AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480021037.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021037.01.T01 MTR_4g064780 76.842 380 51 4 14 357 378 756 0.0 564
MsG0480021037.01.T01 MTR_2g097700 64.872 390 99 5 5 357 345 733 8.61e-170 495
MsG0480021037.01.T01 MTR_4g064780 67.547 265 49 4 14 242 378 641 7.82e-107 329
MsG0480021037.01.T01 MTR_5g013940 57.988 169 37 3 240 385 20 177 1.94e-59 191
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021037.01.T01 AT3G46740 63.684 380 101 3 14 357 392 770 1.66e-166 488
MsG0480021037.01.T01 AT4G09080 49.593 369 126 8 28 357 1 348 1.52e-107 323
MsG0480021037.01.T01 AT4G09080 49.593 369 126 8 28 357 12 359 3.50e-107 322
MsG0480021037.01.T01 AT4G09080 72.500 200 55 0 158 357 78 277 1.59e-104 312
MsG0480021037.01.T01 AT1G35860 41.691 343 129 8 23 357 97 376 6.36e-67 218
MsG0480021037.01.T01 AT3G44160 36.478 159 82 6 200 355 164 306 3.01e-14 73.9

Find 115 sgRNAs with CRISPR-Local

Find 320 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTTCTTGACTTGGCTATT+TGG 0.150211 4:-52466202 MsG0480021037.01.T01:CDS
TATTACCTCGAGGATGTTTC+TGG 0.196346 4:+52464469 None:intergenic
CGTCAGAGTAAATTCACTTA+TGG 0.227562 4:-52466122 MsG0480021037.01.T01:CDS
CTATAGGTTACTCTCAAAAT+TGG 0.240843 4:-52463972 MsG0480021037.01.T01:intron
TCTTCTTGACTTGGCTATTT+GGG 0.263184 4:-52466201 MsG0480021037.01.T01:CDS
CTAGTTGTTTGCAGAAGATT+AGG 0.270089 4:-52467284 MsG0480021037.01.T01:CDS
GATTGAATAGATCTCTTTAC+TGG 0.281779 4:-52466599 MsG0480021037.01.T01:CDS
AGGCATAGGCATTGATGATT+TGG 0.326565 4:-52466470 MsG0480021037.01.T01:CDS
GAAACTGAGTCAAAGTTAAT+TGG 0.330853 4:+52464657 None:intergenic
CTCAAAATCTTTCTCCAAAT+CGG 0.339518 4:+52464120 None:intergenic
TACACGTGTGTACCTTTAAT+AGG 0.361255 4:+52464315 None:intergenic
TTGACAAAACAGCTTCTTCC+GGG 0.371613 4:-52466978 MsG0480021037.01.T01:intron
TGCAGAACATGGCACCGATC+TGG 0.371964 4:-52464286 MsG0480021037.01.T01:CDS
GTTGACAAAACAGCTTCTTC+CGG 0.385306 4:-52466979 MsG0480021037.01.T01:intron
TGGAAGCAGGAACATGTTCC+AGG 0.393764 4:-52465904 MsG0480021037.01.T01:intron
ACTGAGTGGAGTATTGTTCC+TGG 0.398835 4:-52466789 MsG0480021037.01.T01:CDS
CCAGTACCACTGAGGGTTGT+TGG 0.404945 4:+52465999 None:intergenic
GTTGTAACCCCTTACAGAAT+AGG 0.411697 4:+52464511 None:intergenic
CTTCCCTCATTCTTCTCATC+AGG 0.414103 4:+52466867 None:intergenic
TAGTTGTTTGCAGAAGATTA+GGG 0.415830 4:-52467283 MsG0480021037.01.T01:CDS
TTGTAACCCCTTACAGAATA+GGG 0.418439 4:+52464512 None:intergenic
AATTGGTGACGGTTAAAGAA+TGG 0.420841 4:+52464674 None:intergenic
CTTCCTCCACAGACTTCAAC+TGG 0.424159 4:+52464633 None:intergenic
GAGGTACGTATACCTATTAA+AGG 0.424670 4:-52464327 MsG0480021037.01.T01:CDS
GGTTACAACATGGGTGAGAT+TGG 0.425561 4:-52464497 MsG0480021037.01.T01:CDS
CTTGTCCTCCATGGTCACTA+TGG 0.425624 4:-52464584 MsG0480021037.01.T01:CDS
ACCATTGGAACAGATATGAT+TGG 0.428498 4:+52466064 None:intergenic
AGTCTATAGGAGAATGGGCC+AGG 0.434550 4:-52464230 MsG0480021037.01.T01:CDS
ATTGGTGACGGTTAAAGAAT+GGG 0.436136 4:+52464675 None:intergenic
GAAATCCGACAGAAGTCTAT+AGG 0.441636 4:-52464243 MsG0480021037.01.T01:CDS
ACATTAGTTTCTTCTTGACT+TGG 0.444486 4:-52466210 MsG0480021037.01.T01:intron
CTGCAGGCTTCGCTTCAGCC+AGG 0.449356 4:-52466657 MsG0480021037.01.T01:intron
TAAAGAGTTGGAGCAGAAAT+CGG 0.456777 4:-52466824 MsG0480021037.01.T01:CDS
GCAGAACATGGCACCGATCT+GGG 0.459483 4:-52464285 MsG0480021037.01.T01:CDS
TGAGATTAAGCTTAAAGAGT+TGG 0.462130 4:-52466836 MsG0480021037.01.T01:CDS
CCAACAACCCTCAGTGGTAC+TGG 0.463318 4:-52465999 MsG0480021037.01.T01:CDS
GTTTGCAGAAGATTAGGGAT+AGG 0.464120 4:-52467278 MsG0480021037.01.T01:CDS
AAGGGGATGTTGAGTAAGCA+AGG 0.465253 4:-52467318 None:intergenic
TCTGCACTAATTCCTCCATT+AGG 0.471078 4:+52466029 None:intergenic
GGTCAAAGAGTATTGCCTAA+TGG 0.474904 4:-52466044 MsG0480021037.01.T01:CDS
AGGCAATACTCTTTGACCAT+TGG 0.475159 4:+52466049 None:intergenic
TTTGTGAACGGAGCTATAGT+TGG 0.480304 4:-52465924 MsG0480021037.01.T01:CDS
GGATGTTGAGTAAGCAAGGG+AGG 0.483099 4:-52467314 MsG0480021037.01.T01:CDS
CCGCGGATTCCCTTCAATGT+TGG 0.485045 4:+52466890 None:intergenic
ATTCACTTATGGATTAGTAA+TGG 0.488117 4:-52466111 MsG0480021037.01.T01:CDS
GTTACTCTCAAAATTGGTGT+AGG 0.488813 4:-52463966 MsG0480021037.01.T01:CDS
TTTGCAGAAGATTAGGGATA+GGG 0.489353 4:-52467277 MsG0480021037.01.T01:intron
TGGAGTATTGTTCCTGGGCG+AGG 0.491841 4:-52466783 MsG0480021037.01.T01:CDS
TTCGCCGCAAATACCAAAGT+TGG 0.492832 4:+52466753 None:intergenic
GACAGAAGTCTATAGGAGAA+TGG 0.493137 4:-52464236 MsG0480021037.01.T01:CDS
GTATTGTTCCTGGGCGAGGA+GGG 0.493554 4:-52466779 MsG0480021037.01.T01:CDS
ACAGAAGTCTATAGGAGAAT+GGG 0.495381 4:-52464235 MsG0480021037.01.T01:CDS
GCGAGGAGGGCGTCCAACTT+TGG 0.496872 4:-52466766 MsG0480021037.01.T01:intron
GTTTCTCCAGTTGAAGTCTG+TGG 0.496953 4:-52464639 MsG0480021037.01.T01:CDS
CTTCCTACAGCTGGCAGCTG+AGG 0.508063 4:-52464346 MsG0480021037.01.T01:intron
AAGCTGGGAAACAAGCTTTG+AGG 0.509682 4:-52466938 MsG0480021037.01.T01:CDS
TTCTGTAAGGGGTTACAACA+TGG 0.513783 4:-52464507 MsG0480021037.01.T01:CDS
TCATTCTTCTCATCAGGCCG+CGG 0.514700 4:+52466873 None:intergenic
CATCTTTGAACTTCCCAGAT+CGG 0.516610 4:+52464272 None:intergenic
TTACTCTCAAAATTGGTGTA+GGG 0.517563 4:-52463965 MsG0480021037.01.T01:CDS
GGACTATTACATTTGAACAT+AGG 0.519926 4:-52466632 MsG0480021037.01.T01:CDS
TCAAAACTGCAGGTAGATCA+AGG 0.521033 4:-52464719 MsG0480021037.01.T01:intron
CTGCAGGTAGATCAAGGCCT+TGG 0.525854 4:-52464713 MsG0480021037.01.T01:intron
ACCAATCATATCTGTTCCAA+TGG 0.531948 4:-52466065 MsG0480021037.01.T01:CDS
AGAGTAAAAGCATCATAACT+TGG 0.532470 4:+52464542 None:intergenic
TGGTACTGGTATCGATAAGA+TGG 0.535826 4:-52465985 MsG0480021037.01.T01:CDS
AATGGAGGAATTAGTGCAGA+TGG 0.543155 4:-52466026 MsG0480021037.01.T01:CDS
GTTGGACGCCCTCCTCGCCC+AGG 0.555798 4:+52466771 None:intergenic
CCACCAGTGCTTGTCCTCCA+TGG 0.557742 4:-52464593 MsG0480021037.01.T01:CDS
AGGACAAGCACTGGTGGTGG+TGG 0.558995 4:+52464599 None:intergenic
CAGGCTTCGCTTCAGCCAGG+AGG 0.559209 4:-52466654 MsG0480021037.01.T01:CDS
GATGTTGAGTAAGCAAGGGA+GGG 0.559985 4:-52467313 MsG0480021037.01.T01:CDS
GTGTATGCCTTTGCAGAACA+TGG 0.566174 4:-52464297 MsG0480021037.01.T01:CDS
GGTCACTATGGTGGTTGTGT+AGG 0.572314 4:-52464572 MsG0480021037.01.T01:CDS
AGGCTTCGCTTCAGCCAGGA+GGG 0.573416 4:-52466653 MsG0480021037.01.T01:CDS
AAGTCTGTGGAGGAAGGTGC+TGG 0.575143 4:-52464626 MsG0480021037.01.T01:CDS
ATTCTCCTATAGACTTCTGT+CGG 0.578259 4:+52464238 None:intergenic
GAGTCAAAGTTAATTGGTGA+CGG 0.579143 4:+52464663 None:intergenic
CAATGTTGGAAAACAAAGCA+AGG 0.580068 4:+52466904 None:intergenic
CAGTTGAAGTCTGTGGAGGA+AGG 0.582370 4:-52464632 MsG0480021037.01.T01:CDS
CTGAGTGGAGTATTGTTCCT+GGG 0.582646 4:-52466788 MsG0480021037.01.T01:CDS
GTAGATCAAGGCCTTGGTGT+TGG 0.582725 4:-52464707 MsG0480021037.01.T01:CDS
AGTATTGTTCCTGGGCGAGG+AGG 0.583721 4:-52466780 MsG0480021037.01.T01:CDS
AGTTATCAATAGTAGACCGC+AGG 0.583946 4:+52463912 None:intergenic
AGGGGATGTTGAGTAAGCAA+GGG 0.584583 4:-52467317 None:intergenic
GCGGCCTGATGAGAAGAATG+AGG 0.586532 4:-52466871 MsG0480021037.01.T01:CDS
TCAAATGTAATAGTCCCTCC+TGG 0.588321 4:+52466639 None:intergenic
ACGGAGCTATAGTTGGAAGC+AGG 0.591154 4:-52465917 MsG0480021037.01.T01:CDS
CGGCCTGATGAGAAGAATGA+GGG 0.591730 4:-52466870 MsG0480021037.01.T01:CDS
ATCGGTGCCATGTTCTGCAA+AGG 0.594290 4:+52464290 None:intergenic
CACAACCACCATAGTGACCA+TGG 0.599148 4:+52464576 None:intergenic
GGGAAGTTCAAAGATGTCAA+AGG 0.599661 4:-52464265 MsG0480021037.01.T01:CDS
TGACCATGGAGGACAAGCAC+TGG 0.609873 4:+52464590 None:intergenic
TTTACAAGCTAATATTACAA+GGG 0.614814 4:-52465958 MsG0480021037.01.T01:CDS
GTCCTCCATGGTCACTATGG+TGG 0.615702 4:-52464581 MsG0480021037.01.T01:CDS
GTCTATAGGAGAATGGGCCA+GGG 0.620727 4:-52464229 MsG0480021037.01.T01:intron
CAAAGAGTATTGCCTAATGG+AGG 0.624544 4:-52466041 MsG0480021037.01.T01:CDS
TCTGTAAGGGGTTACAACAT+GGG 0.625335 4:-52464506 MsG0480021037.01.T01:CDS
GTACCACTGAGGGTTGTTGG+AGG 0.632265 4:+52466002 None:intergenic
TCTCCAGTTGAAGTCTGTGG+AGG 0.634494 4:-52464636 MsG0480021037.01.T01:CDS
TGGAGGACAAGCACTGGTGG+TGG 0.638082 4:+52464596 None:intergenic
ATCGATACCAGTACCACTGA+GGG 0.640712 4:+52465992 None:intergenic
TTTGAACATAGGAATCTGCA+AGG 0.642514 4:-52466621 MsG0480021037.01.T01:CDS
AATGTTGGAAAACAAAGCAA+GGG 0.649560 4:+52466905 None:intergenic
CCAACATTGAAGGGAATCCG+CGG 0.650853 4:-52466890 MsG0480021037.01.T01:CDS
GGAAATTGCTGCCAACACCA+AGG 0.665668 4:+52464696 None:intergenic
CCATGGAGGACAAGCACTGG+TGG 0.671793 4:+52464593 None:intergenic
TCAATGTTAAAAGTATGACC+CGG 0.683764 4:+52466960 None:intergenic
GATAACACAAGGTTTGTGAA+CGG 0.685190 4:-52465936 MsG0480021037.01.T01:CDS
GGACCTCCAACAACCCTCAG+TGG 0.685641 4:-52466005 MsG0480021037.01.T01:CDS
GGACTGAAGTTAGTACTGAG+TGG 0.688762 4:-52466803 MsG0480021037.01.T01:CDS
ATATTACAAGGGATAACACA+AGG 0.704360 4:-52465947 MsG0480021037.01.T01:CDS
TATCGATACCAGTACCACTG+AGG 0.732661 4:+52465991 None:intergenic
AGCAGCCAGAAACATCCTCG+AGG 0.763048 4:-52464474 MsG0480021037.01.T01:intron
AACCACCATAGTGACCATGG+AGG 0.809946 4:+52464579 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGAACAAGTATAATAAAA+TGG + Chr4:52464723-52464742 None:intergenic 15.0%
!! AAGAACAAGTATAATAAAAT+GGG + Chr4:52464722-52464741 None:intergenic 15.0%
!! ATAAAATAGATATTATCGAA+AGG + Chr4:52465572-52465591 None:intergenic 15.0%
!! ATTTAAATTCTAACCAAAAA+TGG + Chr4:52465448-52465467 None:intergenic 15.0%
!!! AAAGGATTTTGAAAATATTT+GGG + Chr4:52465554-52465573 None:intergenic 15.0%
!!! AGAAACAAAATTAACATTTT+GGG + Chr4:52465387-52465406 None:intergenic 15.0%
!!! TAGAAACAAAATTAACATTT+TGG + Chr4:52465388-52465407 None:intergenic 15.0%
!!! TCATTGAATATTCAATTTTT+TGG - Chr4:52464079-52464098 MsG0480021037.01.T01:intron 15.0%
!! AAATTAGAAGTCTTAGAATA+TGG + Chr4:52466099-52466118 None:intergenic 20.0%
!! AATTTAAATCTAGACTAAAG+TGG - Chr4:52465459-52465478 MsG0480021037.01.T01:intron 20.0%
!! AGAACAAGTATAATAAAATG+GGG + Chr4:52464721-52464740 None:intergenic 20.0%
!! ATATCAACAGCAATAATTAT+AGG + Chr4:52465361-52465380 None:intergenic 20.0%
!! ATTTAAATCTAGACTAAAGT+GGG - Chr4:52465460-52465479 MsG0480021037.01.T01:intron 20.0%
!! TTTACAAGCTAATATTACAA+GGG - Chr4:52465271-52465290 MsG0480021037.01.T01:intron 20.0%
!!! ACTATTTTACTGTAACTTTA+AGG - Chr4:52466406-52466425 MsG0480021037.01.T01:intron 20.0%
!!! ATGATTGTGATTTTTTATAG+TGG - Chr4:52466214-52466233 MsG0480021037.01.T01:intron 20.0%
!!! GAAAGGATTTTGAAAATATT+TGG + Chr4:52465555-52465574 None:intergenic 20.0%
!!! TATAATTATTGCTGTTGATA+TGG - Chr4:52465360-52465379 MsG0480021037.01.T01:intron 20.0%
!!! TATGGTTATTGTTTTTTGAT+TGG - Chr4:52464208-52464227 MsG0480021037.01.T01:intron 20.0%
!!! TGATTGTGATTTTTTATAGT+GGG - Chr4:52466215-52466234 MsG0480021037.01.T01:intron 20.0%
!!! TTTTACAAGCTAATATTACA+AGG - Chr4:52465270-52465289 MsG0480021037.01.T01:intron 20.0%
! ACAGAAACAAACACATAAAT+CGG + Chr4:52464543-52464562 None:intergenic 25.0%
! TAAAATTACCTCAGTGATAT+TGG + Chr4:52464988-52465007 None:intergenic 25.0%
! TGCTAGATAATGTATAGAAT+GGG + Chr4:52466841-52466860 None:intergenic 25.0%
! TGTTTGAATCTTGTAGAAAT+TGG - Chr4:52467197-52467216 MsG0480021037.01.T01:intron 25.0%
! TTGCTAGATAATGTATAGAA+TGG + Chr4:52466842-52466861 None:intergenic 25.0%
! TTTAAATCTAGACTAAAGTG+GGG - Chr4:52465461-52465480 MsG0480021037.01.T01:intron 25.0%
!! ATACTTTTAACATTGAAGCT+GGG - Chr4:52464276-52464295 MsG0480021037.01.T01:CDS 25.0%
!! TAAGATTTTAGATTATCCTG+CGG - Chr4:52467301-52467320 MsG0480021037.01.T01:CDS 25.0%
!!! ATTCACTTATGGATTAGTAA+TGG - Chr4:52465118-52465137 MsG0480021037.01.T01:intron 25.0%
!!! TCATTCTTCTAATTTTTGGT+GGG - Chr4:52466163-52466182 MsG0480021037.01.T01:CDS 25.0%
!!! TTCAATTTTTTGGATAAGCT+TGG - Chr4:52464089-52464108 MsG0480021037.01.T01:intron 25.0%
AAGTCTTAGAATATGGACTT+GGG + Chr4:52466092-52466111 None:intergenic 30.0%
AATGTCTTGTCATAAGTGTA+AGG - Chr4:52465667-52465686 MsG0480021037.01.T01:intron 30.0%
AATGTTGGAAAACAAAGCAA+GGG + Chr4:52464327-52464346 None:intergenic 30.0%
AGAAATGGTATCATGATGAA+GGG - Chr4:52463978-52463997 MsG0480021037.01.T01:intron 30.0%
ATATTACAAGGGATAACACA+AGG - Chr4:52465282-52465301 MsG0480021037.01.T01:intron 30.0%
ATGTCTTGTCATAAGTGTAA+GGG - Chr4:52465668-52465687 MsG0480021037.01.T01:intron 30.0%
ATTCTAACCAAAAATGGAAG+TGG + Chr4:52465442-52465461 None:intergenic 30.0%
ATTCTAGTCCAATGTATCTT+AGG + Chr4:52466189-52466208 None:intergenic 30.0%
CACCAAAAATTAGAAGAATG+AGG + Chr4:52466164-52466183 None:intergenic 30.0%
CATCAAACAGGACTAAATTT+AGG + Chr4:52466137-52466156 None:intergenic 30.0%
CTATAGGTTACTCTCAAAAT+TGG - Chr4:52467257-52467276 MsG0480021037.01.T01:intron 30.0%
CTCAAAATCTTTCTCCAAAT+CGG + Chr4:52467112-52467131 None:intergenic 30.0%
GAAACTGAGTCAAAGTTAAT+TGG + Chr4:52466575-52466594 None:intergenic 30.0%
GATTGAATAGATCTCTTTAC+TGG - Chr4:52464630-52464649 MsG0480021037.01.T01:CDS 30.0%
GCTTATTAGAGTTTATCTAC+TGG - Chr4:52465733-52465752 MsG0480021037.01.T01:intron 30.0%
GGACTATTACATTTGAACAT+AGG - Chr4:52464597-52464616 MsG0480021037.01.T01:CDS 30.0%
GGATATCTCCATAAAAAATG+AGG + Chr4:52465524-52465543 None:intergenic 30.0%
GGATGATCTTGCATTTAAAA+TGG - Chr4:52464808-52464827 MsG0480021037.01.T01:intron 30.0%
GTACATCTTATGATTGTCAA+TGG - Chr4:52466791-52466810 MsG0480021037.01.T01:CDS 30.0%
TAGATAATGTATAGAATGGG+AGG + Chr4:52466838-52466857 None:intergenic 30.0%
TAGTTGTTTGCAGAAGATTA+GGG - Chr4:52463946-52463965 MsG0480021037.01.T01:CDS 30.0%
TCTAATAAGAGAACCATAGT+TGG - Chr4:52465404-52465423 MsG0480021037.01.T01:intron 30.0%
TGAGATTAAGCTTAAAGAGT+TGG - Chr4:52464393-52464412 MsG0480021037.01.T01:intron 30.0%
TTAAATCTAGACTAAAGTGG+GGG - Chr4:52465462-52465481 MsG0480021037.01.T01:intron 30.0%
TTACTCTCAAAATTGGTGTA+GGG - Chr4:52467264-52467283 MsG0480021037.01.T01:intron 30.0%
! AATGTTTTCACAAGCTATCT+TGG + Chr4:52465848-52465867 None:intergenic 30.0%
! ACATTAGTTTCTTCTTGACT+TGG - Chr4:52465019-52465038 MsG0480021037.01.T01:intron 30.0%
! AGTTATGATGCTTTTACTCT+TGG - Chr4:52466690-52466709 MsG0480021037.01.T01:intron 30.0%
! CATACTTTTAACATTGAAGC+TGG - Chr4:52464275-52464294 MsG0480021037.01.T01:CDS 30.0%
! GGTTGTTGTTGTTAACAATT+TGG + Chr4:52466297-52466316 None:intergenic 30.0%
! GTTATGATGCTTTTACTCTT+GGG - Chr4:52466691-52466710 MsG0480021037.01.T01:intron 30.0%
! GTTGTTGTTAACAATTTGGA+GGG + Chr4:52466293-52466312 None:intergenic 30.0%
! TATCACTGAGGTAATTTTAC+TGG - Chr4:52464989-52465008 MsG0480021037.01.T01:intron 30.0%
! TCAATGTTAAAAGTATGACC+CGG + Chr4:52464272-52464291 None:intergenic 30.0%
! TGCCTCATTCTTCTAATTTT+TGG - Chr4:52466159-52466178 MsG0480021037.01.T01:CDS 30.0%
! TGTTGTTGTTAACAATTTGG+AGG + Chr4:52466294-52466313 None:intergenic 30.0%
! TTACTGTAACTTTAAGGACA+CGG - Chr4:52466412-52466431 MsG0480021037.01.T01:intron 30.0%
! TTATGATGCTTTTACTCTTG+GGG - Chr4:52466692-52466711 MsG0480021037.01.T01:intron 30.0%
!! AGAGTAAAAGCATCATAACT+TGG + Chr4:52466690-52466709 None:intergenic 30.0%
!! CTCATTCTTCTAATTTTTGG+TGG - Chr4:52466162-52466181 MsG0480021037.01.T01:CDS 30.0%
!! GGATTTTGAAAATATTTGGG+AGG + Chr4:52465551-52465570 None:intergenic 30.0%
!! TGTTTTCCTACATTGACTAA+GGG - Chr4:52465697-52465716 MsG0480021037.01.T01:intron 30.0%
!! TTGTCTCAGGTTGTTAATTT+TGG - Chr4:52464006-52464025 MsG0480021037.01.T01:intron 30.0%
!! TTGTTTTCCTACATTGACTA+AGG - Chr4:52465696-52465715 MsG0480021037.01.T01:intron 30.0%
!!! CTTTGTTTTCCAACATTGAA+GGG - Chr4:52464330-52464349 MsG0480021037.01.T01:CDS 30.0%
!!! GGTTTAAGCCTCATTTTTTA+TGG - Chr4:52465513-52465532 MsG0480021037.01.T01:intron 30.0%
!!! GTTGCAGATTTTTTTTCACA+TGG - Chr4:52465611-52465630 MsG0480021037.01.T01:intron 30.0%
AAACTCATCCTCATCTACTT+TGG + Chr4:52466250-52466269 None:intergenic 35.0%
AAATGGGGAAAAAGACTCAA+TGG + Chr4:52464706-52464725 None:intergenic 35.0%
AATGTGCTTGTTTGTGTGTT+TGG - Chr4:52464184-52464203 MsG0480021037.01.T01:intron 35.0%
ACACAATCATTATTACCTCG+AGG + Chr4:52466773-52466792 None:intergenic 35.0%
ACAGAAGTCTATAGGAGAAT+GGG - Chr4:52466994-52467013 MsG0480021037.01.T01:intron 35.0%
ACCAATCATATCTGTTCCAA+TGG - Chr4:52465164-52465183 MsG0480021037.01.T01:intron 35.0%
ACCATTGGAACAGATATGAT+TGG + Chr4:52465168-52465187 None:intergenic 35.0%
AGTCTTAGAATATGGACTTG+GGG + Chr4:52466091-52466110 None:intergenic 35.0%
ATTAGAGTGACATGAATGTG+AGG + Chr4:52466382-52466401 None:intergenic 35.0%
ATTATAGGATGATAGTCACC+TGG + Chr4:52465346-52465365 None:intergenic 35.0%
ATTCTCCTATAGACTTCTGT+CGG + Chr4:52466994-52467013 None:intergenic 35.0%
CAATGTTGGAAAACAAAGCA+AGG + Chr4:52464328-52464347 None:intergenic 35.0%
CAGAAATGGTATCATGATGA+AGG - Chr4:52463977-52463996 MsG0480021037.01.T01:intron 35.0%
CGTCAGAGTAAATTCACTTA+TGG - Chr4:52465107-52465126 MsG0480021037.01.T01:intron 35.0%
CTACAAGATTCAAACACCTA+TGG + Chr4:52467193-52467212 None:intergenic 35.0%
CTAGTTGTTTGCAGAAGATT+AGG - Chr4:52463945-52463964 MsG0480021037.01.T01:CDS 35.0%
CTTGTTTGTGTGTTTGGTTA+TGG - Chr4:52464190-52464209 MsG0480021037.01.T01:intron 35.0%
GAAGTCTTAGAATATGGACT+TGG + Chr4:52466093-52466112 None:intergenic 35.0%
GAGGTACGTATACCTATTAA+AGG - Chr4:52466902-52466921 MsG0480021037.01.T01:CDS 35.0%
GAGTCAAAGTTAATTGGTGA+CGG + Chr4:52466569-52466588 None:intergenic 35.0%
GATAACACAAGGTTTGTGAA+CGG - Chr4:52465293-52465312 MsG0480021037.01.T01:intron 35.0%
GATCATTCCCATCCAAAATA+CGG + Chr4:52464845-52464864 None:intergenic 35.0%
GGAAGAAATATTTCAGCCAT+AGG - Chr4:52467174-52467193 MsG0480021037.01.T01:intron 35.0%
GTTACTCTCAAAATTGGTGT+AGG - Chr4:52467263-52467282 MsG0480021037.01.T01:intron 35.0%
TAAAGAGTTGGAGCAGAAAT+CGG - Chr4:52464405-52464424 MsG0480021037.01.T01:intron 35.0%
TACACGTGTGTACCTTTAAT+AGG + Chr4:52466917-52466936 None:intergenic 35.0%
TACCTAGTGCCGTATATTTA+GGG + Chr4:52466002-52466021 None:intergenic 35.0%
TATCTCTCTATCAAAACTGC+AGG - Chr4:52466500-52466519 MsG0480021037.01.T01:intron 35.0%
TCTAATAAGCCAATCCAAAC+AGG + Chr4:52465723-52465742 None:intergenic 35.0%
TGAAAATATTTGGGAGGTCA+TGG + Chr4:52465545-52465564 None:intergenic 35.0%
TGGTGAATGTTTGTTTGTGT+TGG - Chr4:52464228-52464247 MsG0480021037.01.T01:intron 35.0%
TGTAAAAGCCAATATCACTG+AGG - Chr4:52464977-52464996 MsG0480021037.01.T01:intron 35.0%
TGTCTTGTCATAAGTGTAAG+GGG - Chr4:52465669-52465688 MsG0480021037.01.T01:intron 35.0%
TTAGAGTGACATGAATGTGA+GGG + Chr4:52466381-52466400 None:intergenic 35.0%
TTCAAGAGAACTTCCAAAAC+AGG - Chr4:52464147-52464166 MsG0480021037.01.T01:intron 35.0%
TTGTAACCCCTTACAGAATA+GGG + Chr4:52466720-52466739 None:intergenic 35.0%
TTGTTAACAATTTGGAGGGA+AGG + Chr4:52466289-52466308 None:intergenic 35.0%
TTGTTTGTGAGGTTGTTGAA+GGG - Chr4:52464048-52464067 MsG0480021037.01.T01:intron 35.0%
TTTGAACATAGGAATCTGCA+AGG - Chr4:52464608-52464627 MsG0480021037.01.T01:CDS 35.0%
TTTGCAGAAGATTAGGGATA+GGG - Chr4:52463952-52463971 MsG0480021037.01.T01:CDS 35.0%
! ACAAACATACACACCTGTTT+TGG + Chr4:52464163-52464182 None:intergenic 35.0%
! CTTTAGTTTCTCATCTATGC+AGG - Chr4:52464739-52464758 MsG0480021037.01.T01:intron 35.0%
! GGTGCAATATTTTTCCGATT+TGG - Chr4:52467095-52467114 MsG0480021037.01.T01:intron 35.0%
! TACTGTAACTTTAAGGACAC+GGG - Chr4:52466413-52466432 MsG0480021037.01.T01:intron 35.0%
! TATGATGCTTTTACTCTTGG+GGG - Chr4:52466693-52466712 MsG0480021037.01.T01:intron 35.0%
! TGACAAGACATTTGAAACGT+CGG + Chr4:52465659-52465678 None:intergenic 35.0%
! TTTCTGTTTGATGTTTCTGC+AGG - Chr4:52464556-52464575 MsG0480021037.01.T01:CDS 35.0%
!! AAGCTTGGTAATGTTGTTGA+AGG - Chr4:52464104-52464123 MsG0480021037.01.T01:CDS 35.0%
!! AATTGGTGACGGTTAAAGAA+TGG + Chr4:52466558-52466577 None:intergenic 35.0%
!! AGCTTGGTAATGTTGTTGAA+GGG - Chr4:52464105-52464124 MsG0480021037.01.T01:CDS 35.0%
!! ATTGGTGACGGTTAAAGAAT+GGG + Chr4:52466557-52466576 None:intergenic 35.0%
!! CAGTTTTGATAGAGAGATAG+TGG + Chr4:52466499-52466518 None:intergenic 35.0%
!! CGATTTGGAGAAAGATTTTG+AGG - Chr4:52467110-52467129 MsG0480021037.01.T01:intron 35.0%
!! GCTTACATAAGCTATTTCTG+TGG + Chr4:52465910-52465929 None:intergenic 35.0%
!! TAAGCTATTTCTGTGGCAAA+TGG + Chr4:52465903-52465922 None:intergenic 35.0%
!! TCTTCTTGACTTGGCTATTT+GGG - Chr4:52465028-52465047 MsG0480021037.01.T01:intron 35.0%
!! TTCTTCTTGACTTGGCTATT+TGG - Chr4:52465027-52465046 MsG0480021037.01.T01:intron 35.0%
!!! GCTTTGTTTTCCAACATTGA+AGG - Chr4:52464329-52464348 MsG0480021037.01.T01:CDS 35.0%
AACAAAAGGATGCATCAAGC+AGG - Chr4:52465490-52465509 MsG0480021037.01.T01:intron 40.0%
AAGTGGGGGAAGAAAACAAA+AGG - Chr4:52465476-52465495 MsG0480021037.01.T01:intron 40.0%
AATGGAGGAATTAGTGCAGA+TGG - Chr4:52465203-52465222 MsG0480021037.01.T01:intron 40.0%
ACAAAAGGATGCATCAAGCA+GGG - Chr4:52465491-52465510 MsG0480021037.01.T01:intron 40.0%
AGCGCTATCATGATAAATGC+TGG - Chr4:52465939-52465958 MsG0480021037.01.T01:CDS 40.0%
AGGCAATACTCTTTGACCAT+TGG + Chr4:52465183-52465202 None:intergenic 40.0%
CATCTTTGAACTTCCCAGAT+CGG + Chr4:52466960-52466979 None:intergenic 40.0%
CTAAATATACGGCACTAGGT+AGG - Chr4:52466001-52466020 MsG0480021037.01.T01:CDS 40.0%
CTACCTAGTGCCGTATATTT+AGG + Chr4:52466003-52466022 None:intergenic 40.0%
CTGACGAGAAAAATTCTGCT+CGG + Chr4:52465093-52465112 None:intergenic 40.0%
GAAATCCGACAGAAGTCTAT+AGG - Chr4:52466986-52467005 MsG0480021037.01.T01:intron 40.0%
GACAGAAGTCTATAGGAGAA+TGG - Chr4:52466993-52467012 MsG0480021037.01.T01:intron 40.0%
GCAAACAGGCCCTAAATATA+CGG - Chr4:52465990-52466009 MsG0480021037.01.T01:CDS 40.0%
GGGAAGTTCAAAGATGTCAA+AGG - Chr4:52466964-52466983 MsG0480021037.01.T01:CDS 40.0%
GTCTTGTCATAAGTGTAAGG+GGG - Chr4:52465670-52465689 MsG0480021037.01.T01:intron 40.0%
GTTGACAAAACAGCTTCTTC+CGG - Chr4:52464250-52464269 MsG0480021037.01.T01:CDS 40.0%
GTTGATCATAACTCAGGAAC+AGG - Chr4:52467074-52467093 MsG0480021037.01.T01:intron 40.0%
GTTGTAACCCCTTACAGAAT+AGG + Chr4:52466721-52466740 None:intergenic 40.0%
GTTGTTTGTGAGGTTGTTGA+AGG - Chr4:52464047-52464066 MsG0480021037.01.T01:intron 40.0%
GTTTGCAGAAACAGCTTACT+TGG + Chr4:52465976-52465995 None:intergenic 40.0%
GTTTGCAGAAGATTAGGGAT+AGG - Chr4:52463951-52463970 MsG0480021037.01.T01:CDS 40.0%
TAGAGTGACATGAATGTGAG+GGG + Chr4:52466380-52466399 None:intergenic 40.0%
TAGCAACTTCTTGAATCCTC+AGG - Chr4:52464665-52464684 MsG0480021037.01.T01:CDS 40.0%
TATGCGGTTGATCATAACTC+AGG - Chr4:52467068-52467087 MsG0480021037.01.T01:intron 40.0%
TATTACCTCGAGGATGTTTC+TGG + Chr4:52466763-52466782 None:intergenic 40.0%
TCAAAACTGCAGGTAGATCA+AGG - Chr4:52466510-52466529 MsG0480021037.01.T01:intron 40.0%
TCAAATGTAATAGTCCCTCC+TGG + Chr4:52464593-52464612 None:intergenic 40.0%
TCTGCACTAATTCCTCCATT+AGG + Chr4:52465203-52465222 None:intergenic 40.0%
TCTGTAAGGGGTTACAACAT+GGG - Chr4:52466723-52466742 MsG0480021037.01.T01:intron 40.0%
TCTTGTCATAAGTGTAAGGG+GGG - Chr4:52465671-52465690 MsG0480021037.01.T01:intron 40.0%
TGGAAGTTCTCTTGAACAAC+AGG + Chr4:52464143-52464162 None:intergenic 40.0%
TGGCTGAAATATTTCTTCCG+CGG + Chr4:52467173-52467192 None:intergenic 40.0%
TGTGCTTTATGTACTGCTGT+AGG - Chr4:52464787-52464806 MsG0480021037.01.T01:intron 40.0%
TGTTTGTGAGGTTGTTGAAG+GGG - Chr4:52464049-52464068 MsG0480021037.01.T01:intron 40.0%
TTAGGGATAGGGTTCAGAAA+TGG - Chr4:52463963-52463982 MsG0480021037.01.T01:CDS 40.0%
TTCTGTAAGGGGTTACAACA+TGG - Chr4:52466722-52466741 MsG0480021037.01.T01:intron 40.0%
TTGACAAAACAGCTTCTTCC+GGG - Chr4:52464251-52464270 MsG0480021037.01.T01:CDS 40.0%
TTTAGTGAGAGCGGAATATG+CGG - Chr4:52467052-52467071 MsG0480021037.01.T01:intron 40.0%
TTTCTCATCTATGCAGGCAT+AGG - Chr4:52464745-52464764 MsG0480021037.01.T01:intron 40.0%
TTTGTGAACGGAGCTATAGT+TGG - Chr4:52465305-52465324 MsG0480021037.01.T01:intron 40.0%
! GAATACTGGACTCAGCTTTT+CGG + Chr4:52464905-52464924 None:intergenic 40.0%
! GAATGAGGCATTCATCAAAC+AGG + Chr4:52466149-52466168 None:intergenic 40.0%
! GAGTATGCACATCCGTATTT+TGG - Chr4:52464830-52464849 MsG0480021037.01.T01:intron 40.0%
!! AGGCATAGGCATTGATGATT+TGG - Chr4:52464759-52464778 MsG0480021037.01.T01:intron 40.0%
!! AGTAAGCTGTTTCTGCAAAC+AGG - Chr4:52465976-52465995 MsG0480021037.01.T01:CDS 40.0%
!! ATGCACATCCGTATTTTGGA+TGG - Chr4:52464834-52464853 MsG0480021037.01.T01:intron 40.0%
!! CAAAGAGTATTGCCTAATGG+AGG - Chr4:52465188-52465207 MsG0480021037.01.T01:intron 40.0%
!! GGTCAAAGAGTATTGCCTAA+TGG - Chr4:52465185-52465204 MsG0480021037.01.T01:intron 40.0%
!! TGCACATCCGTATTTTGGAT+GGG - Chr4:52464835-52464854 MsG0480021037.01.T01:intron 40.0%
!! TGGTACTGGTATCGATAAGA+TGG - Chr4:52465244-52465263 MsG0480021037.01.T01:intron 40.0%
!!! TACTGGGGTTGGTTTTCTAT+AGG - Chr4:52467241-52467260 MsG0480021037.01.T01:intron 40.0%
!!! TATTGGCTTTTACACCAGCA+CGG + Chr4:52464971-52464990 None:intergenic 40.0%
!!! TGTTTGGTTCTTTTCTACCG+CGG - Chr4:52467153-52467172 MsG0480021037.01.T01:intron 40.0%
AACAGGCCCTTAGTCAATGT+AGG + Chr4:52465706-52465725 None:intergenic 45.0%
AAGCTGAGTCCAGTATTCAC+TGG - Chr4:52464907-52464926 MsG0480021037.01.T01:intron 45.0%
AAGCTGGGAAACAAGCTTTG+AGG - Chr4:52464291-52464310 MsG0480021037.01.T01:CDS 45.0%
ATCGATACCAGTACCACTGA+GGG + Chr4:52465240-52465259 None:intergenic 45.0%
CAAAAGGATGCATCAAGCAG+GGG - Chr4:52465492-52465511 MsG0480021037.01.T01:intron 45.0%
CGAGAGTCGTAGTGTATGTT+TGG - Chr4:52467137-52467156 MsG0480021037.01.T01:intron 45.0%
CTTCATACCAGCACCATAAG+AGG + Chr4:52467027-52467046 None:intergenic 45.0%
CTTCCCTCATTCTTCTCATC+AGG + Chr4:52464365-52464384 None:intergenic 45.0%
GAAGCTTGGTTTAGTGAGAG+CGG - Chr4:52467043-52467062 MsG0480021037.01.T01:intron 45.0%
GCGTCCAACTTTGGTATTTG+CGG - Chr4:52464472-52464491 MsG0480021037.01.T01:intron 45.0%
GGTTACAACATGGGTGAGAT+TGG - Chr4:52466732-52466751 MsG0480021037.01.T01:intron 45.0%
GTGCAAGCATCTACCAACTA+TGG + Chr4:52465420-52465439 None:intergenic 45.0%
GTGTATGCCTTTGCAGAACA+TGG - Chr4:52466932-52466951 MsG0480021037.01.T01:CDS 45.0%
GTTTCTCCAGTTGAAGTCTG+TGG - Chr4:52466590-52466609 MsG0480021037.01.T01:intron 45.0%
GTTTGCAGCCAAAGTAGATG+AGG - Chr4:52466239-52466258 MsG0480021037.01.T01:intron 45.0%
GTTTGTGAGGTTGTTGAAGG+GGG - Chr4:52464050-52464069 MsG0480021037.01.T01:intron 45.0%
TATCGATACCAGTACCACTG+AGG + Chr4:52465241-52465260 None:intergenic 45.0%
TGAGTCCAGTATTCACTGGT+GGG - Chr4:52464911-52464930 MsG0480021037.01.T01:intron 45.0%
TTCGCCGCAAATACCAAAGT+TGG + Chr4:52464479-52464498 None:intergenic 45.0%
TTTCCTGTTCTTCCTACAGC+TGG - Chr4:52466874-52466893 MsG0480021037.01.T01:CDS 45.0%
! AACCAAGCCTTATCCCTAAG+TGG - Chr4:52466323-52466342 MsG0480021037.01.T01:intron 45.0%
! ACATTGACTAAGGGCCTGTT+TGG - Chr4:52465706-52465725 MsG0480021037.01.T01:intron 45.0%
! ACCAAGCCTTATCCCTAAGT+GGG - Chr4:52466324-52466343 MsG0480021037.01.T01:intron 45.0%
! ATGAAGGGTATGCTTGTCTC+AGG - Chr4:52463993-52464012 MsG0480021037.01.T01:intron 45.0%
! ATTTGAAACGTCGGCTGATG+CGG + Chr4:52465650-52465669 None:intergenic 45.0%
! GACTAGTATCAGAGTACCTG+AGG + Chr4:52464684-52464703 None:intergenic 45.0%
! GCTTGCACCACTTCCATTTT+TGG - Chr4:52465432-52465451 MsG0480021037.01.T01:intron 45.0%
! GGACTGAAGTTAGTACTGAG+TGG - Chr4:52464426-52464445 MsG0480021037.01.T01:intron 45.0%
! GGATAAGGCTTGGTTGTTGT+TGG + Chr4:52466318-52466337 None:intergenic 45.0%
! TTGGCAATCTAAAACACGCG+AGG - Chr4:52464025-52464044 MsG0480021037.01.T01:intron 45.0%
! TTGGTGGGCCTAAGATACAT+TGG - Chr4:52466178-52466197 MsG0480021037.01.T01:CDS 45.0%
!! ACTGAGTGGAGTATTGTTCC+TGG - Chr4:52464440-52464459 MsG0480021037.01.T01:intron 45.0%
!! CTGAGTGGAGTATTGTTCCT+GGG - Chr4:52464441-52464460 MsG0480021037.01.T01:intron 45.0%
!! TATGGTGCTGGTATGAAGCT+TGG - Chr4:52467029-52467048 MsG0480021037.01.T01:intron 45.0%
!!! AATAAAATGTTTTTTTTTAT+AGG + Chr4:52465877-52465896 None:intergenic 5.0%
AACACGCGAGGTTGTTTGTG+AGG - Chr4:52464037-52464056 MsG0480021037.01.T01:intron 50.0%
AACCACCATAGTGACCATGG+AGG + Chr4:52466653-52466672 None:intergenic 50.0%
ACGGAGCTATAGTTGGAAGC+AGG - Chr4:52465312-52465331 MsG0480021037.01.T01:intron 50.0%
ACGGTCAACCCACATATGGA+GGG + Chr4:52464952-52464971 None:intergenic 50.0%
AGCAGCTTACACGGAGAGTT+CGG + Chr4:52464875-52464894 None:intergenic 50.0%
AGTCTATAGGAGAATGGGCC+AGG - Chr4:52466999-52467018 MsG0480021037.01.T01:intron 50.0%
AGTGACATGAATGTGAGGGG+AGG + Chr4:52466377-52466396 None:intergenic 50.0%
CACAACCACCATAGTGACCA+TGG + Chr4:52466656-52466675 None:intergenic 50.0%
CAGAACCAGCTTATCAGCTC+GGG + Chr4:52466053-52466072 None:intergenic 50.0%
CAGTTGAAGTCTGTGGAGGA+AGG - Chr4:52466597-52466616 MsG0480021037.01.T01:CDS 50.0%
CCAACATTGAAGGGAATCCG+CGG - Chr4:52464339-52464358 MsG0480021037.01.T01:CDS 50.0%
CGGCCTGATGAGAAGAATGA+GGG - Chr4:52464359-52464378 MsG0480021037.01.T01:intron 50.0%
CTGAGTCCAGTATTCACTGG+TGG - Chr4:52464910-52464929 MsG0480021037.01.T01:intron 50.0%
CTTCCTCCACAGACTTCAAC+TGG + Chr4:52466599-52466618 None:intergenic 50.0%
CTTGTCCTCCATGGTCACTA+TGG - Chr4:52466645-52466664 MsG0480021037.01.T01:CDS 50.0%
GACTAAGGGCCTGTTTGGAT+TGG - Chr4:52465711-52465730 MsG0480021037.01.T01:intron 50.0%
GCAGAACCAGCTTATCAGCT+CGG + Chr4:52466054-52466073 None:intergenic 50.0%
GCTGATGCGGTGGAATAACA+GGG + Chr4:52465637-52465656 None:intergenic 50.0%
GGAAATTGCTGCCAACACCA+AGG + Chr4:52466536-52466555 None:intergenic 50.0%
GGCCCTAAATATACGGCACT+AGG - Chr4:52465997-52466016 MsG0480021037.01.T01:CDS 50.0%
GGCTGTTGAAGCAGCTTACA+CGG + Chr4:52464884-52464903 None:intergenic 50.0%
GGTCACTATGGTGGTTGTGT+AGG - Chr4:52466657-52466676 MsG0480021037.01.T01:intron 50.0%
GTCTATAGGAGAATGGGCCA+GGG - Chr4:52467000-52467019 MsG0480021037.01.T01:intron 50.0%
TCATTCTTCTCATCAGGCCG+CGG + Chr4:52464359-52464378 None:intergenic 50.0%
TCTCCAGTTGAAGTCTGTGG+AGG - Chr4:52466593-52466612 MsG0480021037.01.T01:intron 50.0%
TGGAAGCAGGAACATGTTCC+AGG - Chr4:52465325-52465344 MsG0480021037.01.T01:intron 50.0%
TGGAGGGAAGGCAACTAGAA+GGG + Chr4:52466277-52466296 None:intergenic 50.0%
TGGATGAGCCCTCCATATGT+GGG - Chr4:52464941-52464960 MsG0480021037.01.T01:intron 50.0%
TGGGGGTCCCTATTCTGTAA+GGG - Chr4:52466710-52466729 MsG0480021037.01.T01:intron 50.0%
TGTTTAGCCGACCCCACTTA+GGG + Chr4:52466339-52466358 None:intergenic 50.0%
TTGGAGGGAAGGCAACTAGA+AGG + Chr4:52466278-52466297 None:intergenic 50.0%
TTGGGGGTCCCTATTCTGTA+AGG - Chr4:52466709-52466728 MsG0480021037.01.T01:intron 50.0%
TTGTTTAGCCGACCCCACTT+AGG + Chr4:52466340-52466359 None:intergenic 50.0%
! CCAAGCCTTATCCCTAAGTG+GGG - Chr4:52466325-52466344 MsG0480021037.01.T01:intron 50.0%
! GTAGATCAAGGCCTTGGTGT+TGG - Chr4:52466522-52466541 MsG0480021037.01.T01:intron 50.0%
!! AGCTGATAAGCTGGTTCTGC+GGG - Chr4:52466054-52466073 MsG0480021037.01.T01:CDS 50.0%
!! ATCGGTGCCATGTTCTGCAA+AGG + Chr4:52466942-52466961 None:intergenic 50.0%
!! GAGCTGATAAGCTGGTTCTG+CGG - Chr4:52466053-52466072 MsG0480021037.01.T01:CDS 50.0%
AAACCAACCCCAGTAGCAGC+AGG + Chr4:52467236-52467255 None:intergenic 55.0%
AACCAACCCCAGTAGCAGCA+GGG + Chr4:52467235-52467254 None:intergenic 55.0%
AATGGGCCAGGGTCCTCTTA+TGG - Chr4:52467011-52467030 MsG0480021037.01.T01:intron 55.0%
AGCAGCCAGAAACATCCTCG+AGG - Chr4:52466755-52466774 MsG0480021037.01.T01:intron 55.0%
AGTATTGTTCCTGGGCGAGG+AGG - Chr4:52464449-52464468 MsG0480021037.01.T01:intron 55.0%
AGTGAACTCCCTGCTGCTAC+TGG - Chr4:52467224-52467243 MsG0480021037.01.T01:intron 55.0%
CACGGTCAACCCACATATGG+AGG + Chr4:52464953-52464972 None:intergenic 55.0%
CAGCACGGTCAACCCACATA+TGG + Chr4:52464956-52464975 None:intergenic 55.0%
CCAACAACCCTCAGTGGTAC+TGG - Chr4:52465230-52465249 MsG0480021037.01.T01:intron 55.0%
CCAGTACCACTGAGGGTTGT+TGG + Chr4:52465233-52465252 None:intergenic 55.0%
CCCCACTTAGGGATAAGGCT+TGG + Chr4:52466328-52466347 None:intergenic 55.0%
CCGCGGATTCCCTTCAATGT+TGG + Chr4:52464342-52464361 None:intergenic 55.0%
CTGCAGGTAGATCAAGGCCT+TGG - Chr4:52466516-52466535 MsG0480021037.01.T01:intron 55.0%
CTGCCAGCTGTAGGAAGAAC+AGG + Chr4:52466880-52466899 None:intergenic 55.0%
GCCTTATCCCTAAGTGGGGT+CGG - Chr4:52466329-52466348 MsG0480021037.01.T01:intron 55.0%
GCGGCCTGATGAGAAGAATG+AGG - Chr4:52464358-52464377 MsG0480021037.01.T01:intron 55.0%
GGCTGATGCGGTGGAATAAC+AGG + Chr4:52465638-52465657 None:intergenic 55.0%
GGGGGTCCCTATTCTGTAAG+GGG - Chr4:52466711-52466730 MsG0480021037.01.T01:intron 55.0%
GTACCACTGAGGGTTGTTGG+AGG + Chr4:52465230-52465249 None:intergenic 55.0%
GTATTGTTCCTGGGCGAGGA+GGG - Chr4:52464450-52464469 MsG0480021037.01.T01:intron 55.0%
GTCCTCCATGGTCACTATGG+TGG - Chr4:52466648-52466667 MsG0480021037.01.T01:CDS 55.0%
GTGAACTCCCTGCTGCTACT+GGG - Chr4:52467225-52467244 MsG0480021037.01.T01:intron 55.0%
GTGGATGAGCCCTCCATATG+TGG - Chr4:52464940-52464959 MsG0480021037.01.T01:intron 55.0%
TCAGTCCCGAGCTGATAAGC+TGG - Chr4:52466045-52466064 MsG0480021037.01.T01:CDS 55.0%
TGAACTCCCTGCTGCTACTG+GGG - Chr4:52467226-52467245 MsG0480021037.01.T01:intron 55.0%
TGACCATGGAGGACAAGCAC+TGG + Chr4:52466642-52466661 None:intergenic 55.0%
! AAGTCTGTGGAGGAAGGTGC+TGG - Chr4:52466603-52466622 MsG0480021037.01.T01:CDS 55.0%
! CATATGTGGGTTGACCGTGC+TGG - Chr4:52464954-52464973 MsG0480021037.01.T01:intron 55.0%
! TCCAGTATTCACTGGTGGGC+CGG - Chr4:52464915-52464934 MsG0480021037.01.T01:intron 55.0%
!! GCAGAACATGGCACCGATCT+GGG - Chr4:52466944-52466963 MsG0480021037.01.T01:CDS 55.0%
!! GCTGATAAGCTGGTTCTGCG+GGG - Chr4:52466055-52466074 MsG0480021037.01.T01:CDS 55.0%
!! TGCAGAACATGGCACCGATC+TGG - Chr4:52466943-52466962 MsG0480021037.01.T01:CDS 55.0%
!! TGGAGTATTGTTCCTGGGCG+AGG - Chr4:52464446-52464465 MsG0480021037.01.T01:intron 55.0%
ACACGGAGAGTTCGGTTGCG+TGG + Chr4:52464867-52464886 None:intergenic 60.0%
AGGCTTCGCTTCAGCCAGGA+GGG - Chr4:52464576-52464595 MsG0480021037.01.T01:CDS 60.0%
CCACCAGTGCTTGTCCTCCA+TGG - Chr4:52466636-52466655 MsG0480021037.01.T01:CDS 60.0%
CCAGCACCATAAGAGGACCC+TGG + Chr4:52467020-52467039 None:intergenic 60.0%
CCAGGGTCCTCTTATGGTGC+TGG - Chr4:52467017-52467036 MsG0480021037.01.T01:intron 60.0%
CTTCCTACAGCTGGCAGCTG+AGG - Chr4:52466883-52466902 MsG0480021037.01.T01:CDS 60.0%
GCCGACCCCACTTAGGGATA+AGG + Chr4:52466333-52466352 None:intergenic 60.0%
GGACCTCCAACAACCCTCAG+TGG - Chr4:52465224-52465243 MsG0480021037.01.T01:intron 60.0%
GTACCTCAGCTGCCAGCTGT+AGG + Chr4:52466889-52466908 None:intergenic 60.0%
! AGTATTCACTGGTGGGCCGG+GGG - Chr4:52464918-52464937 MsG0480021037.01.T01:intron 60.0%
! CAGTATTCACTGGTGGGCCG+GGG - Chr4:52464917-52464936 MsG0480021037.01.T01:intron 60.0%
! CCAGTATTCACTGGTGGGCC+GGG - Chr4:52464916-52464935 MsG0480021037.01.T01:intron 60.0%
! TGAAACGTCGGCTGATGCGG+TGG + Chr4:52465647-52465666 None:intergenic 60.0%
!! AGGACAAGCACTGGTGGTGG+TGG + Chr4:52466633-52466652 None:intergenic 60.0%
!! CCATGGAGGACAAGCACTGG+TGG + Chr4:52466639-52466658 None:intergenic 60.0%
!! TGGAGGACAAGCACTGGTGG+TGG + Chr4:52466636-52466655 None:intergenic 60.0%
ATGGAGGGCTCATCCACCCC+CGG + Chr4:52464937-52464956 None:intergenic 65.0%
CAGGCTTCGCTTCAGCCAGG+AGG - Chr4:52464575-52464594 MsG0480021037.01.T01:CDS 65.0%
CCCGGCCCACCAGTGAATAC+TGG + Chr4:52464919-52464938 None:intergenic 65.0%
CTCCCTGCTGCTACTGGGGT+TGG - Chr4:52467230-52467249 MsG0480021037.01.T01:intron 65.0%
CTGCAGGCTTCGCTTCAGCC+AGG - Chr4:52464572-52464591 MsG0480021037.01.T01:CDS 65.0%
!! GCGAGGAGGGCGTCCAACTT+TGG - Chr4:52464463-52464482 MsG0480021037.01.T01:intron 65.0%
! ATTCACTGGTGGGCCGGGGG+TGG - Chr4:52464921-52464940 MsG0480021037.01.T01:intron 70.0%
GTTGGACGCCCTCCTCGCCC+AGG + Chr4:52464461-52464480 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr4 gene 52463917 52467334 52463917 ID=MsG0480021037.01;Name=MsG0480021037.01
Chr4 mRNA 52463917 52467334 52463917 ID=MsG0480021037.01.T01;Parent=MsG0480021037.01;Name=MsG0480021037.01.T01;_AED=0.49;_eAED=0.51;_QI=0|0.37|0.22|1|0.87|0.88|9|0|412
Chr4 exon 52467278 52467334 52467278 ID=MsG0480021037.01.T01:exon:840;Parent=MsG0480021037.01.T01
Chr4 exon 52466767 52466988 52466767 ID=MsG0480021037.01.T01:exon:839;Parent=MsG0480021037.01.T01
Chr4 exon 52466595 52466673 52466595 ID=MsG0480021037.01.T01:exon:838;Parent=MsG0480021037.01.T01
Chr4 exon 52466447 52466490 52466447 ID=MsG0480021037.01.T01:exon:837;Parent=MsG0480021037.01.T01
Chr4 exon 52465905 52466225 52465905 ID=MsG0480021037.01.T01:exon:836;Parent=MsG0480021037.01.T01
Chr4 exon 52464475 52464729 52464475 ID=MsG0480021037.01.T01:exon:835;Parent=MsG0480021037.01.T01
Chr4 exon 52464230 52464358 52464230 ID=MsG0480021037.01.T01:exon:834;Parent=MsG0480021037.01.T01
Chr4 exon 52464102 52464161 52464102 ID=MsG0480021037.01.T01:exon:833;Parent=MsG0480021037.01.T01
Chr4 exon 52463917 52463988 52463917 ID=MsG0480021037.01.T01:exon:832;Parent=MsG0480021037.01.T01
Chr4 CDS 52467278 52467334 52467278 ID=MsG0480021037.01.T01:cds;Parent=MsG0480021037.01.T01
Chr4 CDS 52466767 52466988 52466767 ID=MsG0480021037.01.T01:cds;Parent=MsG0480021037.01.T01
Chr4 CDS 52466595 52466673 52466595 ID=MsG0480021037.01.T01:cds;Parent=MsG0480021037.01.T01
Chr4 CDS 52466447 52466490 52466447 ID=MsG0480021037.01.T01:cds;Parent=MsG0480021037.01.T01
Chr4 CDS 52465905 52466225 52465905 ID=MsG0480021037.01.T01:cds;Parent=MsG0480021037.01.T01
Chr4 CDS 52464475 52464729 52464475 ID=MsG0480021037.01.T01:cds;Parent=MsG0480021037.01.T01
Chr4 CDS 52464230 52464358 52464230 ID=MsG0480021037.01.T01:cds;Parent=MsG0480021037.01.T01
Chr4 CDS 52464102 52464161 52464102 ID=MsG0480021037.01.T01:cds;Parent=MsG0480021037.01.T01
Chr4 CDS 52463917 52463988 52463917 ID=MsG0480021037.01.T01:cds;Parent=MsG0480021037.01.T01
Gene Sequence

>MsG0480021037.01.T01

ATGTTGAGTAAGCAAGGGAGGGTTAGTGCTAGTTGTTTGCAGAAGATTAGGGATAGGCTTCTTCCGGGTCATACTTTTAACATTGAAGCTGGGAAACAAGCTTTGAGGAACATAAACTCCCTTGCTTTGTTTTCCAACATTGAAGGGAATCCGCGGCCTGATGAGAAGAATGAGGGAAGCATAATGTTGAGATTAAGCTTAAAGAGTTGGAGCAGAAATCGGACTGAAGTTAGTACTGAGTGGAGTATTGTTCCTGGGCGAGGAGGGCGTCCAACTTTGGCTTCGCTTCAGCCAGGAGGGACTATTACATTTGAACATAGGAATCTGCAAGGATTGAATAGATCTCTTTACTGGTTCAGCATAGGCATTGATGATTTGGTTAACTGTGCTTTATGTACTGCTTTTCTTCTTGACTTGGCTATTTGGGCTGTTCGTAGCTTTCTTTTTAACTTGCAATTCTTGTTTTCCGAGCAGAATTTTTCTCGTCAGAGTAAATTCACTTATGGATTAGTAATGGAAGAGATAATAACACGTGATGAAACCAATCATATCTGTTCCAATGGTCAAAGAGTATTGCCTAATGGAGGAATTAGTGCAGATGGACCTCCAACAACCCTCAGTGGTACTGGTATCGATAAGATGGCATTTTTACAAGCTAATATTACAAGGGATAACACAAGGTTTGTGAACGGAGCTATAGTTGGAAGCAGGAACATGTTCCAGGTAGATCAAGGCCTTGGTGTTGGCAGCAATTTCCCATTCTTTAACCGTCACCAATTAACTTTGACTCAGTTTCTCCAGTTGAAGTCTGTGGAGGAAGGTGCTGGTAAACCACCACCACCAGTGCTTGTCCTCCATGGTCACTATGGTGGTTGTGTAGGTGATCTTCCAAGTTATGATGCTTTTACTCTTGGGGGTCCCTATTCTGTAAGGGGTTACAACATGGGTGAGATTGGAGCAGCCAGAAACATCCTCGAGCTGGCAGCTGAGGTACGTATACCTATTAAAGGTACACACGTGTATGCCTTTGCAGAACATGGCACCGATCTGGGAAGTTCAAAGATGTCAAAGGAAATCCGACAGAAGTCTATAGGAGAATGGGCCAGGGAACAGGTGCAATATTTTTCCGATTTGGAGAAAGATTTTGAGGTGCACGAGAGTCGTAGTGTTACTCTCAAAATTGGTGTAGGGTTCAATGAAAATATTAAGATTTTAGATTATCCTGCGGTCTACTATTGA

Protein sequence

>MsG0480021037.01.T01

MLSKQGRVSASCLQKIRDRLLPGHTFNIEAGKQALRNINSLALFSNIEGNPRPDEKNEGSIMLRLSLKSWSRNRTEVSTEWSIVPGRGGRPTLASLQPGGTITFEHRNLQGLNRSLYWFSIGIDDLVNCALCTAFLLDLAIWAVRSFLFNLQFLFSEQNFSRQSKFTYGLVMEEIITRDETNHICSNGQRVLPNGGISADGPPTTLSGTGIDKMAFLQANITRDNTRFVNGAIVGSRNMFQVDQGLGVGSNFPFFNRHQLTLTQFLQLKSVEEGAGKPPPPVLVLHGHYGGCVGDLPSYDAFTLGGPYSVRGYNMGEIGAARNILELAAEVRIPIKGTHVYAFAEHGTDLGSSKMSKEIRQKSIGEWAREQVQYFSDLEKDFEVHESRSVTLKIGVGFNENIKILDYPAVYY*