AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280011387.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011387.01.T01 MTR_2g103560 88.796 357 16 1 1 357 1 333 0.0 645
MsG0280011387.01.T01 MTR_4g079190 60.388 361 59 7 1 356 1 282 1.11e-122 355
MsG0280011387.01.T01 MTR_1g048860 93.289 149 10 0 151 299 2 150 6.70e-74 226
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011387.01.T01 AT1G23280 53.008 266 67 4 1 264 1 210 3.67e-80 247

Find 84 sgRNAs with CRISPR-Local

Find 332 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCTCAATCCTACTTTGTT+TGG 0.214228 2:+83374349 MsG0280011387.01.T01:three_prime_UTR
GAAGATGACATGGAAGATTT+TGG 0.235599 2:+83372518 MsG0280011387.01.T01:CDS
AATCCGCATCTGGGTCATTT+TGG 0.284801 2:-83370303 None:intergenic
ATCTCAATCCTACTTTGTTT+GGG 0.295308 2:+83374350 MsG0280011387.01.T01:three_prime_UTR
CAAATTCCAGTGACATTGTA+AGG 0.318003 2:-83369498 None:intergenic
GCAAATTGAGATGGAGATAG+TGG 0.342543 2:+83372222 MsG0280011387.01.T01:intron
TTCTGCATTAACAGATGTAT+TGG 0.350434 2:+83370243 MsG0280011387.01.T01:intron
AATGATGCCGATCATGAAAA+TGG 0.350819 2:+83372569 MsG0280011387.01.T01:CDS
TATGTGGATCATCAGGATTT+TGG 0.355454 2:+83374398 MsG0280011387.01.T01:three_prime_UTR
TCCTCATACGAATCCGCATC+TGG 0.358008 2:-83370313 None:intergenic
CTGGTTGCGAACCTACATTT+TGG 0.361173 2:-83372252 None:intergenic
TCTCTCTTTGTCTCTTTCCT+TGG 0.372921 2:-83371890 None:intergenic
GAAGTTGCTATATGAGAAAC+TGG 0.383694 2:+83374178 MsG0280011387.01.T01:three_prime_UTR
ATCTTGTGTACGAGAAGCTT+TGG 0.393893 2:-83370266 None:intergenic
TGCAGCACGATGAGGTTATA+TGG 0.401960 2:+83368722 MsG0280011387.01.T01:CDS
GCAGAAGTAGAATATGTAGA+AGG 0.404197 2:+83372479 MsG0280011387.01.T01:CDS
GAATGACAATGTAGCTTTGT+TGG 0.407111 2:+83374310 MsG0280011387.01.T01:three_prime_UTR
GTACTATAAAGTTCTTGATA+TGG 0.407319 2:+83372303 MsG0280011387.01.T01:CDS
CAGCATAAACTCCTTCTTCA+AGG 0.415044 2:-83372070 None:intergenic
ACTCTTTCCCACAAATCCTT+TGG 0.416287 2:-83370087 None:intergenic
GTAAAATAAATTGACATAAA+CGG 0.432572 2:-83374275 None:intergenic
TAGCTAAAGGGCAAGAGCTT+CGG 0.455266 2:-83369524 None:intergenic
CTCATACGCCAAAGGATTTG+TGG 0.458884 2:+83370079 MsG0280011387.01.T01:CDS
TCTTCATCCTCTTCATCAGC+AGG 0.463201 2:-83372337 None:intergenic
ATTGTCTGTTGGTTACTGAT+AGG 0.466499 2:+83374150 MsG0280011387.01.T01:three_prime_UTR
TTTCAATAGTCTTCATGTAA+AGG 0.467452 2:-83370053 None:intergenic
TGCTTACGAAAGACAAAGAT+TGG 0.476293 2:+83374115 MsG0280011387.01.T01:CDS
AGCTTCAAAGAAACTTGAAA+AGG 0.479994 2:+83373480 MsG0280011387.01.T01:CDS
AAAGTAGGATTGAGATGCTC+TGG 0.480020 2:-83374343 None:intergenic
AGGAATTACGAACAGGCACT+TGG 0.500734 2:+83370120 MsG0280011387.01.T01:CDS
CCCAGATGCGGATTCGTATG+AGG 0.505873 2:+83370312 MsG0280011387.01.T01:CDS
ACAATTGCAATGTCTGTTGT+AGG 0.508401 2:+83370021 MsG0280011387.01.T01:CDS
CTAACTAAACGCCTTGAAGA+AGG 0.509150 2:+83372059 MsG0280011387.01.T01:CDS
TGGAGTCATCGACAAACATC+TGG 0.509833 2:+83370140 MsG0280011387.01.T01:CDS
GTTTGCAATTCATGAGTCAC+AGG 0.511321 2:+83372544 MsG0280011387.01.T01:CDS
GGAAACTTGCTTTGAAAACA+AGG 0.511440 2:+83370333 MsG0280011387.01.T01:CDS
TTTCTTTGATTTAGTATCAA+GGG 0.513045 2:-83373506 None:intergenic
ACAGTAGTTACATTGTCTGT+TGG 0.515660 2:+83374139 MsG0280011387.01.T01:exon
CATAGCGACTATTAGCTAAA+GGG 0.516684 2:-83369536 None:intergenic
GCATAGCGACTATTAGCTAA+AGG 0.516741 2:-83369537 None:intergenic
AGTGGAGATTCAGACTGATA+AGG 0.526528 2:+83372115 MsG0280011387.01.T01:CDS
AGTGCCTGTTCGTAATTCCT+AGG 0.526835 2:-83370117 None:intergenic
AAGAGAAGTGCGTACTGAAG+TGG 0.528805 2:+83372097 MsG0280011387.01.T01:CDS
TCATACGCCAAAGGATTTGT+GGG 0.528939 2:+83370080 MsG0280011387.01.T01:CDS
GCTTCAACCTGCTGATGAAG+AGG 0.533182 2:+83372330 MsG0280011387.01.T01:CDS
ACTTTATAGTACGCTTCAGT+AGG 0.533622 2:-83372292 None:intergenic
ACCTTTGTCTTCACGAATGG+TGG 0.540955 2:-83369559 None:intergenic
AGAAACCCTTACAATGTCAC+TGG 0.541886 2:+83369492 MsG0280011387.01.T01:intron
CAAAATGTAGGTTCGCAACC+AGG 0.546579 2:+83372253 MsG0280011387.01.T01:CDS
GGGAAAGAGTTAAGCTGCCT+AGG 0.548712 2:+83370100 MsG0280011387.01.T01:CDS
GCTGCCTAGGAATTACGAAC+AGG 0.552927 2:+83370113 MsG0280011387.01.T01:CDS
CCTCATACGAATCCGCATCT+GGG 0.557645 2:-83370312 None:intergenic
TGCTGATGAAGAGGATGAAG+AGG 0.563447 2:+83372339 MsG0280011387.01.T01:CDS
AGAATCTAGAAGAGAAGCAA+AGG 0.564109 2:+83371910 MsG0280011387.01.T01:CDS
TCACGATCCCCAAACAAAGT+AGG 0.565053 2:-83374358 None:intergenic
AGTACCTTTGTCTTCACGAA+TGG 0.571730 2:-83369562 None:intergenic
TGAGTGGAAAATGTAATAAG+TGG 0.572142 2:+83369967 MsG0280011387.01.T01:intron
GTAATCAGAGGAAAGCCAAA+AGG 0.573419 2:+83373446 MsG0280011387.01.T01:CDS
AGAAGGTTATGAACTTGAAG+AGG 0.575452 2:+83372496 MsG0280011387.01.T01:CDS
GTGGGACGCCTCCAAAATGT+AGG 0.582304 2:+83372241 MsG0280011387.01.T01:CDS
ATTGTCATTCTTCCAAACAA+AGG 0.584351 2:-83374297 None:intergenic
AAATTCCAGTGACATTGTAA+GGG 0.584410 2:-83369497 None:intergenic
CTTCAAATTAGTTTGTACCC+TGG 0.586065 2:+83374217 MsG0280011387.01.T01:three_prime_UTR
TCTCAATCCTACTTTGTTTG+GGG 0.587567 2:+83374351 MsG0280011387.01.T01:three_prime_UTR
AAGTGTAGAATTGATATACT+TGG 0.587597 2:-83368779 None:intergenic
GAAAACGAAGGTCCTCATTG+AGG 0.590120 2:+83373525 MsG0280011387.01.T01:CDS
TAATACTTAGCAAATTGAGA+TGG 0.596304 2:+83372213 MsG0280011387.01.T01:intron
ACTTGAAGAGGAAGATGACA+TGG 0.603621 2:+83372508 MsG0280011387.01.T01:CDS
CAAATTGAGATGGAGATAGT+GGG 0.613797 2:+83372223 MsG0280011387.01.T01:CDS
GGATAGTTGAATATTTCACC+TGG 0.619836 2:-83372271 None:intergenic
AACAAATAATAACACTACCA+AGG 0.623666 2:+83371873 MsG0280011387.01.T01:CDS
AAACTGAAGCACGTAATCAG+AGG 0.629054 2:+83373434 MsG0280011387.01.T01:CDS
TCCAAAGATGCAGCACGATG+AGG 0.633592 2:+83368714 None:intergenic
TGAAAGAGCTCATACGCCAA+AGG 0.633610 2:+83370071 MsG0280011387.01.T01:CDS
TGTTGGTTACTGATAGGAGA+GGG 0.635016 2:+83374156 MsG0280011387.01.T01:three_prime_UTR
AGAAGCAAAGGCTCAAACAG+CGG 0.638277 2:+83371922 MsG0280011387.01.T01:CDS
AGTATTAAATTACCTCAATG+AGG 0.639733 2:-83373537 None:intergenic
AACAGCGGCTGCTATAGAGA+AGG 0.646322 2:+83371937 MsG0280011387.01.T01:CDS
CTGTTGGTTACTGATAGGAG+AGG 0.655019 2:+83374155 MsG0280011387.01.T01:three_prime_UTR
TGACCAAAATGACCCAGATG+CGG 0.657520 2:+83370300 MsG0280011387.01.T01:CDS
ATGATGCATAGCTCACCGCT+AGG 0.658867 2:-83374460 None:intergenic
GCCACCATTCGTGAAGACAA+AGG 0.662439 2:+83369558 MsG0280011387.01.T01:CDS
TTTGCAATTCATGAGTCACA+GGG 0.672082 2:+83372545 MsG0280011387.01.T01:CDS
TACTAAATCAAAGAAAACGA+AGG 0.700083 2:+83373513 MsG0280011387.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGGAAATAAAAATATAAAAA+AGG - Chr2:83370497-83370516 None:intergenic 10.0%
!! ATGAAATTTAATTAAAATAC+TGG - Chr2:83371577-83371596 None:intergenic 10.0%
!! TATTATATTTACATAGTTTA+GGG + Chr2:83369348-83369367 MsG0280011387.01.T01:intron 10.0%
!! TTATTATATTTACATAGTTT+AGG + Chr2:83369347-83369366 MsG0280011387.01.T01:intron 10.0%
!!! ACAAATGTTATTTAAAATAT+TGG - Chr2:83370924-83370943 None:intergenic 10.0%
!!! ATTTATTTAAAATCAGTAAT+AGG - Chr2:83373742-83373761 None:intergenic 10.0%
!!! CAAATGTTATTTAAAATATT+GGG - Chr2:83370923-83370942 None:intergenic 10.0%
!!! CTATATGAAAATATTTTATA+CGG + Chr2:83370565-83370584 MsG0280011387.01.T01:intron 10.0%
!!! TATATGAAAATATTTTATAC+GGG + Chr2:83370566-83370585 MsG0280011387.01.T01:intron 10.0%
!! AAAAAAAATCAATCAGATAT+AGG - Chr2:83371079-83371098 None:intergenic 15.0%
!! AAATCATATACAGATATATT+TGG - Chr2:83371702-83371721 None:intergenic 15.0%
!! AACATATAATTTAATATGCA+TGG - Chr2:83371984-83372003 None:intergenic 15.0%
!! AATATAATAAGTAATTCCTA+AGG - Chr2:83369337-83369356 None:intergenic 15.0%
!! AATCATATACAGATATATTT+GGG - Chr2:83371701-83371720 None:intergenic 15.0%
!! GTAAAATAAATTGACATAAA+CGG - Chr2:83374278-83374297 None:intergenic 15.0%
!! GTACATTTATAATAGTATTA+GGG - Chr2:83371727-83371746 None:intergenic 15.0%
!! TATTGTATTTAAATAGTGTA+AGG - Chr2:83368872-83368891 None:intergenic 15.0%
!! TGTACATTTATAATAGTATT+AGG - Chr2:83371728-83371747 None:intergenic 15.0%
!! TTTAAATTATTAGTGAAAAC+AGG - Chr2:83370517-83370536 None:intergenic 15.0%
!!! AAATTATTCTAATTTGAAAC+AGG - Chr2:83368807-83368826 None:intergenic 15.0%
!!! AATATTTTTTAAGAGTGTTT+GGG - Chr2:83371337-83371356 None:intergenic 15.0%
!!! AATTATTCTAATTTGAAACA+GGG - Chr2:83368806-83368825 None:intergenic 15.0%
!!! CGTATAAAATATTTTCATAT+AGG - Chr2:83370567-83370586 None:intergenic 15.0%
!!! TAATATTTTTTAAGAGTGTT+TGG - Chr2:83371338-83371357 None:intergenic 15.0%
!!! TATTTTCATATAGGAAAAAA+AGG - Chr2:83370558-83370577 None:intergenic 15.0%
!!! TTGATTTTTGTTATCATTTT+TGG + Chr2:83370730-83370749 MsG0280011387.01.T01:intron 15.0%
!!! TTTTAAATAACATTTGTACT+AGG + Chr2:83370927-83370946 MsG0280011387.01.T01:intron 15.0%
!! AAAAAAATGGAAAAGAAAAG+AGG - Chr2:83369440-83369459 None:intergenic 20.0%
!! AAATTAAATAATATGCAGCT+TGG - Chr2:83370433-83370452 None:intergenic 20.0%
!! AACATATAATTTAACATGTG+TGG - Chr2:83372163-83372182 None:intergenic 20.0%
!! AAGCAATTCAAATGATAAAA+AGG + Chr2:83373220-83373239 MsG0280011387.01.T01:intron 20.0%
!! AAGTAATCAAAATTTGAACT+TGG - Chr2:83369749-83369768 None:intergenic 20.0%
!! AATTCACCCTAAAATTAAAT+GGG - Chr2:83371547-83371566 None:intergenic 20.0%
!! ACATATAATTTAACATGTGT+GGG - Chr2:83372162-83372181 None:intergenic 20.0%
!! AGTAATCAAAATTTGAACTT+GGG - Chr2:83369748-83369767 None:intergenic 20.0%
!! AGTCATGATATTAGTATATA+TGG + Chr2:83371230-83371249 MsG0280011387.01.T01:intron 20.0%
!! ATCAAAATTAATATCCAACA+GGG - Chr2:83369878-83369897 None:intergenic 20.0%
!! CTGATAAGTAATTTAAATGA+AGG + Chr2:83371002-83371021 MsG0280011387.01.T01:intron 20.0%
!! GATAAAGAAAAGTTTGTAAA+AGG + Chr2:83372777-83372796 MsG0280011387.01.T01:intron 20.0%
!! GATTCCTAAATAAACAAATA+TGG - Chr2:83371152-83371171 None:intergenic 20.0%
!! TAATTCACCCTAAAATTAAA+TGG - Chr2:83371548-83371567 None:intergenic 20.0%
!! TATAATTACATCTAACAAGT+GGG - Chr2:83370873-83370892 None:intergenic 20.0%
!! TATCAAAATTAATATCCAAC+AGG - Chr2:83369879-83369898 None:intergenic 20.0%
!! TCAATAACAAGTATAAAAGA+TGG - Chr2:83370608-83370627 None:intergenic 20.0%
!! TCAGAAAGAAAAAAAAACAA+AGG - Chr2:83371464-83371483 None:intergenic 20.0%
!! TGTACCATATTTGTTTATTT+AGG + Chr2:83371145-83371164 MsG0280011387.01.T01:intron 20.0%
!! TTATTGAACATGAAAAAAGT+GGG + Chr2:83370621-83370640 MsG0280011387.01.T01:intron 20.0%
!! TTTAATTAAAATACTGGACA+AGG - Chr2:83371571-83371590 None:intergenic 20.0%
!! TTTAATTCAAATACTTGACA+AGG - Chr2:83371408-83371427 None:intergenic 20.0%
!!! AACATTTTTTCAATTCAGTT+TGG + Chr2:83370833-83370852 MsG0280011387.01.T01:intron 20.0%
!!! ACATTTTTTCAATTCAGTTT+GGG + Chr2:83370834-83370853 MsG0280011387.01.T01:intron 20.0%
!!! AGTTTTTTGTAGTTTATACA+AGG - Chr2:83373567-83373586 None:intergenic 20.0%
!!! ATTATTTAATTTCTGCATGT+TGG + Chr2:83370441-83370460 MsG0280011387.01.T01:intron 20.0%
!!! CAATTTATTTTACCTTTGTT+TGG + Chr2:83374285-83374304 MsG0280011387.01.T01:three_prime_UTR 20.0%
!!! TGAATGATTTTATATACCTT+AGG + Chr2:83369318-83369337 MsG0280011387.01.T01:intron 20.0%
!!! TGATCAAATTTTGTTTTATG+TGG + Chr2:83374382-83374401 MsG0280011387.01.T01:three_prime_UTR 20.0%
!!! TGTGAATGTTATGATTTTAT+TGG + Chr2:83371596-83371615 MsG0280011387.01.T01:intron 20.0%
!!! TTTCTTTGATTTAGTATCAA+GGG - Chr2:83373509-83373528 None:intergenic 20.0%
!!! TTTTCTTTGATTTAGTATCA+AGG - Chr2:83373510-83373529 None:intergenic 20.0%
!!! TTTTTCTTTTCAAATTGAAC+AGG + Chr2:83372454-83372473 MsG0280011387.01.T01:intron 20.0%
! AAAAGTAGACAAAAATATGC+AGG - Chr2:83371125-83371144 None:intergenic 25.0%
! AAAATCAAGATTGTGATATC+AGG - Chr2:83374069-83374088 None:intergenic 25.0%
! AAATAAATGATGCTACAAAC+TGG + Chr2:83373754-83373773 MsG0280011387.01.T01:intron 25.0%
! AAATGTTAAATCCCCTAAAA+TGG - Chr2:83370820-83370839 None:intergenic 25.0%
! AACAAATAATAACACTACCA+AGG + Chr2:83371873-83371892 MsG0280011387.01.T01:CDS 25.0%
! AAGTGTAGAATTGATATACT+TGG - Chr2:83368782-83368801 None:intergenic 25.0%
! AATACATCAAGCAAAAGAAA+GGG - Chr2:83373905-83373924 None:intergenic 25.0%
! AATATTCAAAAGCAACAATG+AGG - Chr2:83372018-83372037 None:intergenic 25.0%
! AATCAATCAGATATAGGAAA+AGG - Chr2:83371073-83371092 None:intergenic 25.0%
! AATTTCGTTACTTGTAATAG+TGG + Chr2:83371185-83371204 MsG0280011387.01.T01:intron 25.0%
! AGTATTAAATTACCTCAATG+AGG - Chr2:83373540-83373559 None:intergenic 25.0%
! AGTGTTCTGTTATAATTTGA+AGG + Chr2:83373714-83373733 MsG0280011387.01.T01:intron 25.0%
! AGTTCATCCTAAAATTAGAT+GGG - Chr2:83371384-83371403 None:intergenic 25.0%
! ATCAATCAGATATAGGAAAA+GGG - Chr2:83371072-83371091 None:intergenic 25.0%
! ATTATTCAAAAGCAACAATG+AGG - Chr2:83372197-83372216 None:intergenic 25.0%
! ATTCACCCTAAAATTAAATG+GGG - Chr2:83371546-83371565 None:intergenic 25.0%
! ATTCTACGAACACAAAAAAA+TGG - Chr2:83369453-83369472 None:intergenic 25.0%
! GAAAAAAAGGTAAAGCAATA+TGG - Chr2:83370545-83370564 None:intergenic 25.0%
! GTACTATAAAGTTCTTGATA+TGG + Chr2:83372303-83372322 MsG0280011387.01.T01:CDS 25.0%
! GTATAATTACATCTAACAAG+TGG - Chr2:83370874-83370893 None:intergenic 25.0%
! GTTATTGAACATGAAAAAAG+TGG + Chr2:83370620-83370639 MsG0280011387.01.T01:intron 25.0%
! GTTCTGATAAACAACTTATT+TGG + Chr2:83368956-83368975 MsG0280011387.01.T01:intron 25.0%
! TAATACTTAGCAAATTGAGA+TGG + Chr2:83372213-83372232 MsG0280011387.01.T01:intron 25.0%
! TACTAAATCAAAGAAAACGA+AGG + Chr2:83373513-83373532 MsG0280011387.01.T01:CDS 25.0%
! TAGTTCATCCTAAAATTAGA+TGG - Chr2:83371385-83371404 None:intergenic 25.0%
! TATTGAACATGAAAAAAGTG+GGG + Chr2:83370622-83370641 MsG0280011387.01.T01:intron 25.0%
! TGATAACAAAAATCAAACAG+CGG - Chr2:83370726-83370745 None:intergenic 25.0%
! TTAATATGCATGGTAACATT+AGG - Chr2:83371974-83371993 None:intergenic 25.0%
! TTAGATTTCAGCTAGAAATT+AGG + Chr2:83369612-83369631 MsG0280011387.01.T01:intron 25.0%
! TTGAAAATATGACAAGTAAC+TGG - Chr2:83373100-83373119 None:intergenic 25.0%
! TTTCAATAGTCTTCATGTAA+AGG - Chr2:83370056-83370075 None:intergenic 25.0%
!! AAGTTTATGGACTAAATTGA+TGG + Chr2:83369391-83369410 MsG0280011387.01.T01:intron 25.0%
!! AATGTTACCATTTTCATGAT+CGG - Chr2:83372579-83372598 None:intergenic 25.0%
!! ACATAATATACGTTTTCCAA+TGG + Chr2:83372742-83372761 MsG0280011387.01.T01:intron 25.0%
!! GTGTTAAAACATCCATTTTA+GGG + Chr2:83370805-83370824 MsG0280011387.01.T01:intron 25.0%
!! TAATTCATTTTACTCTGTTG+TGG + Chr2:83372373-83372392 MsG0280011387.01.T01:intron 25.0%
!! TATGAGTGTTACGATTTTAT+AGG + Chr2:83371431-83371450 MsG0280011387.01.T01:intron 25.0%
!! TCTTGATTTTCATTGTTTTC+AGG + Chr2:83374079-83374098 MsG0280011387.01.T01:intron 25.0%
!! TGTAAAAGGTCTTATACTTA+GGG + Chr2:83372791-83372810 MsG0280011387.01.T01:intron 25.0%
!! TGTTAAAACATCCATTTTAG+GGG + Chr2:83370806-83370825 MsG0280011387.01.T01:intron 25.0%
!! TTGTAAAAGGTCTTATACTT+AGG + Chr2:83372790-83372809 MsG0280011387.01.T01:intron 25.0%
!!! ACTCATGATTTTTGTTTGAA+TGG - Chr2:83372632-83372651 None:intergenic 25.0%
!!! CTGTTCTTTTAATTGCTATT+GGG + Chr2:83373589-83373608 MsG0280011387.01.T01:intron 25.0%
!!! GTTGCTTTTGAATATTACTT+AGG + Chr2:83372022-83372041 MsG0280011387.01.T01:intron 25.0%
!!! TAAAATGGATGTTTTAACAC+CGG - Chr2:83370805-83370824 None:intergenic 25.0%
!!! TCATGAGTATTGAGAAAAAT+AGG + Chr2:83372644-83372663 MsG0280011387.01.T01:intron 25.0%
!!! TCTGTTCTTTTAATTGCTAT+TGG + Chr2:83373588-83373607 MsG0280011387.01.T01:intron 25.0%
!!! TTTCACCCCATTTAATTTTA+GGG + Chr2:83371538-83371557 MsG0280011387.01.T01:intron 25.0%
!!! TTTTCACCCCATTTAATTTT+AGG + Chr2:83371537-83371556 MsG0280011387.01.T01:intron 25.0%
AAAAGAAAGGGAAGTCATAA+GGG - Chr2:83373893-83373912 None:intergenic 30.0%
AAAATATGACAAGTAACTGG+AGG - Chr2:83373097-83373116 None:intergenic 30.0%
AAATTCCAGTGACATTGTAA+GGG - Chr2:83369500-83369519 None:intergenic 30.0%
AAGGTCTGGTAATATACATT+TGG - Chr2:83373265-83373284 None:intergenic 30.0%
AAGTTCTTAGAGACTTAACT+TGG + Chr2:83372411-83372430 MsG0280011387.01.T01:intron 30.0%
ACAACTCAACCATTTCTTTA+GGG + Chr2:83373652-83373671 MsG0280011387.01.T01:intron 30.0%
ACACTGACAACTGTATATAT+AGG - Chr2:83373699-83373718 None:intergenic 30.0%
ACATAGTTTAGGGACTAAAT+TGG + Chr2:83369358-83369377 MsG0280011387.01.T01:intron 30.0%
ACCTAAAAGATAGTAGATCA+AGG - Chr2:83371773-83371792 None:intergenic 30.0%
AGCTTCAAAGAAACTTGAAA+AGG + Chr2:83373480-83373499 MsG0280011387.01.T01:CDS 30.0%
AGGTCTGGTAATATACATTT+GGG - Chr2:83373264-83373283 None:intergenic 30.0%
AGTATGTGTAACAGTGAAAT+AGG + Chr2:83372871-83372890 MsG0280011387.01.T01:intron 30.0%
ATACATCTGTTAATGCAGAA+AGG - Chr2:83370243-83370262 None:intergenic 30.0%
ATACTACAAACAGATCCTTT+AGG - Chr2:83371268-83371287 None:intergenic 30.0%
ATTGTCATTCTTCCAAACAA+AGG - Chr2:83374300-83374319 None:intergenic 30.0%
CAATACATCAAGCAAAAGAA+AGG - Chr2:83373906-83373925 None:intergenic 30.0%
CATATTTATGATCTCACAGT+GGG + Chr2:83371494-83371513 MsG0280011387.01.T01:intron 30.0%
CTACAATCAATTACTCATGA+GGG - Chr2:83370673-83370692 None:intergenic 30.0%
GAAATTTACGATCTCACATT+CGG + Chr2:83371665-83371684 MsG0280011387.01.T01:intron 30.0%
GATAAGCTGAAAACAATCTA+CGG + Chr2:83369174-83369193 MsG0280011387.01.T01:intron 30.0%
GCATAATCTGTTACAACTTT+CGG - Chr2:83373967-83373986 None:intergenic 30.0%
GGTATTATCATCCTTAAATC+CGG + Chr2:83370783-83370802 MsG0280011387.01.T01:intron 30.0%
GTAGTATATTGAATCATCCT+GGG + Chr2:83371281-83371300 MsG0280011387.01.T01:intron 30.0%
GTTCAGAATACTTTGTATCT+TGG - Chr2:83372960-83372979 None:intergenic 30.0%
GTTCATCCTAAAATTAGATG+GGG - Chr2:83371383-83371402 None:intergenic 30.0%
TAAATGGGGTGAAAATGATT+TGG - Chr2:83371532-83371551 None:intergenic 30.0%
TAACATTTGTACTAGGCATT+TGG + Chr2:83370934-83370953 MsG0280011387.01.T01:intron 30.0%
TAAGAAATGCCTAAAACCTT+AGG + Chr2:83374036-83374055 MsG0280011387.01.T01:intron 30.0%
TAAGTTGTTTATCAGAACAG+AGG - Chr2:83368954-83368973 None:intergenic 30.0%
TATATTTGTATCCTTGTGAG+TGG + Chr2:83369951-83369970 MsG0280011387.01.T01:intron 30.0%
TATTCTGAACAAGATACACA+TGG + Chr2:83372970-83372989 MsG0280011387.01.T01:intron 30.0%
TCTTCACTCATCAAGTAATT+TGG + Chr2:83372918-83372937 MsG0280011387.01.T01:intron 30.0%
TGAGTGGAAAATGTAATAAG+TGG + Chr2:83369967-83369986 MsG0280011387.01.T01:intron 30.0%
TGGAATAATAAGACTCCTAA+AGG + Chr2:83371250-83371269 MsG0280011387.01.T01:intron 30.0%
TGTAGTATATTGAATCATCC+TGG + Chr2:83371280-83371299 MsG0280011387.01.T01:intron 30.0%
TTCTGCATTAACAGATGTAT+TGG + Chr2:83370243-83370262 MsG0280011387.01.T01:intron 30.0%
TTGGGTGAATATTAAAAGTG+AGG - Chr2:83370905-83370924 None:intergenic 30.0%
! AACACAAAAAGATGTTTTGC+TGG + Chr2:83370762-83370781 MsG0280011387.01.T01:intron 30.0%
! ATCTCAATCCTACTTTGTTT+GGG + Chr2:83374350-83374369 MsG0280011387.01.T01:three_prime_UTR 30.0%
! CTTGATGTATTGCATAGTTT+TGG + Chr2:83373914-83373933 MsG0280011387.01.T01:intron 30.0%
! GAAGGATTTGCTTAATCAAA+GGG + Chr2:83371020-83371039 MsG0280011387.01.T01:intron 30.0%
! GGTGTTAAAACATCCATTTT+AGG + Chr2:83370804-83370823 MsG0280011387.01.T01:intron 30.0%
! TATTACATTTTCCACTCACA+AGG - Chr2:83369965-83369984 None:intergenic 30.0%
! TCCTTGATCTACTATCTTTT+AGG + Chr2:83371769-83371788 MsG0280011387.01.T01:intron 30.0%
! TGAAGGATTTGCTTAATCAA+AGG + Chr2:83371019-83371038 MsG0280011387.01.T01:intron 30.0%
! TTTCCAATGGTACTCTAAAA+GGG + Chr2:83372755-83372774 MsG0280011387.01.T01:intron 30.0%
! TTTTCACCCCATCTAATTTT+AGG + Chr2:83371374-83371393 MsG0280011387.01.T01:intron 30.0%
! TTTTCCAATGGTACTCTAAA+AGG + Chr2:83372754-83372773 MsG0280011387.01.T01:intron 30.0%
!! ACACTTTGCTGTAATTTTGT+GGG + Chr2:83373990-83374009 MsG0280011387.01.T01:intron 30.0%
!! AGCTAAAGTCATTTTCCTTT+TGG - Chr2:83373464-83373483 None:intergenic 30.0%
!! ATAAGTTTTGTGAGACTGTT+TGG - Chr2:83369224-83369243 None:intergenic 30.0%
!! CATGATTTTTGTTTGAATGG+AGG - Chr2:83372629-83372648 None:intergenic 30.0%
!! TGATTTTCATTGTTTTCAGG+TGG + Chr2:83374082-83374101 MsG0280011387.01.T01:intron 30.0%
!!! ATGTTGGTATGTTGTTTTAC+AGG + Chr2:83371849-83371868 MsG0280011387.01.T01:intron 30.0%
!!! ATGTTTTAACACCGGATTTA+AGG - Chr2:83370797-83370816 None:intergenic 30.0%
!!! TGTTGGTATGTTGTTTTACA+GGG + Chr2:83371850-83371869 MsG0280011387.01.T01:intron 30.0%
!!! TTCAGATCTTTTTTCTTCCA+GGG - Chr2:83374237-83374256 None:intergenic 30.0%
!!! TTTCAGATCTTTTTTCTTCC+AGG - Chr2:83374238-83374257 None:intergenic 30.0%
!!! TTTGTTTTATGTGGATCATC+AGG + Chr2:83374391-83374410 MsG0280011387.01.T01:three_prime_UTR 30.0%
AAGCTTCTTGCAGAATGATA+AGG - Chr2:83370396-83370415 None:intergenic 35.0%
AATGATGCCGATCATGAAAA+TGG + Chr2:83372569-83372588 MsG0280011387.01.T01:CDS 35.0%
ACAAGATACACATGGTATGA+TGG + Chr2:83372978-83372997 MsG0280011387.01.T01:intron 35.0%
ACAATTGCAATGTCTGTTGT+AGG + Chr2:83370021-83370040 MsG0280011387.01.T01:CDS 35.0%
ACAGTAGTTACATTGTCTGT+TGG + Chr2:83374139-83374158 MsG0280011387.01.T01:exon 35.0%
ACATACCAACATGATCAAAC+AGG - Chr2:83371841-83371860 None:intergenic 35.0%
ACTGTTGAGATAGATGATGT+TGG + Chr2:83373793-83373812 MsG0280011387.01.T01:intron 35.0%
ACTTTATAGTACGCTTCAGT+AGG - Chr2:83372295-83372314 None:intergenic 35.0%
AGAAGGTTATGAACTTGAAG+AGG + Chr2:83372496-83372515 MsG0280011387.01.T01:CDS 35.0%
AGAATAGAAAGATCTGACTG+CGG - Chr2:83373136-83373155 None:intergenic 35.0%
AGAATCTAGAAGAGAAGCAA+AGG + Chr2:83371910-83371929 MsG0280011387.01.T01:CDS 35.0%
ATTCAAAGGAGTTAGAGAAG+AGG + Chr2:83369720-83369739 MsG0280011387.01.T01:intron 35.0%
CAAAAGAAAGGGAAGTCATA+AGG - Chr2:83373894-83373913 None:intergenic 35.0%
CAAAATTACAGCAAAGTGTG+TGG - Chr2:83373989-83374008 None:intergenic 35.0%
CAAATTCCAGTGACATTGTA+AGG - Chr2:83369501-83369520 None:intergenic 35.0%
CAAATTGAGATGGAGATAGT+GGG + Chr2:83372223-83372242 MsG0280011387.01.T01:CDS 35.0%
CAAGATTGTGATATCAGGTT+TGG - Chr2:83374064-83374083 None:intergenic 35.0%
CATAGCGACTATTAGCTAAA+GGG - Chr2:83369539-83369558 None:intergenic 35.0%
CATCTCAATCCTACTTTGTT+TGG + Chr2:83374349-83374368 MsG0280011387.01.T01:three_prime_UTR 35.0%
CCACTGTGAGATCATAAATA+TGG - Chr2:83371496-83371515 None:intergenic 35.0%
CCATATTTATGATCTCACAG+TGG + Chr2:83371493-83371512 MsG0280011387.01.T01:intron 35.0%
CCTACAATCAATTACTCATG+AGG - Chr2:83370674-83370693 None:intergenic 35.0%
CCTCATGAGTAATTGATTGT+AGG + Chr2:83370671-83370690 MsG0280011387.01.T01:intron 35.0%
GAAGTTGCTATATGAGAAAC+TGG + Chr2:83374178-83374197 MsG0280011387.01.T01:three_prime_UTR 35.0%
GACAACTCAACCATTTCTTT+AGG + Chr2:83373651-83373670 MsG0280011387.01.T01:intron 35.0%
GAGAAGAAAAGGACATATTG+AGG + Chr2:83369852-83369871 MsG0280011387.01.T01:intron 35.0%
GAGGTTCTTATAATAAGCGA+CGG - Chr2:83372610-83372629 None:intergenic 35.0%
GCAGAAGTAGAATATGTAGA+AGG + Chr2:83372479-83372498 MsG0280011387.01.T01:CDS 35.0%
GGATAGTTGAATATTTCACC+TGG - Chr2:83372274-83372293 None:intergenic 35.0%
GGTCTGGTAATATACATTTG+GGG - Chr2:83373263-83373282 None:intergenic 35.0%
GTCTGGTAATATACATTTGG+GGG - Chr2:83373262-83373281 None:intergenic 35.0%
GTTATCTTGAAGAACTTGTG+AGG + Chr2:83369152-83369171 MsG0280011387.01.T01:intron 35.0%
TAACATGTGTGGGTAACATT+AGG - Chr2:83372152-83372171 None:intergenic 35.0%
TAGAAGCTTTGCAATATGCA+TGG + Chr2:83372829-83372848 MsG0280011387.01.T01:intron 35.0%
TAGATGGGGTGAAAATGATT+TGG - Chr2:83371369-83371388 None:intergenic 35.0%
TCAAATAAGCCAATCCAAAG+AGG + Chr2:83369258-83369277 MsG0280011387.01.T01:intron 35.0%
TCTGGTAATATACATTTGGG+GGG - Chr2:83373261-83373280 None:intergenic 35.0%
TCTGTTAATGCAGAAAGGTA+AGG - Chr2:83370238-83370257 None:intergenic 35.0%
TGACATAGAGACCAAAAACA+TGG - Chr2:83369676-83369695 None:intergenic 35.0%
TGCTTACGAAAGACAAAGAT+TGG + Chr2:83374115-83374134 MsG0280011387.01.T01:CDS 35.0%
TGGAGAGAATGTGAAGTTTA+TGG + Chr2:83369378-83369397 MsG0280011387.01.T01:intron 35.0%
TTCAAAGGAGTTAGAGAAGA+GGG + Chr2:83369721-83369740 MsG0280011387.01.T01:intron 35.0%
TTCTTATAATAAGCGACGGA+GGG - Chr2:83372606-83372625 None:intergenic 35.0%
TTGTGGTCAACATACAAAAC+TGG - Chr2:83373863-83373882 None:intergenic 35.0%
TTGTGTTCGTAGAATTACGA+CGG + Chr2:83369458-83369477 MsG0280011387.01.T01:intron 35.0%
TTTGCAATTCATGAGTCACA+GGG + Chr2:83372545-83372564 MsG0280011387.01.T01:CDS 35.0%
! AATATGTCCTTTTCTTCTCG+TGG - Chr2:83369851-83369870 None:intergenic 35.0%
! ACCATTTCTTTAGGGAACTT+TGG + Chr2:83373660-83373679 MsG0280011387.01.T01:intron 35.0%
! ATATGTCCTTTTCTTCTCGT+GGG - Chr2:83369850-83369869 None:intergenic 35.0%
! ATTGTCTGTTGGTTACTGAT+AGG + Chr2:83374150-83374169 MsG0280011387.01.T01:three_prime_UTR 35.0%
! CCATTTCTTTAGGGAACTTT+GGG + Chr2:83373661-83373680 MsG0280011387.01.T01:intron 35.0%
! GAAGATGACATGGAAGATTT+TGG + Chr2:83372518-83372537 MsG0280011387.01.T01:CDS 35.0%
! TATGTGGATCATCAGGATTT+TGG + Chr2:83374398-83374417 MsG0280011387.01.T01:three_prime_UTR 35.0%
! TCTCAATCCTACTTTGTTTG+GGG + Chr2:83374351-83374370 MsG0280011387.01.T01:three_prime_UTR 35.0%
! TGAAGGAAACTCCATGTTTT+TGG + Chr2:83369662-83369681 MsG0280011387.01.T01:intron 35.0%
!! AACTTGGTAATGTTGACTCT+GGG + Chr2:83372427-83372446 MsG0280011387.01.T01:intron 35.0%
!! ATGTTTTATTGCACACCTAG+CGG + Chr2:83374445-83374464 MsG0280011387.01.T01:three_prime_UTR 35.0%
!! CACACTTTGCTGTAATTTTG+TGG + Chr2:83373989-83374008 MsG0280011387.01.T01:intron 35.0%
!! CTTCAAATTAGTTTGTACCC+TGG + Chr2:83374217-83374236 MsG0280011387.01.T01:three_prime_UTR 35.0%
!! GAATGACAATGTAGCTTTGT+TGG + Chr2:83374310-83374329 MsG0280011387.01.T01:three_prime_UTR 35.0%
!! GGAAACTTGCTTTGAAAACA+AGG + Chr2:83370333-83370352 MsG0280011387.01.T01:CDS 35.0%
!! TAACTTGGTAATGTTGACTC+TGG + Chr2:83372426-83372445 MsG0280011387.01.T01:intron 35.0%
!!! TATCCCTTTTAGAGTACCAT+TGG - Chr2:83372761-83372780 None:intergenic 35.0%
!!! TGCATAGTTTTGGTTTTGTC+TGG + Chr2:83373924-83373943 MsG0280011387.01.T01:intron 35.0%
AAACTGAAGCACGTAATCAG+AGG + Chr2:83373434-83373453 MsG0280011387.01.T01:CDS 40.0%
AAAGGGAAGTCATAAGGGAT+TGG - Chr2:83373888-83373907 None:intergenic 40.0%
AAAGTAGGATTGAGATGCTC+TGG - Chr2:83374346-83374365 None:intergenic 40.0%
AATATACATTTGGGGGGTAG+AGG - Chr2:83373255-83373274 None:intergenic 40.0%
ACATCTAACAAGTGGGAGAA+CGG - Chr2:83370866-83370885 None:intergenic 40.0%
ACCCTAGCGTCTTAATAGTA+GGG + Chr2:83369288-83369307 MsG0280011387.01.T01:intron 40.0%
ACTACATCAGTACACTGCTT+TGG - Chr2:83371213-83371232 None:intergenic 40.0%
ACTCTTTCCCACAAATCCTT+TGG - Chr2:83370090-83370109 None:intergenic 40.0%
ACTTGAAGAGGAAGATGACA+TGG + Chr2:83372508-83372527 MsG0280011387.01.T01:CDS 40.0%
AGAAACCCTTACAATGTCAC+TGG + Chr2:83369492-83369511 MsG0280011387.01.T01:intron 40.0%
AGACAAAAATATGCAGGAGC+AGG - Chr2:83371119-83371138 None:intergenic 40.0%
AGTACCTTTGTCTTCACGAA+TGG - Chr2:83369565-83369584 None:intergenic 40.0%
AGTGGAGATTCAGACTGATA+AGG + Chr2:83372115-83372134 MsG0280011387.01.T01:CDS 40.0%
AGTTGAGCTCAGACATTCAA+AGG + Chr2:83369706-83369725 MsG0280011387.01.T01:intron 40.0%
ATATACATTTGGGGGGTAGA+GGG - Chr2:83373254-83373273 None:intergenic 40.0%
ATCTTGTGTACGAGAAGCTT+TGG - Chr2:83370269-83370288 None:intergenic 40.0%
CAATTACTCATGAGGGTTTG+AGG - Chr2:83370666-83370685 None:intergenic 40.0%
CAGAACAGAGGCTAAATCAA+TGG - Chr2:83368942-83368961 None:intergenic 40.0%
CAGCATAAACTCCTTCTTCA+AGG - Chr2:83372073-83372092 None:intergenic 40.0%
CCCAAAGTTCCCTAAAGAAA+TGG - Chr2:83373664-83373683 None:intergenic 40.0%
CTAACTAAACGCCTTGAAGA+AGG + Chr2:83372059-83372078 MsG0280011387.01.T01:CDS 40.0%
CTACATCAGTACACTGCTTT+GGG - Chr2:83371212-83371231 None:intergenic 40.0%
GAAATGCTTGTGTGATGTGA+AGG + Chr2:83369645-83369664 MsG0280011387.01.T01:intron 40.0%
GCAAATTGAGATGGAGATAG+TGG + Chr2:83372222-83372241 MsG0280011387.01.T01:intron 40.0%
GCATAGCGACTATTAGCTAA+AGG - Chr2:83369540-83369559 None:intergenic 40.0%
GTAATCAGAGGAAAGCCAAA+AGG + Chr2:83373446-83373465 MsG0280011387.01.T01:CDS 40.0%
GTCTAATAGCCTCTTTGGAT+TGG - Chr2:83369270-83369289 None:intergenic 40.0%
GTCTTATACTTAGGGACAGA+GGG + Chr2:83372799-83372818 MsG0280011387.01.T01:intron 40.0%
GTTCTTATAATAAGCGACGG+AGG - Chr2:83372607-83372626 None:intergenic 40.0%
GTTTGCAATTCATGAGTCAC+AGG + Chr2:83372544-83372563 MsG0280011387.01.T01:CDS 40.0%
TCATACGCCAAAGGATTTGT+GGG + Chr2:83370080-83370099 MsG0280011387.01.T01:CDS 40.0%
TCCCTACTATTAAGACGCTA+GGG - Chr2:83369292-83369311 None:intergenic 40.0%
TCTCTCTTTGTCTCTTTCCT+TGG - Chr2:83371893-83371912 None:intergenic 40.0%
TGAACATGAAAAAAGTGGGG+TGG + Chr2:83370625-83370644 MsG0280011387.01.T01:intron 40.0%
TGACTTCTCTTTCATTGAGC+TGG + Chr2:83373015-83373034 MsG0280011387.01.T01:intron 40.0%
TGGTCAACATACAAAACTGG+AGG - Chr2:83373860-83373879 None:intergenic 40.0%
TGTGTTCGTAGAATTACGAC+GGG + Chr2:83369459-83369478 MsG0280011387.01.T01:intron 40.0%
TTCTCTTTCATTGAGCTGGT+GGG + Chr2:83373019-83373038 MsG0280011387.01.T01:intron 40.0%
TTGACATCTACTAATGCAGC+TGG + Chr2:83373394-83373413 MsG0280011387.01.T01:intron 40.0%
TTGGGAGTTGAGATAGAAAG+AGG - Chr2:83371319-83371338 None:intergenic 40.0%
! ATGGGGTGAAAATGATTTGG+TGG - Chr2:83371366-83371385 None:intergenic 40.0%
! GATATCAGGTTTGGAACCTA+AGG - Chr2:83374055-83374074 None:intergenic 40.0%
! TGTTGGTTACTGATAGGAGA+GGG + Chr2:83374156-83374175 MsG0280011387.01.T01:three_prime_UTR 40.0%
!! GAGGTGAAAGTTTGGTTCTT+TGG + Chr2:83369820-83369839 MsG0280011387.01.T01:intron 40.0%
!! GGTTTGGAACCTAAGGTTTT+AGG - Chr2:83374048-83374067 None:intergenic 40.0%
!!! GATCAAACAGGCTGCTTTTA+TGG - Chr2:83371829-83371848 None:intergenic 40.0%
ACCTTTGTCTTCACGAATGG+TGG - Chr2:83369562-83369581 None:intergenic 45.0%
AGAAGCAAAGGCTCAAACAG+CGG + Chr2:83371922-83371941 MsG0280011387.01.T01:CDS 45.0%
AGCAGCCTGTTTGATCATGT+TGG + Chr2:83371833-83371852 MsG0280011387.01.T01:intron 45.0%
AGGAATTACGAACAGGCACT+TGG + Chr2:83370120-83370139 MsG0280011387.01.T01:CDS 45.0%
AGTGCCTGTTCGTAATTCCT+AGG - Chr2:83370120-83370139 None:intergenic 45.0%
CAAAATGTAGGTTCGCAACC+AGG + Chr2:83372253-83372272 MsG0280011387.01.T01:CDS 45.0%
CTAGGGTCTAATAGCCTCTT+TGG - Chr2:83369275-83369294 None:intergenic 45.0%
CTCATACGCCAAAGGATTTG+TGG + Chr2:83370079-83370098 MsG0280011387.01.T01:CDS 45.0%
CTTCTCTTTCATTGAGCTGG+TGG + Chr2:83373018-83373037 MsG0280011387.01.T01:intron 45.0%
GAAAACGAAGGTCCTCATTG+AGG + Chr2:83373525-83373544 MsG0280011387.01.T01:CDS 45.0%
GACCCTAGCGTCTTAATAGT+AGG + Chr2:83369287-83369306 MsG0280011387.01.T01:intron 45.0%
GTCCCTACTATTAAGACGCT+AGG - Chr2:83369293-83369312 None:intergenic 45.0%
GTGTTCGTAGAATTACGACG+GGG + Chr2:83369460-83369479 MsG0280011387.01.T01:intron 45.0%
TAGCTAAAGGGCAAGAGCTT+CGG - Chr2:83369527-83369546 None:intergenic 45.0%
TATACATTTGGGGGGTAGAG+GGG - Chr2:83373253-83373272 None:intergenic 45.0%
TCACGATCCCCAAACAAAGT+AGG - Chr2:83374361-83374380 None:intergenic 45.0%
TCTTCATCCTCTTCATCAGC+AGG - Chr2:83372340-83372359 None:intergenic 45.0%
TGAAAGAGCTCATACGCCAA+AGG + Chr2:83370071-83370090 MsG0280011387.01.T01:CDS 45.0%
TGACCAAAATGACCCAGATG+CGG + Chr2:83370300-83370319 MsG0280011387.01.T01:CDS 45.0%
TGCAGAAAGCAGCACTCTAA+AGG - Chr2:83373284-83373303 None:intergenic 45.0%
TGCAGCACGATGAGGTTATA+TGG + Chr2:83368722-83368741 MsG0280011387.01.T01:CDS 45.0%
TGCTGATGAAGAGGATGAAG+AGG + Chr2:83372339-83372358 MsG0280011387.01.T01:CDS 45.0%
TGGAGTCATCGACAAACATC+TGG + Chr2:83370140-83370159 MsG0280011387.01.T01:CDS 45.0%
! AAAGCAGCACTCTAAAGGTC+TGG - Chr2:83373279-83373298 None:intergenic 45.0%
! AAGAGAAGTGCGTACTGAAG+TGG + Chr2:83372097-83372116 MsG0280011387.01.T01:CDS 45.0%
! AATCCGCATCTGGGTCATTT+TGG - Chr2:83370306-83370325 None:intergenic 45.0%
! ACTCATGAGGGTTTGAGGTT+AGG - Chr2:83370661-83370680 None:intergenic 45.0%
! AGAGGCATGCTTAAAAACCC+AGG - Chr2:83371301-83371320 None:intergenic 45.0%
! CTGGTTGCGAACCTACATTT+TGG - Chr2:83372255-83372274 None:intergenic 45.0%
! CTGTTGGTTACTGATAGGAG+AGG + Chr2:83374155-83374174 MsG0280011387.01.T01:three_prime_UTR 45.0%
! GGTCTTATACTTAGGGACAG+AGG + Chr2:83372798-83372817 MsG0280011387.01.T01:intron 45.0%
! GTTGCGAACCTACATTTTGG+AGG - Chr2:83372252-83372271 None:intergenic 45.0%
! TGCATACTTTTCCTGAGCTG+AGG + Chr2:83369801-83369820 MsG0280011387.01.T01:intron 45.0%
!! GTCATAAGGGATTGGCTTTG+TGG - Chr2:83373880-83373899 None:intergenic 45.0%
!! TTAGAGTGCTGCTTTCTGCA+TGG + Chr2:83373284-83373303 MsG0280011387.01.T01:intron 45.0%
!! AAATATAAAATTATTACATA+AGG - Chr2:83369938-83369957 None:intergenic 5.0%
AACAGCGGCTGCTATAGAGA+AGG + Chr2:83371937-83371956 MsG0280011387.01.T01:CDS 50.0%
AGGACATATTGAGGCCCTGT+TGG + Chr2:83369861-83369880 MsG0280011387.01.T01:intron 50.0%
ATGATGCATAGCTCACCGCT+AGG - Chr2:83374463-83374482 None:intergenic 50.0%
CCAAACTTTCACCTCAGCTC+AGG - Chr2:83369815-83369834 None:intergenic 50.0%
CCTCATACGAATCCGCATCT+GGG - Chr2:83370315-83370334 None:intergenic 50.0%
CCTGAGCTGAGGTGAAAGTT+TGG + Chr2:83369812-83369831 MsG0280011387.01.T01:intron 50.0%
CTGCTTTCTGCATGGCTAAC+GGG + Chr2:83373292-83373311 MsG0280011387.01.T01:intron 50.0%
GCCACCATTCGTGAAGACAA+AGG + Chr2:83369558-83369577 MsG0280011387.01.T01:CDS 50.0%
GCTGCCTAGGAATTACGAAC+AGG + Chr2:83370113-83370132 MsG0280011387.01.T01:CDS 50.0%
GCTTCAACCTGCTGATGAAG+AGG + Chr2:83372330-83372349 MsG0280011387.01.T01:CDS 50.0%
GGAGAACCCACGAGAAGAAA+AGG + Chr2:83369841-83369860 MsG0280011387.01.T01:intron 50.0%
GGGAAAGAGTTAAGCTGCCT+AGG + Chr2:83370100-83370119 MsG0280011387.01.T01:CDS 50.0%
TCCTCATACGAATCCGCATC+TGG - Chr2:83370316-83370335 None:intergenic 50.0%
TGCAGGAGCAGGATAGACTA+TGG - Chr2:83371108-83371127 None:intergenic 50.0%
! GCTGCTTTCTGCATGGCTAA+CGG + Chr2:83373291-83373310 MsG0280011387.01.T01:intron 50.0%
CCCAGATGCGGATTCGTATG+AGG + Chr2:83370312-83370331 MsG0280011387.01.T01:CDS 55.0%
GTGGGACGCCTCCAAAATGT+AGG + Chr2:83372241-83372260 MsG0280011387.01.T01:CDS 55.0%
! TCTGCATGGCTAACGGGCAA+TGG + Chr2:83373298-83373317 MsG0280011387.01.T01:intron 55.0%
Chromosome Type Strat End Strand Name
Chr2 gene 83368721 83374499 83368721 ID=MsG0280011387.01;Name=MsG0280011387.01
Chr2 mRNA 83368721 83374499 83368721 ID=MsG0280011387.01.T01;Parent=MsG0280011387.01;Name=MsG0280011387.01.T01;_AED=0.38;_eAED=0.42;_QI=0|0.77|0.7|1|0.77|0.7|10|354|357
Chr2 exon 83374101 83374499 83374101 ID=MsG0280011387.01.T01:exon:18896;Parent=MsG0280011387.01.T01
Chr2 exon 83373413 83373546 83373413 ID=MsG0280011387.01.T01:exon:18895;Parent=MsG0280011387.01.T01
Chr2 exon 83372476 83372590 83372476 ID=MsG0280011387.01.T01:exon:18894;Parent=MsG0280011387.01.T01
Chr2 exon 83372223 83372360 83372223 ID=MsG0280011387.01.T01:exon:18893;Parent=MsG0280011387.01.T01
Chr2 exon 83372044 83372136 83372044 ID=MsG0280011387.01.T01:exon:18892;Parent=MsG0280011387.01.T01
Chr2 exon 83371871 83371958 83371871 ID=MsG0280011387.01.T01:exon:18891;Parent=MsG0280011387.01.T01
Chr2 exon 83370257 83370354 83370257 ID=MsG0280011387.01.T01:exon:18890;Parent=MsG0280011387.01.T01
Chr2 exon 83369971 83370161 83369971 ID=MsG0280011387.01.T01:exon:18889;Parent=MsG0280011387.01.T01
Chr2 exon 83369494 83369579 83369494 ID=MsG0280011387.01.T01:exon:18888;Parent=MsG0280011387.01.T01
Chr2 exon 83368721 83368806 83368721 ID=MsG0280011387.01.T01:exon:18887;Parent=MsG0280011387.01.T01
Chr2 CDS 83368721 83368806 83368721 ID=MsG0280011387.01.T01:cds;Parent=MsG0280011387.01.T01
Chr2 CDS 83369494 83369579 83369494 ID=MsG0280011387.01.T01:cds;Parent=MsG0280011387.01.T01
Chr2 CDS 83369971 83370161 83369971 ID=MsG0280011387.01.T01:cds;Parent=MsG0280011387.01.T01
Chr2 CDS 83370257 83370354 83370257 ID=MsG0280011387.01.T01:cds;Parent=MsG0280011387.01.T01
Chr2 CDS 83371871 83371958 83371871 ID=MsG0280011387.01.T01:cds;Parent=MsG0280011387.01.T01
Chr2 CDS 83372044 83372136 83372044 ID=MsG0280011387.01.T01:cds;Parent=MsG0280011387.01.T01
Chr2 CDS 83372223 83372360 83372223 ID=MsG0280011387.01.T01:cds;Parent=MsG0280011387.01.T01
Chr2 CDS 83372476 83372590 83372476 ID=MsG0280011387.01.T01:cds;Parent=MsG0280011387.01.T01
Chr2 CDS 83373413 83373546 83373413 ID=MsG0280011387.01.T01:cds;Parent=MsG0280011387.01.T01
Chr2 CDS 83374101 83374145 83374101 ID=MsG0280011387.01.T01:cds;Parent=MsG0280011387.01.T01
Chr2 three_prime_UTR 83374146 83374499 83374146 ID=MsG0280011387.01.T01:three_prime_utr;Parent=MsG0280011387.01.T01
Gene Sequence

>MsG0280011387.01.T01

ATGCAGCACGATGAGGTTATATGGCAAGTTATCAGACACAATCATTGCAGTTTCATGACCAAGTATATCAATTCTACACTTTCCCTAAACCCTTACAATGTCACTGGAATTTGTAACCGAAGCTCTTGCCCTTTAGCTAATAGTCGCTATGCCACCATTCGTGAAGACAAAGTGGAAAATGTAATAAGTGGAGAATTTGTGATAAAGAATGCAAGCAATGATACAATTGCAATGTCTGTTGTAGGAGTTTTTTACCTTTACATGAAGACTATTGAAAGAGCTCATACGCCAAAGGATTTGTGGGAAAGAGTTAAGCTGCCTAGGAATTACGAACAGGCACTTGGAGTCATCGACAAACATCTGATGTATTGGCCAAAGCTTCTCGTACACAAGATAAAACAACGATTGACCAAAATGACCCAGATGCGGATTCGTATGAGGAAACTTGCTTTGAAAACAAGGGAACAAATAATAACACTACCAAGGAAAGAGACAAAGAGAGAATCTAGAAGAGAAGCAAAGGCTCAAACAGCGGCTGCTATAGAGAAGGCTATTGAGCATGAGCTAACTAAACGCCTTGAAGAAGGAGTTTATGCTGATAAAAGAGAAGTGCGTACTGAAGTGGAGATTCAGACTGATAAGCAAATTGAGATGGAGATAGTGGGACGCCTCCAAAATGTAGGTTCGCAACCAGGTGAAATATTCAACTATCCTACTGAAGCGTACTATAAAGTTCTTGATATGGAGAAGCTTCAACCTGCTGATGAAGAGGATGAAGAGGAAGCAGAAGTAGAATATGTAGAAGGTTATGAACTTGAAGAGGAAGATGACATGGAAGATTTTGGTGCGTTTGCAATTCATGAGTCACAGGGCAATGATGCCGATCATGAAAATGCTGGAAGCAGTGAAGACGAAGAAACTGAAGCACGTAATCAGAGGAAAGCCAAAAGGAAAATGACTTTAGCTTCAAAGAAACTTGAAAAGGATGCCCTTGATACTAAATCAAAGAAAACGAAGGTCCTCATTGAGGTGGAACACGACGATGCTTACGAAAGACAAAGATTGGTACAGTAG

Protein sequence

>MsG0280011387.01.T01

MQHDEVIWQVIRHNHCSFMTKYINSTLSLNPYNVTGICNRSSCPLANSRYATIREDKVENVISGEFVIKNASNDTIAMSVVGVFYLYMKTIERAHTPKDLWERVKLPRNYEQALGVIDKHLMYWPKLLVHKIKQRLTKMTQMRIRMRKLALKTREQIITLPRKETKRESRREAKAQTAAAIEKAIEHELTKRLEEGVYADKREVRTEVEIQTDKQIEMEIVGRLQNVGSQPGEIFNYPTEAYYKVLDMEKLQPADEEDEEEAEVEYVEGYELEEEDDMEDFGAFAIHESQGNDADHENAGSSEDEETEARNQRKAKRKMTLASKKLEKDALDTKSKKTKVLIEVEHDDAYERQRLVQ*