Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780036486.01.T01 | XP_003607297.1 | 97.059 | 68 | 2 | 0 | 1 | 68 | 1 | 68 | 1.49E-40 | 137 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780036486.01.T01 | G7JPM7 | 97.059 | 68 | 2 | 0 | 1 | 68 | 1 | 68 | 7.14e-41 | 137 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080048065.01 | MsG0780036486.01 | 0.839437 | 1.585124e-57 | 2.189073e-54 |
MsG0080048152.01 | MsG0780036486.01 | 0.802246 | 6.144913e-49 | 2.995463e-46 |
MsG0080048727.01 | MsG0780036486.01 | 0.822384 | 2.437713e-53 | 2.037401e-50 |
MsG0080048849.01 | MsG0780036486.01 | 0.857334 | 1.751992e-62 | 4.309052e-59 |
MsG0080048865.01 | MsG0780036486.01 | 0.831042 | 2.088157e-55 | 2.239512e-52 |
MsG0080048878.01 | MsG0780036486.01 | 0.843059 | 1.767901e-58 | 2.732878e-55 |
MsG0080049068.01 | MsG0780036486.01 | 0.834624 | 2.690833e-56 | 3.211071e-53 |
MsG0080049069.01 | MsG0780036486.01 | 0.830714 | 2.513227e-55 | 2.669597e-52 |
MsG0180000038.01 | MsG0780036486.01 | 0.816270 | 6.029777e-52 | 4.253186e-49 |
MsG0180000355.01 | MsG0780036486.01 | 0.839839 | 1.246137e-57 | 1.742228e-54 |
MsG0180000404.01 | MsG0780036486.01 | 0.836618 | 8.422748e-57 | 1.067084e-53 |
MsG0180000782.01 | MsG0780036486.01 | 0.804367 | 2.235362e-49 | 1.150453e-46 |
MsG0180001167.01 | MsG0780036486.01 | 0.810747 | 9.883714e-51 | 6.007280e-48 |
MsG0180001356.01 | MsG0780036486.01 | 0.842461 | 2.549197e-58 | 3.868361e-55 |
MsG0180001610.01 | MsG0780036486.01 | 0.826732 | 2.308101e-54 | 2.182786e-51 |
MsG0180001704.01 | MsG0780036486.01 | 0.821790 | 3.347382e-53 | 2.750520e-50 |
MsG0180002399.01 | MsG0780036486.01 | 0.801656 | 8.124653e-49 | 3.901323e-46 |
MsG0180002700.01 | MsG0780036486.01 | 0.822627 | 2.140786e-53 | 1.801694e-50 |
MsG0180002794.01 | MsG0780036486.01 | 0.802687 | 4.983493e-49 | 2.456728e-46 |
MsG0180003353.01 | MsG0780036486.01 | 0.829973 | 3.814111e-55 | 3.964863e-52 |
MsG0180003651.01 | MsG0780036486.01 | 0.803475 | 3.425449e-49 | 1.722985e-46 |
MsG0180003697.01 | MsG0780036486.01 | 0.847733 | 9.593078e-60 | 1.721308e-56 |
MsG0180003741.01 | MsG0780036486.01 | 0.815072 | 1.114973e-51 | 7.610223e-49 |
MsG0180003767.01 | MsG0780036486.01 | -0.832007 | 1.208140e-55 | 1.333386e-52 |
MsG0180003821.01 | MsG0780036486.01 | 0.823561 | 1.296225e-53 | 1.119954e-50 |
MsG0180003885.01 | MsG0780036486.01 | 0.831143 | 1.973110e-55 | 2.122438e-52 |
MsG0180004046.01 | MsG0780036486.01 | 0.823300 | 1.491827e-53 | 1.279491e-50 |
MsG0180004428.01 | MsG0780036486.01 | 0.800542 | 1.372423e-48 | 6.407198e-46 |
MsG0180004448.01 | MsG0780036486.01 | 0.803543 | 3.315493e-49 | 1.670695e-46 |
MsG0180004466.01 | MsG0780036486.01 | 0.828875 | 7.048451e-55 | 7.094772e-52 |
MsG0180004493.01 | MsG0780036486.01 | 0.846288 | 2.386022e-59 | 4.086625e-56 |
MsG0180004605.01 | MsG0780036486.01 | -0.828156 | 1.051429e-54 | 1.036573e-51 |
MsG0180004750.01 | MsG0780036486.01 | 0.843682 | 1.205670e-58 | 1.901024e-55 |
MsG0180004765.01 | MsG0780036486.01 | 0.806947 | 6.421142e-50 | 3.531120e-47 |
MsG0180005113.01 | MsG0780036486.01 | 0.809682 | 1.677285e-50 | 9.912127e-48 |
MsG0180005153.01 | MsG0780036486.01 | 0.842346 | 2.734866e-58 | 4.134890e-55 |
MsG0180005169.01 | MsG0780036486.01 | 0.838161 | 3.390200e-57 | 4.502118e-54 |
MsG0180005303.01 | MsG0780036486.01 | -0.813529 | 2.444616e-51 | 1.600454e-48 |
MsG0180005964.01 | MsG0780036486.01 | 0.821904 | 3.150477e-53 | 2.597140e-50 |
MsG0180006017.01 | MsG0780036486.01 | 0.817457 | 3.265117e-52 | 2.379209e-49 |
MsG0180006031.01 | MsG0780036486.01 | 0.842999 | 1.834100e-58 | 2.829734e-55 |
MsG0180006096.01 | MsG0780036486.01 | 0.864016 | 1.646590e-64 | 5.093495e-61 |
MsG0280006306.01 | MsG0780036486.01 | -0.828013 | 1.138082e-54 | 1.117370e-51 |
MsG0280010776.01 | MsG0780036486.01 | 0.804255 | 2.358896e-49 | 1.210477e-46 |
MsG0280011255.01 | MsG0780036486.01 | 0.817069 | 3.991813e-52 | 2.877878e-49 |
MsG0280011304.01 | MsG0780036486.01 | 0.863072 | 3.230126e-64 | 9.669050e-61 |
MsG0380011844.01 | MsG0780036486.01 | 0.837977 | 3.780679e-57 | 4.993491e-54 |
MsG0380012005.01 | MsG0780036486.01 | 0.805954 | 1.039997e-49 | 5.575761e-47 |
MsG0380012011.01 | MsG0780036486.01 | 0.801463 | 8.896579e-49 | 4.251364e-46 |
MsG0380012122.01 | MsG0780036486.01 | 0.861019 | 1.376424e-63 | 3.838235e-60 |
MsG0380012374.01 | MsG0780036486.01 | 0.811805 | 5.826562e-51 | 3.641718e-48 |
MsG0380012570.01 | MsG0780036486.01 | 0.803775 | 2.968288e-49 | 1.504579e-46 |
MsG0380013085.01 | MsG0780036486.01 | 0.801738 | 7.816479e-49 | 3.761056e-46 |
MsG0680030992.01 | MsG0780036486.01 | 0.814443 | 1.536400e-51 | 1.031080e-48 |
MsG0680031010.01 | MsG0780036486.01 | 0.812193 | 4.794201e-51 | 3.028298e-48 |
MsG0680031939.01 | MsG0780036486.01 | 0.872682 | 2.635714e-67 | 1.113021e-63 |
MsG0680032830.01 | MsG0780036486.01 | 0.802654 | 5.063619e-49 | 2.494010e-46 |
MsG0680033377.01 | MsG0780036486.01 | 0.838052 | 3.615071e-57 | 4.785505e-54 |
MsG0680035498.01 | MsG0780036486.01 | 0.808947 | 2.411496e-50 | 1.397327e-47 |
MsG0480018584.01 | MsG0780036486.01 | 0.818678 | 1.729137e-52 | 1.302896e-49 |
MsG0480018644.01 | MsG0780036486.01 | 0.814184 | 1.753158e-51 | 1.168290e-48 |
MsG0480018850.01 | MsG0780036486.01 | 0.836937 | 6.980960e-57 | 8.930908e-54 |
MsG0480018911.01 | MsG0780036486.01 | 0.863416 | 2.528171e-64 | 7.657576e-61 |
MsG0480020024.01 | MsG0780036486.01 | 0.828286 | 9.781804e-55 | 9.679566e-52 |
MsG0480020025.01 | MsG0780036486.01 | 0.819921 | 9.011444e-53 | 7.028989e-50 |
MsG0480020690.01 | MsG0780036486.01 | 0.821951 | 3.072927e-53 | 2.536474e-50 |
MsG0480020788.01 | MsG0780036486.01 | 0.824154 | 9.410735e-54 | 8.268531e-51 |
MsG0480021037.01 | MsG0780036486.01 | 0.819904 | 9.089052e-53 | 7.086101e-50 |
MsG0480021248.01 | MsG0780036486.01 | 0.817195 | 3.740030e-52 | 2.705529e-49 |
MsG0480021768.01 | MsG0780036486.01 | 0.872802 | 2.403563e-67 | 1.019147e-63 |
MsG0480021776.01 | MsG0780036486.01 | -0.813098 | 3.040040e-51 | 1.966820e-48 |
MsG0480022491.01 | MsG0780036486.01 | -0.816476 | 5.422057e-52 | 3.845907e-49 |
MsG0480023073.01 | MsG0780036486.01 | 0.830923 | 2.233784e-55 | 2.387439e-52 |
MsG0480023162.01 | MsG0780036486.01 | 0.834050 | 3.749585e-56 | 4.398158e-53 |
MsG0480023221.01 | MsG0780036486.01 | 0.813271 | 2.785648e-51 | 1.810804e-48 |
MsG0480023384.01 | MsG0780036486.01 | 0.807078 | 6.024171e-50 | 3.324007e-47 |
MsG0480023652.01 | MsG0780036486.01 | 0.823040 | 1.715317e-53 | 1.460574e-50 |
MsG0480023660.01 | MsG0780036486.01 | 0.801712 | 7.910978e-49 | 3.804165e-46 |
MsG0480024030.01 | MsG0780036486.01 | 0.839976 | 1.147655e-57 | 1.611720e-54 |
MsG0580024161.01 | MsG0780036486.01 | 0.835025 | 2.133756e-56 | 2.576941e-53 |
MsG0580024790.01 | MsG0780036486.01 | -0.830064 | 3.624599e-55 | 3.777554e-52 |
MsG0580025366.01 | MsG0780036486.01 | 0.820393 | 7.025287e-53 | 5.552197e-50 |
MsG0580025369.01 | MsG0780036486.01 | -0.830732 | 2.488677e-55 | 2.644846e-52 |
MsG0580025407.01 | MsG0780036486.01 | -0.816504 | 5.344043e-52 | 3.793393e-49 |
MsG0580025467.01 | MsG0780036486.01 | 0.809679 | 1.679530e-50 | 9.924685e-48 |
MsG0580025561.01 | MsG0780036486.01 | -0.808662 | 2.774367e-50 | 1.595529e-47 |
MsG0580025627.01 | MsG0780036486.01 | 0.828235 | 1.006459e-54 | 9.944646e-52 |
MsG0580025971.01 | MsG0780036486.01 | 0.818648 | 1.756726e-52 | 1.322544e-49 |
MsG0380015066.01 | MsG0780036486.01 | -0.812345 | 4.441421e-51 | 2.817044e-48 |
MsG0380015352.01 | MsG0780036486.01 | 0.802945 | 4.409284e-49 | 2.187889e-46 |
MsG0380015366.01 | MsG0780036486.01 | 0.818774 | 1.644250e-52 | 1.242306e-49 |
MsG0380015372.01 | MsG0780036486.01 | 0.808179 | 3.517649e-50 | 1.997733e-47 |
MsG0380015435.01 | MsG0780036486.01 | 0.808219 | 3.449029e-50 | 1.960803e-47 |
MsG0380015466.01 | MsG0780036486.01 | 0.807058 | 6.083408e-50 | 3.355040e-47 |
MsG0380015533.01 | MsG0780036486.01 | 0.849400 | 3.312623e-60 | 6.271965e-57 |
MsG0380015703.01 | MsG0780036486.01 | 0.835375 | 1.740531e-56 | 2.124479e-53 |
MsG0380015784.01 | MsG0780036486.01 | 0.837723 | 4.392918e-57 | 5.757200e-54 |
MsG0380016191.01 | MsG0780036486.01 | -0.808468 | 3.052151e-50 | 1.746547e-47 |
MsG0380016347.01 | MsG0780036486.01 | -0.854448 | 1.222692e-61 | 2.731381e-58 |
MsG0380016505.01 | MsG0780036486.01 | 0.801356 | 9.358730e-49 | 4.460239e-46 |
MsG0380016540.01 | MsG0780036486.01 | 0.828720 | 7.685281e-55 | 7.701259e-52 |
MsG0380016555.01 | MsG0780036486.01 | 0.819334 | 1.226369e-52 | 9.408907e-50 |
MsG0380016671.01 | MsG0780036486.01 | 0.856890 | 2.369675e-62 | 5.741203e-59 |
MsG0380016771.01 | MsG0780036486.01 | 0.815226 | 1.030261e-51 | 7.061637e-49 |
MsG0380016820.01 | MsG0780036486.01 | 0.844682 | 6.498984e-59 | 1.057291e-55 |
MsG0380017085.01 | MsG0780036486.01 | 0.839024 | 2.028991e-57 | 2.766596e-54 |
MsG0380017094.01 | MsG0780036486.01 | -0.808745 | 2.663357e-50 | 1.535052e-47 |
MsG0380017198.01 | MsG0780036486.01 | 0.809868 | 1.529626e-50 | 9.083759e-48 |
MsG0380017258.01 | MsG0780036486.01 | 0.804500 | 2.096909e-49 | 1.082847e-46 |
MsG0380017931.01 | MsG0780036486.01 | 0.803547 | 3.309721e-49 | 1.667940e-46 |
MsG0480018091.01 | MsG0780036486.01 | -0.823853 | 1.107505e-53 | 9.649024e-51 |
MsG0480018124.01 | MsG0780036486.01 | 0.807718 | 4.407377e-50 | 2.472822e-47 |
MsG0480018423.01 | MsG0780036486.01 | 0.802229 | 6.195374e-49 | 3.018621e-46 |
MsG0580026175.01 | MsG0780036486.01 | 0.826556 | 2.543294e-54 | 2.393061e-51 |
MsG0580026450.01 | MsG0780036486.01 | 0.816260 | 6.059601e-52 | 4.273155e-49 |
MsG0580027103.01 | MsG0780036486.01 | 0.817823 | 2.700037e-52 | 1.987214e-49 |
MsG0580027394.01 | MsG0780036486.01 | 0.819404 | 1.182381e-52 | 9.089911e-50 |
MsG0580027980.01 | MsG0780036486.01 | 0.821597 | 3.709954e-53 | 3.031572e-50 |
MsG0580028551.01 | MsG0780036486.01 | 0.812484 | 4.141544e-51 | 2.636600e-48 |
MsG0580028630.01 | MsG0780036486.01 | 0.885854 | 5.675150e-72 | 3.958430e-68 |
MsG0580029236.01 | MsG0780036486.01 | 0.800771 | 1.232583e-48 | 5.787693e-46 |
MsG0580029549.01 | MsG0780036486.01 | 0.800076 | 1.707302e-48 | 7.877073e-46 |
MsG0580029734.01 | MsG0780036486.01 | 0.803463 | 3.445203e-49 | 1.732410e-46 |
MsG0580029879.01 | MsG0780036486.01 | 0.807454 | 5.014130e-50 | 2.794089e-47 |
MsG0580029925.01 | MsG0780036486.01 | 0.808126 | 3.609451e-50 | 2.046948e-47 |
MsG0580030010.01 | MsG0780036486.01 | 0.820818 | 5.608780e-53 | 4.485147e-50 |
MsG0680030350.01 | MsG0780036486.01 | 0.824809 | 6.601583e-54 | 5.910695e-51 |
MsG0680030356.01 | MsG0780036486.01 | -0.849898 | 2.405324e-60 | 4.629162e-57 |
MsG0680030515.01 | MsG0780036486.01 | 0.810898 | 9.168575e-51 | 5.595267e-48 |
MsG0680030555.01 | MsG0780036486.01 | 0.826533 | 2.574997e-54 | 2.421347e-51 |
MsG0280006711.01 | MsG0780036486.01 | -0.811833 | 5.745139e-51 | 3.593517e-48 |
MsG0280006993.01 | MsG0780036486.01 | 0.806899 | 6.575232e-50 | 3.611300e-47 |
MsG0280007193.01 | MsG0780036486.01 | -0.831077 | 2.047674e-55 | 2.198457e-52 |
MsG0280007307.01 | MsG0780036486.01 | 0.814489 | 1.501502e-51 | 1.008919e-48 |
MsG0280007310.01 | MsG0780036486.01 | 0.806787 | 6.943059e-50 | 3.802302e-47 |
MsG0280007501.01 | MsG0780036486.01 | 0.805552 | 1.263433e-49 | 6.703608e-47 |
MsG0280007575.01 | MsG0780036486.01 | 0.804520 | 2.077047e-49 | 1.073144e-46 |
MsG0280007647.01 | MsG0780036486.01 | 0.835493 | 1.625204e-56 | 1.990632e-53 |
MsG0280007903.01 | MsG0780036486.01 | 0.845019 | 5.270724e-59 | 8.666881e-56 |
MsG0280008390.01 | MsG0780036486.01 | 0.827668 | 1.377432e-54 | 1.338654e-51 |
MsG0280008391.01 | MsG0780036486.01 | 0.815466 | 9.113719e-52 | 6.288659e-49 |
MsG0280008392.01 | MsG0780036486.01 | 0.816104 | 6.566505e-52 | 4.610769e-49 |
MsG0280008394.01 | MsG0780036486.01 | 0.836540 | 8.816017e-57 | 1.114345e-53 |
MsG0280008395.01 | MsG0780036486.01 | 0.804158 | 2.470925e-49 | 1.264885e-46 |
MsG0280008928.01 | MsG0780036486.01 | 0.837163 | 6.110961e-57 | 7.871117e-54 |
MsG0280008929.01 | MsG0780036486.01 | 0.838404 | 2.933930e-57 | 3.925678e-54 |
MsG0280009256.01 | MsG0780036486.01 | 0.828144 | 1.058383e-54 | 1.043041e-51 |
MsG0280009685.01 | MsG0780036486.01 | 0.809014 | 2.333157e-50 | 1.354372e-47 |
MsG0280009755.01 | MsG0780036486.01 | 0.832402 | 9.649281e-56 | 1.077382e-52 |
MsG0280009756.01 | MsG0780036486.01 | 0.819445 | 1.157010e-52 | 8.905413e-50 |
MsG0280010353.01 | MsG0780036486.01 | 0.818735 | 1.678114e-52 | 1.266475e-49 |
MsG0280010532.01 | MsG0780036486.01 | -0.815106 | 1.095901e-51 | 7.486794e-49 |
MsG0680035859.01 | MsG0780036486.01 | 0.828678 | 7.865185e-55 | 7.872336e-52 |
MsG0680035877.01 | MsG0780036486.01 | 0.813651 | 2.298328e-51 | 1.509608e-48 |
MsG0780035960.01 | MsG0780036486.01 | 0.844206 | 8.724519e-59 | 1.398395e-55 |
MsG0780036190.01 | MsG0780036486.01 | 0.801585 | 8.399161e-49 | 4.025936e-46 |
MsG0780036486.01 | MsG0780036659.01 | 0.841128 | 5.733809e-58 | 8.343521e-55 |
MsG0780036486.01 | MsG0780036757.01 | 0.818858 | 1.574340e-52 | 1.192261e-49 |
MsG0780036486.01 | MsG0780036979.01 | 0.809364 | 1.962820e-50 | 1.150202e-47 |
MsG0780036486.01 | MsG0780037093.01 | 0.840407 | 8.858819e-58 | 1.260714e-54 |
MsG0780036486.01 | MsG0780037157.01 | 0.817800 | 2.733018e-52 | 2.010221e-49 |
MsG0780036486.01 | MsG0780038056.01 | 0.809428 | 1.901461e-50 | 1.116136e-47 |
MsG0780036486.01 | MsG0780038584.01 | -0.807409 | 5.126826e-50 | 2.853498e-47 |
MsG0780036486.01 | MsG0780038744.01 | 0.806209 | 9.194384e-50 | 4.961577e-47 |
MsG0780036486.01 | MsG0780038847.01 | 0.815676 | 8.181745e-52 | 5.678088e-49 |
MsG0780036486.01 | MsG0780038907.01 | 0.801859 | 7.379955e-49 | 3.562287e-46 |
MsG0780036486.01 | MsG0780039054.01 | 0.803564 | 3.282265e-49 | 1.654879e-46 |
MsG0780036486.01 | MsG0780039429.01 | 0.808888 | 2.482005e-50 | 1.435924e-47 |
MsG0780036486.01 | MsG0780040422.01 | 0.809508 | 1.827626e-50 | 1.075042e-47 |
MsG0780036486.01 | MsG0780040430.01 | 0.829440 | 5.142683e-55 | 5.263602e-52 |
MsG0780036486.01 | MsG0780041137.01 | 0.832169 | 1.101741e-55 | 1.221601e-52 |
MsG0780036486.01 | MsG0780041391.01 | 0.825479 | 4.583167e-54 | 4.182226e-51 |
MsG0780036486.01 | MsG0780041435.01 | 0.803590 | 3.241849e-49 | 1.635558e-46 |
MsG0780036486.01 | MsG0780041440.01 | 0.812685 | 3.743089e-51 | 2.395537e-48 |
MsG0780036486.01 | MsG0780041673.01 | 0.829373 | 5.339613e-55 | 5.455102e-52 |
MsG0780036486.01 | MsG0780041692.01 | 0.803686 | 3.096454e-49 | 1.565987e-46 |
MsG0780036486.01 | MsG0780041747.01 | 0.834037 | 3.778663e-56 | 4.430534e-53 |
MsG0780036486.01 | MsG0880041947.01 | 0.802784 | 4.759336e-49 | 2.352122e-46 |
MsG0780036486.01 | MsG0880042026.01 | 0.800261 | 1.566212e-48 | 7.259981e-46 |
MsG0780036486.01 | MsG0880043029.01 | 0.837385 | 5.363727e-57 | 6.955212e-54 |
MsG0780036486.01 | MsG0880043030.01 | 0.800683 | 1.284545e-48 | 6.018409e-46 |
MsG0780036486.01 | MsG0880044005.01 | 0.833424 | 5.377567e-56 | 6.190405e-53 |
MsG0780036486.01 | MsG0880044036.01 | 0.817954 | 2.522952e-52 | 1.863457e-49 |
MsG0780036486.01 | MsG0880044142.01 | 0.844568 | 6.972863e-59 | 1.130435e-55 |
MsG0780036486.01 | MsG0880044487.01 | 0.800468 | 1.421123e-48 | 6.621937e-46 |
MsG0780036486.01 | MsG0880044704.01 | 0.841114 | 5.780768e-58 | 8.407929e-55 |
MsG0780036486.01 | MsG0880045010.01 | -0.807234 | 5.584918e-50 | 3.094220e-47 |
MsG0780036486.01 | MsG0880045765.01 | 0.818337 | 2.065898e-52 | 1.542184e-49 |
MsG0780036486.01 | MsG0880046765.01 | 0.820029 | 8.512200e-53 | 6.659855e-50 |
MsG0780036486.01 | MsG0880047422.01 | -0.801415 | 9.102363e-49 | 4.344369e-46 |
MsG0780036486.01 | MsG0880047481.01 | -0.816510 | 5.329310e-52 | 3.783520e-49 |
MsG0780036486.01 | MsG0880047696.01 | 0.805260 | 1.454939e-49 | 7.661805e-47 |
MsG0780036486.01 | MsG0880047703.01 | 0.838508 | 2.758487e-57 | 3.702549e-54 |
MsG0780036486.01 | MsG0880047754.01 | 0.822580 | 2.195855e-53 | 1.845541e-50 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780036486.01.T01 | MTR_4g076090 | 97.059 | 68 | 2 | 0 | 1 | 68 | 1 | 68 | 1.81e-44 | 137 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780036486.01.T01 | AT3G22210 | 62.500 | 64 | 23 | 1 | 5 | 68 | 6 | 68 | 1.55e-20 | 77.0 |
Find 17 sgRNAs with CRISPR-Local
Find 20 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAATTCGCTCTTCCAGTATT+GGG | 0.341545 | 7:+8823262 | MsG0780036486.01.T01:CDS |
GTCTTCTAGCTCGCCTCTCT+CGG | 0.346161 | 7:-8823493 | None:intergenic |
GACAGAAATCACTTCAAGAT+TGG | 0.349085 | 7:+8823423 | MsG0780036486.01.T01:intron |
GCCGCAACAATGCCCAATAC+TGG | 0.366936 | 7:-8823274 | None:intergenic |
AGCTCGCCTCTCTCGGGAGC+TGG | 0.374844 | 7:-8823486 | None:intergenic |
GCAATTCGCTCTTCCAGTAT+TGG | 0.399436 | 7:+8823261 | MsG0780036486.01.T01:CDS |
CTCTCTCGGGAGCTGGATGT+TGG | 0.452110 | 7:-8823479 | None:intergenic |
AGTAGCAAATTGTTTGTACT+AGG | 0.459932 | 7:+8823628 | MsG0780036486.01.T01:three_prime_UTR |
TCCAGTATTGGGCATTGTTG+CGG | 0.480204 | 7:+8823273 | MsG0780036486.01.T01:CDS |
ACAGAAATCACTTCAAGATT+GGG | 0.482353 | 7:+8823424 | MsG0780036486.01.T01:intron |
ATTGAAACTCACTGCATAGA+AGG | 0.485260 | 7:-8823308 | None:intergenic |
TCTTCTAGCTCGCCTCTCTC+GGG | 0.500761 | 7:-8823492 | None:intergenic |
ACTAACAAGAACTATTGAAA+AGG | 0.512776 | 7:-8823659 | None:intergenic |
GATGATTCTGAATCAGAGAA+TGG | 0.538128 | 7:+8823446 | MsG0780036486.01.T01:CDS |
CAACATCCAGCTCCCGAGAG+AGG | 0.612999 | 7:+8823480 | MsG0780036486.01.T01:CDS |
GAGTTTCAATGAGATTAGAG+AGG | 0.641117 | 7:+8823321 | MsG0780036486.01.T01:CDS |
GATTCTGAATCAGAGAATGG+AGG | 0.645594 | 7:+8823449 | MsG0780036486.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTCTTAATTTTTGATGCT+TGG | + | Chr7:8823588-8823607 | MsG0780036486.01.T01:three_prime_UTR | 20.0% |
!!! | CTGTCATAATTCAATTTTAT+AGG | - | Chr7:8823408-8823427 | None:intergenic | 20.0% |
! | ACTAACAAGAACTATTGAAA+AGG | - | Chr7:8823662-8823681 | None:intergenic | 25.0% |
!!! | CATTTGTCGAAGTTATTTTT+TGG | - | Chr7:8823534-8823553 | None:intergenic | 25.0% |
ACAGAAATCACTTCAAGATT+GGG | + | Chr7:8823424-8823443 | MsG0780036486.01.T01:intron | 30.0% | |
AGTAGCAAATTGTTTGTACT+AGG | + | Chr7:8823628-8823647 | MsG0780036486.01.T01:three_prime_UTR | 30.0% | |
ATTGAAACTCACTGCATAGA+AGG | - | Chr7:8823311-8823330 | None:intergenic | 35.0% | |
GACAGAAATCACTTCAAGAT+TGG | + | Chr7:8823423-8823442 | MsG0780036486.01.T01:intron | 35.0% | |
GAGTTTCAATGAGATTAGAG+AGG | + | Chr7:8823321-8823340 | MsG0780036486.01.T01:CDS | 35.0% | |
GATGATTCTGAATCAGAGAA+TGG | + | Chr7:8823446-8823465 | MsG0780036486.01.T01:CDS | 35.0% | |
CAATTCGCTCTTCCAGTATT+GGG | + | Chr7:8823262-8823281 | MsG0780036486.01.T01:CDS | 40.0% | |
GATTCTGAATCAGAGAATGG+AGG | + | Chr7:8823449-8823468 | MsG0780036486.01.T01:CDS | 40.0% | |
GCAATTCGCTCTTCCAGTAT+TGG | + | Chr7:8823261-8823280 | MsG0780036486.01.T01:CDS | 45.0% | |
! | TCCAGTATTGGGCATTGTTG+CGG | + | Chr7:8823273-8823292 | MsG0780036486.01.T01:CDS | 45.0% |
GCCGCAACAATGCCCAATAC+TGG | - | Chr7:8823277-8823296 | None:intergenic | 55.0% | |
!! | GTCTTCTAGCTCGCCTCTCT+CGG | - | Chr7:8823496-8823515 | None:intergenic | 55.0% |
!! | TCTTCTAGCTCGCCTCTCTC+GGG | - | Chr7:8823495-8823514 | None:intergenic | 55.0% |
CAACATCCAGCTCCCGAGAG+AGG | + | Chr7:8823480-8823499 | MsG0780036486.01.T01:CDS | 60.0% | |
CTCTCTCGGGAGCTGGATGT+TGG | - | Chr7:8823482-8823501 | None:intergenic | 60.0% | |
AGCTCGCCTCTCTCGGGAGC+TGG | - | Chr7:8823489-8823508 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr7 | gene | 8823250 | 8823687 | 8823250 | ID=MsG0780036486.01;Name=MsG0780036486.01 |
Chr7 | mRNA | 8823250 | 8823687 | 8823250 | ID=MsG0780036486.01.T01;Parent=MsG0780036486.01;Name=MsG0780036486.01.T01;_AED=0.03;_eAED=0.03;_QI=0|1|0.5|1|0|0|2|146|68 |
Chr7 | exon | 8823250 | 8823342 | 8823250 | ID=MsG0780036486.01.T01:exon:10185;Parent=MsG0780036486.01.T01 |
Chr7 | exon | 8823428 | 8823687 | 8823428 | ID=MsG0780036486.01.T01:exon:10186;Parent=MsG0780036486.01.T01 |
Chr7 | CDS | 8823250 | 8823342 | 8823250 | ID=MsG0780036486.01.T01:cds;Parent=MsG0780036486.01.T01 |
Chr7 | CDS | 8823428 | 8823541 | 8823428 | ID=MsG0780036486.01.T01:cds;Parent=MsG0780036486.01.T01 |
Chr7 | three_prime_UTR | 8823542 | 8823687 | 8823542 | ID=MsG0780036486.01.T01:three_prime_utr;Parent=MsG0780036486.01.T01 |
Gene Sequence |
Protein sequence |