |
| MsG0780040422.01.T01 | AT4G10630 | 31.165 | 369 | 173 | 14 | 75 | 424 | 27 | 333 | 4.20e-37 | 138 |
| MsG0780040422.01.T01 | AT1G64500 | 42.405 | 158 | 84 | 2 | 274 | 424 | 208 | 365 | 2.55e-36 | 137 |
| MsG0780040422.01.T01 | AT1G32760 | 42.197 | 173 | 92 | 4 | 258 | 424 | 143 | 313 | 7.67e-34 | 129 |
| MsG0780040422.01.T01 | AT3G11773 | 42.857 | 140 | 76 | 3 | 285 | 424 | 14 | 149 | 2.51e-33 | 122 |
| MsG0780040422.01.T01 | AT5G01420 | 38.816 | 152 | 89 | 3 | 274 | 424 | 252 | 400 | 2.26e-30 | 121 |
| MsG0780040422.01.T01 | AT3G11773 | 41.071 | 112 | 62 | 3 | 313 | 424 | 92 | 199 | 1.15e-22 | 95.5 |
Find 55 sgRNAs with CRISPR-Local
Find 84 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTGTTTCTGTTAGCAACTA+TGG | 0.271791 | 7:-77364603 | None:intergenic |
| TTTCAATGGATTCATCTTAT+AGG | 0.287479 | 7:+77365521 | MsG0780040422.01.T01:CDS |
| TGTGTTCATTGTAATGAAAA+TGG | 0.321593 | 7:+77365802 | MsG0780040422.01.T01:CDS |
| TGATCATGAGGGGTAAAGTT+AGG | 0.340853 | 7:-77364860 | None:intergenic |
| TTGAAACAATTGAATGAATC+TGG | 0.363003 | 7:+77365634 | MsG0780040422.01.T01:CDS |
| AGAAGCTTTGCTTGCTAAGT+TGG | 0.365047 | 7:+77365213 | MsG0780040422.01.T01:CDS |
| TGTTTATCTGAGAAACTCAT+TGG | 0.370099 | 7:-77365034 | None:intergenic |
| AAAGAAGAACAAGGATTCAT+AGG | 0.402640 | 7:-77365346 | None:intergenic |
| GATGAATAAGAGGCATTGTA+AGG | 0.415383 | 7:-77364748 | None:intergenic |
| AAAGAAACAGAAGGTGTTGT+TGG | 0.422488 | 7:-77364632 | None:intergenic |
| TTTCAGATGTGTAAGGTCAA+TGG | 0.435956 | 7:+77365315 | MsG0780040422.01.T01:CDS |
| TCACTCACTTCCACTACCTA+TGG | 0.439023 | 7:+77364809 | MsG0780040422.01.T01:CDS |
| GTGAGATGGGGTTGATCATG+AGG | 0.444128 | 7:-77364872 | None:intergenic |
| GTTGGAGGGTGATGAATAAG+AGG | 0.449999 | 7:-77364758 | None:intergenic |
| GTAATAATTGCAATGGTAGC+AGG | 0.462789 | 7:+77365743 | MsG0780040422.01.T01:CDS |
| CTGTAACTCCAAGCAACACT+TGG | 0.466501 | 7:-77365238 | None:intergenic |
| AAGAACAAGGTAAATTGAAA+AGG | 0.483693 | 7:+77365779 | MsG0780040422.01.T01:CDS |
| CATCAACACTTGGGAACTCA+TGG | 0.487477 | 7:+77364940 | MsG0780040422.01.T01:CDS |
| AGTTGGATCCAAGTGTTGCT+TGG | 0.490779 | 7:+77365230 | MsG0780040422.01.T01:CDS |
| CTACCATTGCAATTATTACA+AGG | 0.490905 | 7:-77365739 | None:intergenic |
| CAAGTGTTGATGACAGAATC+TGG | 0.492141 | 7:-77364929 | None:intergenic |
| CAGATTCTGTCATCAACACT+TGG | 0.496185 | 7:+77364930 | MsG0780040422.01.T01:CDS |
| TTGACCTTACACATCTGAAA+AGG | 0.497664 | 7:-77365312 | None:intergenic |
| GAGAAGAGAACCATAGGTAG+TGG | 0.505781 | 7:-77364819 | None:intergenic |
| GATCATGAGGGGTAAAGTTA+GGG | 0.512539 | 7:-77364859 | None:intergenic |
| TGGTAGCAGGAAAGTGTTTG+AGG | 0.513533 | 7:+77365756 | MsG0780040422.01.T01:CDS |
| AATGGATTCATCTTATAGGA+AGG | 0.527593 | 7:+77365525 | MsG0780040422.01.T01:CDS |
| TGAGATGGGGTTGATCATGA+GGG | 0.532269 | 7:-77364871 | None:intergenic |
| TGATGAAAGAGATATTTCAA+TGG | 0.533526 | 7:+77365507 | MsG0780040422.01.T01:CDS |
| AATTAGGAGAAGAGAACCAT+AGG | 0.536814 | 7:-77364825 | None:intergenic |
| ATCAGTAGTGACATTGCCAC+AGG | 0.554763 | 7:+77365573 | MsG0780040422.01.T01:CDS |
| AAAATCTCAAGAAACCACTT+TGG | 0.555258 | 7:+77365176 | MsG0780040422.01.T01:CDS |
| GAAGATTGAAAAGAAACAGA+AGG | 0.555642 | 7:-77364641 | None:intergenic |
| AAGGAGTTGCAGAATGCACT+TGG | 0.559200 | 7:+77365544 | MsG0780040422.01.T01:CDS |
| TCTGATAAATGCTGCCAAAG+TGG | 0.561325 | 7:-77365190 | None:intergenic |
| TAGTGGAAGTGAGTGAAACA+AGG | 0.572068 | 7:-77364802 | None:intergenic |
| ACAAACCAAGGATCTTGAGT+TGG | 0.577028 | 7:-77365685 | None:intergenic |
| CAGATAAACACAGTTCATGC+AGG | 0.580945 | 7:+77365047 | MsG0780040422.01.T01:CDS |
| GAGTTGCAGAATGCACTTGG+TGG | 0.581868 | 7:+77365547 | MsG0780040422.01.T01:CDS |
| GAATTAGCTAGAATGTTGAA+AGG | 0.590447 | 7:+77365658 | MsG0780040422.01.T01:CDS |
| AACACTTGGGAACTCATGGA+TGG | 0.595857 | 7:+77364944 | MsG0780040422.01.T01:CDS |
| TGGTTTGTTTGTGACAAATG+TGG | 0.596999 | 7:+77365700 | MsG0780040422.01.T01:CDS |
| TTTATCAGAGGGAAGCATGT+GGG | 0.599499 | 7:+77365598 | MsG0780040422.01.T01:CDS |
| GAAATCTTCAGAAACAGTGA+TGG | 0.600720 | 7:+77365126 | MsG0780040422.01.T01:CDS |
| GTGCCTTGTAATAATTGCAA+TGG | 0.616885 | 7:+77365736 | MsG0780040422.01.T01:CDS |
| ATGAATAAGAGGCATTGTAA+GGG | 0.620378 | 7:-77364747 | None:intergenic |
| GCATTGTCATCAAGACAACT+AGG | 0.624676 | 7:+77365265 | MsG0780040422.01.T01:CDS |
| GTTTATTGCACAAGTTTGCG+AGG | 0.649260 | 7:+77365418 | MsG0780040422.01.T01:CDS |
| AGATTCTGTCATCAACACTT+GGG | 0.657274 | 7:+77364931 | MsG0780040422.01.T01:CDS |
| CATTTGTCACAAACAAACCA+AGG | 0.669189 | 7:-77365697 | None:intergenic |
| TTATCAAACAAAGAAGAACA+AGG | 0.689315 | 7:-77365355 | None:intergenic |
| GAGATGGGGTTGATCATGAG+GGG | 0.692266 | 7:-77364870 | None:intergenic |
| ATGAAGATTGTTGTGCAGTG+AGG | 0.704749 | 7:+77365455 | MsG0780040422.01.T01:CDS |
| AAAGTGTTTGAGGAAGAACA+AGG | 0.708450 | 7:+77365766 | MsG0780040422.01.T01:CDS |
| TTGTCATCAAGACAACTAGG+TGG | 0.763609 | 7:+77365268 | MsG0780040422.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AAGAACAAGGTAAATTGAAA+AGG | + | Chr7:77365779-77365798 | MsG0780040422.01.T01:CDS | 25.0% |
| ! | TGATGAAAGAGATATTTCAA+TGG | + | Chr7:77365507-77365526 | MsG0780040422.01.T01:CDS | 25.0% |
| ! | TGTGTTCATTGTAATGAAAA+TGG | + | Chr7:77365802-77365821 | MsG0780040422.01.T01:CDS | 25.0% |
| ! | TTATCAAACAAAGAAGAACA+AGG | - | Chr7:77365358-77365377 | None:intergenic | 25.0% |
| ! | TTGAAACAATTGAATGAATC+TGG | + | Chr7:77365634-77365653 | MsG0780040422.01.T01:CDS | 25.0% |
| !! | TTTCAATGGATTCATCTTAT+AGG | + | Chr7:77365521-77365540 | MsG0780040422.01.T01:CDS | 25.0% |
| !!! | TGGTTTCTTGAGATTTTTTT+TGG | - | Chr7:77365173-77365192 | None:intergenic | 25.0% |
| !!! | TTCTTCATTTTGAGAAGTTT+TGG | - | Chr7:77364897-77364916 | None:intergenic | 25.0% |
| AAAATCTCAAGAAACCACTT+TGG | + | Chr7:77365176-77365195 | MsG0780040422.01.T01:CDS | 30.0% | |
| AAAGAAGAACAAGGATTCAT+AGG | - | Chr7:77365349-77365368 | None:intergenic | 30.0% | |
| ACTCATTGGATTGTCAAAAA+AGG | - | Chr7:77365023-77365042 | None:intergenic | 30.0% | |
| ATTGGATTGTCAAAAAAGGA+AGG | - | Chr7:77365019-77365038 | None:intergenic | 30.0% | |
| CTACCATTGCAATTATTACA+AGG | - | Chr7:77365742-77365761 | None:intergenic | 30.0% | |
| GAAGATTGAAAAGAAACAGA+AGG | - | Chr7:77364644-77364663 | None:intergenic | 30.0% | |
| GAATTAGCTAGAATGTTGAA+AGG | + | Chr7:77365658-77365677 | MsG0780040422.01.T01:CDS | 30.0% | |
| TGTTTATCTGAGAAACTCAT+TGG | - | Chr7:77365037-77365056 | None:intergenic | 30.0% | |
| ! | AATGGATTCATCTTATAGGA+AGG | + | Chr7:77365525-77365544 | MsG0780040422.01.T01:CDS | 30.0% |
| !! | ATGAATAAGAGGCATTGTAA+GGG | - | Chr7:77364750-77364769 | None:intergenic | 30.0% |
| !!! | AACTATGGTTGTTGTTTTTG+AGG | - | Chr7:77364591-77364610 | None:intergenic | 30.0% |
| AATTAGGAGAAGAGAACCAT+AGG | - | Chr7:77364828-77364847 | None:intergenic | 35.0% | |
| AGATTCTGTCATCAACACTT+GGG | + | Chr7:77364931-77364950 | MsG0780040422.01.T01:CDS | 35.0% | |
| CATTTGTCACAAACAAACCA+AGG | - | Chr7:77365700-77365719 | None:intergenic | 35.0% | |
| GAAATCTTCAGAAACAGTGA+TGG | + | Chr7:77365126-77365145 | MsG0780040422.01.T01:CDS | 35.0% | |
| GTAATAATTGCAATGGTAGC+AGG | + | Chr7:77365743-77365762 | MsG0780040422.01.T01:CDS | 35.0% | |
| GTGCCTTGTAATAATTGCAA+TGG | + | Chr7:77365736-77365755 | MsG0780040422.01.T01:CDS | 35.0% | |
| TTGACCTTACACATCTGAAA+AGG | - | Chr7:77365315-77365334 | None:intergenic | 35.0% | |
| TTTCAGATGTGTAAGGTCAA+TGG | + | Chr7:77365315-77365334 | MsG0780040422.01.T01:CDS | 35.0% | |
| ! | AAAGTGTTTGAGGAAGAACA+AGG | + | Chr7:77365766-77365785 | MsG0780040422.01.T01:CDS | 35.0% |
| ! | AAGAGTTTGTGTCTTTTACC+TGG | + | Chr7:77365376-77365395 | MsG0780040422.01.T01:CDS | 35.0% |
| ! | ACTATTCTGTTTTCAGTACC+AGG | - | Chr7:77365397-77365416 | None:intergenic | 35.0% |
| ! | AGAACCTTTTCAGATGTGTA+AGG | + | Chr7:77365308-77365327 | MsG0780040422.01.T01:CDS | 35.0% |
| ! | TGTGTTTCTGTTAGCAACTA+TGG | - | Chr7:77364606-77364625 | None:intergenic | 35.0% |
| !! | AAAGAAACAGAAGGTGTTGT+TGG | - | Chr7:77364635-77364654 | None:intergenic | 35.0% |
| !! | GATGAATAAGAGGCATTGTA+AGG | - | Chr7:77364751-77364770 | None:intergenic | 35.0% |
| !! | TAGGGACTTTTTGGTCAATT+AGG | - | Chr7:77364844-77364863 | None:intergenic | 35.0% |
| !! | TGGTTTGTTTGTGACAAATG+TGG | + | Chr7:77365700-77365719 | MsG0780040422.01.T01:CDS | 35.0% |
| !! | TTGAGAAGTTTTGGTGAGAT+GGG | - | Chr7:77364888-77364907 | None:intergenic | 35.0% |
| !! | TTTGAGAAGTTTTGGTGAGA+TGG | - | Chr7:77364889-77364908 | None:intergenic | 35.0% |
| ACAAACCAAGGATCTTGAGT+TGG | - | Chr7:77365688-77365707 | None:intergenic | 40.0% | |
| ATGAAGATTGTTGTGCAGTG+AGG | + | Chr7:77365455-77365474 | MsG0780040422.01.T01:CDS | 40.0% | |
| CAGATAAACACAGTTCATGC+AGG | + | Chr7:77365047-77365066 | MsG0780040422.01.T01:CDS | 40.0% | |
| CAGATTCTGTCATCAACACT+TGG | + | Chr7:77364930-77364949 | MsG0780040422.01.T01:CDS | 40.0% | |
| GATCATGAGGGGTAAAGTTA+GGG | - | Chr7:77364862-77364881 | None:intergenic | 40.0% | |
| GCATTGTCATCAAGACAACT+AGG | + | Chr7:77365265-77365284 | MsG0780040422.01.T01:CDS | 40.0% | |
| GTTTATTGCACAAGTTTGCG+AGG | + | Chr7:77365418-77365437 | MsG0780040422.01.T01:CDS | 40.0% | |
| TAGTGGAAGTGAGTGAAACA+AGG | - | Chr7:77364805-77364824 | None:intergenic | 40.0% | |
| TCTGATAAATGCTGCCAAAG+TGG | - | Chr7:77365193-77365212 | None:intergenic | 40.0% | |
| TGATCATGAGGGGTAAAGTT+AGG | - | Chr7:77364863-77364882 | None:intergenic | 40.0% | |
| TTCCCTCTGATAAAAACCTG+TGG | - | Chr7:77365592-77365611 | None:intergenic | 40.0% | |
| TTGTCATCAAGACAACTAGG+TGG | + | Chr7:77365268-77365287 | MsG0780040422.01.T01:CDS | 40.0% | |
| ! | AGAAGCTTTGCTTGCTAAGT+TGG | + | Chr7:77365213-77365232 | MsG0780040422.01.T01:CDS | 40.0% |
| ! | AGGGACAAAGCTTTTCTAAC+TGG | - | Chr7:77364731-77364750 | None:intergenic | 40.0% |
| ! | GACAAAGCTTTTCTAACTGG+TGG | - | Chr7:77364728-77364747 | None:intergenic | 40.0% |
| ! | GGGTAAAGTTAGGGACTTTT+TGG | - | Chr7:77364853-77364872 | None:intergenic | 40.0% |
| ! | GTTTTCCAACTCAAGATCCT+TGG | + | Chr7:77365680-77365699 | MsG0780040422.01.T01:CDS | 40.0% |
| ! | TGCAGGTACACAACTTTTGA+TGG | + | Chr7:77365064-77365083 | MsG0780040422.01.T01:CDS | 40.0% |
| ! | TGCAGTGAGGATGATTTTGA+GGG | + | Chr7:77365468-77365487 | MsG0780040422.01.T01:CDS | 40.0% |
| ! | TGCCACAGGTTTTTATCAGA+GGG | + | Chr7:77365587-77365606 | MsG0780040422.01.T01:CDS | 40.0% |
| ! | TTGCCACAGGTTTTTATCAG+AGG | + | Chr7:77365586-77365605 | MsG0780040422.01.T01:CDS | 40.0% |
| ! | TTTATCAGAGGGAAGCATGT+GGG | + | Chr7:77365598-77365617 | MsG0780040422.01.T01:CDS | 40.0% |
| !! | CAAGTGTTGATGACAGAATC+TGG | - | Chr7:77364932-77364951 | None:intergenic | 40.0% |
| !! | TGAGAAGTTTTGGTGAGATG+GGG | - | Chr7:77364887-77364906 | None:intergenic | 40.0% |
| !! | TTTTATCAGAGGGAAGCATG+TGG | + | Chr7:77365597-77365616 | MsG0780040422.01.T01:CDS | 40.0% |
| !!! | GTGATGAGTGTCACCTTTTT+TGG | - | Chr7:77364783-77364802 | None:intergenic | 40.0% |
| !!! | TGAGTGTCACCTTTTTTGGT+TGG | - | Chr7:77364779-77364798 | None:intergenic | 40.0% |
| !!! | TGTCACCTTTTTTGGTTGGA+GGG | - | Chr7:77364775-77364794 | None:intergenic | 40.0% |
| AACACTTGGGAACTCATGGA+TGG | + | Chr7:77364944-77364963 | MsG0780040422.01.T01:CDS | 45.0% | |
| AAGGAGTTGCAGAATGCACT+TGG | + | Chr7:77365544-77365563 | MsG0780040422.01.T01:CDS | 45.0% | |
| ATCAGTAGTGACATTGCCAC+AGG | + | Chr7:77365573-77365592 | MsG0780040422.01.T01:CDS | 45.0% | |
| CATCAACACTTGGGAACTCA+TGG | + | Chr7:77364940-77364959 | MsG0780040422.01.T01:CDS | 45.0% | |
| CATCACCCTCCAACCAAAAA+AGG | + | Chr7:77364767-77364786 | MsG0780040422.01.T01:CDS | 45.0% | |
| CTGTAACTCCAAGCAACACT+TGG | - | Chr7:77365241-77365260 | None:intergenic | 45.0% | |
| GAGAAGAGAACCATAGGTAG+TGG | - | Chr7:77364822-77364841 | None:intergenic | 45.0% | |
| GTTGGAGGGTGATGAATAAG+AGG | - | Chr7:77364761-77364780 | None:intergenic | 45.0% | |
| TCACTCACTTCCACTACCTA+TGG | + | Chr7:77364809-77364828 | MsG0780040422.01.T01:CDS | 45.0% | |
| ! | AGTTGGATCCAAGTGTTGCT+TGG | + | Chr7:77365230-77365249 | MsG0780040422.01.T01:CDS | 45.0% |
| ! | GCAGTGAGGATGATTTTGAG+GGG | + | Chr7:77365469-77365488 | MsG0780040422.01.T01:CDS | 45.0% |
| ! | GTGCAGTGAGGATGATTTTG+AGG | + | Chr7:77365467-77365486 | MsG0780040422.01.T01:CDS | 45.0% |
| ! | TGAGATGGGGTTGATCATGA+GGG | - | Chr7:77364874-77364893 | None:intergenic | 45.0% |
| !! | TGGTAGCAGGAAAGTGTTTG+AGG | + | Chr7:77365756-77365775 | MsG0780040422.01.T01:CDS | 45.0% |
| !!! | GTGTCACCTTTTTTGGTTGG+AGG | - | Chr7:77364776-77364795 | None:intergenic | 45.0% |
| GAGTTGCAGAATGCACTTGG+TGG | + | Chr7:77365547-77365566 | MsG0780040422.01.T01:CDS | 50.0% | |
| ! | GAGATGGGGTTGATCATGAG+GGG | - | Chr7:77364873-77364892 | None:intergenic | 50.0% |
| ! | GTGAGATGGGGTTGATCATG+AGG | - | Chr7:77364875-77364894 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 77364575 | 77365855 | 77364575 | ID=MsG0780040422.01;Name=MsG0780040422.01 |
| Chr7 | mRNA | 77364575 | 77365855 | 77364575 | ID=MsG0780040422.01.T01;Parent=MsG0780040422.01;Name=MsG0780040422.01.T01;_AED=0.20;_eAED=0.20;_QI=0|-1|0|1|-1|1|1|0|426 |
| Chr7 | exon | 77364575 | 77365855 | 77364575 | ID=MsG0780040422.01.T01:exon:15288;Parent=MsG0780040422.01.T01 |
| Chr7 | CDS | 77364575 | 77365855 | 77364575 | ID=MsG0780040422.01.T01:cds;Parent=MsG0780040422.01.T01 |
| Gene Sequence |
| Protein sequence |
