Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580029132.01.T01 | XP_013454243.1 | 98.54 | 137 | 2 | 0 | 1 | 137 | 1 | 137 | 8.71E-95 | 279 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580029132.01.T01 | Q9LMK0 | 86.607 | 112 | 15 | 0 | 26 | 137 | 1 | 112 | 1.35E-70 | 210 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580029132.01.T01 | A0A072UET3 | 98.540 | 137 | 2 | 0 | 1 | 137 | 1 | 137 | 4.16e-95 | 279 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048197.01 | MsG0580029132.01 | 0.811370 | 7.243043e-51 | 4.475401e-48 |
| MsG0080048216.01 | MsG0580029132.01 | 0.861620 | 9.028763e-64 | 2.570363e-60 |
| MsG0080048687.01 | MsG0580029132.01 | 0.907817 | 3.363378e-81 | 6.067285e-77 |
| MsG0080048944.01 | MsG0580029132.01 | 0.805877 | 1.079462e-49 | 5.775757e-47 |
| MsG0080048968.01 | MsG0580029132.01 | 0.822506 | 2.284176e-53 | 1.915611e-50 |
| MsG0080048971.01 | MsG0580029132.01 | 0.923764 | 1.726865e-89 | 7.035238e-85 |
| MsG0180000135.01 | MsG0580029132.01 | 0.804064 | 2.584685e-49 | 1.319983e-46 |
| MsG0180000139.01 | MsG0580029132.01 | 0.812331 | 4.474269e-51 | 2.836774e-48 |
| MsG0180000227.01 | MsG0580029132.01 | 0.802327 | 5.913437e-49 | 2.888681e-46 |
| MsG0180000339.01 | MsG0580029132.01 | 0.902087 | 1.386413e-78 | 1.930448e-74 |
| MsG0180000575.01 | MsG0580029132.01 | 0.845921 | 3.004227e-59 | 5.085346e-56 |
| MsG0180000611.01 | MsG0580029132.01 | 0.800544 | 1.371550e-48 | 6.403331e-46 |
| MsG0180000614.01 | MsG0580029132.01 | 0.837554 | 4.853961e-57 | 6.327710e-54 |
| MsG0180000615.01 | MsG0580029132.01 | 0.829010 | 6.538547e-55 | 6.607786e-52 |
| MsG0180000743.01 | MsG0580029132.01 | 0.820185 | 7.839808e-53 | 6.160070e-50 |
| MsG0180003115.01 | MsG0580029132.01 | 0.875713 | 2.480261e-68 | 1.170149e-64 |
| MsG0180003117.01 | MsG0580029132.01 | 0.816157 | 6.390788e-52 | 4.493834e-49 |
| MsG0180003313.01 | MsG0580029132.01 | 0.865898 | 4.227438e-65 | 1.398022e-61 |
| MsG0180003612.01 | MsG0580029132.01 | 0.867689 | 1.137182e-65 | 4.005512e-62 |
| MsG0180003651.01 | MsG0580029132.01 | 0.803274 | 3.769226e-49 | 1.886144e-46 |
| MsG0180003693.01 | MsG0580029132.01 | 0.814711 | 1.340378e-51 | 9.060256e-49 |
| MsG0180003793.01 | MsG0580029132.01 | 0.929993 | 3.123681e-93 | 1.800393e-88 |
| MsG0180003984.01 | MsG0580029132.01 | 0.801901 | 7.234242e-49 | 3.495640e-46 |
| MsG0180004009.01 | MsG0580029132.01 | 0.890169 | 1.255664e-73 | 1.044099e-69 |
| MsG0180004016.01 | MsG0580029132.01 | 0.800680 | 1.286693e-48 | 6.027952e-46 |
| MsG0180004050.01 | MsG0580029132.01 | 0.803318 | 3.691058e-49 | 1.849079e-46 |
| MsG0180004128.01 | MsG0580029132.01 | 0.800851 | 1.187181e-48 | 5.586205e-46 |
| MsG0180004129.01 | MsG0580029132.01 | 0.902012 | 1.497261e-78 | 2.077643e-74 |
| MsG0180004130.01 | MsG0580029132.01 | 0.911922 | 3.509094e-83 | 7.695912e-79 |
| MsG0180004398.01 | MsG0580029132.01 | 0.805894 | 1.070942e-49 | 5.732591e-47 |
| MsG0180004509.01 | MsG0580029132.01 | 0.840156 | 1.030271e-57 | 1.454867e-54 |
| MsG0180004622.01 | MsG0580029132.01 | 0.820016 | 8.569281e-53 | 6.701984e-50 |
| MsG0180004767.01 | MsG0580029132.01 | 0.815673 | 8.193458e-52 | 5.685671e-49 |
| MsG0180004854.01 | MsG0580029132.01 | 0.875372 | 3.246551e-68 | 1.511999e-64 |
| MsG0180004861.01 | MsG0580029132.01 | 0.859196 | 4.887289e-63 | 1.280061e-59 |
| MsG0180004991.01 | MsG0580029132.01 | 0.800488 | 1.407685e-48 | 6.562862e-46 |
| MsG0180005361.01 | MsG0580029132.01 | 0.852432 | 4.634682e-61 | 9.682507e-58 |
| MsG0180005366.01 | MsG0580029132.01 | 0.876873 | 9.874906e-69 | 4.865402e-65 |
| MsG0180005426.01 | MsG0580029132.01 | 0.898932 | 3.264916e-77 | 3.945561e-73 |
| MsG0180005659.01 | MsG0580029132.01 | 0.816061 | 6.713321e-52 | 4.708367e-49 |
| MsG0180006013.01 | MsG0580029132.01 | 0.813917 | 2.008084e-51 | 1.328476e-48 |
| MsG0180006041.01 | MsG0580029132.01 | 0.807914 | 4.004947e-50 | 2.258389e-47 |
| MsG0280006305.01 | MsG0580029132.01 | 0.809875 | 1.524295e-50 | 9.053692e-48 |
| MsG0280006424.01 | MsG0580029132.01 | 0.874136 | 8.547186e-68 | 3.803877e-64 |
| MsG0280010776.01 | MsG0580029132.01 | 0.832963 | 7.001566e-56 | 7.949458e-53 |
| MsG0280010801.01 | MsG0580029132.01 | 0.949205 | 2.037546e-107 | 3.979258e-102 |
| MsG0280010995.01 | MsG0580029132.01 | 0.816268 | 6.036422e-52 | 4.257626e-49 |
| MsG0280011037.01 | MsG0580029132.01 | 0.806442 | 8.211390e-50 | 4.457348e-47 |
| MsG0280011234.01 | MsG0580029132.01 | 0.872743 | 2.514801e-67 | 1.064196e-63 |
| MsG0380011614.01 | MsG0580029132.01 | 0.831073 | 2.052592e-55 | 2.203407e-52 |
| MsG0380011643.01 | MsG0580029132.01 | 0.822349 | 2.484856e-53 | 2.074627e-50 |
| MsG0380012073.01 | MsG0580029132.01 | 0.939396 | 1.363548e-99 | 1.396681e-94 |
| MsG0380013641.01 | MsG0580029132.01 | 0.808002 | 3.835653e-50 | 2.168107e-47 |
| MsG0380014539.01 | MsG0580029132.01 | 0.805336 | 1.402358e-49 | 7.399657e-47 |
| MsG0480018477.01 | MsG0580029132.01 | 0.891295 | 4.525664e-74 | 3.944652e-70 |
| MsG0480020959.01 | MsG0580029132.01 | 0.858077 | 1.055335e-62 | 2.661066e-59 |
| MsG0480021006.01 | MsG0580029132.01 | 0.883893 | 3.050460e-71 | 1.970025e-67 |
| MsG0480021159.01 | MsG0580029132.01 | 0.882492 | 9.958584e-71 | 6.078780e-67 |
| MsG0480021832.01 | MsG0580029132.01 | 0.860487 | 1.995540e-63 | 5.464217e-60 |
| MsG0480022223.01 | MsG0580029132.01 | 0.806032 | 1.001456e-49 | 5.379705e-47 |
| MsG0480022693.01 | MsG0580029132.01 | 0.833939 | 3.996844e-56 | 4.673091e-53 |
| MsG0480022764.01 | MsG0580029132.01 | 0.805359 | 1.386511e-49 | 7.320729e-47 |
| MsG0480022913.01 | MsG0580029132.01 | 0.821985 | 3.017979e-53 | 2.493453e-50 |
| MsG0480022960.01 | MsG0580029132.01 | 0.876709 | 1.125208e-68 | 5.510077e-65 |
| MsG0480023149.01 | MsG0580029132.01 | 0.962763 | 2.885527e-121 | 1.478267e-115 |
| MsG0480023221.01 | MsG0580029132.01 | 0.818706 | 1.703727e-52 | 1.284741e-49 |
| MsG0480023240.01 | MsG0580029132.01 | 0.816762 | 4.679669e-52 | 3.345442e-49 |
| MsG0480023399.01 | MsG0580029132.01 | 0.850142 | 2.055381e-60 | 3.987195e-57 |
| MsG0480023467.01 | MsG0580029132.01 | 0.937334 | 4.098661e-98 | 3.691062e-93 |
| MsG0480023559.01 | MsG0580029132.01 | 0.888092 | 8.018200e-73 | 6.122922e-69 |
| MsG0480023771.01 | MsG0580029132.01 | 0.854171 | 1.469856e-61 | 3.254541e-58 |
| MsG0480023970.01 | MsG0580029132.01 | 0.834477 | 2.930169e-56 | 3.481524e-53 |
| MsG0580024191.01 | MsG0580029132.01 | 0.804030 | 2.627118e-49 | 1.340426e-46 |
| MsG0580024369.01 | MsG0580029132.01 | 0.921098 | 5.531433e-88 | 1.939961e-83 |
| MsG0580025400.01 | MsG0580029132.01 | 0.824701 | 6.998874e-54 | 6.247147e-51 |
| MsG0580025408.01 | MsG0580029132.01 | 0.822808 | 1.942723e-53 | 1.643287e-50 |
| MsG0380015027.01 | MsG0580029132.01 | 0.819616 | 1.057981e-52 | 8.181462e-50 |
| MsG0380015494.01 | MsG0580029132.01 | 0.800450 | 1.432860e-48 | 6.673790e-46 |
| MsG0380015818.01 | MsG0580029132.01 | 0.824585 | 7.451989e-54 | 6.629381e-51 |
| MsG0380016290.01 | MsG0580029132.01 | 0.860747 | 1.664976e-63 | 4.599952e-60 |
| MsG0380016389.01 | MsG0580029132.01 | 0.856382 | 3.342131e-62 | 7.962491e-59 |
| MsG0380016577.01 | MsG0580029132.01 | 0.855835 | 4.831630e-62 | 1.130288e-58 |
| MsG0380016622.01 | MsG0580029132.01 | 0.809676 | 1.682144e-50 | 9.939299e-48 |
| MsG0380016733.01 | MsG0580029132.01 | 0.857322 | 1.765845e-62 | 4.341349e-59 |
| MsG0380016775.01 | MsG0580029132.01 | 0.817226 | 3.680580e-52 | 2.664792e-49 |
| MsG0380017382.01 | MsG0580029132.01 | 0.890400 | 1.020055e-73 | 8.564530e-70 |
| MsG0380017556.01 | MsG0580029132.01 | 0.888354 | 6.359217e-73 | 4.910072e-69 |
| MsG0480018084.01 | MsG0580029132.01 | 0.893160 | 8.137377e-75 | 7.665465e-71 |
| MsG0480018335.01 | MsG0580029132.01 | 0.808608 | 2.848958e-50 | 1.636129e-47 |
| MsG0580026157.01 | MsG0580029132.01 | 0.833728 | 4.514717e-56 | 5.244268e-53 |
| MsG0580026226.01 | MsG0580029132.01 | 0.815287 | 9.987895e-52 | 6.857856e-49 |
| MsG0580027043.01 | MsG0580029132.01 | 0.924957 | 3.514851e-90 | 1.527515e-85 |
| MsG0580028597.01 | MsG0580029132.01 | 0.811016 | 8.642739e-51 | 5.291243e-48 |
| MsG0580029132.01 | MsG0580029283.01 | 0.847417 | 1.172026e-59 | 2.081718e-56 |
| MsG0580029132.01 | MsG0580029300.01 | 0.873377 | 1.541839e-67 | 6.676251e-64 |
| MsG0580029132.01 | MsG0580029370.01 | 0.855457 | 6.228099e-62 | 1.438889e-58 |
| MsG0580029132.01 | MsG0580029702.01 | 0.841213 | 5.446718e-58 | 7.946445e-55 |
| MsG0580029132.01 | MsG0580029801.01 | 0.804389 | 2.211858e-49 | 1.138982e-46 |
| MsG0580029132.01 | MsG0580030003.01 | 0.809275 | 2.050412e-50 | 1.198652e-47 |
| MsG0580029132.01 | MsG0680030408.01 | 0.806872 | 6.659923e-50 | 3.655375e-47 |
| MsG0580029132.01 | MsG0680030968.01 | 0.822006 | 2.984296e-53 | 2.467156e-50 |
| MsG0580029132.01 | MsG0680031628.01 | 0.824945 | 6.131295e-54 | 5.510920e-51 |
| MsG0580029132.01 | MsG0680031763.01 | 0.848667 | 5.294915e-60 | 9.789607e-57 |
| MsG0580029132.01 | MsG0680032770.01 | 0.918133 | 2.269039e-86 | 6.800190e-82 |
| MsG0580029132.01 | MsG0680034061.01 | 0.810433 | 1.155614e-50 | 6.964700e-48 |
| MsG0580029132.01 | MsG0680034671.01 | 0.837734 | 4.364033e-57 | 5.721396e-54 |
| MsG0580029132.01 | MsG0680035306.01 | 0.820680 | 6.036007e-53 | 4.807823e-50 |
| MsG0580029132.01 | MsG0680035577.01 | 0.824711 | 6.959879e-54 | 6.214306e-51 |
| MsG0580029132.01 | MsG0680035848.01 | 0.909207 | 7.349936e-82 | 1.413610e-77 |
| MsG0580029132.01 | MsG0680035854.01 | 0.819670 | 1.028286e-52 | 7.964241e-50 |
| MsG0580029132.01 | MsG0680035888.01 | 0.804476 | 2.121519e-49 | 1.094891e-46 |
| MsG0580029132.01 | MsG0780036240.01 | 0.906135 | 2.049306e-80 | 3.423539e-76 |
| MsG0580029132.01 | MsG0780036547.01 | 0.850177 | 2.009710e-60 | 3.903133e-57 |
| MsG0580029132.01 | MsG0780036822.01 | 0.890798 | 7.114441e-74 | 6.074214e-70 |
| MsG0580029132.01 | MsG0780037240.01 | 0.807155 | 5.803040e-50 | 3.208487e-47 |
| MsG0580029132.01 | MsG0780038400.01 | 0.909977 | 3.134387e-82 | 6.258533e-78 |
| MsG0580029132.01 | MsG0780038587.01 | 0.944047 | 3.985152e-103 | 5.580260e-98 |
| MsG0580029132.01 | MsG0780039271.01 | 0.844421 | 7.642146e-59 | 1.233058e-55 |
| MsG0580029132.01 | MsG0780039340.01 | 0.828653 | 7.977284e-55 | 7.978957e-52 |
| MsG0580029132.01 | MsG0780039643.01 | 0.850535 | 1.594588e-60 | 3.133286e-57 |
| MsG0580029132.01 | MsG0780039848.01 | 0.849661 | 2.801824e-60 | 5.350321e-57 |
| MsG0580029132.01 | MsG0780039943.01 | 0.803190 | 3.924151e-49 | 1.959467e-46 |
| MsG0580029132.01 | MsG0780040070.01 | 0.809774 | 1.602298e-50 | 9.492351e-48 |
| MsG0580029132.01 | MsG0780040338.01 | 0.895596 | 8.246706e-76 | 8.615856e-72 |
| MsG0580029132.01 | MsG0780040511.01 | 0.841176 | 5.568482e-58 | 8.115262e-55 |
| MsG0580029132.01 | MsG0780040569.01 | 0.838354 | 3.023240e-57 | 4.038746e-54 |
| MsG0580029132.01 | MsG0780040718.01 | 0.815000 | 1.156875e-51 | 7.881176e-49 |
| MsG0580029132.01 | MsG0780040782.01 | 0.839368 | 1.652655e-57 | 2.277385e-54 |
| MsG0580029132.01 | MsG0780040900.01 | 0.865904 | 4.208105e-65 | 1.391940e-61 |
| MsG0580029132.01 | MsG0780041147.01 | 0.894036 | 3.597515e-75 | 3.515639e-71 |
| MsG0580029132.01 | MsG0780041223.01 | 0.922770 | 6.378386e-89 | 2.459419e-84 |
| MsG0580029132.01 | MsG0780041224.01 | 0.829473 | 5.046889e-55 | 5.170483e-52 |
| MsG0580029132.01 | MsG0780041295.01 | 0.844049 | 9.615836e-59 | 1.533788e-55 |
| MsG0580029132.01 | MsG0780041332.01 | 0.829589 | 4.729948e-55 | 4.862429e-52 |
| MsG0580029132.01 | MsG0780041423.01 | 0.808874 | 2.499683e-50 | 1.445612e-47 |
| MsG0580029132.01 | MsG0780041462.01 | 0.829326 | 5.481560e-55 | 5.592672e-52 |
| MsG0580029132.01 | MsG0780041490.01 | 0.805556 | 1.260807e-49 | 6.690352e-47 |
| MsG0580029132.01 | MsG0780041519.01 | 0.869122 | 3.921344e-66 | 1.454730e-62 |
| MsG0580029132.01 | MsG0880041967.01 | 0.848005 | 8.073034e-60 | 1.460909e-56 |
| MsG0580029132.01 | MsG0880042125.01 | 0.881596 | 2.104854e-70 | 1.240744e-66 |
| MsG0580029132.01 | MsG0880042519.01 | 0.801710 | 7.919477e-49 | 3.808009e-46 |
| MsG0580029132.01 | MsG0880042604.01 | 0.809886 | 1.515758e-50 | 9.005471e-48 |
| MsG0580029132.01 | MsG0880042991.01 | 0.855475 | 6.153730e-62 | 1.422554e-58 |
| MsG0580029132.01 | MsG0880043517.01 | 0.866475 | 2.775326e-65 | 9.365813e-62 |
| MsG0580029132.01 | MsG0880043592.01 | 0.802308 | 5.965815e-49 | 2.912884e-46 |
| MsG0580029132.01 | MsG0880043770.01 | 0.916859 | 1.071385e-85 | 3.004649e-81 |
| MsG0580029132.01 | MsG0880044711.01 | 0.825459 | 4.633062e-54 | 4.225244e-51 |
| MsG0580029132.01 | MsG0880045072.01 | 0.820582 | 6.357924e-53 | 5.050372e-50 |
| MsG0580029132.01 | MsG0880045656.01 | 0.866317 | 3.115633e-65 | 1.045636e-61 |
| MsG0580029132.01 | MsG0880046074.01 | 0.814872 | 1.234529e-51 | 8.380714e-49 |
| MsG0580029132.01 | MsG0880046177.01 | 0.905817 | 2.875236e-80 | 4.732271e-76 |
| MsG0580029132.01 | MsG0880046253.01 | 0.836703 | 8.012591e-57 | 1.017803e-53 |
| MsG0580029132.01 | MsG0880046444.01 | 0.916569 | 1.522136e-85 | 4.206804e-81 |
| MsG0580029132.01 | MsG0880046575.01 | 0.846122 | 2.647834e-59 | 4.510764e-56 |
| MsG0580029132.01 | MsG0880046879.01 | 0.880714 | 4.370791e-70 | 2.490849e-66 |
| MsG0580029132.01 | MsG0880046933.01 | 0.859259 | 4.679312e-63 | 1.228110e-59 |
| MsG0580029132.01 | MsG0880047082.01 | 0.867268 | 1.550658e-65 | 5.380776e-62 |
| MsG0580029132.01 | MsG0880047388.01 | 0.876763 | 1.077674e-68 | 5.288045e-65 |
| MsG0580029132.01 | MsG0880047428.01 | 0.838784 | 2.341207e-57 | 3.169012e-54 |
| MsG0580029132.01 | MsG0880047607.01 | 0.807744 | 4.352555e-50 | 2.443749e-47 |
| MsG0280006741.01 | MsG0580029132.01 | 0.865629 | 5.142591e-65 | 1.684799e-61 |
| MsG0280006819.01 | MsG0580029132.01 | 0.870246 | 1.687173e-66 | 6.518154e-63 |
| MsG0280006836.01 | MsG0580029132.01 | 0.870078 | 1.914207e-66 | 7.350321e-63 |
| MsG0280006993.01 | MsG0580029132.01 | 0.881073 | 3.250171e-70 | 1.877039e-66 |
| MsG0280007161.01 | MsG0580029132.01 | 0.813281 | 2.771781e-51 | 1.802327e-48 |
| MsG0280007440.01 | MsG0580029132.01 | 0.804583 | 2.015213e-49 | 1.042926e-46 |
| MsG0280007634.01 | MsG0580029132.01 | 0.802960 | 4.376735e-49 | 2.172639e-46 |
| MsG0280007643.01 | MsG0580029132.01 | 0.826937 | 2.062409e-54 | 1.962145e-51 |
| MsG0280007847.01 | MsG0580029132.01 | 0.852834 | 3.559275e-61 | 7.535426e-58 |
| MsG0280008118.01 | MsG0580029132.01 | 0.936935 | 7.821084e-98 | 6.881051e-93 |
| MsG0280008283.01 | MsG0580029132.01 | 0.840581 | 7.975748e-58 | 1.141100e-54 |
| MsG0280009111.01 | MsG0580029132.01 | 0.840342 | 9.211278e-58 | 1.308072e-54 |
| MsG0280009141.01 | MsG0580029132.01 | 0.875232 | 3.622857e-68 | 1.679235e-64 |
| MsG0280009372.01 | MsG0580029132.01 | 0.848777 | 4.937157e-60 | 9.161022e-57 |
| MsG0280009375.01 | MsG0580029132.01 | 0.931504 | 3.423138e-94 | 2.166195e-89 |
| MsG0280009575.01 | MsG0580029132.01 | 0.824690 | 7.041210e-54 | 6.283072e-51 |
| MsG0280010002.01 | MsG0580029132.01 | 0.834613 | 2.708414e-56 | 3.231008e-53 |
| MsG0280010130.01 | MsG0580029132.01 | 0.809391 | 1.936368e-50 | 1.135502e-47 |
| MsG0280010258.01 | MsG0580029132.01 | 0.809864 | 1.532879e-50 | 9.101989e-48 |
| MsG0280010383.01 | MsG0580029132.01 | 0.831313 | 1.791373e-55 | 1.936722e-52 |
| MsG0280010495.01 | MsG0580029132.01 | 0.933270 | 2.422746e-95 | 1.704667e-90 |
| MsG0280010525.01 | MsG0580029132.01 | 0.863593 | 2.228132e-64 | 6.791026e-61 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0880042050.01 | MsG0580029132.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580029132.01.T01 | MTR_5g081705 | 98.540 | 137 | 2 | 0 | 1 | 137 | 1 | 137 | 1.05e-98 | 279 |
| MsG0580029132.01.T01 | MTR_5g081705 | 98.387 | 124 | 2 | 0 | 1 | 124 | 1 | 124 | 1.24e-88 | 253 |
| MsG0580029132.01.T01 | MTR_0699s0020 | 93.750 | 112 | 7 | 0 | 26 | 137 | 1 | 112 | 4.72e-76 | 221 |
| MsG0580029132.01.T01 | MTR_0699s0010 | 92.857 | 112 | 8 | 0 | 26 | 137 | 1 | 112 | 2.32e-75 | 219 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580029132.01.T01 | AT1G07070 | 86.607 | 112 | 15 | 0 | 26 | 137 | 1 | 112 | 1.38e-71 | 210 |
| MsG0580029132.01.T01 | AT1G74270 | 87.500 | 112 | 14 | 0 | 26 | 137 | 1 | 112 | 1.74e-71 | 209 |
| MsG0580029132.01.T01 | AT3G55750 | 88.288 | 111 | 13 | 0 | 27 | 137 | 1 | 111 | 1.18e-70 | 207 |
| MsG0580029132.01.T01 | AT1G41880 | 87.387 | 111 | 14 | 0 | 27 | 137 | 1 | 111 | 1.72e-70 | 207 |
| MsG0580029132.01.T01 | AT1G41880 | 87.387 | 111 | 14 | 0 | 27 | 137 | 1 | 111 | 1.72e-70 | 207 |
Find 69 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAAGAATTACCATTGATTT+TGG | 0.162742 | 5:-92753749 | None:intergenic |
| GTTGAGTAATTATAGGTAAT+TGG | 0.232438 | 5:-92755964 | None:intergenic |
| GAAGCAGCACAGATTCATTT+TGG | 0.271979 | 5:-92752613 | None:intergenic |
| CATCTTCACACCAATCAAAA+TGG | 0.286862 | 5:+92752674 | MsG0580029132.01.T01:CDS |
| GAGGAGCTCCATTTGAGATT+TGG | 0.301884 | 5:-92755883 | None:intergenic |
| ACACCAATCAAAATGGTTAA+AGG | 0.309838 | 5:+92752681 | MsG0580029132.01.T01:CDS |
| CTTGAAACCAAAACCCTAAC+TGG | 0.311882 | 5:+92752553 | MsG0580029132.01.T01:five_prime_UTR |
| TACGTCAGGGGTACAGTTCT+TGG | 0.315019 | 5:+92752870 | MsG0580029132.01.T01:CDS |
| GAAGCCACTATCGCTGCATT+TGG | 0.347853 | 5:+92753660 | MsG0580029132.01.T01:CDS |
| ATTTGTTTGTGCAGGGAGCC+AGG | 0.348132 | 5:+92753842 | MsG0580029132.01.T01:intron |
| GAATTCAACATCCTAGAAAA+AGG | 0.352289 | 5:-92755799 | None:intergenic |
| AAGCCACTATCGCTGCATTT+GGG | 0.372191 | 5:+92753661 | MsG0580029132.01.T01:CDS |
| GAGTGGGCCAGTTAGGGTTT+TGG | 0.375076 | 5:-92752560 | None:intergenic |
| TTGTAATCAGGCTTTACGTC+AGG | 0.401581 | 5:+92752856 | MsG0580029132.01.T01:intron |
| ATGTATCCAAGCAATATATA+AGG | 0.407008 | 5:+92753877 | MsG0580029132.01.T01:CDS |
| GAGAAGGTTGCATGGTATGC+TGG | 0.411472 | 5:+92753593 | MsG0580029132.01.T01:CDS |
| AAATTACCTTATATATTGCT+TGG | 0.412163 | 5:-92753883 | None:intergenic |
| ATCTGAACAAGAGAGGTGTT+TGG | 0.416693 | 5:-92753551 | None:intergenic |
| GACGACAAGGAGAACGTATC+AGG | 0.417479 | 5:+92752703 | MsG0580029132.01.T01:CDS |
| TTAAACCGAGTGGGCCAGTT+AGG | 0.422407 | 5:-92752567 | None:intergenic |
| CTATCGCTGCATTTGGGGTA+AGG | 0.428656 | 5:+92753667 | MsG0580029132.01.T01:CDS |
| TTCTAGGGTTCTTATACACT+TGG | 0.436401 | 5:-92752590 | None:intergenic |
| AATGCAAAGACAACCAAAAC+AGG | 0.438347 | 5:-92755742 | None:intergenic |
| TAAGAAAAGCCCAATGGATT+GGG | 0.444500 | 5:+92752530 | None:intergenic |
| TGTTTAGTCCAAATCTCAAA+TGG | 0.449039 | 5:+92755875 | MsG0580029132.01.T01:three_prime_UTR |
| TCTGAACAAGAGAGGTGTTT+GGG | 0.453404 | 5:-92753550 | None:intergenic |
| TACCCCAAATGCAGCGATAG+TGG | 0.457668 | 5:-92753664 | None:intergenic |
| GTTTGGGTATTGATTTACCT+TGG | 0.466066 | 5:-92753534 | None:intergenic |
| ATGGTATGCTGGGAAGAAAT+TGG | 0.469927 | 5:+92753604 | MsG0580029132.01.T01:CDS |
| CTCTGTTAGTGTTCGTTCGG+CGG | 0.470432 | 5:-92752635 | None:intergenic |
| GCTTCCATCCTTCTTCACCT+TGG | 0.472167 | 5:-92753642 | None:intergenic |
| TGTCTCTGTTAGTGTTCGTT+CGG | 0.488528 | 5:-92752638 | None:intergenic |
| TAAACCGAGTGGGCCAGTTA+GGG | 0.493173 | 5:-92752566 | None:intergenic |
| ACCTCTCTTGTTCAGATCGA+GGG | 0.499812 | 5:+92753557 | MsG0580029132.01.T01:CDS |
| GCATTTGGGGTAAGGTTACC+AGG | 0.512393 | 5:+92753675 | MsG0580029132.01.T01:CDS |
| GCCACTGTTACCATGAGGCC+TGG | 0.523824 | 5:-92753693 | None:intergenic |
| AGAAGGTTGCATGGTATGCT+GGG | 0.527652 | 5:+92753594 | MsG0580029132.01.T01:CDS |
| TTTGTTTGTGCAGGGAGCCA+GGG | 0.534698 | 5:+92753843 | MsG0580029132.01.T01:intron |
| TTACAAGGCCAAGGTGAAGA+AGG | 0.537680 | 5:+92753634 | MsG0580029132.01.T01:CDS |
| ATACCATGCAACCTTCTCCT+TGG | 0.538743 | 5:-92753588 | None:intergenic |
| TAACCTACCACCAAAATCAA+TGG | 0.539094 | 5:+92753739 | MsG0580029132.01.T01:CDS |
| CCTACAGCCAGCAGTTGGAT+AGG | 0.547101 | 5:+92755699 | MsG0580029132.01.T01:three_prime_UTR |
| GGCATACATTTACAAGGCCA+AGG | 0.547418 | 5:+92753625 | MsG0580029132.01.T01:CDS |
| TGTAATCAGGCTTTACGTCA+GGG | 0.561952 | 5:+92752857 | MsG0580029132.01.T01:intron |
| GAAATTGGCATACATTTACA+AGG | 0.562532 | 5:+92753619 | MsG0580029132.01.T01:CDS |
| TCAATGACCTATCCAACTGC+TGG | 0.564480 | 5:-92755706 | None:intergenic |
| GTAATGTTGTTATAGGTCCA+AGG | 0.573819 | 5:+92753517 | MsG0580029132.01.T01:intron |
| CACAAAAGAACAAAATCAAG+AGG | 0.579461 | 5:-92755902 | None:intergenic |
| ATACATAAATACTCTAACCC+TGG | 0.583670 | 5:-92753860 | None:intergenic |
| GGTAAGGTTACCAGGCCTCA+TGG | 0.585246 | 5:+92753683 | MsG0580029132.01.T01:CDS |
| AAAACCCTAACTGGCCCACT+CGG | 0.589239 | 5:+92752562 | MsG0580029132.01.T01:five_prime_UTR |
| AAGGCCAAGGTGAAGAAGGA+TGG | 0.591334 | 5:+92753638 | MsG0580029132.01.T01:CDS |
| CACCTCTCTTGTTCAGATCG+AGG | 0.592183 | 5:+92753556 | MsG0580029132.01.T01:CDS |
| TACACTTGGTTAAACCGAGT+GGG | 0.596658 | 5:-92752576 | None:intergenic |
| GTAATCAGGCTTTACGTCAG+GGG | 0.611028 | 5:+92752858 | MsG0580029132.01.T01:intron |
| GGTTAGACTTGAACTTTGCG+CGG | 0.621246 | 5:-92753721 | None:intergenic |
| CCTATCCAACTGCTGGCTGT+AGG | 0.622417 | 5:-92755699 | None:intergenic |
| AGCCACTATCGCTGCATTTG+GGG | 0.627011 | 5:+92753662 | MsG0580029132.01.T01:CDS |
| TGGTACCTACAGCCAGCAGT+TGG | 0.633403 | 5:+92755694 | MsG0580029132.01.T01:three_prime_UTR |
| CCTCTCTTGTTCAGATCGAG+GGG | 0.637714 | 5:+92753558 | MsG0580029132.01.T01:CDS |
| GTACAGTTCTTGGATACAAG+AGG | 0.641528 | 5:+92752880 | MsG0580029132.01.T01:CDS |
| ACACCAAGGAGAAGGTTGCA+TGG | 0.654726 | 5:+92753585 | MsG0580029132.01.T01:CDS |
| CCCCTCGATCTGAACAAGAG+AGG | 0.655801 | 5:-92753558 | None:intergenic |
| ACCAGGCCTCATGGTAACAG+TGG | 0.661908 | 5:+92753692 | MsG0580029132.01.T01:CDS |
| ACGAACACTAACAGAGACAG+AGG | 0.667723 | 5:+92752642 | MsG0580029132.01.T01:CDS |
| ATACACTTGGTTAAACCGAG+TGG | 0.678122 | 5:-92752577 | None:intergenic |
| AAAATGGTTAAAGGACGACA+AGG | 0.679088 | 5:+92752690 | MsG0580029132.01.T01:CDS |
| CTCTCTTGTTCAGATCGAGG+GGG | 0.711001 | 5:+92753559 | MsG0580029132.01.T01:CDS |
| ACAATGCCACTGTTACCATG+AGG | 0.746625 | 5:-92753698 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTAATAATATAATTATT+TGG | - | Chr5:92754037-92754056 | None:intergenic | 0.0% |
| !! | AATTAATAATATAATTATTT+GGG | - | Chr5:92754036-92754055 | None:intergenic | 0.0% |
| !! | TTAAATTGAAATAAAAATCA+TGG | - | Chr5:92754608-92754627 | None:intergenic | 10.0% |
| !!! | ACATAATAAATTAATTTTTC+AGG | - | Chr5:92755157-92755176 | None:intergenic | 10.0% |
| !!! | TAATTAAATCTAATTTGTTT+GGG | + | Chr5:92752996-92753015 | MsG0580029132.01.T01:intron | 10.0% |
| !!! | TAATTTTACCATTTTATTAA+TGG | + | Chr5:92753900-92753919 | MsG0580029132.01.T01:intron | 10.0% |
| !! | AACACAATTAAGTTTAAATA+GGG | - | Chr5:92754303-92754322 | None:intergenic | 15.0% |
| !! | TATTTAAACTTAATTGTGTT+GGG | + | Chr5:92754303-92754322 | MsG0580029132.01.T01:intron | 15.0% |
| !!! | AATTCTTTAAGACATTTAAA+TGG | + | Chr5:92753763-92753782 | MsG0580029132.01.T01:intron | 15.0% |
| !!! | CTAATTAAATCTAATTTGTT+TGG | + | Chr5:92752995-92753014 | MsG0580029132.01.T01:intron | 15.0% |
| !!! | TTTTAACAAAAATTGTTTCT+AGG | + | Chr5:92754779-92754798 | MsG0580029132.01.T01:intron | 15.0% |
| !! | AAATGATTACTGTAAGATTT+GGG | + | Chr5:92753337-92753356 | MsG0580029132.01.T01:intron | 20.0% |
| !! | AAATTACCTTATATATTGCT+TGG | - | Chr5:92753886-92753905 | None:intergenic | 20.0% |
| !! | ATCTTAGAAACTATAAAACT+TGG | - | Chr5:92754408-92754427 | None:intergenic | 20.0% |
| !! | CAACACAATTAAGTTTAAAT+AGG | - | Chr5:92754304-92754323 | None:intergenic | 20.0% |
| !! | CGGAAGAAAAATTATATATT+TGG | - | Chr5:92753413-92753432 | None:intergenic | 20.0% |
| !! | CTATTTAAACTTAATTGTGT+TGG | + | Chr5:92754302-92754321 | MsG0580029132.01.T01:intron | 20.0% |
| !! | GTTAACAACCATTAATAAAA+TGG | - | Chr5:92753911-92753930 | None:intergenic | 20.0% |
| !! | TAAATGATTACTGTAAGATT+TGG | + | Chr5:92753336-92753355 | MsG0580029132.01.T01:intron | 20.0% |
| !! | TGAATCAAAATTCAAAGATT+AGG | - | Chr5:92755657-92755676 | None:intergenic | 20.0% |
| !!! | ACAATCAGTTTTGATTTTTA+TGG | - | Chr5:92754966-92754985 | None:intergenic | 20.0% |
| !!! | ATTTTTATGGAACAGAAATA+AGG | - | Chr5:92754953-92754972 | None:intergenic | 20.0% |
| !!! | TAAAGAATTACCATTGATTT+TGG | - | Chr5:92753752-92753771 | None:intergenic | 20.0% |
| !!! | TTTGGGTATTATTTTTTGTA+TGG | + | Chr5:92753354-92753373 | MsG0580029132.01.T01:intron | 20.0% |
| ! | AACAGAGAATATAAGGTTAA+AGG | - | Chr5:92754924-92754943 | None:intergenic | 25.0% |
| ! | ACAAACACAAATTAAAAGCT+GGG | - | Chr5:92753168-92753187 | None:intergenic | 25.0% |
| ! | ATCAAAATCAAGAACTACTA+GGG | - | Chr5:92753456-92753475 | None:intergenic | 25.0% |
| ! | ATGTATCCAAGCAATATATA+AGG | + | Chr5:92753877-92753896 | MsG0580029132.01.T01:CDS | 25.0% |
| ! | CATTAAAGAAACAATTCACT+TGG | - | Chr5:92755485-92755504 | None:intergenic | 25.0% |
| ! | CTATTTCAACTAAATGAGAA+AGG | - | Chr5:92754571-92754590 | None:intergenic | 25.0% |
| ! | GATTATTTGTGCTAAGAAAT+TGG | + | Chr5:92753495-92753514 | MsG0580029132.01.T01:intron | 25.0% |
| ! | GTACCAATTTATGATCATTA+GGG | + | Chr5:92755504-92755523 | MsG0580029132.01.T01:intron | 25.0% |
| ! | GTTGAGTAATTATAGGTAAT+TGG | - | Chr5:92755967-92755986 | None:intergenic | 25.0% |
| ! | GTTTAACAAAAATTGTTTCC+AGG | + | Chr5:92755038-92755057 | MsG0580029132.01.T01:intron | 25.0% |
| ! | TACTCAACTCAAAAGTAATT+TGG | + | Chr5:92755979-92755998 | MsG0580029132.01.T01:three_prime_UTR | 25.0% |
| ! | TGTACCAATTTATGATCATT+AGG | + | Chr5:92755503-92755522 | MsG0580029132.01.T01:intron | 25.0% |
| ! | TTAAAAACCAAGACTCAATT+TGG | + | Chr5:92753199-92753218 | MsG0580029132.01.T01:intron | 25.0% |
| ! | TTAGATCATTTCTTGTTAGT+TGG | + | Chr5:92755355-92755374 | MsG0580029132.01.T01:intron | 25.0% |
| !! | AATTGGCTTACATTCTTATT+TGG | + | Chr5:92754887-92754906 | MsG0580029132.01.T01:intron | 25.0% |
| !! | AGTTTTTATTCATCCTGTTT+TGG | + | Chr5:92755729-92755748 | MsG0580029132.01.T01:three_prime_UTR | 25.0% |
| !! | ATATTTTATCGAGGATACAT+TGG | - | Chr5:92753246-92753265 | None:intergenic | 25.0% |
| !! | CTTACAAATTTATCTAGTTC+TGG | + | Chr5:92754511-92754530 | MsG0580029132.01.T01:intron | 25.0% |
| !! | GTGCCTAAAAAATTTAAAAC+AGG | - | Chr5:92755383-92755402 | None:intergenic | 25.0% |
| !! | TATTTTATCGAGGATACATT+GGG | - | Chr5:92753245-92753264 | None:intergenic | 25.0% |
| !! | TTGATTTTGTGTTTGTAATC+AGG | + | Chr5:92752844-92752863 | MsG0580029132.01.T01:intron | 25.0% |
| !! | TTGGGTATTATATTTTATCG+AGG | - | Chr5:92753255-92753274 | None:intergenic | 25.0% |
| !!! | AATTTGTAAGCCAGTTTTAT+TGG | - | Chr5:92754501-92754520 | None:intergenic | 25.0% |
| !!! | ACACTTGGTTTAAGATTTTT+AGG | + | Chr5:92753982-92754001 | MsG0580029132.01.T01:intron | 25.0% |
| !!! | ATATACTGATTCCTTACATT+GGG | + | Chr5:92755322-92755341 | MsG0580029132.01.T01:intron | 25.0% |
| !!! | ATGTTTAATGTTGTTTTAGC+TGG | + | Chr5:92753083-92753102 | MsG0580029132.01.T01:intron | 25.0% |
| !!! | ATTTTCATGGTGTATTTTAG+TGG | + | Chr5:92754188-92754207 | MsG0580029132.01.T01:intron | 25.0% |
| !!! | CACTTGGTTTAAGATTTTTA+GGG | + | Chr5:92753983-92754002 | MsG0580029132.01.T01:intron | 25.0% |
| !!! | CTTTTGAGTTGAGTAATTAT+AGG | - | Chr5:92755974-92755993 | None:intergenic | 25.0% |
| !!! | GAAATTGGTAATGTTGTTAT+AGG | + | Chr5:92753510-92753529 | MsG0580029132.01.T01:intron | 25.0% |
| !!! | GTGCCTGTTTTAAATTTTTT+AGG | + | Chr5:92755377-92755396 | MsG0580029132.01.T01:intron | 25.0% |
| !!! | TATATACTGATTCCTTACAT+TGG | + | Chr5:92755321-92755340 | MsG0580029132.01.T01:intron | 25.0% |
| !!! | TTTATGGTTTCTGAAAGTTT+TGG | + | Chr5:92753814-92753833 | MsG0580029132.01.T01:intron | 25.0% |
| !!! | TTTCTAAGATTTTATGTGTG+CGG | + | Chr5:92754418-92754437 | MsG0580029132.01.T01:intron | 25.0% |
| !!! | TTTTCATGGTGTATTTTAGT+GGG | + | Chr5:92754189-92754208 | MsG0580029132.01.T01:intron | 25.0% |
| AAACCTATAATCCCAATGTA+AGG | - | Chr5:92755336-92755355 | None:intergenic | 30.0% | |
| ACACCAATCAAAATGGTTAA+AGG | + | Chr5:92752681-92752700 | MsG0580029132.01.T01:CDS | 30.0% | |
| AGAATGTAAGCCAATTACAT+TGG | - | Chr5:92754883-92754902 | None:intergenic | 30.0% | |
| AGCATCTTAAGACTAATTGA+CGG | + | Chr5:92755440-92755459 | MsG0580029132.01.T01:intron | 30.0% | |
| ATACATAAATACTCTAACCC+TGG | - | Chr5:92753863-92753882 | None:intergenic | 30.0% | |
| ATTCCTTACATTGGGATTAT+AGG | + | Chr5:92755330-92755349 | MsG0580029132.01.T01:intron | 30.0% | |
| CACAAAAGAACAAAATCAAG+AGG | - | Chr5:92755905-92755924 | None:intergenic | 30.0% | |
| CACAAACACAAATTAAAAGC+TGG | - | Chr5:92753169-92753188 | None:intergenic | 30.0% | |
| CATCAAAATCAAGAACTACT+AGG | - | Chr5:92753457-92753476 | None:intergenic | 30.0% | |
| GAAATTGGCATACATTTACA+AGG | + | Chr5:92753619-92753638 | MsG0580029132.01.T01:CDS | 30.0% | |
| GAATTCAACATCCTAGAAAA+AGG | - | Chr5:92755802-92755821 | None:intergenic | 30.0% | |
| GAGAGAAAACAGAGAATATA+AGG | - | Chr5:92754931-92754950 | None:intergenic | 30.0% | |
| GCTGTATTTGATGTATTCTT+GGG | + | Chr5:92752939-92752958 | MsG0580029132.01.T01:intron | 30.0% | |
| GTTAAACGAAATAGATCGAA+GGG | - | Chr5:92752741-92752760 | None:intergenic | 30.0% | |
| TATATGCACAGATAAAATCC+TGG | - | Chr5:92755059-92755078 | None:intergenic | 30.0% | |
| TGCTGTATTTGATGTATTCT+TGG | + | Chr5:92752938-92752957 | MsG0580029132.01.T01:intron | 30.0% | |
| TGTTAAACGAAATAGATCGA+AGG | - | Chr5:92752742-92752761 | None:intergenic | 30.0% | |
| TGTTTAGTCCAAATCTCAAA+TGG | + | Chr5:92755875-92755894 | MsG0580029132.01.T01:three_prime_UTR | 30.0% | |
| TTCAGAAACCATAAAACAGT+TGG | - | Chr5:92753809-92753828 | None:intergenic | 30.0% | |
| ! | AAATTCTAGAGAAGCAGAAA+TGG | - | Chr5:92754111-92754130 | None:intergenic | 30.0% |
| ! | AAATTGCACTTAGTTCTTCT+TGG | + | Chr5:92754699-92754718 | MsG0580029132.01.T01:intron | 30.0% |
| ! | AATATGCTTTTGTGAACACT+TGG | + | Chr5:92753967-92753986 | MsG0580029132.01.T01:intron | 30.0% |
| ! | AATTCTAGAGAAGCAGAAAT+GGG | - | Chr5:92754110-92754129 | None:intergenic | 30.0% |
| ! | ACAGAAGATTTCCTTTTTCT+AGG | + | Chr5:92755788-92755807 | MsG0580029132.01.T01:three_prime_UTR | 30.0% |
| ! | CTTGCTTAATCTTTGCATTT+TGG | + | Chr5:92755580-92755599 | MsG0580029132.01.T01:intron | 30.0% |
| ! | TTCTTTTGCACAAAGATAGA+TGG | + | Chr5:92755215-92755234 | MsG0580029132.01.T01:intron | 30.0% |
| !! | CAAGCAATTTCTAGAATAAG+AGG | - | Chr5:92755564-92755583 | None:intergenic | 30.0% |
| !! | CTTGATTTTGATGTTGATCT+GGG | + | Chr5:92753464-92753483 | MsG0580029132.01.T01:intron | 30.0% |
| !! | GGCTTTTTCTTTGTTGAATA+CGG | + | Chr5:92754273-92754292 | MsG0580029132.01.T01:intron | 30.0% |
| !! | TAAAAGCACTTAGTTCTTCT+TGG | + | Chr5:92754650-92754669 | MsG0580029132.01.T01:intron | 30.0% |
| !! | TAATCTTGTTGTTTGCTTGT+TGG | + | Chr5:92755285-92755304 | MsG0580029132.01.T01:intron | 30.0% |
| !! | TCTTGATTTTGATGTTGATC+TGG | + | Chr5:92753463-92753482 | MsG0580029132.01.T01:intron | 30.0% |
| !! | TTTTGGTTGTCTTTGCATTT+TGG | + | Chr5:92755746-92755765 | MsG0580029132.01.T01:three_prime_UTR | 30.0% |
| !!! | ACAGATTCATTTTGGTTCTA+GGG | - | Chr5:92752608-92752627 | None:intergenic | 30.0% |
| !!! | ACAGTCTGTTTTTTTATCCA+TGG | + | Chr5:92754137-92754156 | MsG0580029132.01.T01:intron | 30.0% |
| !!! | AGAATTACCATTGATTTTGG+TGG | - | Chr5:92753749-92753768 | None:intergenic | 30.0% |
| !!! | CAGTCTGTTTTTTTATCCAT+GGG | + | Chr5:92754138-92754157 | MsG0580029132.01.T01:intron | 30.0% |
| AAAATGGTTAAAGGACGACA+AGG | + | Chr5:92752690-92752709 | MsG0580029132.01.T01:CDS | 35.0% | |
| AATGCAAAGACAACCAAAAC+AGG | - | Chr5:92755745-92755764 | None:intergenic | 35.0% | |
| ACAAAGATAGATGGTGTGAT+TGG | + | Chr5:92755224-92755243 | MsG0580029132.01.T01:intron | 35.0% | |
| CATCTTCACACCAATCAAAA+TGG | + | Chr5:92752674-92752693 | MsG0580029132.01.T01:CDS | 35.0% | |
| CTGATTGTTTGATCTCTTTC+TGG | + | Chr5:92754978-92754997 | MsG0580029132.01.T01:intron | 35.0% | |
| GAGATGTGTTCCAATAAAAC+TGG | + | Chr5:92754488-92754507 | MsG0580029132.01.T01:intron | 35.0% | |
| GCTAACCAATTTACCAAATG+AGG | - | Chr5:92755264-92755283 | None:intergenic | 35.0% | |
| GTAATGTTGTTATAGGTCCA+AGG | + | Chr5:92753517-92753536 | MsG0580029132.01.T01:intron | 35.0% | |
| GTGCCCTAATGATCATAAAT+TGG | - | Chr5:92755510-92755529 | None:intergenic | 35.0% | |
| TAACCTACCACCAAAATCAA+TGG | + | Chr5:92753739-92753758 | MsG0580029132.01.T01:CDS | 35.0% | |
| TGAACTTTCTCCTCTATGTA+TGG | + | Chr5:92754466-92754485 | MsG0580029132.01.T01:intron | 35.0% | |
| TGAAGACACATTATGTACGA+CGG | - | Chr5:92753433-92753452 | None:intergenic | 35.0% | |
| TGACACCTCATTTGGTAAAT+TGG | + | Chr5:92755256-92755275 | MsG0580029132.01.T01:intron | 35.0% | |
| TTGGTCCTTCACAATATTTG+CGG | + | Chr5:92753218-92753237 | MsG0580029132.01.T01:intron | 35.0% | |
| ! | AAATCGCACTTAGTTCTTCT+TGG | + | Chr5:92754747-92754766 | MsG0580029132.01.T01:intron | 35.0% |
| ! | ATACTGCACTTAGTTCTTCT+TGG | + | Chr5:92755008-92755027 | MsG0580029132.01.T01:intron | 35.0% |
| ! | CAACTGCTTGTTAGTATTGT+TGG | + | Chr5:92754252-92754271 | MsG0580029132.01.T01:intron | 35.0% |
| ! | CCTTTTCACCAACTGTTTTA+TGG | + | Chr5:92753798-92753817 | MsG0580029132.01.T01:intron | 35.0% |
| ! | TCATCTTTGCAGATTTTCGT+TGG | + | Chr5:92755674-92755693 | MsG0580029132.01.T01:intron | 35.0% |
| ! | TGAGGCTTCTCTTTTATTCA+TGG | + | Chr5:92755101-92755120 | MsG0580029132.01.T01:intron | 35.0% |
| !! | AGAACTTCAAGTTGATTCAG+TGG | - | Chr5:92754087-92754106 | None:intergenic | 35.0% |
| !! | CCATAAAACAGTTGGTGAAA+AGG | - | Chr5:92753801-92753820 | None:intergenic | 35.0% |
| !! | CGTCCTTTAACCATTTTGAT+TGG | - | Chr5:92752687-92752706 | None:intergenic | 35.0% |
| !! | GTTTGGGTATTGATTTACCT+TGG | - | Chr5:92753537-92753556 | None:intergenic | 35.0% |
| !! | TTCTAGGGTTCTTATACACT+TGG | - | Chr5:92752593-92752612 | None:intergenic | 35.0% |
| !!! | CACAGATTCATTTTGGTTCT+AGG | - | Chr5:92752609-92752628 | None:intergenic | 35.0% |
| !!! | CGAATTTGAGCTAGTTTTCA+TGG | + | Chr5:92752762-92752781 | MsG0580029132.01.T01:intron | 35.0% |
| !!! | TCTGCATTGTGCTATTTTCA+TGG | + | Chr5:92754175-92754194 | MsG0580029132.01.T01:intron | 35.0% |
| !!! | TTACCATTGATTTTGGTGGT+AGG | - | Chr5:92753745-92753764 | None:intergenic | 35.0% |
| AGATTAGGAATGCAGCTTCA+AGG | - | Chr5:92755642-92755661 | None:intergenic | 40.0% | |
| AGGAGAAAGTTCAAGCAGAA+AGG | - | Chr5:92754459-92754478 | None:intergenic | 40.0% | |
| ATACACTTGGTTAAACCGAG+TGG | - | Chr5:92752580-92752599 | None:intergenic | 40.0% | |
| ATGGTATGCTGGGAAGAAAT+TGG | + | Chr5:92753604-92753623 | MsG0580029132.01.T01:CDS | 40.0% | |
| CCTAGACTCATTATCACAAG+CGG | - | Chr5:92753314-92753333 | None:intergenic | 40.0% | |
| CTTGAAACCAAAACCCTAAC+TGG | + | Chr5:92752553-92752572 | MsG0580029132.01.T01:five_prime_UTR | 40.0% | |
| GAACACATCTCCATACATAG+AGG | - | Chr5:92754479-92754498 | None:intergenic | 40.0% | |
| GAGATGTGCTCCAATGTAAT+TGG | + | Chr5:92754870-92754889 | MsG0580029132.01.T01:intron | 40.0% | |
| GGTAGTATCTGTCCTTTCAT+GGG | + | Chr5:92755417-92755436 | MsG0580029132.01.T01:intron | 40.0% | |
| GTACAGTTCTTGGATACAAG+AGG | + | Chr5:92752880-92752899 | MsG0580029132.01.T01:CDS | 40.0% | |
| GTCTCTTGTATCTAAGGAGA+TGG | + | Chr5:92754848-92754867 | MsG0580029132.01.T01:intron | 40.0% | |
| TACACTTGGTTAAACCGAGT+GGG | - | Chr5:92752579-92752598 | None:intergenic | 40.0% | |
| TCTTAAGATGCTCCCATGAA+AGG | - | Chr5:92755432-92755451 | None:intergenic | 40.0% | |
| TCTTGCTTTGACACCTCATT+TGG | + | Chr5:92755248-92755267 | MsG0580029132.01.T01:intron | 40.0% | |
| TGAAGGACCAAATTGAGTCT+TGG | - | Chr5:92753209-92753228 | None:intergenic | 40.0% | |
| TGAGTCGTCTCTTGTATCTA+AGG | + | Chr5:92754842-92754861 | MsG0580029132.01.T01:intron | 40.0% | |
| TGGTAGTATCTGTCCTTTCA+TGG | + | Chr5:92755416-92755435 | MsG0580029132.01.T01:intron | 40.0% | |
| TGGTCCTTCACAATATTTGC+GGG | + | Chr5:92753219-92753238 | MsG0580029132.01.T01:intron | 40.0% | |
| TGTAATCAGGCTTTACGTCA+GGG | + | Chr5:92752857-92752876 | MsG0580029132.01.T01:intron | 40.0% | |
| TGTCTCTGTTAGTGTTCGTT+CGG | - | Chr5:92752641-92752660 | None:intergenic | 40.0% | |
| TTGTAATCAGGCTTTACGTC+AGG | + | Chr5:92752856-92752875 | MsG0580029132.01.T01:intron | 40.0% | |
| ! | GAAGCAGCACAGATTCATTT+TGG | - | Chr5:92752616-92752635 | None:intergenic | 40.0% |
| ! | TAGGCACTCGACATTTTGTT+TGG | + | Chr5:92755396-92755415 | MsG0580029132.01.T01:intron | 40.0% |
| ! | TTCGAGTAAGGAAGTGGATT+GGG | - | Chr5:92754348-92754367 | None:intergenic | 40.0% |
| ! | TTTCGAGTAAGGAAGTGGAT+TGG | - | Chr5:92754349-92754368 | None:intergenic | 40.0% |
| !! | ATCTGAACAAGAGAGGTGTT+TGG | - | Chr5:92753554-92753573 | None:intergenic | 40.0% |
| !! | GATAATGCTGGGACTAGTTT+GGG | - | Chr5:92753273-92753292 | None:intergenic | 40.0% |
| !! | GGTGTTGATTTGTTTGTGCA+GGG | + | Chr5:92753835-92753854 | MsG0580029132.01.T01:intron | 40.0% |
| !! | TCTGAACAAGAGAGGTGTTT+GGG | - | Chr5:92753553-92753572 | None:intergenic | 40.0% |
| !! | TGATAATGCTGGGACTAGTT+TGG | - | Chr5:92753274-92753293 | None:intergenic | 40.0% |
| !! | TGGTGTTGATTTGTTTGTGC+AGG | + | Chr5:92753834-92753853 | MsG0580029132.01.T01:intron | 40.0% |
| !! | TGTTTTCCAGCTTTCGAGTA+AGG | - | Chr5:92754360-92754379 | None:intergenic | 40.0% |
| AAGAGACGACTCAAGCAGAA+AGG | - | Chr5:92754835-92754854 | None:intergenic | 45.0% | |
| AAGCCACTATCGCTGCATTT+GGG | + | Chr5:92753661-92753680 | MsG0580029132.01.T01:CDS | 45.0% | |
| ACAATGCCACTGTTACCATG+AGG | - | Chr5:92753701-92753720 | None:intergenic | 45.0% | |
| ACCTCTCTTGTTCAGATCGA+GGG | + | Chr5:92753557-92753576 | MsG0580029132.01.T01:CDS | 45.0% | |
| ACGAACACTAACAGAGACAG+AGG | + | Chr5:92752642-92752661 | MsG0580029132.01.T01:CDS | 45.0% | |
| ACGGTATTGCACACGTTAAC+TGG | + | Chr5:92755459-92755478 | MsG0580029132.01.T01:intron | 45.0% | |
| AGAAGGTTGCATGGTATGCT+GGG | + | Chr5:92753594-92753613 | MsG0580029132.01.T01:CDS | 45.0% | |
| ATACCATGCAACCTTCTCCT+TGG | - | Chr5:92753591-92753610 | None:intergenic | 45.0% | |
| GAGACAAACTAAGACACCCA+TGG | - | Chr5:92754157-92754176 | None:intergenic | 45.0% | |
| GAGATGTTCTCCAATGTGAC+TGG | + | Chr5:92755123-92755142 | MsG0580029132.01.T01:intron | 45.0% | |
| GGAATGTAAGCCAGTCACAT+TGG | - | Chr5:92755136-92755155 | None:intergenic | 45.0% | |
| GGCATACATTTACAAGGCCA+AGG | + | Chr5:92753625-92753644 | MsG0580029132.01.T01:CDS | 45.0% | |
| GGTTAGACTTGAACTTTGCG+CGG | - | Chr5:92753724-92753743 | None:intergenic | 45.0% | |
| GTAATCAGGCTTTACGTCAG+GGG | + | Chr5:92752858-92752877 | MsG0580029132.01.T01:intron | 45.0% | |
| TCAATGACCTATCCAACTGC+TGG | - | Chr5:92755709-92755728 | None:intergenic | 45.0% | |
| TCCCAGCATTATCACAGTAC+AGG | + | Chr5:92753280-92753299 | MsG0580029132.01.T01:intron | 45.0% | |
| TTACAAGGCCAAGGTGAAGA+AGG | + | Chr5:92753634-92753653 | MsG0580029132.01.T01:CDS | 45.0% | |
| TTGATGTTGATCTGGGTTGC+TGG | + | Chr5:92753471-92753490 | MsG0580029132.01.T01:intron | 45.0% | |
| ! | CCGCTTGTGATAATGAGTCT+AGG | + | Chr5:92753311-92753330 | MsG0580029132.01.T01:intron | 45.0% |
| ! | GAGGAGCTCCATTTGAGATT+TGG | - | Chr5:92755886-92755905 | None:intergenic | 45.0% |
| ! | GCCTGTACTGTGATAATGCT+GGG | - | Chr5:92753284-92753303 | None:intergenic | 45.0% |
| ! | TGCCTGTACTGTGATAATGC+TGG | - | Chr5:92753285-92753304 | None:intergenic | 45.0% |
| AAAACCCTAACTGGCCCACT+CGG | + | Chr5:92752562-92752581 | MsG0580029132.01.T01:five_prime_UTR | 50.0% | |
| AAGAGAAGCCTCAAGCAGAG+AGG | - | Chr5:92755094-92755113 | None:intergenic | 50.0% | |
| AAGGCCAAGGTGAAGAAGGA+TGG | + | Chr5:92753638-92753657 | MsG0580029132.01.T01:CDS | 50.0% | |
| ACACCAAGGAGAAGGTTGCA+TGG | + | Chr5:92753585-92753604 | MsG0580029132.01.T01:CDS | 50.0% | |
| AGCCACTATCGCTGCATTTG+GGG | + | Chr5:92753662-92753681 | MsG0580029132.01.T01:CDS | 50.0% | |
| ATTTGTTTGTGCAGGGAGCC+AGG | + | Chr5:92753842-92753861 | MsG0580029132.01.T01:intron | 50.0% | |
| CACCTCTCTTGTTCAGATCG+AGG | + | Chr5:92753556-92753575 | MsG0580029132.01.T01:CDS | 50.0% | |
| CCACTTCCTTACTCGAAAGC+TGG | + | Chr5:92754351-92754370 | MsG0580029132.01.T01:intron | 50.0% | |
| CCTCTCTTGTTCAGATCGAG+GGG | + | Chr5:92753558-92753577 | MsG0580029132.01.T01:CDS | 50.0% | |
| CTCTCTTGTTCAGATCGAGG+GGG | + | Chr5:92753559-92753578 | MsG0580029132.01.T01:CDS | 50.0% | |
| CTCTGTTAGTGTTCGTTCGG+CGG | - | Chr5:92752638-92752657 | None:intergenic | 50.0% | |
| GAAGCCACTATCGCTGCATT+TGG | + | Chr5:92753660-92753679 | MsG0580029132.01.T01:CDS | 50.0% | |
| GACGACAAGGAGAACGTATC+AGG | + | Chr5:92752703-92752722 | MsG0580029132.01.T01:CDS | 50.0% | |
| GAGAAGGTTGCATGGTATGC+TGG | + | Chr5:92753593-92753612 | MsG0580029132.01.T01:CDS | 50.0% | |
| GCGTAAAACCTCTCTGCTTG+AGG | + | Chr5:92755083-92755102 | MsG0580029132.01.T01:intron | 50.0% | |
| GCTTCCATCCTTCTTCACCT+TGG | - | Chr5:92753645-92753664 | None:intergenic | 50.0% | |
| TAAACCGAGTGGGCCAGTTA+GGG | - | Chr5:92752569-92752588 | None:intergenic | 50.0% | |
| TACCCCAAATGCAGCGATAG+TGG | - | Chr5:92753667-92753686 | None:intergenic | 50.0% | |
| TGGGCCCGCAAATATTGTGA+AGG | - | Chr5:92753226-92753245 | None:intergenic | 50.0% | |
| TTAAACCGAGTGGGCCAGTT+AGG | - | Chr5:92752570-92752589 | None:intergenic | 50.0% | |
| TTTGTTTGTGCAGGGAGCCA+GGG | + | Chr5:92753843-92753862 | MsG0580029132.01.T01:intron | 50.0% | |
| ! | CCAGCTTTCGAGTAAGGAAG+TGG | - | Chr5:92754354-92754373 | None:intergenic | 50.0% |
| ! | CTATCGCTGCATTTGGGGTA+AGG | + | Chr5:92753667-92753686 | MsG0580029132.01.T01:CDS | 50.0% |
| ! | GCATTTGGGGTAAGGTTACC+AGG | + | Chr5:92753675-92753694 | MsG0580029132.01.T01:CDS | 50.0% |
| ! | TACGTCAGGGGTACAGTTCT+TGG | + | Chr5:92752870-92752889 | MsG0580029132.01.T01:CDS | 50.0% |
| !! | AGGAAGTGGATTGGGTGGAA+AGG | - | Chr5:92754340-92754359 | None:intergenic | 50.0% |
| !! | GAGTAAGGAAGTGGATTGGG+TGG | - | Chr5:92754345-92754364 | None:intergenic | 50.0% |
| ACCAGGCCTCATGGTAACAG+TGG | + | Chr5:92753692-92753711 | MsG0580029132.01.T01:CDS | 55.0% | |
| CCCCTCGATCTGAACAAGAG+AGG | - | Chr5:92753561-92753580 | None:intergenic | 55.0% | |
| CCTACAGCCAGCAGTTGGAT+AGG | + | Chr5:92755699-92755718 | MsG0580029132.01.T01:three_prime_UTR | 55.0% | |
| GATCGAGGGGGTAAACACCA+AGG | + | Chr5:92753571-92753590 | MsG0580029132.01.T01:CDS | 55.0% | |
| GGGGGTAAACACCAAGGAGA+AGG | + | Chr5:92753577-92753596 | MsG0580029132.01.T01:CDS | 55.0% | |
| GGTAAGGTTACCAGGCCTCA+TGG | + | Chr5:92753683-92753702 | MsG0580029132.01.T01:CDS | 55.0% | |
| TGGTACCTACAGCCAGCAGT+TGG | + | Chr5:92755694-92755713 | MsG0580029132.01.T01:three_prime_UTR | 55.0% | |
| ! | CCTATCCAACTGCTGGCTGT+AGG | - | Chr5:92755702-92755721 | None:intergenic | 55.0% |
| ! | GAGTGGGCCAGTTAGGGTTT+TGG | - | Chr5:92752563-92752582 | None:intergenic | 55.0% |
| GCCACTGTTACCATGAGGCC+TGG | - | Chr5:92753696-92753715 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 92752545 | 92755999 | 92752545 | ID=MsG0580029132.01;Name=MsG0580029132.01 |
| Chr5 | mRNA | 92752545 | 92755999 | 92752545 | ID=MsG0580029132.01.T01;Parent=MsG0580029132.01;Name=MsG0580029132.01.T01;_AED=0.38;_eAED=0.38;_QI=73|1|1|1|0.75|0.6|5|315|137 |
| Chr5 | exon | 92752545 | 92752724 | 92752545 | ID=MsG0580029132.01.T01:exon:26501;Parent=MsG0580029132.01.T01 |
| Chr5 | exon | 92752866 | 92752901 | 92752866 | ID=MsG0580029132.01.T01:exon:26502;Parent=MsG0580029132.01.T01 |
| Chr5 | exon | 92753532 | 92753760 | 92753532 | ID=MsG0580029132.01.T01:exon:26503;Parent=MsG0580029132.01.T01 |
| Chr5 | exon | 92753856 | 92753898 | 92753856 | ID=MsG0580029132.01.T01:exon:26504;Parent=MsG0580029132.01.T01 |
| Chr5 | exon | 92755686 | 92755999 | 92755686 | ID=MsG0580029132.01.T01:exon:26505;Parent=MsG0580029132.01.T01 |
| Chr5 | five_prime_UTR | 92752545 | 92752617 | 92752545 | ID=MsG0580029132.01.T01:five_prime_utr;Parent=MsG0580029132.01.T01 |
| Chr5 | CDS | 92752618 | 92752724 | 92752618 | ID=MsG0580029132.01.T01:cds;Parent=MsG0580029132.01.T01 |
| Chr5 | CDS | 92752866 | 92752901 | 92752866 | ID=MsG0580029132.01.T01:cds;Parent=MsG0580029132.01.T01 |
| Chr5 | CDS | 92753532 | 92753760 | 92753532 | ID=MsG0580029132.01.T01:cds;Parent=MsG0580029132.01.T01 |
| Chr5 | CDS | 92753856 | 92753897 | 92753856 | ID=MsG0580029132.01.T01:cds;Parent=MsG0580029132.01.T01 |
| Chr5 | three_prime_UTR | 92753898 | 92753898 | 92753898 | ID=MsG0580029132.01.T01:three_prime_utr;Parent=MsG0580029132.01.T01 |
| Chr5 | three_prime_UTR | 92755686 | 92755999 | 92755686 | ID=MsG0580029132.01.T01:three_prime_utr;Parent=MsG0580029132.01.T01 |
| Gene Sequence |
| Protein sequence |
