Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010650.01.T01 | XP_003597084.1 | 97.02 | 302 | 9 | 0 | 1 | 302 | 1 | 302 | 0 | 610 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010650.01.T01 | Q9ZR04 | 45.397 | 315 | 139 | 10 | 1 | 301 | 1 | 296 | 1.49E-76 | 238 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010650.01.T01 | G7IRM6 | 97.020 | 302 | 9 | 0 | 1 | 302 | 1 | 302 | 0.0 | 610 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048291.01 | MsG0280010650.01 | 0.800455 | 1.429770e-48 | 6.660142e-46 |
| MsG0080048856.01 | MsG0280010650.01 | 0.816661 | 4.930234e-52 | 3.514887e-49 |
| MsG0180000145.01 | MsG0280010650.01 | 0.803186 | 3.931931e-49 | 1.963117e-46 |
| MsG0180000983.01 | MsG0280010650.01 | 0.800148 | 1.650795e-48 | 7.630145e-46 |
| MsG0180001892.01 | MsG0280010650.01 | 0.825520 | 4.482178e-54 | 4.094876e-51 |
| MsG0180003361.01 | MsG0280010650.01 | 0.806655 | 7.404473e-50 | 4.041019e-47 |
| MsG0180003455.01 | MsG0280010650.01 | 0.822548 | 2.232957e-53 | 1.875001e-50 |
| MsG0180003786.01 | MsG0280010650.01 | 0.800364 | 1.492310e-48 | 6.935693e-46 |
| MsG0180003920.01 | MsG0280010650.01 | 0.802661 | 5.047418e-49 | 2.486454e-46 |
| MsG0180003943.01 | MsG0280010650.01 | 0.822294 | 2.558679e-53 | 2.132905e-50 |
| MsG0180003951.01 | MsG0280010650.01 | 0.828856 | 7.123631e-55 | 7.166393e-52 |
| MsG0180004049.01 | MsG0280010650.01 | 0.807574 | 4.729717e-50 | 2.643578e-47 |
| MsG0180004099.01 | MsG0280010650.01 | 0.814086 | 1.842945e-51 | 1.224828e-48 |
| MsG0180004143.01 | MsG0280010650.01 | 0.805125 | 1.552689e-49 | 8.148874e-47 |
| MsG0180004707.01 | MsG0280010650.01 | 0.814746 | 1.316823e-51 | 8.909322e-49 |
| MsG0180004754.01 | MsG0280010650.01 | 0.802167 | 6.379902e-49 | 3.103672e-46 |
| MsG0180004970.01 | MsG0280010650.01 | 0.832117 | 1.134815e-55 | 1.256347e-52 |
| MsG0180006000.01 | MsG0280010650.01 | 0.847766 | 9.393578e-60 | 1.687083e-56 |
| MsG0280010650.01 | MsG0280010779.01 | 0.824187 | 9.245299e-54 | 8.130719e-51 |
| MsG0280010650.01 | MsG0280011014.01 | 0.801387 | 9.221314e-49 | 4.398141e-46 |
| MsG0280010650.01 | MsG0280011258.01 | 0.855545 | 5.869723e-62 | 1.359934e-58 |
| MsG0280010650.01 | MsG0280011282.01 | 0.832200 | 1.082650e-55 | 1.201540e-52 |
| MsG0280010650.01 | MsG0280011341.01 | 0.849765 | 2.620329e-60 | 5.020706e-57 |
| MsG0280010650.01 | MsG0280011416.01 | 0.800903 | 1.158508e-48 | 5.458634e-46 |
| MsG0280010650.01 | MsG0380013475.01 | 0.820951 | 5.229799e-53 | 4.197796e-50 |
| MsG0280010650.01 | MsG0380013476.01 | 0.815543 | 8.760455e-52 | 6.057436e-49 |
| MsG0280010650.01 | MsG0380015332.01 | 0.827526 | 1.489911e-54 | 1.442002e-51 |
| MsG0280010650.01 | MsG0380015551.01 | 0.806062 | 9.871785e-50 | 5.307131e-47 |
| MsG0280010650.01 | MsG0380015677.01 | 0.839669 | 1.379908e-57 | 1.919075e-54 |
| MsG0280010650.01 | MsG0380015786.01 | 0.815453 | 9.172951e-52 | 6.327167e-49 |
| MsG0280010650.01 | MsG0380015808.01 | 0.806459 | 8.143370e-50 | 4.422480e-47 |
| MsG0280010650.01 | MsG0380016140.01 | 0.841402 | 4.857982e-58 | 7.130436e-55 |
| MsG0280010650.01 | MsG0380016247.01 | 0.824184 | 9.262338e-54 | 8.144998e-51 |
| MsG0280010650.01 | MsG0380016517.01 | 0.810454 | 1.143677e-50 | 6.896598e-48 |
| MsG0280010650.01 | MsG0380016703.01 | 0.819456 | 1.150674e-52 | 8.859515e-50 |
| MsG0280010650.01 | MsG0380016919.01 | 0.817479 | 3.228251e-52 | 2.353701e-49 |
| MsG0280010650.01 | MsG0380016920.01 | 0.806481 | 8.054037e-50 | 4.376385e-47 |
| MsG0280010650.01 | MsG0380016994.01 | 0.831482 | 1.627917e-55 | 1.768950e-52 |
| MsG0280010650.01 | MsG0380017159.01 | 0.800277 | 1.554199e-48 | 7.207390e-46 |
| MsG0280010650.01 | MsG0380017372.01 | 0.811791 | 5.867245e-51 | 3.665852e-48 |
| MsG0280010650.01 | MsG0480018163.01 | 0.805630 | 1.216816e-49 | 6.469449e-47 |
| MsG0280010650.01 | MsG0480019350.01 | 0.815877 | 7.379506e-52 | 5.149193e-49 |
| MsG0280010650.01 | MsG0480019710.01 | 0.825800 | 3.846692e-54 | 3.542753e-51 |
| MsG0280010650.01 | MsG0480019922.01 | 0.806741 | 7.098073e-50 | 3.882737e-47 |
| MsG0280010650.01 | MsG0480020402.01 | 0.819274 | 1.265796e-52 | 9.695871e-50 |
| MsG0280010650.01 | MsG0480020495.01 | 0.810391 | 1.179963e-50 | 7.103472e-48 |
| MsG0280010650.01 | MsG0480020699.01 | 0.822576 | 2.199943e-53 | 1.848809e-50 |
| MsG0280010650.01 | MsG0480020739.01 | 0.808625 | 2.825542e-50 | 1.623387e-47 |
| MsG0280010650.01 | MsG0480020780.01 | 0.810424 | 1.160878e-50 | 6.994666e-48 |
| MsG0280010650.01 | MsG0480020847.01 | 0.823746 | 1.173590e-53 | 1.019451e-50 |
| MsG0280010650.01 | MsG0480020909.01 | 0.840118 | 1.053928e-57 | 1.486548e-54 |
| MsG0280010650.01 | MsG0480020965.01 | 0.826147 | 3.181603e-54 | 2.959187e-51 |
| MsG0280010650.01 | MsG0480021013.01 | 0.800241 | 1.580333e-48 | 7.321752e-46 |
| MsG0280010650.01 | MsG0480021727.01 | 0.800444 | 1.437444e-48 | 6.694113e-46 |
| MsG0280010650.01 | MsG0480022045.01 | 0.844362 | 7.923925e-59 | 1.276133e-55 |
| MsG0280010650.01 | MsG0480022331.01 | 0.802818 | 4.682874e-49 | 2.316391e-46 |
| MsG0280010650.01 | MsG0480022549.01 | 0.803673 | 3.116150e-49 | 1.575353e-46 |
| MsG0280010650.01 | MsG0480022788.01 | 0.825118 | 5.580456e-54 | 5.040494e-51 |
| MsG0280010650.01 | MsG0480023463.01 | 0.822374 | 2.450899e-53 | 2.047838e-50 |
| MsG0280010650.01 | MsG0480023647.01 | 0.809723 | 1.643289e-50 | 9.721999e-48 |
| MsG0280010650.01 | MsG0580024038.01 | 0.818787 | 1.633580e-52 | 1.234632e-49 |
| MsG0280010650.01 | MsG0580024330.01 | 0.823619 | 1.256638e-53 | 1.087588e-50 |
| MsG0280010650.01 | MsG0580024489.01 | 0.814726 | 1.330100e-51 | 8.994600e-49 |
| MsG0280010650.01 | MsG0580025614.01 | 0.815180 | 1.054796e-51 | 7.220608e-49 |
| MsG0280010650.01 | MsG0580026089.01 | 0.814804 | 1.278497e-51 | 8.663705e-49 |
| MsG0280010650.01 | MsG0580028176.01 | 0.822986 | 1.766292e-53 | 1.501600e-50 |
| MsG0280010650.01 | MsG0580029640.01 | 0.825926 | 3.591856e-54 | 3.319877e-51 |
| MsG0280010650.01 | MsG0680030949.01 | 0.828754 | 7.542709e-55 | 7.565550e-52 |
| MsG0280010650.01 | MsG0680031214.01 | 0.805392 | 1.364566e-49 | 7.210707e-47 |
| MsG0280010650.01 | MsG0680031353.01 | 0.830389 | 3.018958e-55 | 3.176158e-52 |
| MsG0280010650.01 | MsG0680031506.01 | 0.809302 | 2.023988e-50 | 1.184045e-47 |
| MsG0280010650.01 | MsG0680034842.01 | 0.839845 | 1.241496e-57 | 1.736131e-54 |
| MsG0280010650.01 | MsG0680034853.01 | 0.822048 | 2.917680e-53 | 2.414915e-50 |
| MsG0280010650.01 | MsG0780036477.01 | 0.824270 | 8.840038e-54 | 7.792146e-51 |
| MsG0280010650.01 | MsG0780036752.01 | 0.835480 | 1.637624e-56 | 2.005090e-53 |
| MsG0280010650.01 | MsG0780037054.01 | 0.805016 | 1.636185e-49 | 8.562822e-47 |
| MsG0280010650.01 | MsG0780038386.01 | 0.815962 | 7.066410e-52 | 4.942289e-49 |
| MsG0280010650.01 | MsG0780038401.01 | 0.807583 | 4.708777e-50 | 2.632445e-47 |
| MsG0280010650.01 | MsG0780038424.01 | 0.844139 | 9.097174e-59 | 1.455045e-55 |
| MsG0280010650.01 | MsG0780038602.01 | 0.807044 | 6.125082e-50 | 3.376813e-47 |
| MsG0280010650.01 | MsG0780038690.01 | 0.812686 | 3.741680e-51 | 2.394703e-48 |
| MsG0280010650.01 | MsG0780038691.01 | 0.802609 | 5.172086e-49 | 2.544591e-46 |
| MsG0280010650.01 | MsG0780039655.01 | 0.826553 | 2.546136e-54 | 2.395593e-51 |
| MsG0280010650.01 | MsG0780039866.01 | 0.822509 | 2.280123e-53 | 1.912412e-50 |
| MsG0280010650.01 | MsG0780040057.01 | 0.825938 | 3.568063e-54 | 3.299056e-51 |
| MsG0280010650.01 | MsG0780040307.01 | 0.806215 | 9.164944e-50 | 4.946578e-47 |
| MsG0280010650.01 | MsG0780040669.01 | 0.821477 | 3.954420e-53 | 3.220621e-50 |
| MsG0280010650.01 | MsG0880042091.01 | 0.818638 | 1.766001e-52 | 1.329163e-49 |
| MsG0280010650.01 | MsG0880042380.01 | 0.808739 | 2.671138e-50 | 1.539250e-47 |
| MsG0280010650.01 | MsG0880042961.01 | 0.805668 | 1.194676e-49 | 6.357988e-47 |
| MsG0280010650.01 | MsG0880043034.01 | 0.817405 | 3.354507e-52 | 2.440748e-49 |
| MsG0280010650.01 | MsG0880043479.01 | 0.806256 | 8.985447e-50 | 4.854605e-47 |
| MsG0280010650.01 | MsG0880043516.01 | 0.808985 | 2.366561e-50 | 1.372705e-47 |
| MsG0280010650.01 | MsG0880043614.01 | 0.806138 | 9.513409e-50 | 5.124390e-47 |
| MsG0280010650.01 | MsG0880044210.01 | 0.801313 | 9.549309e-49 | 4.546146e-46 |
| MsG0280010650.01 | MsG0880046012.01 | 0.806377 | 8.472792e-50 | 4.591592e-47 |
| MsG0280010650.01 | MsG0880046645.01 | 0.810745 | 9.893486e-51 | 6.012902e-48 |
| MsG0280010650.01 | MsG0880047226.01 | 0.810405 | 1.171977e-50 | 7.057990e-48 |
| MsG0280010650.01 | MsG0880047596.01 | 0.820384 | 7.056073e-53 | 5.575186e-50 |
| MsG0280010650.01 | MsG0880047666.01 | 0.820162 | 7.935805e-53 | 6.231617e-50 |
| MsG0280006762.01 | MsG0280010650.01 | 0.837885 | 3.991896e-57 | 5.257374e-54 |
| MsG0280007452.01 | MsG0280010650.01 | 0.811360 | 7.279307e-51 | 4.496500e-48 |
| MsG0280008362.01 | MsG0280010650.01 | 0.817730 | 2.833341e-52 | 2.080058e-49 |
| MsG0280009266.01 | MsG0280010650.01 | 0.800947 | 1.134536e-48 | 5.351636e-46 |
| MsG0280009794.01 | MsG0280010650.01 | 0.821919 | 3.125683e-53 | 2.577717e-50 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010650.01.T01 | MTR_2g089490 | 97.020 | 302 | 9 | 0 | 1 | 302 | 1 | 302 | 0.0 | 610 |
| MsG0280010650.01.T01 | MTR_2g089490 | 96.026 | 302 | 9 | 1 | 1 | 302 | 1 | 299 | 0.0 | 598 |
| MsG0280010650.01.T01 | MTR_2g011500 | 41.304 | 276 | 139 | 6 | 1 | 272 | 44 | 300 | 1.09e-64 | 206 |
| MsG0280010650.01.T01 | MTR_5g032550 | 32.714 | 269 | 167 | 7 | 28 | 290 | 69 | 329 | 1.05e-35 | 131 |
| MsG0280010650.01.T01 | MTR_5g035360 | 33.333 | 252 | 154 | 4 | 6 | 248 | 27 | 273 | 5.51e-32 | 121 |
| MsG0280010650.01.T01 | MTR_4g080990 | 32.787 | 244 | 146 | 7 | 36 | 270 | 77 | 311 | 2.72e-31 | 120 |
| MsG0280010650.01.T01 | MTR_3g100710 | 32.210 | 267 | 162 | 6 | 28 | 283 | 74 | 332 | 4.39e-31 | 119 |
| MsG0280010650.01.T01 | MTR_5g032550 | 36.464 | 181 | 108 | 3 | 28 | 205 | 69 | 245 | 7.26e-31 | 117 |
| MsG0280010650.01.T01 | MTR_8g063120 | 33.636 | 220 | 137 | 3 | 32 | 247 | 75 | 289 | 1.04e-29 | 115 |
| MsG0280010650.01.T01 | MTR_5g065830 | 28.814 | 295 | 193 | 6 | 19 | 301 | 56 | 345 | 5.55e-29 | 114 |
| MsG0280010650.01.T01 | MTR_4g094942 | 28.626 | 262 | 169 | 7 | 51 | 301 | 82 | 336 | 3.16e-27 | 109 |
| MsG0280010650.01.T01 | MTR_8g063120 | 34.135 | 208 | 116 | 4 | 32 | 235 | 75 | 265 | 1.45e-26 | 105 |
| MsG0280010650.01.T01 | MTR_5g015670 | 32.474 | 194 | 123 | 3 | 59 | 251 | 113 | 299 | 1.67e-25 | 104 |
| MsG0280010650.01.T01 | MTR_8g068950 | 26.299 | 308 | 191 | 7 | 19 | 300 | 62 | 359 | 2.07e-24 | 101 |
| MsG0280010650.01.T01 | MTR_3g102310 | 31.004 | 229 | 137 | 8 | 26 | 244 | 62 | 279 | 8.22e-23 | 97.1 |
| MsG0280010650.01.T01 | MTR_1g107535 | 28.094 | 299 | 186 | 9 | 19 | 301 | 74 | 359 | 1.88e-21 | 93.6 |
| MsG0280010650.01.T01 | MTR_3g100710 | 28.302 | 265 | 146 | 6 | 28 | 283 | 74 | 303 | 1.18e-19 | 87.8 |
| MsG0280010650.01.T01 | MTR_3g103080 | 32.663 | 199 | 123 | 5 | 69 | 261 | 87 | 280 | 2.37e-18 | 84.0 |
| MsG0280010650.01.T01 | MTR_4g095790 | 27.668 | 253 | 169 | 6 | 2 | 251 | 30 | 271 | 3.09e-18 | 84.0 |
| MsG0280010650.01.T01 | MTR_2g081170 | 28.972 | 214 | 126 | 7 | 19 | 219 | 17 | 217 | 2.97e-16 | 79.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010650.01.T01 | AT4G03270 | 45.397 | 315 | 139 | 10 | 1 | 301 | 1 | 296 | 1.52e-77 | 238 |
| MsG0280010650.01.T01 | AT4G03270 | 45.079 | 315 | 139 | 11 | 1 | 301 | 1 | 295 | 2.96e-75 | 233 |
| MsG0280010650.01.T01 | AT1G70210 | 33.065 | 248 | 145 | 5 | 14 | 250 | 45 | 282 | 3.15e-38 | 138 |
| MsG0280010650.01.T01 | AT5G65420 | 39.378 | 193 | 106 | 6 | 28 | 214 | 54 | 241 | 1.47e-34 | 127 |
| MsG0280010650.01.T01 | AT5G65420 | 39.378 | 193 | 106 | 6 | 28 | 214 | 54 | 241 | 2.29e-34 | 127 |
| MsG0280010650.01.T01 | AT2G22490 | 32.130 | 277 | 159 | 8 | 21 | 280 | 67 | 331 | 1.13e-33 | 126 |
| MsG0280010650.01.T01 | AT5G65420 | 37.624 | 202 | 107 | 6 | 28 | 214 | 54 | 251 | 2.14e-33 | 125 |
| MsG0280010650.01.T01 | AT2G22490 | 32.014 | 278 | 159 | 9 | 21 | 280 | 67 | 332 | 6.44e-32 | 122 |
| MsG0280010650.01.T01 | AT5G10440 | 34.783 | 207 | 123 | 5 | 15 | 215 | 33 | 233 | 4.93e-30 | 115 |
| MsG0280010650.01.T01 | AT5G65420 | 38.372 | 172 | 95 | 6 | 28 | 193 | 54 | 220 | 4.92e-28 | 108 |
| MsG0280010650.01.T01 | AT5G10440 | 37.662 | 154 | 85 | 4 | 15 | 163 | 33 | 180 | 2.14e-25 | 101 |
| MsG0280010650.01.T01 | AT4G34160 | 28.141 | 199 | 138 | 2 | 64 | 261 | 102 | 296 | 5.77e-22 | 95.1 |
| MsG0280010650.01.T01 | AT3G50070 | 27.184 | 206 | 144 | 3 | 64 | 268 | 101 | 301 | 1.38e-21 | 94.0 |
| MsG0280010650.01.T01 | AT5G67260 | 28.431 | 204 | 139 | 3 | 64 | 264 | 111 | 310 | 1.40e-21 | 94.0 |
| MsG0280010650.01.T01 | AT5G67260 | 28.431 | 204 | 139 | 3 | 64 | 264 | 111 | 310 | 2.81e-21 | 93.6 |
| MsG0280010650.01.T01 | AT4G37630 | 33.143 | 175 | 101 | 6 | 38 | 204 | 59 | 225 | 1.41e-16 | 78.2 |
| MsG0280010650.01.T01 | AT4G37630 | 32.768 | 177 | 101 | 7 | 38 | 204 | 59 | 227 | 5.17e-16 | 76.6 |
| MsG0280010650.01.T01 | AT4G37630 | 32.768 | 177 | 101 | 7 | 38 | 204 | 59 | 227 | 1.32e-15 | 76.3 |
Find 77 sgRNAs with CRISPR-Local
Find 149 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTACCTAGCTATCAACTATT+TGG | 0.206116 | 2:-72867012 | MsG0280010650.01.T01:CDS |
| ATATGTATATCTAATCATTT+TGG | 0.219595 | 2:-72864930 | MsG0280010650.01.T01:three_prime_UTR |
| GCTTGATGAAATAACATTAA+AGG | 0.226179 | 2:-72866409 | MsG0280010650.01.T01:CDS |
| TTGTTCTGTCTCTTAGCTTA+TGG | 0.267188 | 2:-72865039 | MsG0280010650.01.T01:three_prime_UTR |
| CTTTCAATATCCATGCTTCT+TGG | 0.273803 | 2:-72866152 | MsG0280010650.01.T01:CDS |
| ATAACAACATTTAATCATTC+TGG | 0.294548 | 2:-72865380 | MsG0280010650.01.T01:three_prime_UTR |
| AAGATGATAAGCATTGTTAT+AGG | 0.308241 | 2:+72867521 | None:intergenic |
| TTTAATGTGCATTCAAGTTC+AGG | 0.315528 | 2:-72865554 | MsG0280010650.01.T01:CDS |
| CCTCGCTAACCAAGGAATAT+TGG | 0.325308 | 2:-72866982 | MsG0280010650.01.T01:intron |
| AAGTAAGGAATGAAAGAAAA+AGG | 0.337620 | 2:+72866447 | None:intergenic |
| TTTATTTACATATGAACAAT+TGG | 0.357614 | 2:+72866120 | None:intergenic |
| AGAATGGAAGCACTTGTCTT+AGG | 0.365894 | 2:-72866501 | MsG0280010650.01.T01:CDS |
| GTACTCTGCTACTGATGTTC+AGG | 0.368096 | 2:-72866685 | MsG0280010650.01.T01:intron |
| ATTATATTGAAGTCACAAAA+AGG | 0.370173 | 2:-72866363 | MsG0280010650.01.T01:intron |
| AGGAACATGGAAGAAAATAT+TGG | 0.380385 | 2:-72865163 | MsG0280010650.01.T01:three_prime_UTR |
| AGTAATTTAGTGGAGGGATA+TGG | 0.382669 | 2:+72867361 | None:intergenic |
| CATCAAACTCATTTGATTTG+AGG | 0.384576 | 2:+72867331 | None:intergenic |
| CACAAATGGATCAAAATTGC+AGG | 0.385190 | 2:+72867037 | None:intergenic |
| CTTACTTCACAAATTTGTTT+AGG | 0.391668 | 2:-72866431 | MsG0280010650.01.T01:CDS |
| AGATGATAAGCATTGTTATA+GGG | 0.399065 | 2:+72867522 | None:intergenic |
| CAGCATTAATCATTCTTGTA+TGG | 0.411119 | 2:+72865356 | None:intergenic |
| TTTCAATATCCATGCTTCTT+GGG | 0.414331 | 2:-72866151 | MsG0280010650.01.T01:CDS |
| CTAAACAAATTTGTGAAGTA+AGG | 0.421385 | 2:+72866432 | None:intergenic |
| AGTTTGTTTGCCCATGGCTT+TGG | 0.421863 | 2:+72866756 | None:intergenic |
| AAAGAGGAGTGATAAAGAAA+AGG | 0.429027 | 2:+72867550 | None:intergenic |
| CAAATGAATAATAGTATAGT+AGG | 0.442546 | 2:-72865016 | MsG0280010650.01.T01:three_prime_UTR |
| ATTACTGCAGGAAAGTGTTA+TGG | 0.446640 | 2:-72865627 | MsG0280010650.01.T01:intron |
| TATTAGGCTCTTATGAATCA+TGG | 0.448343 | 2:-72866561 | MsG0280010650.01.T01:intron |
| GAAATTTGATCCATGGTTTG+TGG | 0.449829 | 2:-72865244 | MsG0280010650.01.T01:three_prime_UTR |
| GATGAGGCAGCAACTATAGA+TGG | 0.457339 | 2:+72866205 | None:intergenic |
| GAATCAGATGAAAGCTATGT+AGG | 0.472044 | 2:+72867601 | None:intergenic |
| GCAAGTAGTTTGTTTGCCCA+TGG | 0.487774 | 2:+72866750 | None:intergenic |
| TAAATCTGCTGATTGTGAAA+AGG | 0.489717 | 2:-72865183 | MsG0280010650.01.T01:three_prime_UTR |
| GATCCAAATAGTTGATAGCT+AGG | 0.490726 | 2:+72867009 | None:intergenic |
| TATTTCCATGACCTTACTAC+TGG | 0.491025 | 2:-72867420 | MsG0280010650.01.T01:CDS |
| AAGAGAAGCATTTCAAAAGA+AGG | 0.492011 | 2:-72865442 | MsG0280010650.01.T01:CDS |
| AAACATCTTCACCAGTAGTA+AGG | 0.492619 | 2:+72867409 | None:intergenic |
| GATACAAGATATAGCTAAAG+AGG | 0.498666 | 2:-72865591 | MsG0280010650.01.T01:CDS |
| CAAGAAGCATGGATATTGAA+AGG | 0.504707 | 2:+72866153 | None:intergenic |
| TTTCATCTCTTTGATCTCAC+AGG | 0.506071 | 2:-72867292 | MsG0280010650.01.T01:intron |
| ATAGCTAGGTAAGTCACAAA+TGG | 0.506427 | 2:+72867023 | None:intergenic |
| ATTCACCAATGAGAAACAAA+AGG | 0.507119 | 2:-72867716 | None:intergenic |
| TAATAGTATAGTAGGAGTGA+AGG | 0.507559 | 2:-72865008 | MsG0280010650.01.T01:three_prime_UTR |
| AATCAGATGAAAGCTATGTA+GGG | 0.509072 | 2:+72867602 | None:intergenic |
| TTTGAAAGTAATTTAGTGGA+GGG | 0.521266 | 2:+72867355 | None:intergenic |
| ATGAGCAACATTGGTTCCGT+TGG | 0.521294 | 2:+72865478 | None:intergenic |
| AAGAAGCATGGATATTGAAA+GGG | 0.521809 | 2:+72866154 | None:intergenic |
| CATAGTAGTATGAGCAACAT+TGG | 0.534202 | 2:+72865469 | None:intergenic |
| GATATTATTCCCAAGAAGCA+TGG | 0.534390 | 2:+72866142 | None:intergenic |
| TTGTTATAGGGAGAGAAAAG+AGG | 0.545239 | 2:+72867534 | None:intergenic |
| TTGTATTGTCTGATTTGTAG+TGG | 0.545844 | 2:-72865066 | MsG0280010650.01.T01:three_prime_UTR |
| CTTCACCAGTAGTAAGGTCA+TGG | 0.546701 | 2:+72867415 | None:intergenic |
| TGAAGCATAGAGAAGGGATG+AGG | 0.552728 | 2:+72866189 | None:intergenic |
| TCCATGGATGTGTGAATATG+TGG | 0.564180 | 2:+72867468 | None:intergenic |
| ATATGTGGAGAAGTTGTTAG+TGG | 0.565619 | 2:+72867483 | None:intergenic |
| CTTATGAATCATGGTGATGG+TGG | 0.566485 | 2:-72866552 | MsG0280010650.01.T01:CDS |
| CCAATATTCCTTGGTTAGCG+AGG | 0.574453 | 2:+72866982 | None:intergenic |
| TGTAACAGCAACCAAAGCCA+TGG | 0.575586 | 2:-72866767 | MsG0280010650.01.T01:intron |
| TTGTCTTAGGAGCACTACAT+TGG | 0.578863 | 2:-72866488 | MsG0280010650.01.T01:CDS |
| TCCACATATTCACACATCCA+TGG | 0.579979 | 2:-72867469 | MsG0280010650.01.T01:exon |
| ACTCATGTGAAGCATAGAGA+AGG | 0.592114 | 2:+72866182 | None:intergenic |
| ACTTGAATGCACATTAAACA+TGG | 0.595158 | 2:+72865559 | None:intergenic |
| ACCAATGAGAAACAAAAGGA+AGG | 0.600474 | 2:-72867712 | None:intergenic |
| ATAATAGGAAGAGATAGTGA+TGG | 0.609927 | 2:-72865291 | MsG0280010650.01.T01:three_prime_UTR |
| GATCGCTTCCTCGCTAACCA+AGG | 0.614318 | 2:-72866990 | MsG0280010650.01.T01:CDS |
| CTCATGTGAAGCATAGAGAA+GGG | 0.619559 | 2:+72866183 | None:intergenic |
| GGTCATGGAAATATTCAAGA+GGG | 0.626065 | 2:+72867430 | None:intergenic |
| GCTGATTGTGAAAAGGAACA+TGG | 0.627395 | 2:-72865176 | MsG0280010650.01.T01:three_prime_UTR |
| GTAACAGCAACCAAAGCCAT+GGG | 0.635375 | 2:-72866766 | MsG0280010650.01.T01:intron |
| ACTGTAACGTGATCCTCGTA+CGG | 0.638884 | 2:-72865213 | MsG0280010650.01.T01:three_prime_UTR |
| AGGTCATGGAAATATTCAAG+AGG | 0.642540 | 2:+72867429 | None:intergenic |
| ATCAGATGAAAGCTATGTAG+GGG | 0.642939 | 2:+72867603 | None:intergenic |
| GCATTCAAGTTCAGGCACAC+CGG | 0.643043 | 2:-72865546 | MsG0280010650.01.T01:CDS |
| GCTCTTATGAATCATGGTGA+TGG | 0.645607 | 2:-72866555 | MsG0280010650.01.T01:CDS |
| GATGAAATCACTTCTAACTG+AGG | 0.646020 | 2:+72867308 | None:intergenic |
| GGATATGGTCAGATTCAATG+AGG | 0.656053 | 2:+72867376 | None:intergenic |
| GATTTAATGAAAACCGTACG+AGG | 0.695937 | 2:+72865200 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAATGTATAAATTTTGTTA+GGG | - | Chr2:72866611-72866630 | MsG0280010650.01.T01:intron | 10.0% |
| !!! | TATAATGTATAAATTTTGTT+AGG | - | Chr2:72866610-72866629 | MsG0280010650.01.T01:intron | 10.0% |
| !! | AATATCTCTTATAAAAACTT+TGG | + | Chr2:72866011-72866030 | None:intergenic | 15.0% |
| !! | ATCTTATTAAACAACATTAT+TGG | - | Chr2:72865690-72865709 | MsG0280010650.01.T01:intron | 15.0% |
| !! | GAAAAAAAAGATACAATAAT+AGG | - | Chr2:72867319-72867338 | MsG0280010650.01.T01:CDS | 15.0% |
| !! | TTTATTTACATATGAACAAT+TGG | + | Chr2:72866508-72866527 | None:intergenic | 15.0% |
| !!! | AAGAATAACAATTTTTAATG+TGG | - | Chr2:72865541-72865560 | MsG0280010650.01.T01:CDS | 15.0% |
| !!! | AGAATAACAATTTTTAATGT+GGG | - | Chr2:72865542-72865561 | MsG0280010650.01.T01:CDS | 15.0% |
| !!! | ATATGTATATCTAATCATTT+TGG | - | Chr2:72867695-72867714 | MsG0280010650.01.T01:five_prime_UTR | 15.0% |
| !!! | GTATTTTACTTATTGATATT+AGG | - | Chr2:72866048-72866067 | MsG0280010650.01.T01:intron | 15.0% |
| !!! | TTAATAATTTTTTACCTATG+AGG | + | Chr2:72865979-72865998 | None:intergenic | 15.0% |
| !! | ATAACAACATTTAATCATTC+TGG | - | Chr2:72867245-72867264 | MsG0280010650.01.T01:intron | 20.0% |
| !! | ATTATATTGAAGTCACAAAA+AGG | - | Chr2:72866262-72866281 | MsG0280010650.01.T01:intron | 20.0% |
| !! | CAAATGAATAATAGTATAGT+AGG | - | Chr2:72867609-72867628 | MsG0280010650.01.T01:five_prime_UTR | 20.0% |
| !! | CTTGAGATCTAAATTAAAAT+GGG | - | Chr2:72865829-72865848 | MsG0280010650.01.T01:intron | 20.0% |
| !! | TAACTGAACAAAAAAAGTTA+AGG | - | Chr2:72867295-72867314 | MsG0280010650.01.T01:CDS | 20.0% |
| !! | TAGTCCTTAATGTTATAAAT+TGG | + | Chr2:72866702-72866721 | None:intergenic | 20.0% |
| !! | TTAATGAGAATGTGAAAAAA+AGG | - | Chr2:72867359-72867378 | MsG0280010650.01.T01:CDS | 20.0% |
| !! | TTGAAATATCGAGTTTAATA+TGG | - | Chr2:72866859-72866878 | MsG0280010650.01.T01:intron | 20.0% |
| !! | TTTGCCAATTTATAACATTA+AGG | - | Chr2:72866695-72866714 | MsG0280010650.01.T01:CDS | 20.0% |
| !!! | CATTTTAATTTAGATCTCAA+GGG | + | Chr2:72865830-72865849 | None:intergenic | 20.0% |
| !!! | CATTTTTTTTGTCAAAATCA+CGG | - | Chr2:72865463-72865482 | MsG0280010650.01.T01:CDS | 20.0% |
| !!! | TTTTGTTTTTTCAGATGTAA+AGG | - | Chr2:72866383-72866402 | MsG0280010650.01.T01:CDS | 20.0% |
| ! | AAAAAAGGAAATTTGATCCA+TGG | - | Chr2:72867374-72867393 | MsG0280010650.01.T01:CDS | 25.0% |
| ! | AAGTAAGGAATGAAAGAAAA+AGG | + | Chr2:72866181-72866200 | None:intergenic | 25.0% |
| ! | ACAAAATGTAAGAGACTAAA+AGG | + | Chr2:72866650-72866669 | None:intergenic | 25.0% |
| ! | CAAAATGTAAGAGACTAAAA+GGG | + | Chr2:72866649-72866668 | None:intergenic | 25.0% |
| ! | CACTTTCTTTAATAATGCTT+AGG | + | Chr2:72865783-72865802 | None:intergenic | 25.0% |
| ! | CCTTGAGATCTAAATTAAAA+TGG | - | Chr2:72865828-72865847 | MsG0280010650.01.T01:intron | 25.0% |
| ! | CTAAACAAATTTGTGAAGTA+AGG | + | Chr2:72866196-72866215 | None:intergenic | 25.0% |
| ! | CTAAGCATTATTAAAGAAAG+TGG | - | Chr2:72865781-72865800 | MsG0280010650.01.T01:intron | 25.0% |
| ! | GACACAAACAATAAAAAGAA+TGG | - | Chr2:72866108-72866127 | MsG0280010650.01.T01:intron | 25.0% |
| ! | GCTTGATGAAATAACATTAA+AGG | - | Chr2:72866216-72866235 | MsG0280010650.01.T01:CDS | 25.0% |
| ! | GTAAAAAAACTTTACCTCAT+AGG | - | Chr2:72865962-72865981 | MsG0280010650.01.T01:intron | 25.0% |
| ! | TATAAATTGGCAAACGATTA+AGG | + | Chr2:72866689-72866708 | None:intergenic | 25.0% |
| ! | TTAAACAACATTATTGGACT+TGG | - | Chr2:72865696-72865715 | MsG0280010650.01.T01:intron | 25.0% |
| ! | TTGTTTAATAAGATTGAGCA+TGG | + | Chr2:72865684-72865703 | None:intergenic | 25.0% |
| ! | TTTGAAAGTAATTTAGTGGA+GGG | + | Chr2:72865273-72865292 | None:intergenic | 25.0% |
| !! | AAGATGATAAGCATTGTTAT+AGG | + | Chr2:72865107-72865126 | None:intergenic | 25.0% |
| !! | AGATGATAAGCATTGTTATA+GGG | + | Chr2:72865106-72865125 | None:intergenic | 25.0% |
| !! | ATTTTCTTACCAATATTCCT+TGG | + | Chr2:72865655-72865674 | None:intergenic | 25.0% |
| !! | CTTACTTCACAAATTTGTTT+AGG | - | Chr2:72866194-72866213 | MsG0280010650.01.T01:CDS | 25.0% |
| !!! | AGGTTTTGAAAGTAATTTAG+TGG | + | Chr2:72865277-72865296 | None:intergenic | 25.0% |
| !!! | CCATTTTAATTTAGATCTCA+AGG | + | Chr2:72865831-72865850 | None:intergenic | 25.0% |
| !!! | TTTTGAAAGTAATTTAGTGG+AGG | + | Chr2:72865274-72865293 | None:intergenic | 25.0% |
| !!! | TTTTTCAGATGTAAAGGTTA+TGG | - | Chr2:72866389-72866408 | MsG0280010650.01.T01:CDS | 25.0% |
| AAAGAGGAGTGATAAAGAAA+AGG | + | Chr2:72865078-72865097 | None:intergenic | 30.0% | |
| AATCAGATGAAAGCTATGTA+GGG | + | Chr2:72865026-72865045 | None:intergenic | 30.0% | |
| ACTTGAATGCACATTAAACA+TGG | + | Chr2:72867069-72867088 | None:intergenic | 30.0% | |
| AGGAACATGGAAGAAAATAT+TGG | - | Chr2:72867462-72867481 | MsG0280010650.01.T01:exon | 30.0% | |
| AGTTGTGAACATAGATTGTA+TGG | - | Chr2:72866775-72866794 | MsG0280010650.01.T01:intron | 30.0% | |
| ATAATAGGAAGAGATAGTGA+TGG | - | Chr2:72867334-72867353 | MsG0280010650.01.T01:CDS | 30.0% | |
| CAGCATTAATCATTCTTGTA+TGG | + | Chr2:72867272-72867291 | None:intergenic | 30.0% | |
| GATACAAGATATAGCTAAAG+AGG | - | Chr2:72867034-72867053 | MsG0280010650.01.T01:CDS | 30.0% | |
| GTCGTTTAATTAAGATTGGA+TGG | + | Chr2:72866886-72866905 | None:intergenic | 30.0% | |
| GTTGGTCGTTTAATTAAGAT+TGG | + | Chr2:72866890-72866909 | None:intergenic | 30.0% | |
| GTTGTGAACATAGATTGTAT+GGG | - | Chr2:72866776-72866795 | MsG0280010650.01.T01:intron | 30.0% | |
| TAATAGTATAGTAGGAGTGA+AGG | - | Chr2:72867617-72867636 | MsG0280010650.01.T01:five_prime_UTR | 30.0% | |
| TATTAGGCTCTTATGAATCA+TGG | - | Chr2:72866064-72866083 | MsG0280010650.01.T01:intron | 30.0% | |
| TTACCTAGCTATCAACTATT+TGG | - | Chr2:72865613-72865632 | MsG0280010650.01.T01:CDS | 30.0% | |
| TTGGAAAGTGAAAAAACCAA+CGG | - | Chr2:72867131-72867150 | MsG0280010650.01.T01:intron | 30.0% | |
| TTGTGAACATAGATTGTATG+GGG | - | Chr2:72866777-72866796 | MsG0280010650.01.T01:intron | 30.0% | |
| TTTCAATATCCATGCTTCTT+GGG | - | Chr2:72866474-72866493 | MsG0280010650.01.T01:CDS | 30.0% | |
| ! | AAGAAGCATGGATATTGAAA+GGG | + | Chr2:72866474-72866493 | None:intergenic | 30.0% |
| ! | AAGGAAGAAATTTTGTTGGA+AGG | - | Chr2:72867636-72867655 | MsG0280010650.01.T01:five_prime_UTR | 30.0% |
| ! | AATATTCAAGAGGGTTTTCA+AGG | + | Chr2:72865189-72865208 | None:intergenic | 30.0% |
| ! | AATGAAAGAAAAAGGTGTGA+TGG | + | Chr2:72866173-72866192 | None:intergenic | 30.0% |
| ! | AGACGAAAATTTTCTAAGCT+TGG | - | Chr2:72867112-72867131 | MsG0280010650.01.T01:intron | 30.0% |
| ! | AGTGAAGGAAGAAATTTTGT+TGG | - | Chr2:72867632-72867651 | MsG0280010650.01.T01:five_prime_UTR | 30.0% |
| ! | ATGTTTTGTATCATTACTGC+AGG | - | Chr2:72866986-72867005 | MsG0280010650.01.T01:CDS | 30.0% |
| ! | TAAATCTGCTGATTGTGAAA+AGG | - | Chr2:72867442-72867461 | MsG0280010650.01.T01:CDS | 30.0% |
| ! | TTGTATTGTCTGATTTGTAG+TGG | - | Chr2:72867559-72867578 | MsG0280010650.01.T01:five_prime_UTR | 30.0% |
| ! | TTTAATGTGCATTCAAGTTC+AGG | - | Chr2:72867071-72867090 | MsG0280010650.01.T01:intron | 30.0% |
| ! | TTTTCGTCTAACACATTAAC+CGG | + | Chr2:72867101-72867120 | None:intergenic | 30.0% |
| !! | AAGAGAAGCATTTCAAAAGA+AGG | - | Chr2:72867183-72867202 | MsG0280010650.01.T01:intron | 30.0% |
| !! | CATCAAACTCATTTGATTTG+AGG | + | Chr2:72865297-72865316 | None:intergenic | 30.0% |
| AAACATCTTCACCAGTAGTA+AGG | + | Chr2:72865219-72865238 | None:intergenic | 35.0% | |
| AACATAGATTGTATGGGGTA+AGG | - | Chr2:72866782-72866801 | MsG0280010650.01.T01:intron | 35.0% | |
| AACATTCCCATGTGTATGTT+TGG | - | Chr2:72865382-72865401 | MsG0280010650.01.T01:three_prime_UTR | 35.0% | |
| AGGTCATGGAAATATTCAAG+AGG | + | Chr2:72865199-72865218 | None:intergenic | 35.0% | |
| AGTAATTTAGTGGAGGGATA+TGG | + | Chr2:72865267-72865286 | None:intergenic | 35.0% | |
| ATAGCTAGGTAAGTCACAAA+TGG | + | Chr2:72865605-72865624 | None:intergenic | 35.0% | |
| ATATGTGGAGAAGTTGTTAG+TGG | + | Chr2:72865145-72865164 | None:intergenic | 35.0% | |
| ATCAGATGAAAGCTATGTAG+GGG | + | Chr2:72865025-72865044 | None:intergenic | 35.0% | |
| CACAAATGGATCAAAATTGC+AGG | + | Chr2:72865591-72865610 | None:intergenic | 35.0% | |
| CATAGTAGTATGAGCAACAT+TGG | + | Chr2:72867159-72867178 | None:intergenic | 35.0% | |
| CTTTCAATATCCATGCTTCT+TGG | - | Chr2:72866473-72866492 | MsG0280010650.01.T01:CDS | 35.0% | |
| GAAATTTGATCCATGGTTTG+TGG | - | Chr2:72867381-72867400 | MsG0280010650.01.T01:CDS | 35.0% | |
| GAATCAGATGAAAGCTATGT+AGG | + | Chr2:72865027-72865046 | None:intergenic | 35.0% | |
| GATATTATTCCCAAGAAGCA+TGG | + | Chr2:72866486-72866505 | None:intergenic | 35.0% | |
| GATGAAATCACTTCTAACTG+AGG | + | Chr2:72865320-72865339 | None:intergenic | 35.0% | |
| GATTTAATGAAAACCGTACG+AGG | + | Chr2:72867428-72867447 | None:intergenic | 35.0% | |
| GGTCATGGAAATATTCAAGA+GGG | + | Chr2:72865198-72865217 | None:intergenic | 35.0% | |
| TATTTCCATGACCTTACTAC+TGG | - | Chr2:72865205-72865224 | MsG0280010650.01.T01:three_prime_UTR | 35.0% | |
| TTGTTATAGGGAGAGAAAAG+AGG | + | Chr2:72865094-72865113 | None:intergenic | 35.0% | |
| TTGTTCTGTCTCTTAGCTTA+TGG | - | Chr2:72867586-72867605 | MsG0280010650.01.T01:five_prime_UTR | 35.0% | |
| TTTCATCTCTTTGATCTCAC+AGG | - | Chr2:72865333-72865352 | MsG0280010650.01.T01:three_prime_UTR | 35.0% | |
| ! | CAAGAAGCATGGATATTGAA+AGG | + | Chr2:72866475-72866494 | None:intergenic | 35.0% |
| ! | GTGATTTTATCCACAAACCA+TGG | + | Chr2:72867394-72867413 | None:intergenic | 35.0% |
| !! | ATTACTGCAGGAAAGTGTTA+TGG | - | Chr2:72866998-72867017 | MsG0280010650.01.T01:CDS | 35.0% |
| !! | CTTTTTGTTTCCTCTCACAT+AGG | + | Chr2:72867505-72867524 | None:intergenic | 35.0% |
| !! | GATCCAAATAGTTGATAGCT+AGG | + | Chr2:72865619-72865638 | None:intergenic | 35.0% |
| !! | TCTTTCCTTCCTTTTGTTTC+TGG | + | Chr2:72864921-72864940 | None:intergenic | 35.0% |
| !!! | ATCGTTTTTTCCTATGTGAG+AGG | - | Chr2:72867492-72867511 | MsG0280010650.01.T01:five_prime_UTR | 35.0% |
| ACTCATGTGAAGCATAGAGA+AGG | + | Chr2:72866446-72866465 | None:intergenic | 40.0% | |
| ATATCTCGAGTACGTGAATG+TGG | - | Chr2:72866911-72866930 | MsG0280010650.01.T01:intron | 40.0% | |
| CATGTGTATGTTTGGATTCG+CGG | - | Chr2:72865390-72865409 | MsG0280010650.01.T01:three_prime_UTR | 40.0% | |
| CTCATGTGAAGCATAGAGAA+GGG | + | Chr2:72866445-72866464 | None:intergenic | 40.0% | |
| GCGAATCCAAACATACACAT+GGG | + | Chr2:72865391-72865410 | None:intergenic | 40.0% | |
| GCTCTTATGAATCATGGTGA+TGG | - | Chr2:72866070-72866089 | MsG0280010650.01.T01:intron | 40.0% | |
| GCTGATTGTGAAAAGGAACA+TGG | - | Chr2:72867449-72867468 | MsG0280010650.01.T01:CDS | 40.0% | |
| GGATATGGTCAGATTCAATG+AGG | + | Chr2:72865252-72865271 | None:intergenic | 40.0% | |
| GTAAGAGACTAAAAGGGAGA+GGG | + | Chr2:72866643-72866662 | None:intergenic | 40.0% | |
| TATCTCGAGTACGTGAATGT+GGG | - | Chr2:72866912-72866931 | MsG0280010650.01.T01:intron | 40.0% | |
| TCACGTACTCGAGATATTGT+TGG | + | Chr2:72866908-72866927 | None:intergenic | 40.0% | |
| TCCACATATTCACACATCCA+TGG | - | Chr2:72865156-72865175 | MsG0280010650.01.T01:three_prime_UTR | 40.0% | |
| TCCATGGATGTGTGAATATG+TGG | + | Chr2:72865160-72865179 | None:intergenic | 40.0% | |
| TGTAAGAGACTAAAAGGGAG+AGG | + | Chr2:72866644-72866663 | None:intergenic | 40.0% | |
| !! | AGAATGGAAGCACTTGTCTT+AGG | - | Chr2:72866124-72866143 | MsG0280010650.01.T01:CDS | 40.0% |
| !! | CTTATGAATCATGGTGATGG+TGG | - | Chr2:72866073-72866092 | MsG0280010650.01.T01:intron | 40.0% |
| !! | GTTTTCAAGGTCAAACTCCA+TGG | + | Chr2:72865176-72865195 | None:intergenic | 40.0% |
| !! | TTGTCTTAGGAGCACTACAT+TGG | - | Chr2:72866137-72866156 | MsG0280010650.01.T01:CDS | 40.0% |
| AAACCGATACCTGTGGGATA+CGG | + | Chr2:72866942-72866961 | None:intergenic | 45.0% | |
| ACTGTAACGTGATCCTCGTA+CGG | - | Chr2:72867412-72867431 | MsG0280010650.01.T01:CDS | 45.0% | |
| ATCTCGAGTACGTGAATGTG+GGG | - | Chr2:72866913-72866932 | MsG0280010650.01.T01:intron | 45.0% | |
| CATTCATGCAGTCACGACAT+TGG | - | Chr2:72866813-72866832 | MsG0280010650.01.T01:intron | 45.0% | |
| CCAATATTCCTTGGTTAGCG+AGG | + | Chr2:72865646-72865665 | None:intergenic | 45.0% | |
| CCTCGCTAACCAAGGAATAT+TGG | - | Chr2:72865643-72865662 | MsG0280010650.01.T01:intron | 45.0% | |
| CGCGAATCCAAACATACACA+TGG | + | Chr2:72865392-72865411 | None:intergenic | 45.0% | |
| CTTCACCAGTAGTAAGGTCA+TGG | + | Chr2:72865213-72865232 | None:intergenic | 45.0% | |
| GATGAGGCAGCAACTATAGA+TGG | + | Chr2:72866423-72866442 | None:intergenic | 45.0% | |
| GTAACAGCAACCAAAGCCAT+GGG | - | Chr2:72865859-72865878 | MsG0280010650.01.T01:intron | 45.0% | |
| GTACTCTGCTACTGATGTTC+AGG | - | Chr2:72865940-72865959 | MsG0280010650.01.T01:intron | 45.0% | |
| TGAAGCATAGAGAAGGGATG+AGG | + | Chr2:72866439-72866458 | None:intergenic | 45.0% | |
| TGTAACAGCAACCAAAGCCA+TGG | - | Chr2:72865858-72865877 | MsG0280010650.01.T01:intron | 45.0% | |
| ! | AGTTTGTTTGCCCATGGCTT+TGG | + | Chr2:72865872-72865891 | None:intergenic | 45.0% |
| !! | ATGAGCAACATTGGTTCCGT+TGG | + | Chr2:72867150-72867169 | None:intergenic | 45.0% |
| !! | GCAAGTAGTTTGTTTGCCCA+TGG | + | Chr2:72865878-72865897 | None:intergenic | 45.0% |
| !!! | ATATTAATTTTTTTTTAAGA+TGG | - | Chr2:72866026-72866045 | MsG0280010650.01.T01:intron | 5.0% |
| CATGCAGTCACGACATTGGA+TGG | - | Chr2:72866817-72866836 | MsG0280010650.01.T01:intron | 50.0% | |
| CCCTAGAAACCGATACCTGT+GGG | + | Chr2:72866948-72866967 | None:intergenic | 50.0% | |
| GATCCGTATCCCACAGGTAT+CGG | - | Chr2:72866936-72866955 | MsG0280010650.01.T01:intron | 50.0% | |
| TCTCGAGTACGTGAATGTGG+GGG | - | Chr2:72866914-72866933 | MsG0280010650.01.T01:intron | 50.0% | |
| ! | GCATTCAAGTTCAGGCACAC+CGG | - | Chr2:72867079-72867098 | MsG0280010650.01.T01:intron | 50.0% |
| !! | CCCACAGGTATCGGTTTCTA+GGG | - | Chr2:72866945-72866964 | MsG0280010650.01.T01:intron | 50.0% |
| !! | TCCCACAGGTATCGGTTTCT+AGG | - | Chr2:72866944-72866963 | MsG0280010650.01.T01:intron | 50.0% |
| GATCGCTTCCTCGCTAACCA+AGG | - | Chr2:72865635-72865654 | MsG0280010650.01.T01:intron | 55.0% | |
| GCCCTAGAAACCGATACCTG+TGG | + | Chr2:72866949-72866968 | None:intergenic | 55.0% | |
| GTGGGGGATCCGTATCCCAC+AGG | - | Chr2:72866930-72866949 | MsG0280010650.01.T01:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 72864920 | 72867727 | 72864920 | ID=MsG0280010650.01;Name=MsG0280010650.01 |
| Chr2 | mRNA | 72864920 | 72867727 | 72864920 | ID=MsG0280010650.01.T01;Parent=MsG0280010650.01;Name=MsG0280010650.01.T01;_AED=0.22;_eAED=0.22;_QI=255|1|1|1|1|1|6|513|302 |
| Chr2 | exon | 72864920 | 72865639 | 72864920 | ID=MsG0280010650.01.T01:exon:7181;Parent=MsG0280010650.01.T01 |
| Chr2 | exon | 72866120 | 72866250 | 72866120 | ID=MsG0280010650.01.T01:exon:7180;Parent=MsG0280010650.01.T01 |
| Chr2 | exon | 72866364 | 72866577 | 72866364 | ID=MsG0280010650.01.T01:exon:7179;Parent=MsG0280010650.01.T01 |
| Chr2 | exon | 72866686 | 72866781 | 72866686 | ID=MsG0280010650.01.T01:exon:7178;Parent=MsG0280010650.01.T01 |
| Chr2 | exon | 72866983 | 72867063 | 72866983 | ID=MsG0280010650.01.T01:exon:7177;Parent=MsG0280010650.01.T01 |
| Chr2 | exon | 72867293 | 72867727 | 72867293 | ID=MsG0280010650.01.T01:exon:7176;Parent=MsG0280010650.01.T01 |
| Chr2 | five_prime_UTR | 72867473 | 72867727 | 72867473 | ID=MsG0280010650.01.T01:five_prime_utr;Parent=MsG0280010650.01.T01 |
| Chr2 | CDS | 72867293 | 72867472 | 72867293 | ID=MsG0280010650.01.T01:cds;Parent=MsG0280010650.01.T01 |
| Chr2 | CDS | 72866983 | 72867063 | 72866983 | ID=MsG0280010650.01.T01:cds;Parent=MsG0280010650.01.T01 |
| Chr2 | CDS | 72866686 | 72866781 | 72866686 | ID=MsG0280010650.01.T01:cds;Parent=MsG0280010650.01.T01 |
| Chr2 | CDS | 72866364 | 72866577 | 72866364 | ID=MsG0280010650.01.T01:cds;Parent=MsG0280010650.01.T01 |
| Chr2 | CDS | 72866120 | 72866250 | 72866120 | ID=MsG0280010650.01.T01:cds;Parent=MsG0280010650.01.T01 |
| Chr2 | CDS | 72865433 | 72865639 | 72865433 | ID=MsG0280010650.01.T01:cds;Parent=MsG0280010650.01.T01 |
| Chr2 | three_prime_UTR | 72864920 | 72865432 | 72864920 | ID=MsG0280010650.01.T01:three_prime_utr;Parent=MsG0280010650.01.T01 |
| Gene Sequence |
| Protein sequence |
