AlfalfaGEDB | Msa0116590

M. sativa cultivar zhongmu-4 / Msa0116590

KEGG: -
GO: GO:0000003 GO:0000988 GO:0000989 GO:0001076 GO:0001101 GO:0001190 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006325 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006464 GO:0006473 GO:0006475 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0006996 GO:0007275 GO:0007623 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009416 GO:0009628 GO:0009648 GO:0009651 GO:0009719 GO:0009723 GO:0009725 GO:0009733 GO:0009737 GO:0009739 GO:0009751 GO:0009753 GO:0009791 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010228 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0014070 GO:0016043 GO:0016070 GO:0016569 GO:0016570 GO:0016573 GO:0018130 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019219 GO:0019222 GO:0019438 GO:0019538 GO:0022414 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0032774 GO:0032922 GO:0033993 GO:0034641 GO:0034645 GO:0034654 GO:0036211 GO:0042221 GO:0042493 GO:0042752 GO:0042753 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043543 GO:0043565 GO:0043966 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0046677 GO:0046686 GO:0048511 GO:0048518 GO:0048522 GO:0048573 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0060255 GO:0061458 GO:0065007 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0097305 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901576 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141
PFAM: PF00249.34

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0116590	XP_024634476.1	96.309	298	5	1	1	292	1	298	0.0	594

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0116590	sp\|Q8RWU3\|RVE8_ARATH	67.050	261	73	4	21	269	17	276	8.90e-123	355

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0116590	A0A072VW35	96.309	298	5	1	1	292	1	298	0.0	594

TFs/TRs:

Gene ID	Type	Classification
Msa0116590	TF	MYB-related

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0026280	Msa0116590	0.993568	1.205231e-200	-8.615850e-47
Msa0074140	Msa0116590	0.958449	2.291859e-116	-8.615850e-47
Msa0074180	Msa0116590	0.961773	4.306918e-120	-8.615850e-47
Msa0116590	Msa0223780	0.809096	2.239853e-50	-8.615850e-47
Msa0116590	Msa0264960	0.802121	6.518388e-49	-8.615850e-47
Msa0116590	Msa0303010	0.801835	7.466238e-49	-8.615850e-47
Msa0116590	Msa0350070	0.818740	1.674137e-52	-8.615850e-47
Msa0116590	Msa0396640	0.821647	3.613077e-53	-8.615850e-47
Msa0116590	Msa0415950	0.875253	3.564122e-68	-8.615850e-47
Msa0116590	Msa0444170	0.823270	1.515914e-53	-8.615850e-47
Msa0116590	Msa0448980	0.819858	9.311155e-53	-8.615850e-47
Msa0116590	Msa0480250	0.870487	1.405809e-66	-8.615850e-47
Msa0116590	Msa0491730	0.835088	2.056925e-56	-8.615850e-47
Msa0116590	Msa0497160	0.838627	2.569990e-57	-8.615850e-47
Msa0116590	Msa0508080	0.827831	1.258884e-54	-8.615850e-47
Msa0116590	Msa0512360	-0.814414	1.559725e-51	-8.615850e-47
Msa0116590	Msa0578650	-0.800956	1.129690e-48	-8.615850e-47
Msa0116590	Msa0689940	0.876180	1.713642e-68	-8.615850e-47
Msa0116590	Msa0758300	0.806147	9.474662e-50	-8.615850e-47
Msa0116590	Msa0792480	0.868397	6.730860e-66	-8.615850e-47
Msa0116590	Msa0896380	0.842962	1.876820e-58	-8.615850e-47
Msa0116590	Msa0961580	0.846208	2.509967e-59	-8.615850e-47
Msa0116590	Msa1009940	0.822447	2.357962e-53	-8.615850e-47
Msa0116590	Msa1130820	0.818552	1.846588e-52	-8.615850e-47
Msa0116590	Msa1186960	0.844131	9.141216e-59	-8.615850e-47
Msa0116590	Msa1321760	0.806240	9.055735e-50	-8.615850e-47
Msa0116590	Msa1406670	0.818764	1.653323e-52	-8.615850e-47
Msa0116590	Msa1448870	0.819137	1.360229e-52	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0116590	MtrunA17_Chr1g0181771	96.309	298	5	1	1	292	1	298	0.0	594
Msa0116590	MtrunA17_Chr8g0348391	55.469	256	92	5	35	269	52	306	7.00e-86	260
Msa0116590	MtrunA17_Chr6g0469431	64.384	146	41	4	17	153	18	161	3.69e-56	181
Msa0116590	MtrunA17_Chr6g0481061	57.843	102	35	1	28	121	38	139	7.90e-26	106
Msa0116590	MtrunA17_Chr3g0109791	59.140	93	30	1	36	120	46	138	1.11e-25	104
Msa0116590	MtrunA17_Chr5g0433851	61.972	71	27	0	28	98	24	94	4.99e-25	103
Msa0116590	MtrunA17_Chr7g0276421	54.054	74	34	0	28	101	7	80	5.53e-23	99.0
Msa0116590	MtrunA17_Chr6g0469441	68.519	54	17	0	206	259	24	77	1.23e-21	87.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0116590	AT3G09600.1	67.050	261	73	4	21	269	17	276	9.04e-124	355
Msa0116590	AT3G09600.7	67.050	261	73	4	21	269	17	276	9.04e-124	355
Msa0116590	AT3G09600.2	66.541	266	70	5	21	274	17	275	5.82e-121	348
Msa0116590	AT3G09600.6	66.541	266	70	5	21	274	17	275	5.82e-121	348
Msa0116590	AT3G09600.4	68.526	251	66	4	21	259	17	266	6.04e-121	348
Msa0116590	AT5G02840.3	64.706	255	71	5	30	267	31	283	4.99e-111	323
Msa0116590	AT5G02840.1	62.452	261	79	5	30	273	31	289	3.53e-109	318
Msa0116590	AT5G02840.2	62.452	261	79	5	30	273	31	289	3.53e-109	318
Msa0116590	AT3G09600.3	65.899	217	61	4	65	269	5	220	3.90e-98	288
Msa0116590	AT3G09600.8	65.899	217	61	4	65	269	5	220	3.90e-98	288
Msa0116590	AT5G02840.4	63.913	230	64	5	30	242	31	258	5.59e-96	284
Msa0116590	AT5G02840.5	63.478	230	65	5	30	242	31	258	1.87e-95	283
Msa0116590	AT3G09600.5	65.315	222	58	5	65	274	5	219	4.53e-95	280
Msa0116590	AT3G09600.9	65.315	222	58	5	65	274	5	219	4.53e-95	280
Msa0116590	AT5G52660.1	54.198	262	109	3	19	269	44	305	1.25e-86	262
Msa0116590	AT5G52660.2	52.471	263	113	3	19	269	44	306	8.89e-86	260
Msa0116590	AT1G01520.1	55.906	254	94	6	26	269	40	285	5.36e-85	256
Msa0116590	AT4G01280.2	52.593	270	109	7	17	268	29	297	3.83e-84	255
Msa0116590	AT4G01280.1	52.045	269	111	7	17	268	29	296	6.33e-83	252
Msa0116590	AT1G01520.3	56.967	244	87	6	26	259	40	275	1.02e-82	251
Msa0116590	AT1G01520.2	55.507	227	83	6	26	242	40	258	7.44e-72	222
Msa0116590	AT1G01520.4	55.507	227	83	6	26	242	40	258	7.44e-72	222
Msa0116590	AT5G17300.1	55.000	100	37	1	29	120	37	136	1.68e-27	110
Msa0116590	AT5G37260.1	56.701	97	38	1	28	120	17	113	1.80e-26	105
Msa0116590	AT1G01520.5	71.429	63	18	0	207	269	139	201	2.48e-26	103
Msa0116590	AT1G01060.8	36.313	179	100	4	26	193	3	178	2.91e-25	105
Msa0116590	AT1G01060.2	36.313	179	100	4	26	193	3	178	2.91e-25	105
Msa0116590	AT1G01060.3	36.313	179	100	4	26	193	3	178	2.91e-25	105
Msa0116590	AT1G01060.1	36.313	179	100	4	26	193	3	178	2.91e-25	105
Msa0116590	AT1G01060.7	36.313	179	100	4	26	193	3	178	2.91e-25	105
Msa0116590	AT1G18330.1	55.319	94	34	2	36	121	39	132	1.96e-24	101
Msa0116590	AT1G01060.4	51.250	80	39	0	26	105	3	82	2.01e-24	103
Msa0116590	AT3G10113.1	55.319	94	34	2	36	121	54	147	3.95e-24	100
Msa0116590	AT1G18330.2	55.319	94	34	2	36	121	65	158	3.96e-24	100
Msa0116590	AT2G46830.1	59.722	72	29	0	26	97	3	74	2.12e-23	100

Find 99 sgRNAs with CRISPR-Local

Find 706 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTTTACACATGTGGCATATT+TGG	0.134325	1_3:-35665547	None:intergenic
CTTACAATGGGATCAAAATT+AGG	0.151868	1_3:-35663109	None:intergenic
CATAATAGAAACTAACTAAT+TGG	0.195892	1_3:-35656836	None:intergenic
CTACCAGCATCCATTGCTTT+TGG	0.209435	1_3:+35657961	Msa0116590:intron
TTGTTATGGCATAATGTTAA+TGG	0.252539	1_3:+35665473	Msa0116590:three_prime_UTR
CCGGACTTTGCTGAAGTTTA+CGG	0.260906	1_3:+35658718	Msa0116590:CDS
TGAGTTAGAATTAGAGTTCA+TGG	0.279860	1_3:-35656884	None:intergenic
CTCACAGTTTCAAAGTTTAT+AGG	0.310240	1_3:-35658805	None:intergenic
TGGCTCTAAAACAGTTATTC+AGG	0.322186	1_3:+35657175	Msa0116590:CDS
CTTGACTTGGTAATTGTGTA+AGG	0.342024	1_3:-35656973	None:intergenic
TCACAGTTTCAAAGTTTATA+GGG	0.345459	1_3:-35658804	None:intergenic
ACGATATTTAACAGGTTTGC+CGG	0.354143	1_3:+35658699	Msa0116590:intron
ATTGTTATATTGCTCTGATT+TGG	0.364135	1_3:+35665411	Msa0116590:three_prime_UTR
TTACAATGGGATCAAAATTA+GGG	0.364435	1_3:-35663108	None:intergenic
CTAGTTGTTGTAGTTGTTGT+TGG	0.376561	1_3:-35656916	None:intergenic
TAACACTTCTACAGTTAGAT+TGG	0.377184	1_3:+35665080	Msa0116590:intron
TATTCAGATTTGATAGAGAT+TGG	0.391995	1_3:+35657132	Msa0116590:intron
TTCTTAAAGGTTCAAAAGAA+TGG	0.393543	1_3:+35657347	Msa0116590:CDS
AGACATACCCTGCAGGTAGA+AGG	0.398065	1_3:-35657999	None:intergenic
TGCACATGGCCGTTTGTATC+CGG	0.400201	1_3:-35658763	None:intergenic
AGCTCAATAATCTAATGAAA+AGG	0.409526	1_3:-35665596	None:intergenic
GGATGAATAGCTTTGCGCTT+AGG	0.413895	1_3:-35657398	None:intergenic
ACTAGTGGTGGAGATGCTTC+TGG	0.418390	1_3:+35656934	Msa0116590:CDS
GTTGGTGAACTATGAGTTGC+TGG	0.425901	1_3:-35665362	None:intergenic
GCTGAAGTTTACGGTTTCAT+TGG	0.426347	1_3:+35658727	Msa0116590:CDS
GATGAACTCAACAATCTTCA+AGG	0.432102	1_3:+35658060	Msa0116590:CDS
TTAGCTGACATTGGATCAAA+GGG	0.440291	1_3:+35658219	Msa0116590:intron
TGTGCAGAAGCTGAAGGAAA+TGG	0.443024	1_3:+35658780	Msa0116590:CDS
TTGACAACTTGTGTTCTGTT+TGG	0.443810	1_3:+35656773	Msa0116590:five_prime_UTR
ATAATAGAAACTAACTAATT+GGG	0.448680	1_3:-35656835	None:intergenic
ACACAAAATCCCGTGATTCA+TGG	0.453178	1_3:+35658318	Msa0116590:CDS
CTACGGTGATTCTGATGAAT+GGG	0.456757	1_3:+35656682	Msa0116590:five_prime_UTR
TAGAATTAGAGTTCATGGTT+TGG	0.460644	1_3:-35656879	None:intergenic
CTACTTTGCTAGTGCTCAAG+TGG	0.471610	1_3:-35664975	None:intergenic
TTTACTGATTTAGCTGACAT+TGG	0.472761	1_3:+35658210	Msa0116590:intron
ACACTCCCATGCCTAACTTC+TGG	0.472837	1_3:-35665137	None:intergenic
TGCGTTGGTATTTGAGAAGT+AGG	0.483111	1_3:-35658291	None:intergenic
TTTCCTTCAGCTTCTGCACA+TGG	0.485443	1_3:-35658777	None:intergenic
ATGACAACAGTTACATTCAC+TGG	0.485686	1_3:-35665194	None:intergenic
CCATGCCTAACTTCTGGTTA+AGG	0.485901	1_3:-35665131	None:intergenic
ACTACGGTGATTCTGATGAA+TGG	0.486932	1_3:+35656681	Msa0116590:five_prime_UTR
AACAATCTTCAAGGAAATGA+AGG	0.487995	1_3:+35658069	Msa0116590:CDS
TTGCGCTTAGGACGAGGAGG+AGG	0.489119	1_3:-35657386	None:intergenic
ATCAGCAACAGCGGTCTTAG+TGG	0.492479	1_3:+35658243	Msa0116590:CDS
GAACTCTAATTCTAACTCAA+TGG	0.493422	1_3:+35656888	Msa0116590:CDS
GCTCAATAATCTAATGAAAA+GGG	0.493803	1_3:-35665595	None:intergenic
GCAAATACCCTTCTACCTGC+AGG	0.497509	1_3:+35657991	Msa0116590:CDS
ACCTGCAGGGTATGTCTCGT+GGG	0.505026	1_3:+35658005	Msa0116590:CDS
CATGCTGATGAATACTTGTC+AGG	0.511561	1_3:+35658038	Msa0116590:CDS
AAATTGAATTATGAAATGTT+CGG	0.517235	1_3:+35656736	Msa0116590:five_prime_UTR
TACCTGCAGGGTATGTCTCG+TGG	0.522585	1_3:+35658004	Msa0116590:CDS
AGTTGCACTCAGCTGTAAAG+TGG	0.529497	1_3:+35665167	Msa0116590:three_prime_UTR
TTTAGCTGACATTGGATCAA+AGG	0.530841	1_3:+35658218	Msa0116590:intron
CCGTAAACTTCAGCAAAGTC+CGG	0.533484	1_3:-35658718	None:intergenic
GCGTTGGTATTTGAGAAGTA+GGG	0.533606	1_3:-35658290	None:intergenic
AGACCAGCTTTCTCTTGACT+TGG	0.533707	1_3:-35656986	None:intergenic
AGAAACTAACTAATTGGGTA+TGG	0.541243	1_3:-35656830	None:intergenic
TGGAGATGCTTCTGGTAAGA+AGG	0.544373	1_3:+35656942	Msa0116590:CDS
CTTAACCAGAAGTTAGGCAT+GGG	0.549145	1_3:+35665132	Msa0116590:three_prime_UTR
TACTATGACTATTCTTGCTG+TGG	0.551136	1_3:-35665223	None:intergenic
CCTTAACCAGAAGTTAGGCA+TGG	0.552640	1_3:+35665131	Msa0116590:three_prime_UTR
GAGCAATATAACAATAGCTA+TGG	0.552705	1_3:-35665403	None:intergenic
CAAACATGGATGGAAGATTG+AGG	0.557545	1_3:+35665104	Msa0116590:three_prime_UTR
ATAGCTTTGCGCTTAGGACG+AGG	0.563263	1_3:-35657392	None:intergenic
TTCAAAGTCGGTAACTCGGT+TGG	0.584191	1_3:-35665380	None:intergenic
GACATACCCTGCAGGTAGAA+GGG	0.588018	1_3:-35657998	None:intergenic
GGACAGTATTATTCTGTCTG+TGG	0.589210	1_3:+35656651	Msa0116590:five_prime_UTR
TGCAGTGATAACTATAGTGA+TGG	0.589386	1_3:-35656801	None:intergenic
TTACCAAGTCAAGAGAAAGC+TGG	0.591540	1_3:+35656983	Msa0116590:CDS
TGCCGAAGAGCCAAAAGCAA+TGG	0.592704	1_3:-35657971	None:intergenic
GACAGTATTATTCTGTCTGT+GGG	0.596269	1_3:+35656652	Msa0116590:five_prime_UTR
ACAACTACAACAACTAGTGG+TGG	0.601385	1_3:+35656922	Msa0116590:CDS
GATGAGAATAACGATGCAGT+AGG	0.601883	1_3:+35664908	Msa0116590:CDS
ACTTCTCAAATACCAACGCA+AGG	0.604376	1_3:+35658294	Msa0116590:CDS
CAAATACCCTTCTACCTGCA+GGG	0.604923	1_3:+35657992	Msa0116590:CDS
ATGGTTCAAAGTCGGTAACT+CGG	0.604982	1_3:-35665384	None:intergenic
AAAGTAGCAATATGTTGACT+TGG	0.608926	1_3:+35664991	Msa0116590:three_prime_UTR
ACAGTTAGATTGGACAAACA+TGG	0.611947	1_3:+35665090	Msa0116590:intron
TGTCTGTGGGCACAACACTA+CGG	0.612371	1_3:+35656665	Msa0116590:five_prime_UTR
TGAAAAGGGTCATTTCGCCC+AGG	0.612521	1_3:-35665581	None:intergenic
CGGCCATGTGCAGAAGCTGA+AGG	0.613903	1_3:+35658774	Msa0116590:CDS
CAATAGCTATGGTTCAAAGT+CGG	0.614980	1_3:-35665392	None:intergenic
AGTTTCTATTATGTTCTCTG+TGG	0.620410	1_3:+35656846	Msa0116590:exon
TGCGCTTAGGACGAGGAGGA+GGG	0.622142	1_3:-35657385	None:intergenic
CAGACGATTACCATGAATCA+CGG	0.628602	1_3:-35658328	None:intergenic
AGACGATTACCATGAATCAC+GGG	0.628967	1_3:-35658327	None:intergenic
AGTGATAACTATAGTGATGG+AGG	0.633179	1_3:-35656798	None:intergenic
TCCCACGAGACATACCCTGC+AGG	0.633438	1_3:-35658006	None:intergenic
TTAGATTGGACAAACATGGA+TGG	0.635269	1_3:+35665094	Msa0116590:three_prime_UTR
CTGACAAGTATTCATCAGCA+TGG	0.637093	1_3:-35658037	None:intergenic
ACAACAACTACAACAACTAG+TGG	0.647197	1_3:+35656919	Msa0116590:CDS
GGCTAGACAAGTTGACAGTG+AGG	0.653452	1_3:-35663087	None:intergenic
AAAGTGTGACTTTACACATG+TGG	0.657504	1_3:-35665556	None:intergenic
CTTCTCAAATACCAACGCAA+GGG	0.669437	1_3:+35658295	Msa0116590:CDS
TCAAAGGGGATCAGCAACAG+CGG	0.674075	1_3:+35658234	Msa0116590:CDS
GTGTTGAAGATACTAATACA+AGG	0.674684	1_3:+35658265	Msa0116590:CDS
GCTTTGCGCTTAGGACGAGG+AGG	0.703477	1_3:-35657389	None:intergenic
TAGCTGACATTGGATCAAAG+GGG	0.749798	1_3:+35658220	Msa0116590:intron
TGTGGTGTATATGAAACGTG+AGG	0.781020	1_3:+35656630	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTTATTAAAAAATAATTTAA+TGG	-	chr1_3:35664600-35664619	None:intergenic	0.0%
!!	TTATGAATAAATTAAATAAG+AGG	+	chr1_3:35663317-35663336	Msa0116590:intron	10.0%
!!	TTAATAAAAATATGAAGAAA+AGG	+	chr1_3:35664612-35664631	Msa0116590:intron	10.0%
!!!	AATTTTCTGTATAATATTTT+AGG	+	chr1_3:35665645-35665664	Msa0116590:three_prime_UTR	10.0%
!	GGGGGGGGGGGGGGGGGGGG+GGG	-	chr1_3:35662895-35662914	None:intergenic	100.0%
!	GGGGGGGGGGGGGGGGGGGG+GGG	-	chr1_3:35662895-35662914	None:intergenic	100.0%
!	GGGGGGGGGGGGGGGGGGGG+GGG	-	chr1_3:35662895-35662914	None:intergenic	100.0%
!	GGGGGGGGGGGGGGGGGGGG+GGG	-	chr1_3:35662895-35662914	None:intergenic	100.0%
!	GGGGGGGGGGGGGGGGGGGG+GGG	-	chr1_3:35662895-35662914	None:intergenic	100.0%
!	GGGGGGGGGGGGGGGGGGGG+GGG	-	chr1_3:35662895-35662914	None:intergenic	100.0%
!	GGGGGGGGGGGGGGGGGGGG+GGG	-	chr1_3:35662895-35662914	None:intergenic	100.0%
!	GGGGGGGGGGGGGGGGGGGG+GGG	-	chr1_3:35662895-35662914	None:intergenic	100.0%
!	GGGGGGGGGGGGGGGGGGGG+GGG	-	chr1_3:35662895-35662914	None:intergenic	100.0%
!	GGGGGGGGGGGGGGGGGGGG+GGG	-	chr1_3:35662895-35662914	None:intergenic	100.0%
!	GGGGGGGGGGGGGGGGGGGG+GGG	-	chr1_3:35662895-35662914	None:intergenic	100.0%
!	GGGGGGGGGGGGGGGGGGGG+GGG	-	chr1_3:35662895-35662914	None:intergenic	100.0%
!!	AAATTGAATTATGAAATGTT+CGG	+	chr1_3:35656736-35656755	Msa0116590:five_prime_UTR	15.0%
!!	ATAATAGAAACTAACTAATT+GGG	-	chr1_3:35656838-35656857	None:intergenic	15.0%
!!	ATATATTTGAAAACAAATTG+TGG	+	chr1_3:35657607-35657626	Msa0116590:intron	15.0%
!!	GTTTATATTATATGATACTA+CGG	-	chr1_3:35658416-35658435	None:intergenic	15.0%
!!	AAATTGAATCATTAAAAACA+CGG	+	chr1_3:35659441-35659460	Msa0116590:intron	15.0%
!!	CTTATTAATTATGAGTTTAT+CGG	-	chr1_3:35660490-35660509	None:intergenic	15.0%
!!!	AAAACATGATTTGAAATTAA+GGG	+	chr1_3:35660748-35660767	Msa0116590:intron	15.0%
!!	CTTATTAATTATGAGTTTAT+CGG	-	chr1_3:35660490-35660509	None:intergenic	15.0%
!!!	AAAACATGATTTGAAATTAA+GGG	+	chr1_3:35660748-35660767	Msa0116590:intron	15.0%
!!!	TATATAGTTTTGTAACATAT+TGG	+	chr1_3:35663157-35663176	Msa0116590:intron	15.0%
!!!	TTTTAGTTTTTCAACTAATA+GGG	-	chr1_3:35663451-35663470	None:intergenic	15.0%
!!!	ATTTTAGTTTTTCAACTAAT+AGG	-	chr1_3:35663452-35663471	None:intergenic	15.0%
!!!	GAAAAACTAAAATAGTTTTT+AGG	+	chr1_3:35663459-35663478	Msa0116590:intron	15.0%
!!	CATAATAGAAACTAACTAAT+TGG	-	chr1_3:35656839-35656858	None:intergenic	20.0%
!!	AAAGAATGATATAAGATTGA+AGG	-	chr1_3:35657067-35657086	None:intergenic	20.0%
!!	AAAAAAAAAGAGTAAAGACA+TGG	-	chr1_3:35657213-35657232	None:intergenic	20.0%
!!!	AACCTTTAAGAAGTATTTTT+GGG	-	chr1_3:35657339-35657358	None:intergenic	20.0%
!!!	TTTTCTTTTCTCTTTTTACT+TGG	+	chr1_3:35657464-35657483	Msa0116590:intron	20.0%
!!	AATATATACATCGAAAATTG+TGG	-	chr1_3:35657594-35657613	None:intergenic	20.0%
!!!	TATTTTGACACAAATTTAAC+TGG	-	chr1_3:35657863-35657882	None:intergenic	20.0%
!!	TCATATAACATAATAAGTAG+TGG	-	chr1_3:35658189-35658208	None:intergenic	20.0%
!!!	TTAAGTTTTGAAACAATACT+CGG	+	chr1_3:35658368-35658387	Msa0116590:intron	20.0%
!!	ACTTAGCTATATAATCAAAT+AGG	+	chr1_3:35658900-35658919	Msa0116590:intron	20.0%
!!!	GTTTTTAATGATTCAATTTG+CGG	-	chr1_3:35659440-35659459	None:intergenic	20.0%
!!!	CAAAACATGATTTGAAATTA+AGG	+	chr1_3:35660747-35660766	Msa0116590:intron	20.0%
!!!	AAACATGATTTGAAATTAAG+GGG	+	chr1_3:35660749-35660768	Msa0116590:intron	20.0%
!!	ATAGCTTAACATTGAATAAT+AGG	+	chr1_3:35660943-35660962	Msa0116590:intron	20.0%
!!	TAGCTTAACATTGAATAATA+GGG	+	chr1_3:35660944-35660963	Msa0116590:intron	20.0%
!!	ATCAAATTAACCTCTAATAT+TGG	-	chr1_3:35661125-35661144	None:intergenic	20.0%
!!!	ATATTAGAGGTTAATTTGAT+AGG	+	chr1_3:35661125-35661144	Msa0116590:intron	20.0%
!!!	TATTAGAGGTTAATTTGATA+GGG	+	chr1_3:35661126-35661145	Msa0116590:intron	20.0%
!!!	ACATGTTAATTTTACTCTTT+TGG	+	chr1_3:35661250-35661269	Msa0116590:intron	20.0%
!!!	CATGTTAATTTTACTCTTTT+GGG	+	chr1_3:35661251-35661270	Msa0116590:intron	20.0%
!!	AAGCTATATATTTACACTAA+AGG	+	chr1_3:35661295-35661314	Msa0116590:intron	20.0%
!!	GAAATTATTATTCACTAATG+TGG	+	chr1_3:35661418-35661437	Msa0116590:intron	20.0%
!!!	CAAAACATGATTTGAAATTA+AGG	+	chr1_3:35660747-35660766	Msa0116590:intron	20.0%
!!!	AAACATGATTTGAAATTAAG+GGG	+	chr1_3:35660749-35660768	Msa0116590:intron	20.0%
!!	ATAGCTTAACATTGAATAAT+AGG	+	chr1_3:35660943-35660962	Msa0116590:intron	20.0%
!!	TAGCTTAACATTGAATAATA+GGG	+	chr1_3:35660944-35660963	Msa0116590:intron	20.0%
!!	ATCAAATTAACCTCTAATAT+TGG	-	chr1_3:35661125-35661144	None:intergenic	20.0%
!!!	ATATTAGAGGTTAATTTGAT+AGG	+	chr1_3:35661125-35661144	Msa0116590:intron	20.0%
!!!	TATTAGAGGTTAATTTGATA+GGG	+	chr1_3:35661126-35661145	Msa0116590:intron	20.0%
!!!	ACATGTTAATTTTACTCTTT+TGG	+	chr1_3:35661250-35661269	Msa0116590:intron	20.0%
!!!	CATGTTAATTTTACTCTTTT+GGG	+	chr1_3:35661251-35661270	Msa0116590:intron	20.0%
!!	AAGCTATATATTTACACTAA+AGG	+	chr1_3:35661295-35661314	Msa0116590:intron	20.0%
!!	GAAATTATTATTCACTAATG+TGG	+	chr1_3:35661418-35661437	Msa0116590:intron	20.0%
!!	GTTTGAACTTATAATATCAA+AGG	-	chr1_3:35662588-35662607	None:intergenic	20.0%
!!	TTGATATTGAAACTTACAAT+GGG	-	chr1_3:35663124-35663143	None:intergenic	20.0%
!!	ATTGATATTGAAACTTACAA+TGG	-	chr1_3:35663125-35663144	None:intergenic	20.0%
!!	GAAAACAAAATAAACTTTCT+GGG	-	chr1_3:35663183-35663202	None:intergenic	20.0%
!!	TGAAAACAAAATAAACTTTC+TGG	-	chr1_3:35663184-35663203	None:intergenic	20.0%
!!	TTCATAAATATAGTGACTAT+GGG	-	chr1_3:35663304-35663323	None:intergenic	20.0%
!!	ATTCATAAATATAGTGACTA+TGG	-	chr1_3:35663305-35663324	None:intergenic	20.0%
!!!	TTTAGTTTTTCAACTAATAG+GGG	-	chr1_3:35663450-35663469	None:intergenic	20.0%
!	TATTCAGATTTGATAGAGAT+TGG	+	chr1_3:35657132-35657151	Msa0116590:intron	25.0%
!!	AAGAAGATTGAAGATTTTGT+TGG	+	chr1_3:35657155-35657174	Msa0116590:CDS	25.0%
!!!	GAACCTTTAAGAAGTATTTT+TGG	-	chr1_3:35657340-35657359	None:intergenic	25.0%
!	TTCTTAAAGGTTCAAAAGAA+TGG	+	chr1_3:35657347-35657366	Msa0116590:CDS	25.0%
!	GATGAACAATATGTAAAACA+AGG	+	chr1_3:35657530-35657549	Msa0116590:intron	25.0%
!	AATACAATTTGAGTGATCAA+GGG	+	chr1_3:35657679-35657698	Msa0116590:intron	25.0%
!	ACAAAAAGTAGCAATTGTTA+AGG	-	chr1_3:35657918-35657937	None:intergenic	25.0%
!!	TTAAGTTGTGAAACAATACT+AGG	+	chr1_3:35658514-35658533	Msa0116590:intron	25.0%
!	ATATAAAAAGTTGCATGCAT+AGG	+	chr1_3:35658543-35658562	Msa0116590:intron	25.0%
!!!	TCATTTTGACGATATTTAAC+AGG	+	chr1_3:35658691-35658710	Msa0116590:intron	25.0%
!	TCACAGTTTCAAAGTTTATA+GGG	-	chr1_3:35658807-35658826	None:intergenic	25.0%
!!!	ATATCGGTTGTTTTTTTTTC+TGG	-	chr1_3:35659150-35659169	None:intergenic	25.0%
!	TTTCTCTTTATCCAATCAAA+AGG	-	chr1_3:35660096-35660115	None:intergenic	25.0%
!	TGTCTTTGGATAATTCAAAT+TGG	-	chr1_3:35660223-35660242	None:intergenic	25.0%
!	AAATATTATCCTCCTCAAAA+TGG	-	chr1_3:35660553-35660572	None:intergenic	25.0%
!	ATGGTTTATTTGGATCATAA+AGG	-	chr1_3:35660644-35660663	None:intergenic	25.0%
!	TCCAAATAAACCATTTCTTA+AGG	+	chr1_3:35660650-35660669	Msa0116590:intron	25.0%
!	CCAAATAAACCATTTCTTAA+GGG	+	chr1_3:35660651-35660670	Msa0116590:intron	25.0%
!	TTAAAATACAACAGTTTCCA+AGG	+	chr1_3:35660680-35660699	Msa0116590:intron	25.0%
!!	ACTTATGATAACCTTTTTGA+AGG	+	chr1_3:35660713-35660732	Msa0116590:intron	25.0%
!!	AACATGATTTGAAATTAAGG+GGG	+	chr1_3:35660750-35660769	Msa0116590:intron	25.0%
!!!	GACATTCAAAATGGTTTTAA+TGG	-	chr1_3:35660822-35660841	None:intergenic	25.0%
!	GAATGTTCTTTAACATTATC+AGG	+	chr1_3:35660913-35660932	Msa0116590:intron	25.0%
!	ATAAGCTAATCAAAATGTCA+TGG	+	chr1_3:35661077-35661096	Msa0116590:intron	25.0%
!	TAAGCTAATCAAAATGTCAT+GGG	+	chr1_3:35661078-35661097	Msa0116590:intron	25.0%
!!	ATTAGAGGTTAATTTGATAG+GGG	+	chr1_3:35661127-35661146	Msa0116590:intron	25.0%
!!	GCTTTTTAGATGAAATTCAA+AGG	-	chr1_3:35661387-35661406	None:intergenic	25.0%
!	AATTTCATCTAAAAAGCTTG+AGG	+	chr1_3:35661390-35661409	Msa0116590:intron	25.0%
!	CTTCATCCTTTGATATTATA+AGG	+	chr1_3:35661481-35661500	Msa0116590:intron	25.0%
!	GTTTGACCTTATAATATCAA+AGG	-	chr1_3:35661490-35661509	None:intergenic	25.0%
!	ATCTTAAAAAACTACCTATG+AGG	-	chr1_3:35661532-35661551	None:intergenic	25.0%
!	AAATATTATCCTCCTCAAAA+TGG	-	chr1_3:35660553-35660572	None:intergenic	25.0%
!	ATGGTTTATTTGGATCATAA+AGG	-	chr1_3:35660644-35660663	None:intergenic	25.0%
!	TCCAAATAAACCATTTCTTA+AGG	+	chr1_3:35660650-35660669	Msa0116590:intron	25.0%
!	CCAAATAAACCATTTCTTAA+GGG	+	chr1_3:35660651-35660670	Msa0116590:intron	25.0%
!	TTAAAATACAACAGTTTCCA+AGG	+	chr1_3:35660680-35660699	Msa0116590:intron	25.0%
!!	ACTTATGATAACCTTTTTGA+AGG	+	chr1_3:35660713-35660732	Msa0116590:intron	25.0%
!!	AACATGATTTGAAATTAAGG+GGG	+	chr1_3:35660750-35660769	Msa0116590:intron	25.0%
!	GAATGTTCTTTAACATTATC+AGG	+	chr1_3:35660913-35660932	Msa0116590:intron	25.0%
!	ATAAGCTAATCAAAATGTCA+TGG	+	chr1_3:35661077-35661096	Msa0116590:intron	25.0%
!	TAAGCTAATCAAAATGTCAT+GGG	+	chr1_3:35661078-35661097	Msa0116590:intron	25.0%
!!	ATTAGAGGTTAATTTGATAG+GGG	+	chr1_3:35661127-35661146	Msa0116590:intron	25.0%
!	ATTATGCGAATAATTAACTC+TGG	+	chr1_3:35661328-35661347	Msa0116590:intron	25.0%
!!	GCTTTTTAGATGAAATTCAA+AGG	-	chr1_3:35661387-35661406	None:intergenic	25.0%
!	AATTTCATCTAAAAAGCTTG+AGG	+	chr1_3:35661390-35661409	Msa0116590:intron	25.0%
!	CATTATATGGGTGAATAAAT+TGG	-	chr1_3:35662844-35662863	None:intergenic	25.0%
!	CAATTTATTCACCCATATAA+TGG	+	chr1_3:35662842-35662861	Msa0116590:intron	25.0%
!	TTAACTAGGAAATCAAAATG+AGG	+	chr1_3:35662943-35662962	Msa0116590:intron	25.0%
!	TTACAATGGGATCAAAATTA+GGG	-	chr1_3:35663111-35663130	None:intergenic	25.0%
!!!	ATAGACCAACACTTATTTTT+TGG	+	chr1_3:35663821-35663840	Msa0116590:intron	25.0%
!	TTTCAGCTTATTTCGAATTA+GGG	-	chr1_3:35663853-35663872	None:intergenic	25.0%
!!	TTTTCAGCTTATTTCGAATT+AGG	-	chr1_3:35663854-35663873	None:intergenic	25.0%
!!!	AGTAGTTATGTTGATTTTCA+AGG	+	chr1_3:35665307-35665326	Msa0116590:three_prime_UTR	25.0%
!	ATTGTTATATTGCTCTGATT+TGG	+	chr1_3:35665411-35665430	Msa0116590:three_prime_UTR	25.0%
!!	AGAGACATAGATTTTTGTTA+TGG	+	chr1_3:35665459-35665478	Msa0116590:three_prime_UTR	25.0%
!	TTGTTATGGCATAATGTTAA+TGG	+	chr1_3:35665473-35665492	Msa0116590:three_prime_UTR	25.0%
!	ATGGTCTGTATCAAAAAATT+AGG	+	chr1_3:35665492-35665511	Msa0116590:three_prime_UTR	25.0%
!	GCTCAATAATCTAATGAAAA+GGG	-	chr1_3:35665598-35665617	None:intergenic	25.0%
!	AGCTCAATAATCTAATGAAA+AGG	-	chr1_3:35665599-35665618	None:intergenic	25.0%
!!!	CTGTATAATATTTTAGGAGT+TGG	+	chr1_3:35665651-35665670	Msa0116590:three_prime_UTR	25.0%
!	TCATTCATTCATCTTTTGCA+CGG	-	chr1_3:35656709-35656728	None:intergenic	30.0%
	AGAAACTAACTAATTGGGTA+TGG	-	chr1_3:35656833-35656852	None:intergenic	30.0%
	AGTTTCTATTATGTTCTCTG+TGG	+	chr1_3:35656846-35656865	Msa0116590:exon	30.0%
	TAGAATTAGAGTTCATGGTT+TGG	-	chr1_3:35656882-35656901	None:intergenic	30.0%
	TGAGTTAGAATTAGAGTTCA+TGG	-	chr1_3:35656887-35656906	None:intergenic	30.0%
	GAACTCTAATTCTAACTCAA+TGG	+	chr1_3:35656888-35656907	Msa0116590:CDS	30.0%
	GATATAAGATTGAAGGTAGA+TGG	-	chr1_3:35657060-35657079	None:intergenic	30.0%
	TGCCCAAAAATACTTCTTAA+AGG	+	chr1_3:35657334-35657353	Msa0116590:CDS	30.0%
!!!	TTTGTTGCTTTTTGTGGATA+AGG	-	chr1_3:35657422-35657441	None:intergenic	30.0%
!!!	CCATTTTTTGTTGCTTTTTG+TGG	-	chr1_3:35657428-35657447	None:intergenic	30.0%
	CCACAAAAAGCAACAAAAAA+TGG	+	chr1_3:35657425-35657444	Msa0116590:CDS	30.0%
	ATCATGCATATTTAGACATC+TGG	+	chr1_3:35657639-35657658	Msa0116590:intron	30.0%
	GAATACAATTTGAGTGATCA+AGG	+	chr1_3:35657678-35657697	Msa0116590:intron	30.0%
	AATGGACGATTAATTACGTT+TGG	-	chr1_3:35657798-35657817	None:intergenic	30.0%
	GATGATGAACTCAGTTTAAA+TGG	-	chr1_3:35657816-35657835	None:intergenic	30.0%
	AACAAATTTCTACGGCAATT+TGG	-	chr1_3:35657838-35657857	None:intergenic	30.0%
	AACTGGAGAACAAATTTCTA+CGG	-	chr1_3:35657846-35657865	None:intergenic	30.0%
	AACAATCTTCAAGGAAATGA+AGG	+	chr1_3:35658069-35658088	Msa0116590:CDS	30.0%
!!	TTTACTGATTTAGCTGACAT+TGG	+	chr1_3:35658210-35658229	Msa0116590:intron	30.0%
	GTGTTGAAGATACTAATACA+AGG	+	chr1_3:35658265-35658284	Msa0116590:CDS	30.0%
	TGAGTTTATTGAAATCCTTG+CGG	+	chr1_3:35658439-35658458	Msa0116590:intron	30.0%
!	CATGCAACTTTTTATATGTG+AGG	-	chr1_3:35658540-35658559	None:intergenic	30.0%
	TGAGTTTATTGAAATCCTTG+AGG	+	chr1_3:35658439-35658458	Msa0116590:intron	30.0%
	CTCACAGTTTCAAAGTTTAT+AGG	-	chr1_3:35658808-35658827	None:intergenic	30.0%
!!!	TGTTTTTTTTTCTGGTTTGC+TGG	-	chr1_3:35659142-35659161	None:intergenic	30.0%
!!!	TTTTTTCTGTTTTTTGCTGC+TGG	-	chr1_3:35659191-35659210	None:intergenic	30.0%
	CAAAAAACAGAAAAAACCTG+AGG	+	chr1_3:35659195-35659214	Msa0116590:intron	30.0%
!!!	GTTTGTTTTAAGAATGGTGT+TGG	-	chr1_3:35659343-35659362	None:intergenic	30.0%
	TCCCAATGGACAAATAAATT+AGG	+	chr1_3:35659560-35659579	Msa0116590:intron	30.0%
	GCCTAATTTATTTGTCCATT+GGG	-	chr1_3:35659564-35659583	None:intergenic	30.0%
	CAATGGACAAATAAATTAGG+CGG	+	chr1_3:35659563-35659582	Msa0116590:intron	30.0%
!!	AAAGCCAAATTCACTTTTGA+GGG	+	chr1_3:35659732-35659751	Msa0116590:intron	30.0%
	AATACCCTCAAAAGTGAATT+TGG	-	chr1_3:35659739-35659758	None:intergenic	30.0%
	TTGGATAAAGAGAAAAGTCT+AGG	+	chr1_3:35660101-35660120	Msa0116590:intron	30.0%
!!	TTTGGTTTGTAAACCAAAAG+AGG	-	chr1_3:35660444-35660463	None:intergenic	30.0%
	GAGTTTATCGGAAGATAAAT+TGG	-	chr1_3:35660478-35660497	None:intergenic	30.0%
	CATAACTAGGAAAGTTTATG+AGG	+	chr1_3:35660527-35660546	Msa0116590:intron	30.0%
!	TTATATCGCTTCAAGTTACT+AGG	-	chr1_3:35660583-35660602	None:intergenic	30.0%
	ACTTTATTCTGCTATATGTG+TGG	+	chr1_3:35660616-35660635	Msa0116590:intron	30.0%
	CCCTTAAGAAATGGTTTATT+TGG	-	chr1_3:35660654-35660673	None:intergenic	30.0%
	TAAGACTTTCCCTTAAGAAA+TGG	-	chr1_3:35660663-35660682	None:intergenic	30.0%
!	CATAAGTTTTCTTCTTTCCT+TGG	-	chr1_3:35660700-35660719	None:intergenic	30.0%
	ATTAAGGGGGAAAAAAATAG+AGG	+	chr1_3:35660763-35660782	Msa0116590:intron	30.0%
	AGGACTTTATCATATCAAAG+TGG	+	chr1_3:35660783-35660802	Msa0116590:intron	30.0%
	AAAGCACATGACATTCAAAA+TGG	-	chr1_3:35660831-35660850	None:intergenic	30.0%
!	TATGATAACTTGCCTCAATA+AGG	+	chr1_3:35660999-35661018	Msa0116590:intron	30.0%
!	ATGATAACTTGCCTCAATAA+GGG	+	chr1_3:35661000-35661019	Msa0116590:intron	30.0%
!	TTAGAGGTTAATTTGATAGG+GGG	+	chr1_3:35661128-35661147	Msa0116590:intron	30.0%
	AAATTAACATGTGTTTCCCA+TGG	-	chr1_3:35661242-35661261	None:intergenic	30.0%
!	TTAACTCTGGAGAAACTATT+AGG	+	chr1_3:35661341-35661360	Msa0116590:intron	30.0%
!	CATTTTACAACTGTCTCTTA+GGG	+	chr1_3:35661450-35661469	Msa0116590:intron	30.0%
!	ATTTTACAACTGTCTCTTAG+GGG	+	chr1_3:35661451-35661470	Msa0116590:intron	30.0%
	CATAACTAGGAAAGTTTATG+AGG	+	chr1_3:35660527-35660546	Msa0116590:intron	30.0%
!	TTATATCGCTTCAAGTTACT+AGG	-	chr1_3:35660583-35660602	None:intergenic	30.0%
	ACTTTATTCTGCTATATGTG+TGG	+	chr1_3:35660616-35660635	Msa0116590:intron	30.0%
	CCCTTAAGAAATGGTTTATT+TGG	-	chr1_3:35660654-35660673	None:intergenic	30.0%
	TAAGACTTTCCCTTAAGAAA+TGG	-	chr1_3:35660663-35660682	None:intergenic	30.0%
!	CATAAGTTTTCTTCTTTCCT+TGG	-	chr1_3:35660700-35660719	None:intergenic	30.0%
!	ACATGATTTGAAATTAAGGG+GGG	+	chr1_3:35660751-35660770	Msa0116590:intron	30.0%
	AGGACTTTATCATATCAAAG+TGG	+	chr1_3:35660783-35660802	Msa0116590:intron	30.0%
!!!	GACATTCAAAATGGTTTTAG+TGG	-	chr1_3:35661920-35661939	None:intergenic	30.0%
	AAAGCACATGACATTCAAAA+TGG	-	chr1_3:35660831-35660850	None:intergenic	30.0%
!	TATGATAACTTGCCTCAATA+AGG	+	chr1_3:35660999-35661018	Msa0116590:intron	30.0%
!	ATGATAACTTGCCTCAATAA+GGG	+	chr1_3:35661000-35661019	Msa0116590:intron	30.0%
!	TTAGAGGTTAATTTGATAGG+GGG	+	chr1_3:35661128-35661147	Msa0116590:intron	30.0%
	AAATTAACATGTGTTTCCCA+TGG	-	chr1_3:35661242-35661261	None:intergenic	30.0%
!	TTAACTCTGGAGAAACTATT+AGG	+	chr1_3:35661341-35661360	Msa0116590:intron	30.0%
!	CATTTTACAACTGTCTCTTA+GGG	+	chr1_3:35661450-35661469	Msa0116590:intron	30.0%
!	ATTTTACAACTGTCTCTTAG+GGG	+	chr1_3:35661451-35661470	Msa0116590:intron	30.0%
!!	TGTTTTAAGCCTCTTAACAT+GGG	-	chr1_3:35662781-35662800	None:intergenic	30.0%
!!!	TTGTTTTAAGCCTCTTAACA+TGG	-	chr1_3:35662782-35662801	None:intergenic	30.0%
	GAAGAATAGGACCATTATAT+GGG	-	chr1_3:35662856-35662875	None:intergenic	30.0%
	AGAAGAATAGGACCATTATA+TGG	-	chr1_3:35662857-35662876	None:intergenic	30.0%
	AATATCAGATGCAGAAGAAT+AGG	-	chr1_3:35662869-35662888	None:intergenic	30.0%
	TATATTTGATGTTCTTGTGC+AGG	+	chr1_3:35663045-35663064	Msa0116590:intron	30.0%
	CTTACAATGGGATCAAAATT+AGG	-	chr1_3:35663112-35663131	None:intergenic	30.0%
	ATTCATTCCAAGTATCATTC+TGG	+	chr1_3:35663219-35663238	Msa0116590:intron	30.0%
	TTAGAAACCAGAATGATACT+TGG	-	chr1_3:35663229-35663248	None:intergenic	30.0%
	GTTTAGTGTGCTAACATATA+TGG	+	chr1_3:35663511-35663530	Msa0116590:intron	30.0%
	TTCTTGTGCATAACGTTTAT+AGG	-	chr1_3:35663563-35663582	None:intergenic	30.0%
	CTGATCCAAAAAATAAGTGT+TGG	-	chr1_3:35663829-35663848	None:intergenic	30.0%
	TAATCCCATTCTTGAGAATT+AGG	+	chr1_3:35663901-35663920	Msa0116590:intron	30.0%
	AATCCCATTCTTGAGAATTA+GGG	+	chr1_3:35663902-35663921	Msa0116590:intron	30.0%
	AAAGGCAATGAAGAAATCAA+TGG	+	chr1_3:35664234-35664253	Msa0116590:intron	30.0%
	AAGAAATCAATGGAGAAGAA+GGG	+	chr1_3:35664244-35664263	Msa0116590:intron	30.0%
!!	GTTTGTTGTCTTGAGAATTA+GGG	-	chr1_3:35664450-35664469	None:intergenic	30.0%
	TTCCAGTTAAGAAAGTTTCT+TGG	-	chr1_3:35664560-35664579	None:intergenic	30.0%
	AGCATCACTAACTCTATATT+CGG	-	chr1_3:35664752-35664771	None:intergenic	30.0%
!	AAAGTAGCAATATGTTGACT+TGG	+	chr1_3:35664991-35665010	Msa0116590:three_prime_UTR	30.0%
	TAACACTTCTACAGTTAGAT+TGG	+	chr1_3:35665080-35665099	Msa0116590:intron	30.0%
!!	GATTTTCAAGGTTCAAACTT+TGG	+	chr1_3:35665319-35665338	Msa0116590:three_prime_UTR	30.0%
	GAGCAATATAACAATAGCTA+TGG	-	chr1_3:35665406-35665425	None:intergenic	30.0%
!	AGCTCATTTTCATTATGAAG+AGG	+	chr1_3:35665615-35665634	Msa0116590:three_prime_UTR	30.0%
!	GCTCATTTTCATTATGAAGA+GGG	+	chr1_3:35665616-35665635	Msa0116590:three_prime_UTR	30.0%
	GACAGTATTATTCTGTCTGT+GGG	+	chr1_3:35656652-35656671	Msa0116590:five_prime_UTR	35.0%
	TTGACAACTTGTGTTCTGTT+TGG	+	chr1_3:35656773-35656792	Msa0116590:five_prime_UTR	35.0%
	AGTGATAACTATAGTGATGG+AGG	-	chr1_3:35656801-35656820	None:intergenic	35.0%
	TGCAGTGATAACTATAGTGA+TGG	-	chr1_3:35656804-35656823	None:intergenic	35.0%
	CTAGTTGTTGTAGTTGTTGT+TGG	-	chr1_3:35656919-35656938	None:intergenic	35.0%
	ACAACAACTACAACAACTAG+TGG	+	chr1_3:35656919-35656938	Msa0116590:CDS	35.0%
!!	CTTGACTTGGTAATTGTGTA+AGG	-	chr1_3:35656976-35656995	None:intergenic	35.0%
!!	TGGCTCTAAAACAGTTATTC+AGG	+	chr1_3:35657175-35657194	Msa0116590:CDS	35.0%
	CGTTGAACACTTGAAAATTG+TGG	+	chr1_3:35657719-35657738	Msa0116590:intron	35.0%
	GAAAATTGTGGCTAAGTACA+TGG	+	chr1_3:35657731-35657750	Msa0116590:intron	35.0%
!!!	TTTGTGTCACTTACCAGTTT+TGG	+	chr1_3:35657933-35657952	Msa0116590:intron	35.0%
	GATGAACTCAACAATCTTCA+AGG	+	chr1_3:35658060-35658079	Msa0116590:CDS	35.0%
	GGTATGCATAATGCATGTTA+TGG	+	chr1_3:35658090-35658109	Msa0116590:intron	35.0%
	TTGATGCCAATAGTCTAGAT+TGG	+	chr1_3:35658140-35658159	Msa0116590:intron	35.0%
	TTTAGCTGACATTGGATCAA+AGG	+	chr1_3:35658218-35658237	Msa0116590:intron	35.0%
	TTAGCTGACATTGGATCAAA+GGG	+	chr1_3:35658219-35658238	Msa0116590:intron	35.0%
!	GAAACAATTTTCTAGATGCG+AGG	-	chr1_3:35658394-35658413	None:intergenic	35.0%
	GTTTATTGAAATCCTTGAGG+TGG	+	chr1_3:35658592-35658611	Msa0116590:intron	35.0%
	CAAAATGACAGACAAAACAG+TGG	-	chr1_3:35658679-35658698	None:intergenic	35.0%
	ACGATATTTAACAGGTTTGC+CGG	+	chr1_3:35658699-35658718	Msa0116590:intron	35.0%
!!!	CATTGGAAGTGTTTTTGATC+CGG	+	chr1_3:35658744-35658763	Msa0116590:CDS	35.0%
!	GTTTTTGATCCGGATACAAA+CGG	+	chr1_3:35658754-35658773	Msa0116590:CDS	35.0%
!!	TGTTTGCTGTTATAACAGAC+GGG	-	chr1_3:35659111-35659130	None:intergenic	35.0%
!!	CTGTTTGCTGTTATAACAGA+CGG	-	chr1_3:35659112-35659131	None:intergenic	35.0%
	CATTCTTAAAACAAACACGC+CGG	+	chr1_3:35659347-35659366	Msa0116590:intron	35.0%
	ACAAATAAGAAGGTCCGTAT+CGG	-	chr1_3:35659521-35659540	None:intergenic	35.0%
	CGCCTAATTTATTTGTCCAT+TGG	-	chr1_3:35659565-35659584	None:intergenic	35.0%
!!	GAAAGCCAAATTCACTTTTG+AGG	+	chr1_3:35659731-35659750	Msa0116590:intron	35.0%
	TCCTTGTATAAGAAGTTGGA+GGG	-	chr1_3:35659879-35659898	None:intergenic	35.0%
	GAAGTCCTTGTATAAGAAGT+TGG	-	chr1_3:35659883-35659902	None:intergenic	35.0%
!!	TTGGGAGAATGACTTGTTAA+GGG	-	chr1_3:35659994-35660013	None:intergenic	35.0%
!!	TTTGGGAGAATGACTTGTTA+AGG	-	chr1_3:35659995-35660014	None:intergenic	35.0%
	TCATTCTCCCAAACAAAAAG+AGG	+	chr1_3:35660002-35660021	Msa0116590:intron	35.0%
	AATCAAAAGGAGGCTTATGT+GGG	-	chr1_3:35660083-35660102	None:intergenic	35.0%
	CTCTTTATCCAATCAAAAGG+AGG	-	chr1_3:35660093-35660112	None:intergenic	35.0%
!!!	AAATACGAGTTTTTGGGATG+TGG	-	chr1_3:35660162-35660181	None:intergenic	35.0%
	TTGATAGAAAAGTGGGGAAT+GGG	-	chr1_3:35660187-35660206	None:intergenic	35.0%
	TCCGAACTTGATAGAAAAGT+GGG	-	chr1_3:35660194-35660213	None:intergenic	35.0%
	TTCCGAACTTGATAGAAAAG+TGG	-	chr1_3:35660195-35660214	None:intergenic	35.0%
	TAAAGGTTGAGGATTACACT+TGG	-	chr1_3:35660280-35660299	None:intergenic	35.0%
	AGATAGGAATACTCTTTGGA+AGG	-	chr1_3:35660345-35660364	None:intergenic	35.0%
!!	TCCAAAGAGTATTCCTATCT+TGG	+	chr1_3:35660345-35660364	Msa0116590:intron	35.0%
	TCCAAGATAGGAATACTCTT+TGG	-	chr1_3:35660349-35660368	None:intergenic	35.0%
	AATGGAGGTTAATCCAAGAT+AGG	-	chr1_3:35660361-35660380	None:intergenic	35.0%
	GTTTGTAAACCAAAAGAGGA+TGG	-	chr1_3:35660440-35660459	None:intergenic	35.0%
	ATCGGAAGATAAATTGGTTG+AGG	-	chr1_3:35660472-35660491	None:intergenic	35.0%
!!	AAGTTTATGAGGCCATTTTG+AGG	+	chr1_3:35660538-35660557	Msa0116590:intron	35.0%
!!!	CTTTTTTTCCTGCTTATTCG+TGG	+	chr1_3:35660847-35660866	Msa0116590:intron	35.0%
	TAATCTAACCACGAATAAGC+AGG	-	chr1_3:35660858-35660877	None:intergenic	35.0%
!	GACTGACAGATTTCTGAAAA+TGG	-	chr1_3:35660891-35660910	None:intergenic	35.0%
	CATTGAATAATAGGGCTGAA+TGG	+	chr1_3:35660952-35660971	Msa0116590:intron	35.0%
	GCAAGTTATCATAAGCTACA+AGG	-	chr1_3:35660992-35661011	None:intergenic	35.0%
!	ATATTGGCCTAGGAAAAAAC+AGG	-	chr1_3:35661109-35661128	None:intergenic	35.0%
!	TTTTCCTAGGCCAATATTAG+AGG	+	chr1_3:35661112-35661131	Msa0116590:intron	35.0%
!	TTAACCTCTAATATTGGCCT+AGG	-	chr1_3:35661119-35661138	None:intergenic	35.0%
!	TAGAGGTTAATTTGATAGGG+GGG	+	chr1_3:35661129-35661148	Msa0116590:intron	35.0%
!!	AGCGAATTTGTTAGTAGCAT+AGG	+	chr1_3:35661154-35661173	Msa0116590:intron	35.0%
!!	ATGCTGAAGGAGTATTATGA+AGG	-	chr1_3:35661195-35661214	None:intergenic	35.0%
!	GTATTCTAGTGGTTTGAGTT+GGG	-	chr1_3:35661218-35661237	None:intergenic	35.0%
	TGTATTCTAGTGGTTTGAGT+TGG	-	chr1_3:35661219-35661238	None:intergenic	35.0%
	AAACCACTAGAATACACCAT+GGG	+	chr1_3:35661223-35661242	Msa0116590:intron	35.0%
	AGGCTCTTAAAGAGTCAATT+TGG	-	chr1_3:35661367-35661386	None:intergenic	35.0%
	TCATCTAAAAAGCTTGAGGA+AGG	+	chr1_3:35661394-35661413	Msa0116590:intron	35.0%
	CATCTAAAAAGCTTGAGGAA+GGG	+	chr1_3:35661395-35661414	Msa0116590:intron	35.0%
	ATCTAAAAAGCTTGAGGAAG+GGG	+	chr1_3:35661396-35661415	Msa0116590:intron	35.0%
	CCTAAGAGACAGTTGTAAAA+TGG	-	chr1_3:35661452-35661471	None:intergenic	35.0%
!	CCATTTTACAACTGTCTCTT+AGG	+	chr1_3:35661449-35661468	Msa0116590:intron	35.0%
!!	AAGTTTATGAGGCCATTTTG+AGG	+	chr1_3:35660538-35660557	Msa0116590:intron	35.0%
	TTAAGGGGGGAAAAAAATAG+AGG	+	chr1_3:35661861-35661880	Msa0116590:intron	35.0%
!!!	CTTTTTTTCCTGCTTATTCG+AGG	+	chr1_3:35660847-35660866	Msa0116590:intron	35.0%
	TAATCTAACCTCGAATAAGC+AGG	-	chr1_3:35661956-35661975	None:intergenic	35.0%
!	GACTGACAGATTTCTGAAAA+TGG	-	chr1_3:35660891-35660910	None:intergenic	35.0%
	CATTGAATAATAGGGCTGAA+TGG	+	chr1_3:35660952-35660971	Msa0116590:intron	35.0%
	GCAAGTTATCATAAGCTACA+AGG	-	chr1_3:35660992-35661011	None:intergenic	35.0%
!	ATATTGGCCTAGGAAAAAAC+AGG	-	chr1_3:35661109-35661128	None:intergenic	35.0%
!	TTTTCCTAGGCCAATATTAG+AGG	+	chr1_3:35661112-35661131	Msa0116590:intron	35.0%
!	TTAACCTCTAATATTGGCCT+AGG	-	chr1_3:35661119-35661138	None:intergenic	35.0%
!	TAGAGGTTAATTTGATAGGG+GGG	+	chr1_3:35661129-35661148	Msa0116590:intron	35.0%
!!	AGCGAATTTGTTAGTAGCAT+AGG	+	chr1_3:35661154-35661173	Msa0116590:intron	35.0%
!!	ATGCTGAAGGAGTATTATGA+AGG	-	chr1_3:35661195-35661214	None:intergenic	35.0%
!	GTATTCTAGTGGTTTGAGTT+GGG	-	chr1_3:35661218-35661237	None:intergenic	35.0%
	TGTATTCTAGTGGTTTGAGT+TGG	-	chr1_3:35661219-35661238	None:intergenic	35.0%
	AAACCACTAGAATACACCAT+GGG	+	chr1_3:35661223-35661242	Msa0116590:intron	35.0%
	AGGCTCTTAAAGAGTCAATT+TGG	-	chr1_3:35661367-35661386	None:intergenic	35.0%
	TCATCTAAAAAGCTTGAGGA+AGG	+	chr1_3:35661394-35661413	Msa0116590:intron	35.0%
	CATCTAAAAAGCTTGAGGAA+GGG	+	chr1_3:35661395-35661414	Msa0116590:intron	35.0%
	ATCTAAAAAGCTTGAGGAAG+GGG	+	chr1_3:35661396-35661415	Msa0116590:intron	35.0%
	CCTAAGAGACAGTTGTAAAA+TGG	-	chr1_3:35661452-35661471	None:intergenic	35.0%
!	CCATTTTACAACTGTCTCTT+AGG	+	chr1_3:35661449-35661468	Msa0116590:intron	35.0%
!	ATTTTCAAAAACTGCCCATG+AGG	-	chr1_3:35662630-35662649	None:intergenic	35.0%
	ACACTAATTCCCATGTTAAG+AGG	+	chr1_3:35662769-35662788	Msa0116590:intron	35.0%
	AGTTAATGCAGAAAAGAGGA+GGG	-	chr1_3:35662929-35662948	None:intergenic	35.0%
	TAGTTAATGCAGAAAAGAGG+AGG	-	chr1_3:35662930-35662949	None:intergenic	35.0%
!	TCCTCTTTTCTGCATTAACT+AGG	+	chr1_3:35662929-35662948	Msa0116590:intron	35.0%
	TCCTAGTTAATGCAGAAAAG+AGG	-	chr1_3:35662933-35662952	None:intergenic	35.0%
	ACTATGGGAAGACTTACATT+GGG	-	chr1_3:35663289-35663308	None:intergenic	35.0%
	AGTGTTTAATCCCTTGACTA+TGG	+	chr1_3:35663340-35663359	Msa0116590:intron	35.0%
	TAAACGCGCATAACGTTTAT+AGG	+	chr1_3:35663486-35663505	Msa0116590:intron	35.0%
	TAGCCCTAATTCTCAAGAAT+GGG	-	chr1_3:35663908-35663927	None:intergenic	35.0%
	TTAGCCCTAATTCTCAAGAA+TGG	-	chr1_3:35664407-35664426	None:intergenic	35.0%
	GTGAGTTGTCTTGAGAATTA+GGG	+	chr1_3:35663938-35663957	Msa0116590:intron	35.0%
!!!	AATCTAAGCTGGTTTTGTGA+TGG	+	chr1_3:35663999-35664018	Msa0116590:intron	35.0%
!!!	ATCTAAGCTGGTTTTGTGAT+GGG	+	chr1_3:35664000-35664019	Msa0116590:intron	35.0%
	GACATAGTAGATAACCTAGA+AGG	+	chr1_3:35664039-35664058	Msa0116590:intron	35.0%
	GGCACACAAGAAAAAAAACA+AGG	-	chr1_3:35664102-35664121	None:intergenic	35.0%
	TGCATGTTGATGCTGTAAAT+CGG	-	chr1_3:35664161-35664180	None:intergenic	35.0%
!	CCTTTCTCAAGAGTGTAAAT+CGG	-	chr1_3:35664219-35664238	None:intergenic	35.0%
	GAAGAAATCAATGGAGAAGA+AGG	+	chr1_3:35664243-35664262	Msa0116590:intron	35.0%
	CCTAATTGTAATCAAGGTCT+TGG	-	chr1_3:35664290-35664309	None:intergenic	35.0%
	CCAAGACCTTGATTACAATT+AGG	+	chr1_3:35664287-35664306	Msa0116590:intron	35.0%
	CTTCTGCCTAATTGTAATCA+AGG	-	chr1_3:35664296-35664315	None:intergenic	35.0%
!	GAAAAGGAGATTTTCTTCCT+CGG	+	chr1_3:35664323-35664342	Msa0116590:intron	35.0%
!	GTGGGTTTTCTTGAGAATTA+GGG	-	chr1_3:35664414-35664433	None:intergenic	35.0%
!!	GGTTTGTTGTCTTGAGAATT+AGG	-	chr1_3:35664451-35664470	None:intergenic	35.0%
	AATTCTCAAGACAACAAACC+AGG	+	chr1_3:35664451-35664470	Msa0116590:intron	35.0%
!!	TTAGCCTTAATTCTCGAGAA+TGG	+	chr1_3:35664479-35664498	Msa0116590:intron	35.0%
!	TAGCCTTAATTCTCGAGAAT+GGG	+	chr1_3:35664480-35664499	Msa0116590:intron	35.0%
	GTCCAAGAAACTTTCTTAAC+TGG	+	chr1_3:35664555-35664574	Msa0116590:intron	35.0%
	ACAGTTAGATTGGACAAACA+TGG	+	chr1_3:35665090-35665109	Msa0116590:intron	35.0%
	TTAGATTGGACAAACATGGA+TGG	+	chr1_3:35665094-35665113	Msa0116590:three_prime_UTR	35.0%
!	GTTTTCCTTAACCAGAAGTT+AGG	+	chr1_3:35665126-35665145	Msa0116590:three_prime_UTR	35.0%
	ATGACAACAGTTACATTCAC+TGG	-	chr1_3:35665197-35665216	None:intergenic	35.0%
	TACTATGACTATTCTTGCTG+TGG	-	chr1_3:35665226-35665245	None:intergenic	35.0%
	CAATAGCTATGGTTCAAAGT+CGG	-	chr1_3:35665395-35665414	None:intergenic	35.0%
	CTTTACACATGTGGCATATT+TGG	-	chr1_3:35665550-35665569	None:intergenic	35.0%
	AAAGTGTGACTTTACACATG+TGG	-	chr1_3:35665559-35665578	None:intergenic	35.0%
!	TGTAAAGTCACACTTTTACC+TGG	+	chr1_3:35665563-35665582	Msa0116590:three_prime_UTR	35.0%
!	GTAAAGTCACACTTTTACCT+GGG	+	chr1_3:35665564-35665583	Msa0116590:three_prime_UTR	35.0%
	GGACAGTATTATTCTGTCTG+TGG	+	chr1_3:35656651-35656670	Msa0116590:five_prime_UTR	40.0%
	ACTACGGTGATTCTGATGAA+TGG	+	chr1_3:35656681-35656700	Msa0116590:five_prime_UTR	40.0%
	CTACGGTGATTCTGATGAAT+GGG	+	chr1_3:35656682-35656701	Msa0116590:five_prime_UTR	40.0%
	ACAACTACAACAACTAGTGG+TGG	+	chr1_3:35656922-35656941	Msa0116590:CDS	40.0%
	TTACCAAGTCAAGAGAAAGC+TGG	+	chr1_3:35656983-35657002	Msa0116590:CDS	40.0%
!!!	ATCCATTGCTTTTGGCTCTT+CGG	+	chr1_3:35657969-35657988	Msa0116590:CDS	40.0%
	CTGACAAGTATTCATCAGCA+TGG	-	chr1_3:35658040-35658059	None:intergenic	40.0%
	CATGCTGATGAATACTTGTC+AGG	+	chr1_3:35658038-35658057	Msa0116590:CDS	40.0%
!	CAAGTTCCTTTAAGTTCAGC+TGG	-	chr1_3:35658166-35658185	None:intergenic	40.0%
	TAGCTGACATTGGATCAAAG+GGG	+	chr1_3:35658220-35658239	Msa0116590:intron	40.0%
!	GCGTTGGTATTTGAGAAGTA+GGG	-	chr1_3:35658293-35658312	None:intergenic	40.0%
!	TGCGTTGGTATTTGAGAAGT+AGG	-	chr1_3:35658294-35658313	None:intergenic	40.0%
	ACTTCTCAAATACCAACGCA+AGG	+	chr1_3:35658294-35658313	Msa0116590:CDS	40.0%
	CTTCTCAAATACCAACGCAA+GGG	+	chr1_3:35658295-35658314	Msa0116590:CDS	40.0%
	ACACAAAATCCCGTGATTCA+TGG	+	chr1_3:35658318-35658337	Msa0116590:CDS	40.0%
	AGACGATTACCATGAATCAC+GGG	-	chr1_3:35658330-35658349	None:intergenic	40.0%
	CAGACGATTACCATGAATCA+CGG	-	chr1_3:35658331-35658350	None:intergenic	40.0%
	GTTTATTGAAATCCTTGCGG+TGG	+	chr1_3:35658442-35658461	Msa0116590:intron	40.0%
	GCTGAAGTTTACGGTTTCAT+TGG	+	chr1_3:35658727-35658746	Msa0116590:CDS	40.0%
	CTCAGTAGTTACTTCTGTTG+AGG	-	chr1_3:35658875-35658894	None:intergenic	40.0%
	GAGACAAAACAAGAACCTAC+AGG	+	chr1_3:35658957-35658976	Msa0116590:intron	40.0%
	GAGTTTATCATGCATCCTGT+AGG	-	chr1_3:35658975-35658994	None:intergenic	40.0%
	GGTCTCTTTCTGTCTGATAT+CGG	-	chr1_3:35659166-35659185	None:intergenic	40.0%
	AAACAGAAAAAACCTGAGGC+TGG	+	chr1_3:35659199-35659218	Msa0116590:intron	40.0%
!!!	CTGTTTCCTGCTGTTTTTTG+CGG	-	chr1_3:35659236-35659255	None:intergenic	40.0%
!	TTAATGGAGCTGCTTTGGTA+AGG	-	chr1_3:35659297-35659316	None:intergenic	40.0%
	TACCAAAGCAGCTCCATTAA+CGG	+	chr1_3:35659297-35659316	Msa0116590:intron	40.0%
!!!	CGGCGTGTTTGTTTTAAGAA+TGG	-	chr1_3:35659349-35659368	None:intergenic	40.0%
	TGGATGTTGAGTCGTATGAA+GGG	-	chr1_3:35659374-35659393	None:intergenic	40.0%
	TGATTCAATTTGCGGAGTAG+CGG	-	chr1_3:35659432-35659451	None:intergenic	40.0%
	AAATCAACCGGTAACCGATA+CGG	+	chr1_3:35659504-35659523	Msa0116590:intron	40.0%
!	TATTTGTCCATTGGGAGTGT+TGG	-	chr1_3:35659556-35659575	None:intergenic	40.0%
	AAGATTGCGTTCTGTGTGAA+GGG	-	chr1_3:35659683-35659702	None:intergenic	40.0%
	TTTCAGACATGTGTTACCTC+CGG	-	chr1_3:35659715-35659734	None:intergenic	40.0%
	TCTATCATGAAGAAGCTTCC+AGG	+	chr1_3:35659758-35659777	Msa0116590:intron	40.0%
	GAGAACGCAACAACTTTAGA+CGG	+	chr1_3:35659780-35659799	Msa0116590:intron	40.0%
	GAACTATATCAGAGGAGCAA+GGG	-	chr1_3:35659839-35659858	None:intergenic	40.0%
	AGAACTATATCAGAGGAGCA+AGG	-	chr1_3:35659840-35659859	None:intergenic	40.0%
	ACCCTCCAACTTCTTATACA+AGG	+	chr1_3:35659875-35659894	Msa0116590:intron	40.0%
	GTCCTTGTATAAGAAGTTGG+AGG	-	chr1_3:35659880-35659899	None:intergenic	40.0%
	CTTGTTAAGGGAGTTGTATG+CGG	-	chr1_3:35659982-35660001	None:intergenic	40.0%
!!	GAGACGTCCTCTTTTTGTTT+GGG	-	chr1_3:35660012-35660031	None:intergenic	40.0%
!!	AGTGCAATTGGTCGTTTTCT+TGG	-	chr1_3:35660034-35660053	None:intergenic	40.0%
	TTAATACTCCGGAGTGCAAT+TGG	-	chr1_3:35660046-35660065	None:intergenic	40.0%
	CAATCAAAAGGAGGCTTATG+TGG	-	chr1_3:35660084-35660103	None:intergenic	40.0%
!	CACATAAGCCTCCTTTTGAT+TGG	+	chr1_3:35660082-35660101	Msa0116590:intron	40.0%
!	TGGGGCAAATACGAGTTTTT+GGG	-	chr1_3:35660168-35660187	None:intergenic	40.0%
!	ATGGGGCAAATACGAGTTTT+TGG	-	chr1_3:35660169-35660188	None:intergenic	40.0%
	TGATAGAAAAGTGGGGAATG+GGG	-	chr1_3:35660186-35660205	None:intergenic	40.0%
	CTTGATAGAAAAGTGGGGAA+TGG	-	chr1_3:35660188-35660207	None:intergenic	40.0%
	CCGAACTTGATAGAAAAGTG+GGG	-	chr1_3:35660193-35660212	None:intergenic	40.0%
!!	CCCCACTTTTCTATCAAGTT+CGG	+	chr1_3:35660190-35660209	Msa0116590:intron	40.0%
!!	TTCAAGTGTAGGGGTGTTAA+AGG	-	chr1_3:35660297-35660316	None:intergenic	40.0%
	AGTATGGCACTTCAAGTGTA+GGG	-	chr1_3:35660307-35660326	None:intergenic	40.0%
	AAGTATGGCACTTCAAGTGT+AGG	-	chr1_3:35660308-35660327	None:intergenic	40.0%
!	TAGGAATACTCTTTGGAAGG+AGG	-	chr1_3:35660342-35660361	None:intergenic	40.0%
!	AAAAGAGGATGGTGGTTTAG+GGG	-	chr1_3:35660429-35660448	None:intergenic	40.0%
!	CAAAAGAGGATGGTGGTTTA+GGG	-	chr1_3:35660430-35660449	None:intergenic	40.0%
	TGTAAACCAAAAGAGGATGG+TGG	-	chr1_3:35660437-35660456	None:intergenic	40.0%
	AAATTGGTTGAGGTGGAGTT+TGG	-	chr1_3:35660462-35660481	None:intergenic	40.0%
	GGAAGATAAATTGGTTGAGG+TGG	-	chr1_3:35660469-35660488	None:intergenic	40.0%
!!	TTTATGAGGCCATTTTGAGG+AGG	+	chr1_3:35660541-35660560	Msa0116590:intron	40.0%
!!	ACTGACTCGATCCTTCAAAA+AGG	-	chr1_3:35660727-35660746	None:intergenic	40.0%
	TCATATTCACGCCCTTATTG+AGG	-	chr1_3:35661014-35661033	None:intergenic	40.0%
	CTTATCTTGCTTCAACACAC+TGG	-	chr1_3:35661047-35661066	None:intergenic	40.0%
!	AGAGGTTAATTTGATAGGGG+GGG	+	chr1_3:35661130-35661149	Msa0116590:intron	40.0%
	TAGTAGCATAGGTCAAACTC+TGG	+	chr1_3:35661165-35661184	Msa0116590:intron	40.0%
!!	CTGAAGGAGTATTATGAAGG+AGG	-	chr1_3:35661192-35661211	None:intergenic	40.0%
	CAAACCACTAGAATACACCA+TGG	+	chr1_3:35661222-35661241	Msa0116590:intron	40.0%
	TTTCCCATGGTGTATTCTAG+TGG	-	chr1_3:35661229-35661248	None:intergenic	40.0%
	AAAAACTACCTATGAGGCGT+CGG	-	chr1_3:35661526-35661545	None:intergenic	40.0%
!!	TTTATGAGGCCATTTTGAGG+AGG	+	chr1_3:35660541-35660560	Msa0116590:intron	40.0%
!!	ACTGACTCGATCCTTCAAAA+AGG	-	chr1_3:35660727-35660746	None:intergenic	40.0%
	TCATATTCACGCCCTTATTG+AGG	-	chr1_3:35661014-35661033	None:intergenic	40.0%
	CTTATCTTGCTTCAACACAC+TGG	-	chr1_3:35661047-35661066	None:intergenic	40.0%
!	AGAGGTTAATTTGATAGGGG+GGG	+	chr1_3:35661130-35661149	Msa0116590:intron	40.0%
	TAGTAGCATAGGTCAAACTC+TGG	+	chr1_3:35661165-35661184	Msa0116590:intron	40.0%
!!	CTGAAGGAGTATTATGAAGG+AGG	-	chr1_3:35661192-35661211	None:intergenic	40.0%
	CAAACCACTAGAATACACCA+TGG	+	chr1_3:35661222-35661241	Msa0116590:intron	40.0%
	TTTCCCATGGTGTATTCTAG+TGG	-	chr1_3:35661229-35661248	None:intergenic	40.0%
	TTGCCAAACTGTCTTCACTA+AGG	+	chr1_3:35662810-35662829	Msa0116590:intron	40.0%
	TGCCAAACTGTCTTCACTAA+GGG	+	chr1_3:35662811-35662830	Msa0116590:intron	40.0%
	TTAATGCAGAAAAGAGGAGG+GGG	-	chr1_3:35662927-35662946	None:intergenic	40.0%
	GTTAATGCAGAAAAGAGGAG+GGG	-	chr1_3:35662928-35662947	None:intergenic	40.0%
	GACTATGGGAAGACTTACAT+TGG	-	chr1_3:35663290-35663309	None:intergenic	40.0%
	GTGCATGAACTTGAGAGATT+TGG	-	chr1_3:35663374-35663393	None:intergenic	40.0%
	GCATGTCACAAGTTAATGCA+GGG	-	chr1_3:35663428-35663447	None:intergenic	40.0%
	AGTTTGAATCTAGTTGCCGA+GGG	+	chr1_3:35663587-35663606	Msa0116590:intron	40.0%
	CTACATATTACCTACCAACG+AGG	-	chr1_3:35663618-35663637	None:intergenic	40.0%
!	CTCGTTGGTAGGTAATATGT+AGG	+	chr1_3:35663616-35663635	Msa0116590:intron	40.0%
	AGCTCAGAGAGAACTTATAG+AGG	-	chr1_3:35663644-35663663	None:intergenic	40.0%
	TAAGTTCTCTCTGAGCTTTG+AGG	+	chr1_3:35663647-35663666	Msa0116590:intron	40.0%
	GAATTAGGGCTAATCTGATC+TGG	+	chr1_3:35663916-35663935	Msa0116590:intron	40.0%
	GGTGAGTTGTCTTGAGAATT+AGG	+	chr1_3:35663937-35663956	Msa0116590:intron	40.0%
	GAATTAGGGCTAATCTAAGC+TGG	+	chr1_3:35663988-35664007	Msa0116590:intron	40.0%
!!	TTTTGTGATGGGAGAGTCAT+GGG	+	chr1_3:35664011-35664030	Msa0116590:intron	40.0%
	TCTTTCAAATTCGGCCTTCT+AGG	-	chr1_3:35664056-35664075	None:intergenic	40.0%
!	TTGGAGCCTATTGATTACAG+TGG	-	chr1_3:35664126-35664145	None:intergenic	40.0%
	AAATCGGCTACAGCATACTT+TGG	-	chr1_3:35664145-35664164	None:intergenic	40.0%
	CCGATTTACACTCTTGAGAA+AGG	+	chr1_3:35664216-35664235	Msa0116590:intron	40.0%
	AAATCAATGGAGAAGAAGGG+AGG	+	chr1_3:35664247-35664266	Msa0116590:intron	40.0%
	AATCAATGGAGAAGAAGGGA+GGG	+	chr1_3:35664248-35664267	Msa0116590:intron	40.0%
!	ATTTTCTTCCTCGGTCTTCT+AGG	+	chr1_3:35664332-35664351	Msa0116590:intron	40.0%
!!	TTTTGTGATGGGAGAGTCAT+GGG	-	chr1_3:35664011-35664030	None:intergenic	40.0%
!!!	ATCTGACCTGGTTTTGTGAT+GGG	-	chr1_3:35664388-35664407	None:intergenic	40.0%
!!!	AATCTGACCTGGTTTTGTGA+TGG	-	chr1_3:35664389-35664408	None:intergenic	40.0%
!!	GGTGGGTTTTCTTGAGAATT+AGG	-	chr1_3:35664415-35664434	None:intergenic	40.0%
	AATTCTCAAGAAAACCCACC+AGG	+	chr1_3:35664415-35664434	Msa0116590:intron	40.0%
	GAATTAAGGCTAATCTGACC+TGG	-	chr1_3:35664472-35664491	None:intergenic	40.0%
	AGTCCCATTCTCGAGAATTA+AGG	-	chr1_3:35664486-35664505	None:intergenic	40.0%
	AGAAAAGAATCCCTTCCACT+GGG	+	chr1_3:35664532-35664551	Msa0116590:intron	40.0%
	CACAACATCAAACTTCACCT+CGG	+	chr1_3:35664647-35664666	Msa0116590:intron	40.0%
	ATTCGCTGGTCATGATAAGA+AGG	-	chr1_3:35664688-35664707	None:intergenic	40.0%
	TAGATGAGATAGTCATTCGC+TGG	-	chr1_3:35664702-35664721	None:intergenic	40.0%
	TTGCTTCGTTGTTCAGAAGA+AGG	+	chr1_3:35664871-35664890	Msa0116590:intron	40.0%
	GATGAGAATAACGATGCAGT+AGG	+	chr1_3:35664908-35664927	Msa0116590:CDS	40.0%
	CAAACATGGATGGAAGATTG+AGG	+	chr1_3:35665104-35665123	Msa0116590:three_prime_UTR	40.0%
	CTTAACCAGAAGTTAGGCAT+GGG	+	chr1_3:35665132-35665151	Msa0116590:three_prime_UTR	40.0%
	ATGGTTCAAAGTCGGTAACT+CGG	-	chr1_3:35665387-35665406	None:intergenic	40.0%
	TGGAGATGCTTCTGGTAAGA+AGG	+	chr1_3:35656942-35656961	Msa0116590:CDS	45.0%
	AGACCAGCTTTCTCTTGACT+TGG	-	chr1_3:35656989-35657008	None:intergenic	45.0%
!	GGATGAATAGCTTTGCGCTT+AGG	-	chr1_3:35657401-35657420	None:intergenic	45.0%
	AAAGCAATGGATGCTGGTAG+TGG	-	chr1_3:35657961-35657980	None:intergenic	45.0%
!	CTACCAGCATCCATTGCTTT+TGG	+	chr1_3:35657961-35657980	Msa0116590:intron	45.0%
	CAAATACCCTTCTACCTGCA+GGG	+	chr1_3:35657992-35658011	Msa0116590:CDS	45.0%
	AGCTGGCCAATCTAGACTAT+TGG	-	chr1_3:35658149-35658168	None:intergenic	45.0%
!	GATTGGCCAGCTGAACTTAA+AGG	+	chr1_3:35658157-35658176	Msa0116590:intron	45.0%
!	CAAGATCATTTTCCACCGCA+AGG	-	chr1_3:35658457-35658476	None:intergenic	45.0%
	CAAGATCATTTGCCACCTCA+AGG	-	chr1_3:35658607-35658626	None:intergenic	45.0%
	CCGTAAACTTCAGCAAAGTC+CGG	-	chr1_3:35658721-35658740	None:intergenic	45.0%
	CCGGACTTTGCTGAAGTTTA+CGG	+	chr1_3:35658718-35658737	Msa0116590:CDS	45.0%
	TTTCCTTCAGCTTCTGCACA+TGG	-	chr1_3:35658780-35658799	None:intergenic	45.0%
	TGTGCAGAAGCTGAAGGAAA+TGG	+	chr1_3:35658780-35658799	Msa0116590:CDS	45.0%
	AACAAAAACTCGCGATCAGC+AGG	+	chr1_3:35659052-35659071	Msa0116590:intron	45.0%
	ACAAAAACTCGCGATCAGCA+GGG	+	chr1_3:35659053-35659072	Msa0116590:intron	45.0%
	CAGCAGGGAACAATTACATC+AGG	+	chr1_3:35659068-35659087	Msa0116590:intron	45.0%
!	TGTTATAACAGACGGGCTTC+TGG	-	chr1_3:35659104-35659123	None:intergenic	45.0%
!!!	TTCTGTTTTTTGCTGCTGGC+TGG	-	chr1_3:35659187-35659206	None:intergenic	45.0%
	ACAGAACCGCAAAAAACAGC+AGG	+	chr1_3:35659227-35659246	Msa0116590:intron	45.0%
	ATCCGTTAATGGAGCTGCTT+TGG	-	chr1_3:35659302-35659321	None:intergenic	45.0%
!	AGCAGCTCCATTAACGGATA+AGG	+	chr1_3:35659303-35659322	Msa0116590:intron	45.0%
	GGATGTTGAGTCGTATGAAG+GGG	-	chr1_3:35659373-35659392	None:intergenic	45.0%
	GTGGATGTTGAGTCGTATGA+AGG	-	chr1_3:35659375-35659394	None:intergenic	45.0%
!!	TTAAGGTTTTGTCGTGGAGG+TGG	-	chr1_3:35659394-35659413	None:intergenic	45.0%
!!	CGATTAAGGTTTTGTCGTGG+AGG	-	chr1_3:35659397-35659416	None:intergenic	45.0%
!!	AGGCGATTAAGGTTTTGTCG+TGG	-	chr1_3:35659400-35659419	None:intergenic	45.0%
!!	GTATCGGTTACCGGTTGATT+TGG	-	chr1_3:35659505-35659524	None:intergenic	45.0%
	TGGGGCTGAGACAAATAAGA+AGG	-	chr1_3:35659531-35659550	None:intergenic	45.0%
!!	TCCATTGGGAGTGTTGGATT+GGG	-	chr1_3:35659550-35659569	None:intergenic	45.0%
	ATTCACTGTGTTTGCTTCCG+AGG	-	chr1_3:35659633-35659652	None:intergenic	45.0%
	GTGTGAAGGGATGTTGGAAT+CGG	-	chr1_3:35659670-35659689	None:intergenic	45.0%
	CAAGATTGCGTTCTGTGTGA+AGG	-	chr1_3:35659684-35659703	None:intergenic	45.0%
	CTAAAGTTGTTGCGTTCTCC+TGG	-	chr1_3:35659779-35659798	None:intergenic	45.0%
	TTCCTCCATTTGGAAAAGCC+CGG	-	chr1_3:35659808-35659827	None:intergenic	45.0%
	TATATCAGAGGAGCAAGGGA+GGG	-	chr1_3:35659835-35659854	None:intergenic	45.0%
	AGAGGCGAGAACTATATCAG+AGG	-	chr1_3:35659847-35659866	None:intergenic	45.0%
!	GTTGGAGGGTATAATGCTAG+AGG	-	chr1_3:35659865-35659884	None:intergenic	45.0%
!!	GGAAGAGAGTGGTGCTTTTT+CGG	-	chr1_3:35659907-35659926	None:intergenic	45.0%
!!	CGGATTTGGAAGGCTTTAGA+GGG	-	chr1_3:35659962-35659981	None:intergenic	45.0%
	GAGTTGTATGCGGATTTGGA+AGG	-	chr1_3:35659972-35659991	None:intergenic	45.0%
	AAGGGAGTTGTATGCGGATT+TGG	-	chr1_3:35659976-35659995	None:intergenic	45.0%
!	GGAGACGTCCTCTTTTTGTT+TGG	-	chr1_3:35660013-35660032	None:intergenic	45.0%
	GAAAACGACCAATTGCACTC+CGG	+	chr1_3:35660035-35660054	Msa0116590:intron	45.0%
	CTTGGGGACTCTTAATACTC+CGG	-	chr1_3:35660057-35660076	None:intergenic	45.0%
!!	TGTAGGGGTGTTAAAGGTTG+AGG	-	chr1_3:35660291-35660310	None:intergenic	45.0%
	GTATGGCACTTCAAGTGTAG+GGG	-	chr1_3:35660306-35660325	None:intergenic	45.0%
!	TACTCTTTGGAAGGAGGTGT+TGG	-	chr1_3:35660336-35660355	None:intergenic	45.0%
	CACTAGCGAAATGGAAATGG+AGG	-	chr1_3:35660376-35660395	None:intergenic	45.0%
	GCTCACTAGCGAAATGGAAA+TGG	-	chr1_3:35660379-35660398	None:intergenic	45.0%
	ACTTGAGCTCACTAGCGAAA+TGG	-	chr1_3:35660385-35660404	None:intergenic	45.0%
!	CCAAAAGAGGATGGTGGTTT+AGG	-	chr1_3:35660431-35660450	None:intergenic	45.0%
!	CCTAAACCACCATCCTCTTT+TGG	+	chr1_3:35660428-35660447	Msa0116590:intron	45.0%
	TTTCCTAGTTATGTGCGCAG+AGG	-	chr1_3:35660520-35660539	None:intergenic	45.0%
	TTTCCTAGTTATGTGCGCAG+AGG	-	chr1_3:35660520-35660539	None:intergenic	45.0%
	CTCCCTTAGTGAAGACAGTT+TGG	-	chr1_3:35662816-35662835	None:intergenic	45.0%
	TAATGCAGAAAAGAGGAGGG+GGG	-	chr1_3:35662926-35662945	None:intergenic	45.0%
	GGATTCAGAGCCATAGTCAA+GGG	-	chr1_3:35663353-35663372	None:intergenic	45.0%
	TGGATTCAGAGCCATAGTCA+AGG	-	chr1_3:35663354-35663373	None:intergenic	45.0%
	GGCATGTCACAAGTTAATGC+AGG	-	chr1_3:35663429-35663448	None:intergenic	45.0%
	CGGCAACTAGATTCAAACTC+AGG	-	chr1_3:35663586-35663605	None:intergenic	45.0%
	GAGTTTGAATCTAGTTGCCG+AGG	+	chr1_3:35663586-35663605	Msa0116590:intron	45.0%
	GTTTGAATCTAGTTGCCGAG+GGG	+	chr1_3:35663588-35663607	Msa0116590:intron	45.0%
!!	TTTTCGCAAGTTGAGTCCCA+GGG	-	chr1_3:35663692-35663711	None:intergenic	45.0%
	TGTTAGCAGTCAACACTCAG+TGG	+	chr1_3:35663875-35663894	Msa0116590:intron	45.0%
	GAATTAGGGCTAATCTGACC+TGG	+	chr1_3:35663952-35663971	Msa0116590:intron	45.0%
!	GTGGGCTGTCTTGAGAATTA+GGG	+	chr1_3:35663974-35663993	Msa0116590:intron	45.0%
!!	GTTTTGTGATGGGAGAGTCA+TGG	+	chr1_3:35664010-35664029	Msa0116590:intron	45.0%
	GTCGTCGCGTCTTTCAAATT+CGG	-	chr1_3:35664065-35664084	None:intergenic	45.0%
!	GAGCCTATTGATTACAGTGG+CGG	-	chr1_3:35664123-35664142	None:intergenic	45.0%
!	GTTTGGAGTTGGAGGCAAAT+TGG	-	chr1_3:35664195-35664214	None:intergenic	45.0%
!	TGTAAATCGGCGTTTGGAGT+TGG	-	chr1_3:35664206-35664225	None:intergenic	45.0%
!	CAAGAGTGTAAATCGGCGTT+TGG	-	chr1_3:35664212-35664231	None:intergenic	45.0%
	GTAGATAACCTAGAAGACCG+AGG	-	chr1_3:35664343-35664362	None:intergenic	45.0%
!!	GTTTTGTGATGGGAGAGTCA+TGG	-	chr1_3:35664010-35664029	None:intergenic	45.0%
	GAATTAGGGCTAATCTGACC+TGG	-	chr1_3:35663952-35663971	None:intergenic	45.0%
	TTCTGTTAGCAGCCAACACT+CGG	-	chr1_3:35664516-35664535	None:intergenic	45.0%
	CAGAAAAGAATCCCTTCCAC+TGG	+	chr1_3:35664531-35664550	Msa0116590:intron	45.0%
	GAAAAGAATCCCTTCCACTG+GGG	+	chr1_3:35664533-35664552	Msa0116590:intron	45.0%
	CTAGTCATCTGCTTCAATCC+CGG	+	chr1_3:35664719-35664738	Msa0116590:intron	45.0%
	TCTATATTCGGCCTTAGTCC+GGG	-	chr1_3:35664740-35664759	None:intergenic	45.0%
	CTCTATATTCGGCCTTAGTC+CGG	-	chr1_3:35664741-35664760	None:intergenic	45.0%
	CTACTTTGCTAGTGCTCAAG+TGG	-	chr1_3:35664978-35664997	None:intergenic	45.0%
!	CCATGCCTAACTTCTGGTTA+AGG	-	chr1_3:35665134-35665153	None:intergenic	45.0%
	CCTTAACCAGAAGTTAGGCA+TGG	+	chr1_3:35665131-35665150	Msa0116590:three_prime_UTR	45.0%
	AGTTGCACTCAGCTGTAAAG+TGG	+	chr1_3:35665167-35665186	Msa0116590:three_prime_UTR	45.0%
!	GTTGGTGAACTATGAGTTGC+TGG	-	chr1_3:35665365-35665384	None:intergenic	45.0%
	TTCAAAGTCGGTAACTCGGT+TGG	-	chr1_3:35665383-35665402	None:intergenic	45.0%
	TGTCTGTGGGCACAACACTA+CGG	+	chr1_3:35656665-35656684	Msa0116590:five_prime_UTR	50.0%
!	ACTAGTGGTGGAGATGCTTC+TGG	+	chr1_3:35656934-35656953	Msa0116590:CDS	50.0%
!	ATAGCTTTGCGCTTAGGACG+AGG	-	chr1_3:35657395-35657414	None:intergenic	50.0%
	GAGCCAAAAGCAATGGATGC+TGG	-	chr1_3:35657967-35657986	None:intergenic	50.0%
	TGCCGAAGAGCCAAAAGCAA+TGG	-	chr1_3:35657974-35657993	None:intergenic	50.0%
	GCAAATACCCTTCTACCTGC+AGG	+	chr1_3:35657991-35658010	Msa0116590:CDS	50.0%
	GACATACCCTGCAGGTAGAA+GGG	-	chr1_3:35658001-35658020	None:intergenic	50.0%
	AGACATACCCTGCAGGTAGA+AGG	-	chr1_3:35658002-35658021	None:intergenic	50.0%
	TCAAAGGGGATCAGCAACAG+CGG	+	chr1_3:35658234-35658253	Msa0116590:CDS	50.0%
	ATCAGCAACAGCGGTCTTAG+TGG	+	chr1_3:35658243-35658262	Msa0116590:CDS	50.0%
!	GGATTTTGTGTCCCTTGCGT+TGG	-	chr1_3:35658309-35658328	None:intergenic	50.0%
	TCATGGTAATCGTCTGCGAC+AGG	+	chr1_3:35658335-35658354	Msa0116590:intron	50.0%
	TGCACATGGCCGTTTGTATC+CGG	-	chr1_3:35658766-35658785	None:intergenic	50.0%
	GTTCTGTATATGCCAGCCTC+AGG	-	chr1_3:35659214-35659233	None:intergenic	50.0%
!	ATGGAGCTGCTTTGGTAAGG+CGG	-	chr1_3:35659294-35659313	None:intergenic	50.0%
!!	GAGGGTGCCTTATCCGTTAA+TGG	-	chr1_3:35659313-35659332	None:intergenic	50.0%
!	TAACGGATAAGGCACCCTCT+CGG	+	chr1_3:35659314-35659333	Msa0116590:intron	50.0%
!!	AATGGTGTTGGTGTCCGAGA+GGG	-	chr1_3:35659331-35659350	None:intergenic	50.0%
	GGAGTTAGTGGAGGCGATTA+AGG	-	chr1_3:35659411-35659430	None:intergenic	50.0%
!!	AGAAGGTCCGTATCGGTTAC+CGG	-	chr1_3:35659514-35659533	None:intergenic	50.0%
!!	CCATTGGGAGTGTTGGATTG+GGG	-	chr1_3:35659549-35659568	None:intergenic	50.0%
!!	GTCCATTGGGAGTGTTGGAT+TGG	-	chr1_3:35659551-35659570	None:intergenic	50.0%
	GCAAGGATTGTTGAGGTGGA+TGG	-	chr1_3:35659606-35659625	None:intergenic	50.0%
	TGTGGCAAGGATTGTTGAGG+TGG	-	chr1_3:35659610-35659629	None:intergenic	50.0%
	AGGTGTGGCAAGGATTGTTG+AGG	-	chr1_3:35659613-35659632	None:intergenic	50.0%
	CAACAATCCTTGCCACACCT+CGG	+	chr1_3:35659613-35659632	Msa0116590:intron	50.0%
	CGTTCTGTGTGAAGGGATGT+TGG	-	chr1_3:35659676-35659695	None:intergenic	50.0%
	ACGCAATCTTGAGAAGCCTC+CGG	+	chr1_3:35659693-35659712	Msa0116590:intron	50.0%
	GCAACAACTTTAGACGGTGC+CGG	+	chr1_3:35659786-35659805	Msa0116590:intron	50.0%
	CAACAACTTTAGACGGTGCC+GGG	+	chr1_3:35659787-35659806	Msa0116590:intron	50.0%
!!!	GGAGGGTGTTTTCCTCCATT+TGG	-	chr1_3:35659818-35659837	None:intergenic	50.0%
	CTATATCAGAGGAGCAAGGG+AGG	-	chr1_3:35659836-35659855	None:intergenic	50.0%
	CGTTGGAAGTTGGAAGAGAG+TGG	-	chr1_3:35659918-35659937	None:intergenic	50.0%
!	AGATGTGTGGCGTTGGAAGT+TGG	-	chr1_3:35659928-35659947	None:intergenic	50.0%
	TAGACGAAGATGTGTGGCGT+TGG	-	chr1_3:35659935-35659954	None:intergenic	50.0%
	GGTCTCTAGACGAAGATGTG+TGG	-	chr1_3:35659941-35659960	None:intergenic	50.0%
!	GCGGATTTGGAAGGCTTTAG+AGG	-	chr1_3:35659963-35659982	None:intergenic	50.0%
	AGGCTTATGTGGGTGACTTG+GGG	-	chr1_3:35660073-35660092	None:intergenic	50.0%
	GAGGCTTATGTGGGTGACTT+GGG	-	chr1_3:35660074-35660093	None:intergenic	50.0%
!!!	TTTTGGGATGTGGCTTGGAG+AGG	-	chr1_3:35660152-35660171	None:intergenic	50.0%
!!!	CGAGTTTTTGGGATGTGGCT+TGG	-	chr1_3:35660157-35660176	None:intergenic	50.0%
!!	GTGGAGGGATTTGGTGTCTT+TGG	-	chr1_3:35660237-35660256	None:intergenic	50.0%
	GGTTGAGGATTACACTTGGC+CGG	-	chr1_3:35660276-35660295	None:intergenic	50.0%
!!	GAGGTGTTGGTGGAGAAGTA+TGG	-	chr1_3:35660323-35660342	None:intergenic	50.0%
!!	TCTTTGGAAGGAGGTGTTGG+TGG	-	chr1_3:35660333-35660352	None:intergenic	50.0%
	CTTCCTCTGCGCACATAACT+AGG	+	chr1_3:35660514-35660533	Msa0116590:intron	50.0%
!!!	GGAAGCGCCTGTTTTTTCCT+AGG	+	chr1_3:35661099-35661118	Msa0116590:intron	50.0%
!!	GGTTTGAGTTGGGATGCTGA+AGG	-	chr1_3:35661208-35661227	None:intergenic	50.0%
	CTTCCTCTGCGCACATAACT+AGG	+	chr1_3:35660514-35660533	Msa0116590:intron	50.0%
!!!	GGAAGCGCCTGTTTTTTCCT+AGG	+	chr1_3:35661099-35661118	Msa0116590:intron	50.0%
!!	GGTTTGAGTTGGGATGCTGA+AGG	-	chr1_3:35661208-35661227	None:intergenic	50.0%
	AAAAACTGCCCATGAGGCGT+CGG	-	chr1_3:35662624-35662643	None:intergenic	50.0%
	AATGCAGAAAAGAGGAGGGG+GGG	-	chr1_3:35662925-35662944	None:intergenic	50.0%
!	GGCTAGACAAGTTGACAGTG+AGG	-	chr1_3:35663090-35663109	None:intergenic	50.0%
	TTCTCCGATCCTAGTAACCC+TGG	+	chr1_3:35663672-35663691	Msa0116590:intron	50.0%
	TCTCCGATCCTAGTAACCCT+GGG	+	chr1_3:35663673-35663692	Msa0116590:intron	50.0%
	AGTCCCAGGGTTACTAGGAT+CGG	-	chr1_3:35663679-35663698	None:intergenic	50.0%
	AGTTGAGTCCCAGGGTTACT+AGG	-	chr1_3:35663684-35663703	None:intergenic	50.0%
!!	GTTTTCGCAAGTTGAGTCCC+AGG	-	chr1_3:35663693-35663712	None:intergenic	50.0%
	TTAGGGCTAATCTGACCTGG+TGG	+	chr1_3:35663955-35663974	Msa0116590:intron	50.0%
	TAGGGCTAATCTGACCTGGT+GGG	+	chr1_3:35663956-35663975	Msa0116590:intron	50.0%
	AATTCTCAAGACAGCCCACC+AGG	-	chr1_3:35663973-35663992	None:intergenic	50.0%
!!	GGTGGGCTGTCTTGAGAATT+AGG	+	chr1_3:35663973-35663992	Msa0116590:intron	50.0%
	ATTTGAAAGACGCGACGACG+AGG	+	chr1_3:35664066-35664085	Msa0116590:intron	50.0%
	GTGCCGCCACTGTAATCAAT+AGG	+	chr1_3:35664117-35664136	Msa0116590:intron	50.0%
	AGTTGGAGGCAAATTGGCGT+TGG	-	chr1_3:35664189-35664208	None:intergenic	50.0%
!	AAATCGGCGTTTGGAGTTGG+AGG	-	chr1_3:35664203-35664222	None:intergenic	50.0%
	AATGGAGAAGAAGGGAGGGA+AGG	+	chr1_3:35664252-35664271	Msa0116590:intron	50.0%
!!	AGGCAGAAGTGCTCACGAAA+AGG	+	chr1_3:35664307-35664326	Msa0116590:intron	50.0%
	GACTCTCCCATCACAAAACC+AGG	+	chr1_3:35664379-35664398	Msa0116590:intron	50.0%
	GAATTAGGGCTCATCTGACC+TGG	-	chr1_3:35664436-35664455	None:intergenic	50.0%
	GGACTAAATCCACCGAGTGT+TGG	+	chr1_3:35664501-35664520	Msa0116590:intron	50.0%
	TTTCTTGGACCCCAGTGGAA+GGG	-	chr1_3:35664545-35664564	None:intergenic	50.0%
	GAAAGTTTCTTGGACCCCAG+TGG	-	chr1_3:35664550-35664569	None:intergenic	50.0%
	GGCAGAGAATCAAGAAACCG+AGG	-	chr1_3:35664667-35664686	None:intergenic	50.0%
	TCTGCTTCAATCCCGGACTA+AGG	+	chr1_3:35664726-35664745	Msa0116590:intron	50.0%
	ACACTCCCATGCCTAACTTC+TGG	-	chr1_3:35665140-35665159	None:intergenic	50.0%
	TGAAAAGGGTCATTTCGCCC+AGG	-	chr1_3:35665584-35665603	None:intergenic	50.0%
!!	GCTGGTAGTGGCACCAAAAC+TGG	-	chr1_3:35657949-35657968	None:intergenic	55.0%
	TACCTGCAGGGTATGTCTCG+TGG	+	chr1_3:35658004-35658023	Msa0116590:CDS	55.0%
	ACCTGCAGGGTATGTCTCGT+GGG	+	chr1_3:35658005-35658024	Msa0116590:CDS	55.0%
	CTTTGGTAAGGCGGAGGTTG+AGG	-	chr1_3:35659285-35659304	None:intergenic	55.0%
!!	GAATGGTGTTGGTGTCCGAG+AGG	-	chr1_3:35659332-35659351	None:intergenic	55.0%
	GTTGAGTCGTATGAAGGGGC+CGG	-	chr1_3:35659369-35659388	None:intergenic	55.0%
!	TTGCGGAGTAGCGGAGTTAG+TGG	-	chr1_3:35659423-35659442	None:intergenic	55.0%
!!	CGCGGTTTGGTGCATTTGGA+GGG	-	chr1_3:35659477-35659496	None:intergenic	55.0%
	CCTCCAAATGCACCAAACCG+CGG	+	chr1_3:35659475-35659494	Msa0116590:intron	55.0%
!!	ATGCCGCGGTTTGGTGCATT+TGG	-	chr1_3:35659481-35659500	None:intergenic	55.0%
!	TGATTTGGCATGCCGCGGTT+TGG	-	chr1_3:35659490-35659509	None:intergenic	55.0%
	CCCCAATCCAACACTCCCAA+TGG	+	chr1_3:35659546-35659565	Msa0116590:intron	55.0%
	TTTGCTTCCGAGGTGTGGCA+AGG	-	chr1_3:35659623-35659642	None:intergenic	55.0%
	CTGTGTTTGCTTCCGAGGTG+TGG	-	chr1_3:35659628-35659647	None:intergenic	55.0%
	CAATCTTGAGAAGCCTCCGG+AGG	+	chr1_3:35659696-35659715	Msa0116590:intron	55.0%
	CAGACATGTGTTACCTCCGG+AGG	-	chr1_3:35659712-35659731	None:intergenic	55.0%
!	TGCCGGGCTTTTCCAAATGG+AGG	+	chr1_3:35659803-35659822	Msa0116590:intron	55.0%
	GGAGGCTTATGTGGGTGACT+TGG	-	chr1_3:35660075-35660094	None:intergenic	55.0%
!	GGATGGTGGTTTAGGGGTGA+GGG	-	chr1_3:35660423-35660442	None:intergenic	55.0%
!	AGGATGGTGGTTTAGGGGTG+AGG	-	chr1_3:35660424-35660443	None:intergenic	55.0%
	TCACTAAGCCGACGCCTCAT+AGG	+	chr1_3:35661515-35661534	Msa0116590:intron	55.0%
	ATCACTAAGCCGACGCCTCA+TGG	+	chr1_3:35661514-35661533	Msa0116590:intron	55.0%
	TCACTAAGCCGACGCCTCAT+GGG	+	chr1_3:35661515-35661534	Msa0116590:intron	55.0%
	ATGCAGAAAAGAGGAGGGGG+GGG	-	chr1_3:35662924-35662943	None:intergenic	55.0%
	TGAATCTAGTTGCCGAGGGG+AGG	+	chr1_3:35663591-35663610	Msa0116590:intron	55.0%
	TAGGGCTCATCTGACCTGGT+GGG	-	chr1_3:35664432-35664451	None:intergenic	55.0%
	TTAGGGCTCATCTGACCTGG+TGG	-	chr1_3:35664433-35664452	None:intergenic	55.0%
	TGTTAGCAGCCAACACTCGG+TGG	-	chr1_3:35664513-35664532	None:intergenic	55.0%
	GTTTCTTGGACCCCAGTGGA+AGG	-	chr1_3:35664546-35664565	None:intergenic	55.0%
	TGCGCTTAGGACGAGGAGGA+GGG	-	chr1_3:35657388-35657407	None:intergenic	60.0%
	TTGCGCTTAGGACGAGGAGG+AGG	-	chr1_3:35657389-35657408	None:intergenic	60.0%
	GCTTTGCGCTTAGGACGAGG+AGG	-	chr1_3:35657392-35657411	None:intergenic	60.0%
	TCCCACGAGACATACCCTGC+AGG	-	chr1_3:35658009-35658028	None:intergenic	60.0%
	CGGCCATGTGCAGAAGCTGA+AGG	+	chr1_3:35658774-35658793	Msa0116590:CDS	60.0%
	GAGGTTGAGGCTGGGGTATG+CGG	-	chr1_3:35659272-35659291	None:intergenic	60.0%
	TAAGGCGGAGGTTGAGGCTG+GGG	-	chr1_3:35659279-35659298	None:intergenic	60.0%
	GTAAGGCGGAGGTTGAGGCT+GGG	-	chr1_3:35659280-35659299	None:intergenic	60.0%
!	GAGCTGCTTTGGTAAGGCGG+AGG	-	chr1_3:35659291-35659310	None:intergenic	60.0%
!	CGGAGTAGCGGAGTTAGTGG+AGG	-	chr1_3:35659420-35659439	None:intergenic	60.0%
!!	CCGCGGTTTGGTGCATTTGG+AGG	-	chr1_3:35659478-35659497	None:intergenic	60.0%
!!	CCGGTTGATTTGGCATGCCG+CGG	-	chr1_3:35659495-35659514	None:intergenic	60.0%
	CCGCGGCATGCCAAATCAAC+CGG	+	chr1_3:35659492-35659511	Msa0116590:intron	60.0%
!!	CGGTGCCGGGCTTTTCCAAA+TGG	+	chr1_3:35659800-35659819	Msa0116590:intron	60.0%
!	GTCGCGTTGGTGGAGGGATT+TGG	-	chr1_3:35660246-35660265	None:intergenic	60.0%
!	GCATGTGTCGCGTTGGTGGA+GGG	-	chr1_3:35660252-35660271	None:intergenic	60.0%
!	TGCATGTGTCGCGTTGGTGG+AGG	-	chr1_3:35660253-35660272	None:intergenic	60.0%
	CACCAACGCGACACATGCAC+CGG	+	chr1_3:35660254-35660273	Msa0116590:intron	60.0%
	AGGGGTGAGGGATGTCAGAG+TGG	-	chr1_3:35660411-35660430	None:intergenic	60.0%
	TGCAGAAAAGAGGAGGGGGG+GGG	-	chr1_3:35662923-35662942	None:intergenic	60.0%
	TACCAACGAGGTCCTCCCCT+CGG	-	chr1_3:35663606-35663625	None:intergenic	60.0%
	GGAGAAGAAGGGAGGGAAGG+AGG	+	chr1_3:35664255-35664274	Msa0116590:intron	60.0%
	GGTAAGGCGGAGGTTGAGGC+TGG	-	chr1_3:35659281-35659300	None:intergenic	65.0%
	CGGTGCATGTGTCGCGTTGG+TGG	-	chr1_3:35660256-35660275	None:intergenic	65.0%
	AGAAAAGAGGAGGGGGGGGG+GGG	-	chr1_3:35662920-35662939	None:intergenic	65.0%
	CAGAAAAGAGGAGGGGGGGG+GGG	-	chr1_3:35662921-35662940	None:intergenic	65.0%
	GCAGAAAAGAGGAGGGGGGG+GGG	-	chr1_3:35662922-35662941	None:intergenic	65.0%
	GAGGGGAGGACCTCGTTGGT+AGG	+	chr1_3:35663605-35663624	Msa0116590:intron	65.0%
	GGCCGGTGCATGTGTCGCGT+TGG	-	chr1_3:35660259-35660278	None:intergenic	70.0%
	AAAAGAGGAGGGGGGGGGGG+GGG	-	chr1_3:35662918-35662937	None:intergenic	70.0%
	GAAAAGAGGAGGGGGGGGGG+GGG	-	chr1_3:35662919-35662938	None:intergenic	70.0%
	TGCCGAGGGGAGGACCTCGT+TGG	+	chr1_3:35663601-35663620	Msa0116590:intron	70.0%
	AAAGAGGAGGGGGGGGGGGG+GGG	-	chr1_3:35662917-35662936	None:intergenic	75.0%
!	AAGAGGAGGGGGGGGGGGGG+GGG	-	chr1_3:35662916-35662935	None:intergenic	80.0%
!	AGAGGAGGGGGGGGGGGGGG+GGG	-	chr1_3:35662915-35662934	None:intergenic	85.0%
!	AGGAGGGGGGGGGGGGGGGG+GGG	-	chr1_3:35662913-35662932	None:intergenic	90.0%
!	GAGGAGGGGGGGGGGGGGGG+GGG	-	chr1_3:35662914-35662933	None:intergenic	90.0%
!	AGGGGGGGGGGGGGGGGGGG+GGG	-	chr1_3:35662910-35662929	None:intergenic	95.0%
!	GAGGGGGGGGGGGGGGGGGG+GGG	-	chr1_3:35662911-35662930	None:intergenic	95.0%
!	GGAGGGGGGGGGGGGGGGGG+GGG	-	chr1_3:35662912-35662931	None:intergenic	95.0%

Chromosome	Type	Strat	End	Strand	Name
chr1_3	gene	35656640	35665717	35656640	ID=Msa0116590;Name=Msa0116590
chr1_3	mRNA	35656640	35665717	35656640	ID=Msa0116590-mRNA-1;Parent=Msa0116590;Name=Msa0116590-mRNA-1;_AED=0.11;_eAED=0.11;_QI=216\|1\|1\|1\|0.62\|0.66\|9\|654\|292
chr1_3	exon	35656640	35657046	35656640	ID=Msa0116590-mRNA-1:exon:11486;Parent=Msa0116590-mRNA-1
chr1_3	exon	35657139	35657196	35657139	ID=Msa0116590-mRNA-1:exon:11487;Parent=Msa0116590-mRNA-1
chr1_3	exon	35657323	35657446	35657323	ID=Msa0116590-mRNA-1:exon:11488;Parent=Msa0116590-mRNA-1
chr1_3	exon	35657968	35658090	35657968	ID=Msa0116590-mRNA-1:exon:11489;Parent=Msa0116590-mRNA-1
chr1_3	exon	35658223	35658339	35658223	ID=Msa0116590-mRNA-1:exon:11490;Parent=Msa0116590-mRNA-1
chr1_3	exon	35658713	35658822	35658713	ID=Msa0116590-mRNA-1:exon:11491;Parent=Msa0116590-mRNA-1
chr1_3	exon	35663067	35663126	35663067	ID=Msa0116590-mRNA-1:exon:11492;Parent=Msa0116590-mRNA-1
chr1_3	exon	35664887	35665012	35664887	ID=Msa0116590-mRNA-1:exon:11493;Parent=Msa0116590-mRNA-1
chr1_3	exon	35665094	35665717	35665094	ID=Msa0116590-mRNA-1:exon:11494;Parent=Msa0116590-mRNA-1
chr1_3	five_prime_UTR	35656640	35656855	35656640	ID=Msa0116590-mRNA-1:five_prime_utr;Parent=Msa0116590-mRNA-1
chr1_3	CDS	35656856	35657046	35656856	ID=Msa0116590-mRNA-1:cds;Parent=Msa0116590-mRNA-1
chr1_3	CDS	35657139	35657196	35657139	ID=Msa0116590-mRNA-1:cds;Parent=Msa0116590-mRNA-1
chr1_3	CDS	35657323	35657446	35657323	ID=Msa0116590-mRNA-1:cds;Parent=Msa0116590-mRNA-1
chr1_3	CDS	35657968	35658090	35657968	ID=Msa0116590-mRNA-1:cds;Parent=Msa0116590-mRNA-1
chr1_3	CDS	35658223	35658339	35658223	ID=Msa0116590-mRNA-1:cds;Parent=Msa0116590-mRNA-1
chr1_3	CDS	35658713	35658822	35658713	ID=Msa0116590-mRNA-1:cds;Parent=Msa0116590-mRNA-1
chr1_3	CDS	35663067	35663126	35663067	ID=Msa0116590-mRNA-1:cds;Parent=Msa0116590-mRNA-1
chr1_3	CDS	35664887	35664982	35664887	ID=Msa0116590-mRNA-1:cds;Parent=Msa0116590-mRNA-1
chr1_3	three_prime_UTR	35664983	35665012	35664983	ID=Msa0116590-mRNA-1:three_prime_utr;Parent=Msa0116590-mRNA-1
chr1_3	three_prime_UTR	35665094	35665717	35665094	ID=Msa0116590-mRNA-1:three_prime_utr;Parent=Msa0116590-mRNA-1

Gene Sequence

>Msa0116590

ATGTTCTCTGTGGCAGAAGAAAACCAAACCATGAACTCTAATTCTAACTCAATGGCAGCACCAACAACAACTACAACAACTAGTGGTGGAGATGCTTCTGGTAAGAAGGTTAGAAAGCCTTACACAATTACCAAGTCAAGAGAAAGCTGGTCTGATGAAGAACATGACAAGTTTCTTGAAGCTCTTCAATTATTTGATAGAGATTGGAAGAAGATTGAAGATTTTGTTGGCTCTAAAACAGTTATTCAGATTCGAAGTCATGCCCAAAAATACTTCTTAAAGGTTCAAAAGAATGGAACACTAGCTCATGTCCCTCCTCCTCGTCCTAAGCGCAAAGCTATTCATCCTTATCCACAAAAAGCAACAAAAAATGCATCCATTGCTTTTGGCTCTTCGGCAAATACCCTTCTACCTGCAGGGTATGTCTCGTGGGATGAAACGTCCATGCTGATGAATACTTGTCAGGATGAACTCAACAATCTTCAAGGAAATGAAGCTGACATTGGATCAAAGGGGATCAGCAACAGCGGTCTTAGTGGTGTTGAAGATACTAATACAAGGCTCCCTACTTCTCAAATACCAACGCAAGGGACACAAAATCCCGTGATTCATGGTTTGCCGGACTTTGCTGAAGTTTACGGTTTCATTGGAAGTGTTTTTGATCCGGATACAAACGGCCATGTGCAGAAGCTGAAGGAAATGGACCCTATAAACTTTGAAACTGTTTTGTTGTTAATGAGAAACCTCACTGTCAACTTGTCTAGCCCTAATTTTGATCCCATTAAGAAGGCGATGTCAACATATGATGAGAATAACGATGCAGTAGGAGTTACTGATGATAAGAAGCAGACAAATGATGACTCATGTCAAACCACTTGA

Protein sequence

>Msa0116590

MFSVAEENQTMNSNSNSMAAPTTTTTTSGGDASGKKVRKPYTITKSRESWSDEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTLAHVPPPRPKRKAIHPYPQKATKNASIAFGSSANTLLPAGYVSWDETSMLMNTCQDELNNLQGNEADIGSKGISNSGLSGVEDTNTRLPTSQIPTQGTQNPVIHGLPDFAEVYGFIGSVFDPDTNGHVQKLKEMDPINFETVLLLMRNLTVNLSSPNFDPIKKAMSTYDENNDAVGVTDDKKQTNDDSCQTT*