AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0056070

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0056070 MtrunA17_Chr1g0148321 95.750 1106 23 2 1 1105 1 1083 0.0 2189
Msa0056070 MtrunA17_Chr3g0138791 74.593 1106 257 2 1 1105 1 1083 0.0 1655
Msa0056070 MtrunA17_Chr3g0123951 29.825 342 188 10 108 408 24 354 6.75e-34 134
Msa0056070 MtrunA17_Chr8g0382161 29.524 315 174 7 108 382 24 330 1.94e-32 130
Msa0056070 MtrunA17_Chr3g0119031 29.429 350 210 10 107 447 199 520 4.09e-30 129
Msa0056070 MtrunA17_Chr5g0439971 29.143 350 211 10 107 447 204 525 8.73e-30 128
Msa0056070 MtrunA17_Chr1g0170261 31.119 286 181 8 107 383 201 479 4.23e-29 126
Msa0056070 MtrunA17_Chr6g0458441 29.900 301 168 10 106 383 126 406 4.55e-29 124
Msa0056070 MtrunA17_Chr6g0458421 29.293 297 179 10 106 385 28 310 1.33e-27 119
Msa0056070 MtrunA17_Chr5g0411271 29.293 297 174 11 107 385 154 432 1.09e-26 117
Msa0056070 MtrunA17_Chr4g0074041 28.972 321 202 10 83 386 68 379 2.76e-26 116
Msa0056070 MtrunA17_Chr1g0150541 28.041 296 187 9 106 383 180 467 1.56e-25 114
Msa0056070 MtrunA17_Chr3g0133061 28.525 305 173 11 106 383 583 869 8.32e-25 112
Msa0056070 MtrunA17_Chr6g0458431 26.076 395 234 14 106 472 93 457 1.50e-24 110
Msa0056070 MtrunA17_Chr5g0427301 28.852 305 171 12 106 383 541 826 3.38e-23 107
Msa0056070 MtrunA17_Chr2g0313171 27.907 301 179 11 106 382 463 749 9.59e-23 105
Msa0056070 MtrunA17_Chr2g0312901 27.632 304 191 10 100 383 15 309 1.21e-22 104
Msa0056070 MtrunA17_Chr8g0366721 25.939 293 180 10 107 385 212 481 3.90e-21 99.0
Msa0056070 MtrunA17_Chr5g0412381 27.703 296 183 11 106 382 423 706 2.51e-20 97.4
Msa0056070 MtrunA17_Chr1g0149991 23.919 347 198 11 108 400 182 516 1.22e-16 84.7
Msa0056070 MtrunA17_Chr4g0064671 27.742 155 88 4 252 385 77 228 1.90e-12 68.9
Msa0056070 MtrunA17_Chr7g0255591 31.298 131 85 4 255 383 754 881 1.64e-11 68.9
Msa0056070 MtrunA17_Chr4g0062561 22.712 295 190 10 103 382 249 520 6.76e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0056070 AT3G49600.2 57.491 1108 425 11 1 1104 1 1066 0.0 1196
Msa0056070 AT3G49600.1 57.491 1108 425 11 1 1104 1 1066 0.0 1196
Msa0056070 AT3G49600.3 56.318 1108 417 12 1 1104 1 1045 0.0 1162
Msa0056070 AT2G22310.1 29.712 313 175 8 108 382 24 329 1.23e-31 128
Msa0056070 AT3G11910.4 29.714 350 209 10 107 447 197 518 8.64e-31 132
Msa0056070 AT3G11910.2 29.714 350 209 10 107 447 197 518 8.64e-31 132
Msa0056070 AT3G11910.3 29.714 350 209 10 107 447 198 519 9.18e-31 132
Msa0056070 AT3G11910.1 29.714 350 209 10 107 447 198 519 9.18e-31 132
Msa0056070 AT5G06600.1 29.714 350 210 10 107 447 199 521 1.64e-30 131
Msa0056070 AT5G06600.3 29.714 350 210 10 107 447 199 521 1.68e-30 130
Msa0056070 AT5G06600.2 29.714 350 210 10 107 447 198 520 1.79e-30 130
Msa0056070 AT4G39910.1 28.616 318 177 9 108 382 24 334 2.35e-30 124
Msa0056070 AT5G57990.1 28.135 327 209 10 85 394 85 402 1.91e-28 124
Msa0056070 AT2G22310.3 28.571 301 170 8 120 382 4 297 1.45e-25 109
Msa0056070 AT4G31670.1 29.167 312 189 11 86 379 153 450 3.53e-25 112
Msa0056070 AT1G17110.3 29.010 293 182 9 105 379 436 720 6.97e-25 112
Msa0056070 AT1G17110.1 29.010 293 182 9 105 379 436 720 6.97e-25 112
Msa0056070 AT1G17110.2 29.010 293 182 9 105 379 440 724 7.12e-25 112
Msa0056070 AT5G65450.2 29.293 297 178 11 106 382 347 631 9.11e-24 108
Msa0056070 AT5G65450.1 29.293 297 178 11 106 382 328 612 1.10e-23 108
Msa0056070 AT2G22310.2 28.041 296 168 8 125 382 4 292 1.13e-23 103
Msa0056070 AT3G14400.1 27.723 303 184 9 106 383 23 315 4.78e-23 105
Msa0056070 AT2G24640.2 28.428 299 182 12 105 382 2 289 5.37e-23 104
Msa0056070 AT2G24640.1 28.428 299 182 12 105 382 172 459 9.01e-23 105
Msa0056070 AT4G24560.1 26.599 297 189 10 106 383 541 827 9.79e-21 99.4
Msa0056070 AT5G46740.1 27.425 299 189 9 107 386 163 452 9.00e-19 92.4
Msa0056070 AT4G17895.1 26.689 296 187 8 107 385 176 458 4.37e-18 90.1
Msa0056070 AT5G46740.2 29.717 212 133 6 183 386 40 243 1.86e-16 84.3
Msa0056070 AT2G40930.1 32.117 137 80 4 255 385 769 898 3.90e-12 71.2
Msa0056070 AT2G40930.2 32.117 137 80 4 255 385 769 898 3.90e-12 71.2
Msa0056070 AT4G10590.4 30.282 142 95 3 255 395 748 886 1.11e-11 69.7
Msa0056070 AT4G10590.3 30.282 142 95 3 255 395 748 886 1.11e-11 69.7
Msa0056070 AT4G10590.1 30.282 142 95 3 255 395 748 886 1.11e-11 69.7
Msa0056070 AT4G10590.2 30.282 142 95 3 255 395 748 886 1.11e-11 69.7
Msa0056070 AT4G10570.1 30.282 142 95 3 255 395 749 887 1.46e-11 69.3

Find 246 sgRNAs with CRISPR-Local

Find 660 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTTCTTGCCTTGGAAATTT+TGG 0.078415 1_2:+11550100 None:intergenic
CTCATAGAAGTCTTCCATTT+TGG 0.162396 1_2:+11549213 None:intergenic
GCCCTAGTAATGGCAAATTT+TGG 0.167402 1_2:-11541699 Msa0056070:three_prime_UTR
ATCACCACATTTAATGTTTC+AGG 0.169289 1_2:+11545073 None:intergenic
TCATTATCTTGTGCAGTAAT+TGG 0.193512 1_2:+11547820 None:intergenic
CTCACTGTTGAAGAGCTTAA+TGG 0.199425 1_2:-11549136 Msa0056070:CDS
CTTCCTCTTGGATTTCAAAA+TGG 0.232071 1_2:-11545135 Msa0056070:CDS
ACCAGCTGAAAATGATGATA+TGG 0.234152 1_2:-11543020 Msa0056070:CDS
ATACCTAGTGTTGGATGTTT+TGG 0.236867 1_2:-11541729 Msa0056070:three_prime_UTR
TCAGTTGCATTTAAGTAAAA+AGG 0.243254 1_2:-11550240 Msa0056070:CDS
CATGAAGCTTCTTCTGAAAA+TGG 0.265957 1_2:+11548075 None:intergenic
CTCTGAAGCTTCTTCCAAAA+TGG 0.266543 1_2:-11549227 Msa0056070:CDS
GCTCCATCTGAAGCTGATTC+TGG 0.267792 1_2:-11545556 Msa0056070:CDS
TGTTTCTTCAGAAAGGAATA+AGG 0.296369 1_2:-11546508 Msa0056070:CDS
TGTTTGGACTGTCTGATTGA+TGG 0.310376 1_2:-11546683 Msa0056070:CDS
TGATGATATGGGAATCCTTT+GGG 0.320727 1_2:-11543008 Msa0056070:CDS
AGTTCAGCGGGGAATGAAAA+TGG 0.325298 1_2:+11548279 None:intergenic
GACGAACGAATGAATGAGTT+TGG 0.330367 1_2:+11551777 None:intergenic
TGAGCTGTGTAACGAGAAAA+AGG 0.337284 1_2:-11541945 Msa0056070:CDS
GGTTGCTCCAGTGGTTTAAC+AGG 0.343117 1_2:+11547649 None:intergenic
GAAGCCTCCAAGATTGATCT+AGG 0.343119 1_2:+11543144 None:intergenic
CAATCTTTGCAGATACTCCT+TGG 0.344327 1_2:+11544617 None:intergenic
AACAATTGAATGAGAAGAAA+TGG 0.348131 1_2:-11541792 Msa0056070:three_prime_UTR
ATGGGATAAGTTACTGTCTA+AGG 0.355200 1_2:-11547303 Msa0056070:intron
ACTGCATTCAGAGCACTCTT+TGG 0.357896 1_2:+11545372 None:intergenic
ATTACAAAGCCAGTCTGTTC+AGG 0.361510 1_2:-11550575 Msa0056070:CDS
CCTCAATATTTCTGAAGTTC+CGG 0.364596 1_2:+11550734 None:intergenic
ATTTCTTAGTTCCTTCCTCT+TGG 0.365604 1_2:-11545147 Msa0056070:CDS
GACTTCAAATGTTTCATCTC+AGG 0.367963 1_2:-11541882 Msa0056070:CDS
CCATCATATCTGAGAATGAT+TGG 0.370225 1_2:-11544675 Msa0056070:CDS
CCTTATCCCAGTTGGCCAAC+TGG 0.370897 1_2:+11544530 None:intergenic
TTGAACTATCGTTCTTGCCT+TGG 0.374035 1_2:+11550091 None:intergenic
GTCGAGGTAACCTTTGACAC+TGG 0.381143 1_2:+11547347 None:intergenic
GTTTGGACTGTCTGATTGAT+GGG 0.382003 1_2:-11546682 Msa0056070:CDS
TTCCAAAATTTGCCATTACT+AGG 0.382996 1_2:+11541697 None:intergenic
GTTTCTTCAGAAAGGAATAA+GGG 0.383733 1_2:-11546507 Msa0056070:CDS
TTCTCACGAGGACTGCTGTT+TGG 0.384368 1_2:-11546699 Msa0056070:CDS
TGAAAGTTGCATTGGAGAAA+AGG 0.384973 1_2:-11543244 Msa0056070:CDS
CCAAGTGGAACGCGGAAGTC+TGG 0.385243 1_2:-11550497 Msa0056070:CDS
TGTATGTATATATATACTTC+AGG 0.389422 1_2:-11541822 Msa0056070:three_prime_UTR
GATTCACGAAGTTCCGTGTT+TGG 0.390262 1_2:+11550428 None:intergenic
CTTGCACGGGATATTCTTGA+TGG 0.392912 1_2:-11546602 Msa0056070:CDS
GAAAATCAGATACTACAAAA+AGG 0.393670 1_2:-11542166 Msa0056070:CDS
AATCTTTGCAGATACTCCTT+GGG 0.394072 1_2:+11544618 None:intergenic
TCGTGTCAGCAGACACTTAT+CGG 0.397648 1_2:-11546649 Msa0056070:CDS
ATTCACGAAGTTCCGTGTTT+GGG 0.400571 1_2:+11550429 None:intergenic
CAGTTGGCCAACTGGGATAA+GGG 0.403224 1_2:-11544529 Msa0056070:CDS
GTGAGGACCAGTTGGCCAAC+TGG 0.404484 1_2:-11544537 Msa0056070:CDS
GTGTCAGAATTCTTCACAGC+TGG 0.405629 1_2:+11545097 None:intergenic
CCAATCATTCTCAGATATGA+TGG 0.406599 1_2:+11544675 None:intergenic
CCCGCAGGACTCACAAATCT+TGG 0.406645 1_2:-11550395 Msa0056070:CDS
CCAGTTGGCCAACTGGGATA+AGG 0.409175 1_2:-11544530 Msa0056070:CDS
CTTTCCTATGGTTGTACTGC+TGG 0.413935 1_2:+11547734 None:intergenic
ATGATGATATGGGAATCCTT+TGG 0.419564 1_2:-11543009 Msa0056070:CDS
TAGTGACTGGCTTCGTCAAT+GGG 0.420428 1_2:-11547611 Msa0056070:CDS
GGAAATGTTTCTGCGAAGAA+TGG 0.422571 1_2:-11544654 Msa0056070:CDS
ACAACCGGTGTTAGATCAAT+TGG 0.422700 1_2:-11550276 Msa0056070:CDS
TGATGAGCTTGTTACTAACT+TGG 0.424756 1_2:-11548106 Msa0056070:CDS
GATTGAGAAAATTAATGATT+CGG 0.430266 1_2:-11544599 Msa0056070:CDS
AGCTGAAAATTAAGCACATC+AGG 0.432949 1_2:+11549040 None:intergenic
TAAATCTGTTAAGAATGATC+TGG 0.436916 1_2:-11548043 Msa0056070:CDS
GTGGACGTTAACATATTTGC+TGG 0.436987 1_2:-11542103 Msa0056070:CDS
ATAGTGACTGGCTTCGTCAA+TGG 0.442998 1_2:-11547612 Msa0056070:CDS
GACTTCCGCGTTCCACTTGG+AGG 0.443325 1_2:+11550500 None:intergenic
TCCGAATTGCTTCTGTGCAT+TGG 0.444163 1_2:-11550528 Msa0056070:CDS
TCGTTTCTGTTTCTTCAGAA+AGG 0.445401 1_2:-11546515 Msa0056070:CDS
AAAATTTGGTATGCTTAAGA+TGG 0.445793 1_2:+11547899 None:intergenic
TGTAGGAAAATATACAAAAC+AGG 0.446519 1_2:-11550635 Msa0056070:intron
GATTCGGTGAATGCTACATC+TGG 0.447397 1_2:-11544583 Msa0056070:CDS
ACCAATGCACAGAAGCAATT+CGG 0.447609 1_2:+11550527 None:intergenic
ATCAATCTTGGAGGCTTCAA+AGG 0.447974 1_2:-11543139 Msa0056070:CDS
CATGAAAATCGAGATATTGC+TGG 0.451054 1_2:-11542049 Msa0056070:intron
TTGGAGTCTAAATGAAATGT+AGG 0.454424 1_2:+11545391 None:intergenic
GATAAGGGGAATAATGAAAG+TGG 0.455432 1_2:-11544514 Msa0056070:CDS
GGAGGTCCCTAGATCAATCT+TGG 0.456160 1_2:-11543151 Msa0056070:CDS
GTCATGAGAAGTTGTTCAAT+GGG 0.460741 1_2:-11545201 Msa0056070:CDS
AATGAGCAGATCAACGGCTC+GGG 0.465077 1_2:-11550793 Msa0056070:CDS
TTAGCACCAGTTGCTTGCTC+AGG 0.468543 1_2:+11545493 None:intergenic
AATTACACATATATCCTCAT+TGG 0.468861 1_2:+11543188 None:intergenic
ACCATGTAAATCCTTGTGCC+TGG 0.470791 1_2:-11541755 Msa0056070:three_prime_UTR
TCCAAAATTTGCCATTACTA+GGG 0.471190 1_2:+11541698 None:intergenic
CTTATGCCTGAGCAAGCAAC+TGG 0.475627 1_2:-11545499 Msa0056070:CDS
TTGAATGAGAAGAAATGGTT+TGG 0.476781 1_2:-11541787 Msa0056070:three_prime_UTR
CCAGCTGAAAATGATGATAT+GGG 0.477880 1_2:-11543019 Msa0056070:CDS
CCAGACTTCCGCGTTCCACT+TGG 0.478055 1_2:+11550497 None:intergenic
GTTTATTCATATACAAGCAT+TGG 0.479324 1_2:+11550345 None:intergenic
CAGGTTTGTGAAAGTTGCAT+TGG 0.480717 1_2:-11543252 Msa0056070:CDS
AGTCATGAGAAGTTGTTCAA+TGG 0.482782 1_2:-11545202 Msa0056070:CDS
GCAAGCAACTGGTGCTAAGC+GGG 0.487367 1_2:-11545488 Msa0056070:CDS
TGGTCTTGTTGCCCTAGTAA+TGG 0.487747 1_2:-11541709 Msa0056070:three_prime_UTR
ATTATTCCCCTTATCCCAGT+TGG 0.488176 1_2:+11544522 None:intergenic
CCATGTAAATCCTTGTGCCT+GGG 0.492793 1_2:-11541754 Msa0056070:three_prime_UTR
CCACGTCTGAGAATCAGTTC+AGG 0.492988 1_2:+11544847 None:intergenic
ACTGTCTGATTGATGGGGCT+CGG 0.493794 1_2:-11546676 Msa0056070:CDS
ATCATTTAAGCAACTTGCAC+GGG 0.495522 1_2:-11546615 Msa0056070:CDS
TCAATTCTACCTCTTTCCTA+TGG 0.497661 1_2:+11547722 None:intergenic
GAAATGTTTCTGCGAAGAAT+GGG 0.500530 1_2:-11544653 Msa0056070:CDS
GGCAATATGTGAGGACCAGT+TGG 0.509210 1_2:-11544545 Msa0056070:CDS
GGACTTTACCGTGTGAACAT+TGG 0.509591 1_2:+11547369 None:intergenic
TGTCAGAATTCTTCACAGCT+GGG 0.511169 1_2:+11545098 None:intergenic
TCAATCTTGGAGGCTTCAAA+GGG 0.512924 1_2:-11543138 Msa0056070:CDS
CCCAGGCACAAGGATTTACA+TGG 0.514041 1_2:+11541754 None:intergenic
AATGGAAGACTTCTATGAGT+TGG 0.518411 1_2:-11549209 Msa0056070:CDS
TAAGCGGGTGCTTGTTCCCG+AGG 0.518885 1_2:-11545473 Msa0056070:CDS
AGCGACTGTCTTCTAAAGCA+TGG 0.519590 1_2:-11547322 Msa0056070:CDS
ATTCTAATTTCTCTGAAGCA+AGG 0.526792 1_2:-11548017 Msa0056070:CDS
TGGTGCACTGCTCTGTGAAA+AGG 0.526975 1_2:-11545050 Msa0056070:intron
ACTAGATGAAAATGTCTCCA+TGG 0.527335 1_2:+11547942 None:intergenic
CGTGTCAGCAGACACTTATC+GGG 0.527748 1_2:-11546648 Msa0056070:CDS
AATGAGAAGAAATGGTTTGG+TGG 0.528192 1_2:-11541784 Msa0056070:three_prime_UTR
CGTACCGAGGGAGGGTTTCG+TGG 0.528383 1_2:-11541914 Msa0056070:CDS
CCAAGATTTGTGAGTCCTGC+GGG 0.528495 1_2:+11550395 None:intergenic
ATCTGGATCTTGTGAAGAGA+TGG 0.530762 1_2:-11544566 Msa0056070:CDS
ATGTGAACACAGGGCAATGG+TGG 0.532933 1_2:-11548137 Msa0056070:CDS
CGGTAAAGTCCCAGTGTCAA+AGG 0.533850 1_2:-11547357 Msa0056070:CDS
GGGAATAATGAAAGTGGGAA+TGG 0.533939 1_2:-11544508 Msa0056070:CDS
TTCTAATTTCTCTGAAGCAA+GGG 0.534535 1_2:-11548016 Msa0056070:CDS
GAACGCGGAAGTCTGGCATA+TGG 0.537243 1_2:-11550490 Msa0056070:CDS
TGTTTCATCTCAGGTTGTGT+AGG 0.539372 1_2:-11541873 Msa0056070:exon
TCGAGGTAACCTTTGACACT+GGG 0.539858 1_2:+11547348 None:intergenic
CTGGCAAGTATCAAGATATG+AGG 0.540752 1_2:+11547753 None:intergenic
TTTGTAGGTTGCAGCAGTGG+TGG 0.543504 1_2:-11545597 Msa0056070:intron
GTATCATCATCCCCTTGTCT+CGG 0.543714 1_2:+11550756 None:intergenic
CATAAAATACAGTATGGTGG+AGG 0.543820 1_2:-11546731 Msa0056070:intron
CAACTTACAGAAGACTCCCT+TGG 0.543918 1_2:+11544814 None:intergenic
AGACAAGGGGATGATGATAC+CGG 0.544080 1_2:-11550753 Msa0056070:CDS
ATTTGTTGAAACAGATCGAC+GGG 0.548666 1_2:-11543115 Msa0056070:CDS
GCAAGGGTAGCTGACAGTAA+TGG 0.549569 1_2:-11548000 Msa0056070:CDS
TGGTGCATACTAAGTTCAGC+GGG 0.551015 1_2:+11548267 None:intergenic
GCCTGGGGCATACCTAGTGT+TGG 0.553296 1_2:-11541738 Msa0056070:three_prime_UTR
TGAGGACCAGTTGGCCAACT+GGG 0.553449 1_2:-11544536 Msa0056070:CDS
TCACATGAGACACACTTCCC+CGG 0.555529 1_2:+11550060 None:intergenic
AGCACTCACGACTCATTGAA+AGG 0.555742 1_2:-11544873 Msa0056070:CDS
TTCCGCGTTCCACTTGGAGG+CGG 0.556093 1_2:+11550503 None:intergenic
CTTCGTACAATACCTTTGGA+AGG 0.556884 1_2:+11549002 None:intergenic
AGTTTCACAATCTTTACCCA+TGG 0.557454 1_2:-11547959 Msa0056070:CDS
TAGTCGTTCCAAAATTTCCA+AGG 0.557541 1_2:-11550108 Msa0056070:CDS
AAGCGGGTGCTTGTTCCCGA+GGG 0.558588 1_2:-11545472 Msa0056070:CDS
AGTACTACGTGTCTAGATCA+TGG 0.559586 1_2:-11546562 Msa0056070:CDS
GCAATGACAGAAGCAATGTC+AGG 0.560586 1_2:+11550144 None:intergenic
CAGAAAGGAATAAGGGGTGA+TGG 0.560626 1_2:-11546500 Msa0056070:CDS
CATGTAAATCCTTGTGCCTG+GGG 0.560924 1_2:-11541753 Msa0056070:three_prime_UTR
AATCATTTAAGCAACTTGCA+CGG 0.561749 1_2:-11546616 Msa0056070:CDS
CTAGATGAAAATGTCTCCAT+GGG 0.563087 1_2:+11547943 None:intergenic
CACATCAAGGATGTGAACAC+AGG 0.563722 1_2:-11548147 Msa0056070:CDS
GATACACAGCGTACCGAGGG+AGG 0.565981 1_2:-11541923 Msa0056070:CDS
CCGGAACTTCAGAAATATTG+AGG 0.567216 1_2:-11550734 Msa0056070:intron
GAGTTGGAGTTGAATGTCAA+GGG 0.567832 1_2:-11549193 Msa0056070:CDS
CGGTGTTAGATCAATTGGCT+CGG 0.573018 1_2:-11550271 Msa0056070:CDS
AGCAAGCAACTGGTGCTAAG+CGG 0.573541 1_2:-11545489 Msa0056070:CDS
TGTATGGCCAAAATTTCAAG+TGG 0.575617 1_2:-11541648 Msa0056070:three_prime_UTR
GACGGGTTTCTAAACGCTCC+AGG 0.575943 1_2:-11543098 Msa0056070:CDS
GAAACATTAAATGTGGTGAT+TGG 0.576683 1_2:-11545070 Msa0056070:CDS
GCGACTGTCTTCTAAAGCAT+GGG 0.577989 1_2:-11547321 Msa0056070:CDS
TGAAGCTCCTGTTAAACCAC+TGG 0.578029 1_2:-11547656 Msa0056070:CDS
TGTAATTCTTGTACGCGGAA+AGG 0.578271 1_2:-11543172 Msa0056070:CDS
TAAACTTAATTATTCCAATG+AGG 0.578751 1_2:-11543202 Msa0056070:CDS
TCATTACATTGCACACATCA+AGG 0.578762 1_2:-11548160 Msa0056070:CDS
CAATGAGCAGATCAACGGCT+CGG 0.579415 1_2:-11550794 Msa0056070:CDS
GAAGCAATGTCAGGAACTCA+TGG 0.579751 1_2:+11550153 None:intergenic
TGGAGTCTAAATGAAATGTA+GGG 0.580760 1_2:+11545392 None:intergenic
GATGAGCTTGTTACTAACTT+GGG 0.581232 1_2:-11548105 Msa0056070:CDS
TTTGTGAGTCATGTAAAACA+AGG 0.582663 1_2:-11549099 Msa0056070:CDS
TGACGAAAATACTACACTTG+TGG 0.582828 1_2:-11542122 Msa0056070:CDS
ATCAGCTTCAGATGGAGCAT+CGG 0.583704 1_2:+11545561 None:intergenic
TTTGCATGGAGGACTCTATG+AGG 0.584858 1_2:-11545330 Msa0056070:intron
GACGTGGTGCTATATTTCCA+AGG 0.585410 1_2:-11544831 Msa0056070:CDS
CTTTGTGGATACTAGGCAGG+TGG 0.586554 1_2:-11544703 Msa0056070:intron
GCAGTACAACCATAGGAAAG+AGG 0.586771 1_2:-11547731 Msa0056070:CDS
GCGCTATGTCTTCCTTCCAA+AGG 0.588885 1_2:-11549014 Msa0056070:intron
AAGCCTCCAAGATTGATCTA+GGG 0.589124 1_2:+11543145 None:intergenic
CTAGGTATGCCCCAGGCACA+AGG 0.590432 1_2:+11541744 None:intergenic
TGAGTTGGAGTTGAATGTCA+AGG 0.591934 1_2:-11549194 Msa0056070:CDS
TATAATACAAGACTCAGCCC+TGG 0.592232 1_2:+11550817 None:intergenic
GGTCCAGAATCAGCTTCAGA+TGG 0.594090 1_2:+11545553 None:intergenic
TGGAGATCAGATTATTGTGA+GGG 0.594741 1_2:-11542083 Msa0056070:CDS
ACAAACTTGGCTTACCCCAA+AGG 0.594910 1_2:+11542993 None:intergenic
TTTGGACTGTCTGATTGATG+GGG 0.595037 1_2:-11546681 Msa0056070:CDS
AGTTGGCCAACTGGGATAAG+GGG 0.595215 1_2:-11544528 Msa0056070:CDS
ACACGACAACCTGAACAGAC+TGG 0.595647 1_2:+11550566 None:intergenic
AATATGTGCAATCTAGAGAG+AGG 0.599323 1_2:+11545167 None:intergenic
GGTGTAGGTTATTAAAACAA+AGG 0.599431 1_2:-11545234 Msa0056070:intron
ATAAGGGGAATAATGAAAGT+GGG 0.600051 1_2:-11544513 Msa0056070:CDS
AGGATGTGAACACAGGGCAA+TGG 0.601400 1_2:-11548140 Msa0056070:CDS
TATATCAATTCAGACTGAGA+TGG 0.603009 1_2:+11548231 None:intergenic
GTAGCTGACAGTAATGGAAG+TGG 0.604191 1_2:-11547994 Msa0056070:CDS
ATATGTGCAATCTAGAGAGA+GGG 0.605170 1_2:+11545168 None:intergenic
GGTCCCTAGATCAATCTTGG+AGG 0.605301 1_2:-11543148 Msa0056070:CDS
GGGCTGAAAATGTTACTCCA+AGG 0.605343 1_2:-11547591 Msa0056070:intron
AGAAGACAGTCGCTTTGTCG+AGG 0.606192 1_2:+11547331 None:intergenic
AAAATAAAAGACCGAGACAA+GGG 0.606853 1_2:-11550767 Msa0056070:CDS
GAATCTGCTAATTCACCCGC+AGG 0.608439 1_2:-11550410 Msa0056070:CDS
AAGGGAACTGCAGCTAATAG+TGG 0.609721 1_2:-11548183 Msa0056070:CDS
CTGGAGATCAGATTATTGTG+AGG 0.610377 1_2:-11542084 Msa0056070:CDS
GATTTGTTGAAACAGATCGA+CGG 0.612924 1_2:-11543116 Msa0056070:CDS
CTTGCCAGCAGTACAACCAT+AGG 0.613925 1_2:-11547738 Msa0056070:CDS
AATTGAGTCGTATCAGTGAG+AGG 0.615704 1_2:-11547705 Msa0056070:CDS
TTCGATCAAGACTTGTCCTG+AGG 0.617792 1_2:-11544479 Msa0056070:intron
AGACCAAAACATCCAACACT+AGG 0.618322 1_2:+11541726 None:intergenic
TTGTGAGTCATGTAAAACAA+GGG 0.618657 1_2:-11549098 Msa0056070:CDS
GATGATATGGGAATCCTTTG+GGG 0.619435 1_2:-11543007 Msa0056070:intron
CCTGAACTGATTCTCAGACG+TGG 0.622525 1_2:-11544847 Msa0056070:CDS
TTTCTTCAGAAAGGAATAAG+GGG 0.623466 1_2:-11546506 Msa0056070:CDS
TCCAACACTAGGTATGCCCC+AGG 0.627453 1_2:+11541737 None:intergenic
ATAAAATACAGTATGGTGGA+GGG 0.629754 1_2:-11546730 Msa0056070:intron
AATTCTTGTACGCGGAAAGG+AGG 0.630595 1_2:-11543169 Msa0056070:CDS
CTTCATAAAATACAGTATGG+TGG 0.632041 1_2:-11546734 Msa0056070:intron
GTATGGCCAAAATTTCAAGT+GGG 0.632694 1_2:-11541647 Msa0056070:three_prime_UTR
TTATACAATGAGCAGATCAA+CGG 0.633018 1_2:-11550799 Msa0056070:exon
TCTTGGCTTTGACCCAAACA+CGG 0.633556 1_2:-11550441 Msa0056070:CDS
TGTGAACACAGGGCAATGGT+GGG 0.634151 1_2:-11548136 Msa0056070:CDS
AAGGATACACAGCGTACCGA+GGG 0.636484 1_2:-11541926 Msa0056070:CDS
TCCAAGATTTGTGAGTCCTG+CGG 0.638956 1_2:+11550394 None:intergenic
ATGAGCAGATCAACGGCTCG+GGG 0.642053 1_2:-11550792 Msa0056070:CDS
TTCCGCCTCCAAGTGGAACG+CGG 0.644073 1_2:-11550505 Msa0056070:CDS
TATGGCCAAAATTTCAAGTG+GGG 0.648080 1_2:-11541646 None:intergenic
CAGTCCTCGTGAGAAAGTGT+TGG 0.651283 1_2:+11546707 None:intergenic
TGTTCCACGAAACCCTCCCT+CGG 0.651998 1_2:+11541910 None:intergenic
GCATTGGTTCCGCCTCCAAG+TGG 0.652496 1_2:-11550512 Msa0056070:CDS
GTGGTGCATACTAAGTTCAG+CGG 0.654954 1_2:+11548266 None:intergenic
ATACACAGCGTACCGAGGGA+GGG 0.655824 1_2:-11541922 Msa0056070:CDS
CGTCTGAGAATCAGTTCAGG+AGG 0.656261 1_2:+11544850 None:intergenic
ACGTGGTGCTATATTTCCAA+GGG 0.657770 1_2:-11544830 Msa0056070:CDS
TGGGGTGCTACTGAAACCCA+AGG 0.657885 1_2:-11544634 Msa0056070:CDS
AAATAAAAGACCGAGACAAG+GGG 0.661443 1_2:-11550766 Msa0056070:CDS
TATGTGCAATCTAGAGAGAG+GGG 0.661724 1_2:+11545169 None:intergenic
ACATCAAGGATGTGAACACA+GGG 0.662633 1_2:-11548146 Msa0056070:CDS
CTATGAAGGTGCTCACAATG+TGG 0.664096 1_2:-11549256 Msa0056070:intron
AAAGGATACACAGCGTACCG+AGG 0.665910 1_2:-11541927 Msa0056070:CDS
GTCAGCTGTTCTGATACACA+AGG 0.666311 1_2:-11548202 Msa0056070:CDS
ATGGCCAAAATTTCAAGTGG+GGG 0.668491 1_2:-11541645 None:intergenic
GAGATGGCTCAGACAATCTG+TGG 0.671343 1_2:+11548247 None:intergenic
ACATCTATCCAATGTTCACA+CGG 0.672493 1_2:-11547377 Msa0056070:CDS
GGACAACTAATAGCTGCTGT+TGG 0.674899 1_2:+11545532 None:intergenic
GCAGCTATTAGTTGTCCACA+TGG 0.675814 1_2:-11545526 Msa0056070:CDS
CACACCTGAAACATTAAATG+TGG 0.675913 1_2:-11545077 Msa0056070:CDS
CTTCTTCTGAAAATGGACAA+CGG 0.680788 1_2:+11548082 None:intergenic
CGAGCCAATTGATCTAACAC+CGG 0.691594 1_2:+11550272 None:intergenic
CATTAAGCTCTTCAACAGTG+AGG 0.699221 1_2:+11549137 None:intergenic
TGAAGAGATGGCAATATGTG+AGG 0.706020 1_2:-11544554 Msa0056070:CDS
AGGGCCAACACTTTCTCACG+AGG 0.708277 1_2:-11546711 Msa0056070:CDS
AAATGTTTCTGCGAAGAATG+GGG 0.715071 1_2:-11544652 Msa0056070:CDS
ATATGTGTAATTCTTGTACG+CGG 0.741407 1_2:-11543177 Msa0056070:CDS
TCAGGCATAAGTTGTCCATG+TGG 0.742403 1_2:+11545511 None:intergenic
TCAGCTGTTCTGATACACAA+GGG 0.748218 1_2:-11548201 Msa0056070:CDS
GGTGCATACTAAGTTCAGCG+GGG 0.797503 1_2:+11548268 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTGATTTGTAAAAAAAAAAA+AGG - chr1_2:11542319-11542338 Msa0056070:intron 10.0%
!! ATAATAATTAAAACATCATT+TGG + chr1_2:11543804-11543823 None:intergenic 10.0%
!!! ATTTTTTTATAATTGGTAAT+GGG - chr1_2:11546222-11546241 Msa0056070:intron 10.0%
!!! TTGTTTTTTAACTTATCAAA+TGG - chr1_2:11542739-11542758 Msa0056070:intron 15.0%
!!! TTTTGGTTCAATTTTTTTTT+TGG - chr1_2:11544522-11544541 Msa0056070:CDS 15.0%
!!! TTTGGTTCAATTTTTTTTTT+GGG - chr1_2:11544523-11544542 Msa0056070:CDS 15.0%
!! TGAATACATATATCATAAAA+TGG + chr1_2:11545075-11545094 None:intergenic 15.0%
!!! ATTTTTCATATTGATTTAGA+AGG + chr1_2:11546192-11546211 None:intergenic 15.0%
!!! GATTTTTTTATAATTGGTAA+TGG - chr1_2:11546221-11546240 Msa0056070:intron 15.0%
!!! TTTTTTTATAATTGGTAATG+GGG - chr1_2:11546223-11546242 Msa0056070:intron 15.0%
!!! TGTTTTTATTTTAAGCTTTA+TGG - chr1_2:11546981-11547000 Msa0056070:intron 15.0%
!!! GTTTTTATTTTAAGCTTTAT+GGG - chr1_2:11546982-11547001 Msa0056070:intron 15.0%
!!! TTTTTATTTTAAGCTTTATG+GGG - chr1_2:11546983-11547002 Msa0056070:intron 15.0%
!! TAAACTTCATATAAATTAAG+AGG + chr1_2:11549120-11549139 None:intergenic 15.0%
!! TCTTAATTTATATGAAGTTT+AGG - chr1_2:11549119-11549138 Msa0056070:CDS 15.0%
!! CTTAATTTATATGAAGTTTA+GGG - chr1_2:11549120-11549139 Msa0056070:CDS 15.0%
!! AAAAATTAACTGAAATAAGT+TGG + chr1_2:11550028-11550047 None:intergenic 15.0%
!! TATTCTTGAACTAAATTTAT+TGG - chr1_2:11550070-11550089 Msa0056070:CDS 15.0%
!!! TTATTTTGTAGTTTAAATGT+TGG - chr1_2:11550466-11550485 Msa0056070:CDS 15.0%
!!! TAATTTTTTATTTCCATATC+TGG - chr1_2:11551215-11551234 Msa0056070:intron 15.0%
!!! TAGATATAGCTTGTTTATTT+TGG - chr1_2:11542466-11542485 Msa0056070:intron 20.0%
!!! AGATATAGCTTGTTTATTTT+GGG - chr1_2:11542467-11542486 Msa0056070:intron 20.0%
!! TGTAATTAGATTTGAGTAAT+GGG - chr1_2:11542490-11542509 Msa0056070:intron 20.0%
!! AATGCAATAAGCTAAAAAAA+TGG + chr1_2:11543438-11543457 None:intergenic 20.0%
!! TTGCACAAAAAATAATTCAA+GGG + chr1_2:11543763-11543782 None:intergenic 20.0%
!! TTTGCACAAAAAATAATTCA+AGG + chr1_2:11543764-11543783 None:intergenic 20.0%
!! GATAATATAATTATCCTTAC+TGG - chr1_2:11543880-11543899 Msa0056070:intron 20.0%
!!! TCATTGTTTACTTCATATTT+TGG - chr1_2:11544505-11544524 Msa0056070:CDS 20.0%
!!! TTGGTTCAATTTTTTTTTTG+GGG - chr1_2:11544524-11544543 Msa0056070:CDS 20.0%
!!! TCTTTATGTAATTTGATTTG+AGG + chr1_2:11544703-11544722 None:intergenic 20.0%
!! TCACTATAAATCCAAAAATA+CGG + chr1_2:11545799-11545818 None:intergenic 20.0%
!!! TGTTATATTTTATTTGTGTG+TGG - chr1_2:11545904-11545923 Msa0056070:intron 20.0%
!!! GGTTATTTCACTTAATTTAT+GGG - chr1_2:11545985-11546004 Msa0056070:intron 20.0%
!!! GCTTGAGATTTTTTTATAAT+TGG - chr1_2:11546215-11546234 Msa0056070:intron 20.0%
!! TCACTCTGATAAAAAAAAAA+AGG + chr1_2:11546335-11546354 None:intergenic 20.0%
!!! TTTTTTTTTTTATCAGAGTG+AGG - chr1_2:11546334-11546353 Msa0056070:intron 20.0%
!!! TTTATGCTGTAGTTTTTTTT+TGG - chr1_2:11546480-11546499 Msa0056070:intron 20.0%
!!! TTATGCTGTAGTTTTTTTTT+GGG - chr1_2:11546481-11546500 Msa0056070:intron 20.0%
!!! TATTCCATTTTCTATTATTC+TGG - chr1_2:11546954-11546973 Msa0056070:intron 20.0%
!! ATTTCCAGAATAATAGAAAA+TGG + chr1_2:11546961-11546980 None:intergenic 20.0%
!!! CTAGCTATAAATTTTCTTAT+GGG + chr1_2:11547406-11547425 None:intergenic 20.0%
!!! ACTAGCTATAAATTTTCTTA+TGG + chr1_2:11547407-11547426 None:intergenic 20.0%
!! AAAAATCAGAACAAATAGTT+AGG + chr1_2:11547724-11547743 None:intergenic 20.0%
!!! CAAATTAAATTCTGTTTTCA+TGG - chr1_2:11548169-11548188 Msa0056070:CDS 20.0%
!! GATTGAGAAAATTAATGATT+CGG - chr1_2:11548825-11548844 Msa0056070:intron 20.0%
!! TTAGCTTCATATAAATTAAG+AGG + chr1_2:11549239-11549258 None:intergenic 20.0%
!! TCTTAATTTATATGAAGCTA+AGG - chr1_2:11549238-11549257 Msa0056070:CDS 20.0%
!! CTTAATTTATATGAAGCTAA+GGG - chr1_2:11549239-11549258 Msa0056070:CDS 20.0%
!! TTATAGATTATGGCTTATAA+CGG - chr1_2:11549289-11549308 Msa0056070:intron 20.0%
!! TAGGAAAATTAGAAAAATCA+AGG + chr1_2:11549749-11549768 None:intergenic 20.0%
!!! TTTAGTTCAAGAATATACAA+AGG + chr1_2:11550065-11550084 None:intergenic 20.0%
!! TAAACTTAATTATTCCAATG+AGG - chr1_2:11550222-11550241 Msa0056070:CDS 20.0%
!!! AGAATTTTCACAAAATTCAT+TGG + chr1_2:11550663-11550682 None:intergenic 20.0%
!! TCATGTCATCATATAATAAA+AGG - chr1_2:11550846-11550865 Msa0056070:intron 20.0%
!! CATGTCATCATATAATAAAA+GGG - chr1_2:11550847-11550866 Msa0056070:intron 20.0%
!!! TGTAATTTTGCTTAATCTAA+CGG + chr1_2:11550929-11550948 None:intergenic 20.0%
!! TTATTATTCATTGTCCATAT+TGG - chr1_2:11550954-11550973 Msa0056070:intron 20.0%
!! TGTATGTATATATATACTTC+AGG - chr1_2:11551602-11551621 Msa0056070:intron 20.0%
!!! TTATATCCAGATTTTATGTA+TGG - chr1_2:11551760-11551779 Msa0056070:five_prime_UTR 20.0%
!! ATTTGCTGATTGAAATTTCT+AGG - chr1_2:11541864-11541883 Msa0056070:exon 25.0%
!! TTTGCTGATTGAAATTTCTA+GGG - chr1_2:11541865-11541884 Msa0056070:exon 25.0%
!! CATTTACTTGTGTCATTAAA+TGG + chr1_2:11542093-11542112 None:intergenic 25.0%
! GTGTAATTAGATTTGAGTAA+TGG - chr1_2:11542489-11542508 Msa0056070:intron 25.0%
!!! TGCTTTTTTTTTTCTTTTCC+AGG - chr1_2:11542589-11542608 Msa0056070:intron 25.0%
!!! GCTTTTTTTTTTCTTTTCCA+GGG - chr1_2:11542590-11542609 Msa0056070:intron 25.0%
! CAAATGGAATTAGAACTTAT+TGG - chr1_2:11542755-11542774 Msa0056070:intron 25.0%
! TGTAGGAAAATATACAAAAC+AGG - chr1_2:11542789-11542808 Msa0056070:intron 25.0%
! GTTTATTCATATACAAGCAT+TGG + chr1_2:11543082-11543101 None:intergenic 25.0%
! TCAGTTGCATTTAAGTAAAA+AGG - chr1_2:11543184-11543203 Msa0056070:CDS 25.0%
! ATTATAAATCTCTGTCTTTG+TGG - chr1_2:11543455-11543474 Msa0056070:intron 25.0%
! TTATAAATCTCTGTCTTTGT+GGG - chr1_2:11543456-11543475 Msa0056070:intron 25.0%
! TCACATATGATAGAACATTA+TGG - chr1_2:11543517-11543536 Msa0056070:intron 25.0%
! AGTAAACAATGAAAAACACA+AGG + chr1_2:11544497-11544516 None:intergenic 25.0%
! ATACTCCAGTATATATATTC+TGG - chr1_2:11544585-11544604 Msa0056070:CDS 25.0%
! TAAGTCCAGAATATATATAC+TGG + chr1_2:11544593-11544612 None:intergenic 25.0%
! AAAATTAGATATCCTCTTTG+TGG - chr1_2:11544614-11544633 Msa0056070:CDS 25.0%
!! AAAAAAAACTGACAGTTTTC+AGG + chr1_2:11544654-11544673 None:intergenic 25.0%
! ACTGTTCAAATCAAATATCT+TGG - chr1_2:11544743-11544762 Msa0056070:intron 25.0%
!! GAAAGAGAAAGAACTTTTAA+CGG - chr1_2:11544859-11544878 Msa0056070:CDS 25.0%
!! AGTTTTGCCAAGTAAAATAA+TGG + chr1_2:11544901-11544920 None:intergenic 25.0%
!!! TCATTTTATTTTGTTTCCTC+TGG - chr1_2:11545092-11545111 Msa0056070:CDS 25.0%
! TAAATCTGTTAAGAATGATC+TGG - chr1_2:11545381-11545400 Msa0056070:CDS 25.0%
! AAAATTTGGTATGCTTAAGA+TGG + chr1_2:11545528-11545547 None:intergenic 25.0%
!!! ACCAAATTTTTTAGTGAGAA+CGG - chr1_2:11545538-11545557 Msa0056070:CDS 25.0%
!!! ATTTTTGGATTTATAGTGAC+TGG - chr1_2:11545800-11545819 Msa0056070:intron 25.0%
!! GGGTTATTTCACTTAATTTA+TGG - chr1_2:11545984-11546003 Msa0056070:intron 25.0%
!!! ATGATTCCATTTTTTGATCT+TGG - chr1_2:11546162-11546181 Msa0056070:intron 25.0%
!! TTCTATTCTAAGTATTGTGA+TGG - chr1_2:11546287-11546306 Msa0056070:intron 25.0%
! ATTAGCAACAATGACATTAT+AGG + chr1_2:11546642-11546661 None:intergenic 25.0%
! ATGCTTCATAAAATACAGTA+TGG - chr1_2:11546687-11546706 Msa0056070:CDS 25.0%
! AAAGCTAATAACAAAACAGA+AGG - chr1_2:11547080-11547099 Msa0056070:intron 25.0%
! AAGCTAATAACAAAACAGAA+GGG - chr1_2:11547081-11547100 Msa0056070:intron 25.0%
! AAAATTGCGTTGTATTATTG+TGG - chr1_2:11547199-11547218 Msa0056070:intron 25.0%
! CTATACTAAACTAAACTAAC+TGG - chr1_2:11547310-11547329 Msa0056070:CDS 25.0%
!! CTATAAATTTTCTTATGGGT+GGG + chr1_2:11547402-11547421 None:intergenic 25.0%
! AAGAAAATTTATAGCTAGTG+AGG - chr1_2:11547408-11547427 Msa0056070:intron 25.0%
! AGAAAATTTATAGCTAGTGA+GGG - chr1_2:11547409-11547428 Msa0056070:intron 25.0%
! ATGATACCATATTAGGTATT+GGG + chr1_2:11547522-11547541 None:intergenic 25.0%
! AATGATACCATATTAGGTAT+TGG + chr1_2:11547523-11547542 None:intergenic 25.0%
! ATAGGAAATGATACCATATT+AGG + chr1_2:11547529-11547548 None:intergenic 25.0%
! ATTTCCTATCCTAAATCTAT+TGG - chr1_2:11547540-11547559 Msa0056070:intron 25.0%
! TTTCCTATCCTAAATCTATT+GGG - chr1_2:11547541-11547560 Msa0056070:intron 25.0%
!!! AAATAGTTAGGTTTTGGAAT+GGG + chr1_2:11547712-11547731 None:intergenic 25.0%
! AAAAGTAAACTCAGATCAAA+AGG + chr1_2:11547810-11547829 None:intergenic 25.0%
! TCAAGCATAGAAAAATGAAA+TGG + chr1_2:11548454-11548473 None:intergenic 25.0%
! ATGATATTCAAAATGACGAA+GGG + chr1_2:11548650-11548669 None:intergenic 25.0%
! AATGATATTCAAAATGACGA+AGG + chr1_2:11548651-11548670 None:intergenic 25.0%
!! ATTCTAATTTCTGAAAGACT+TGG + chr1_2:11549054-11549073 None:intergenic 25.0%
! ATTAGACAACTAATCCTTTA+TGG - chr1_2:11549089-11549108 Msa0056070:CDS 25.0%
! ATTAAGAGGAAATACCATAA+AGG + chr1_2:11549106-11549125 None:intergenic 25.0%
! ATTAGACAACTAATCCTTTA+TGG - chr1_2:11549089-11549108 Msa0056070:CDS 25.0%
!! ATAAGCTAGCTTATAGATTA+TGG - chr1_2:11549279-11549298 Msa0056070:intron 25.0%
! ATCTTTAGCATTACTCATAA+CGG - chr1_2:11549491-11549510 Msa0056070:intron 25.0%
! ATGTGATGAAAATAGGAAAT+AGG + chr1_2:11549768-11549787 None:intergenic 25.0%
!!! TAACTGAAATAAGTTGGTAA+TGG + chr1_2:11550022-11550041 None:intergenic 25.0%
! CAAGTTTGTATTCTCTTTAT+AGG - chr1_2:11550093-11550112 Msa0056070:CDS 25.0%
! AATTACACATATATCCTCAT+TGG + chr1_2:11550239-11550258 None:intergenic 25.0%
! ATATCAATACAGAACAAACT+TGG + chr1_2:11550447-11550466 None:intergenic 25.0%
! CTAACTTTATGTGGTTAAAA+TGG - chr1_2:11550493-11550512 Msa0056070:CDS 25.0%
! ACTTGTAGTAGACATAAATT+AGG - chr1_2:11551084-11551103 Msa0056070:intron 25.0%
! CTTGTAGTAGACATAAATTA+GGG - chr1_2:11551085-11551104 Msa0056070:intron 25.0%
! GAAAATCAGATACTACAAAA+AGG - chr1_2:11551258-11551277 Msa0056070:intron 25.0%
! AACAATTGAATGAGAAGAAA+TGG - chr1_2:11551632-11551651 Msa0056070:intron 25.0%
! ATTTTCACAAGTTCACTCTA+TGG + chr1_2:11541981-11542000 None:intergenic 30.0%
TTATACAATGAGCAGATCAA+CGG - chr1_2:11542625-11542644 Msa0056070:intron 30.0%
AAAAATAAAAGACCGAGACA+AGG - chr1_2:11542656-11542675 Msa0056070:intron 30.0%
AAAATAAAAGACCGAGACAA+GGG - chr1_2:11542657-11542676 Msa0056070:intron 30.0%
! CAGAAATATTGAGGTACTAT+AGG - chr1_2:11542699-11542718 Msa0056070:intron 30.0%
TATTGGTACTTTCTTTGTGT+AGG - chr1_2:11542772-11542791 Msa0056070:intron 30.0%
!!! TCTGATTTTGTTGATAGTCT+TGG - chr1_2:11542966-11542985 Msa0056070:intron 30.0%
!! ATGAATAAACGTTTTCGAGA+AGG - chr1_2:11543092-11543111 Msa0056070:CDS 30.0%
!! AGATATTTTTCAGCAACAAC+CGG - chr1_2:11543133-11543152 Msa0056070:CDS 30.0%
TTCTCCATTTGTAAAAACGT+TGG - chr1_2:11543220-11543239 Msa0056070:CDS 30.0%
! AACTCCAACGTTTTTACAAA+TGG + chr1_2:11543227-11543246 None:intergenic 30.0%
ATTTGTAAAAACGTTGGAGT+TGG - chr1_2:11543226-11543245 Msa0056070:CDS 30.0%
TATAAATCTCTGTCTTTGTG+GGG - chr1_2:11543457-11543476 Msa0056070:intron 30.0%
!!! GTTTTATTTGTTACAGACAC+TGG + chr1_2:11543712-11543731 None:intergenic 30.0%
! TTTTGTGCTGAATTAACGTT+TGG - chr1_2:11543823-11543842 Msa0056070:intron 30.0%
AACACAAACACTTCAAGAAA+AGG + chr1_2:11544082-11544101 None:intergenic 30.0%
! TTGAAGTGTTTGTGTTTCAT+TGG - chr1_2:11544086-11544105 Msa0056070:intron 30.0%
! ATTTTCCCACTTTACTATGA+AGG - chr1_2:11544154-11544173 Msa0056070:intron 30.0%
TTTGTGAGTCATGTAAAACA+AGG - chr1_2:11544325-11544344 Msa0056070:intron 30.0%
TTGTGAGTCATGTAAAACAA+GGG - chr1_2:11544326-11544345 Msa0056070:intron 30.0%
TTTAACGGTTATACAGAAGA+AGG - chr1_2:11544874-11544893 Msa0056070:CDS 30.0%
!! AGAAGGACCATTATTTTACT+TGG - chr1_2:11544891-11544910 Msa0056070:intron 30.0%
! TTTTACTTGGCAAAACTGTT+TGG - chr1_2:11544904-11544923 Msa0056070:intron 30.0%
!! CAAAACTGTTTGGTGTATTA+TGG - chr1_2:11544914-11544933 Msa0056070:intron 30.0%
TTGGTGTATTATGGCTAATT+TGG - chr1_2:11544923-11544942 Msa0056070:intron 30.0%
!!! TACATGCTTTTTCTTTCTCT+GGG - chr1_2:11545003-11545022 Msa0056070:intron 30.0%
TATATCAATTCAGACTGAGA+TGG + chr1_2:11545196-11545215 None:intergenic 30.0%
!! ATTCTAATTTCTCTGAAGCA+AGG - chr1_2:11545407-11545426 Msa0056070:CDS 30.0%
!! TTCTAATTTCTCTGAAGCAA+GGG - chr1_2:11545408-11545427 Msa0056070:CDS 30.0%
!!! CCAAATTTTTTAGTGAGAAC+GGG - chr1_2:11545539-11545558 Msa0056070:CDS 30.0%
!!! CAAATTTTTTAGTGAGAACG+GGG - chr1_2:11545540-11545559 Msa0056070:CDS 30.0%
!!! AAATTTTTTAGTGAGAACGG+GGG - chr1_2:11545541-11545560 Msa0056070:CDS 30.0%
TCATTATCTTGTGCAGTAAT+TGG + chr1_2:11545607-11545626 None:intergenic 30.0%
ATCTCTTCACAAAAATGAGA+AGG + chr1_2:11545637-11545656 None:intergenic 30.0%
GCATATGCTTTATGTATTCT+TGG - chr1_2:11545861-11545880 Msa0056070:intron 30.0%
! ATTCCTTGTATCATTTGCTA+GGG - chr1_2:11545959-11545978 Msa0056070:intron 30.0%
!! AGTATTGTGATGGATAATAG+TGG - chr1_2:11546297-11546316 Msa0056070:intron 30.0%
!! CTGTATTTTATGAAGCATCA+AGG + chr1_2:11546685-11546704 None:intergenic 30.0%
CTTCATAAAATACAGTATGG+TGG - chr1_2:11546690-11546709 Msa0056070:CDS 30.0%
! ATAAAATACAGTATGGTGGA+GGG - chr1_2:11546694-11546713 Msa0056070:CDS 30.0%
AATCATTTAAGCAACTTGCA+CGG - chr1_2:11546808-11546827 Msa0056070:intron 30.0%
TGTTTCTTCAGAAAGGAATA+AGG - chr1_2:11546916-11546935 Msa0056070:intron 30.0%
GTTTCTTCAGAAAGGAATAA+GGG - chr1_2:11546917-11546936 Msa0056070:intron 30.0%
TTTCTTCAGAAAGGAATAAG+GGG - chr1_2:11546918-11546937 Msa0056070:intron 30.0%
TCTCAGATCATACATAATAC+TGG + chr1_2:11547009-11547028 None:intergenic 30.0%
! GTATAAGCATTGTCTTGTAT+TGG + chr1_2:11547135-11547154 None:intergenic 30.0%
TACAAGACAATGCTTATACT+AGG - chr1_2:11547136-11547155 Msa0056070:intron 30.0%
! TGATAGTGTGTTTGTTTAGT+TGG + chr1_2:11547339-11547358 None:intergenic 30.0%
! GCTATAAATTTTCTTATGGG+TGG + chr1_2:11547403-11547422 None:intergenic 30.0%
GAAAATTTATAGCTAGTGAG+GGG - chr1_2:11547410-11547429 Msa0056070:intron 30.0%
! TGATACCATATTAGGTATTG+GGG + chr1_2:11547521-11547540 None:intergenic 30.0%
!!! AGCTAAATAGTGGTTTTAAG+TGG - chr1_2:11547641-11547660 Msa0056070:CDS 30.0%
!!! TAAATAGTGGTTTTAAGTGG+TGG - chr1_2:11547644-11547663 Msa0056070:CDS 30.0%
!!! AAATAGTGGTTTTAAGTGGT+GGG - chr1_2:11547645-11547664 Msa0056070:CDS 30.0%
!!! CTTAGAAGTTAGTTTTGCAA+GGG - chr1_2:11547677-11547696 Msa0056070:CDS 30.0%
!!! CAAATAGTTAGGTTTTGGAA+TGG + chr1_2:11547713-11547732 None:intergenic 30.0%
! CAGAACAAATAGTTAGGTTT+TGG + chr1_2:11547718-11547737 None:intergenic 30.0%
!! TGATCTGAGTTTACTTTTGT+AGG - chr1_2:11547812-11547831 Msa0056070:CDS 30.0%
!! AAGATCATTTTTCACAGAAG+TGG + chr1_2:11548004-11548023 None:intergenic 30.0%
TTCTGTGAAAAATGATCTTC+TGG - chr1_2:11548005-11548024 Msa0056070:CDS 30.0%
TGGAGTCTAAATGAAATGTA+GGG + chr1_2:11548035-11548054 None:intergenic 30.0%
TTGGAGTCTAAATGAAATGT+AGG + chr1_2:11548036-11548055 None:intergenic 30.0%
!! ATTATCTGAAGTGTTTTGCA+TGG - chr1_2:11548080-11548099 Msa0056070:CDS 30.0%
! AAATTCTGTTTTCATGGTGT+AGG - chr1_2:11548175-11548194 Msa0056070:CDS 30.0%
GGTGTAGGTTATTAAAACAA+AGG - chr1_2:11548190-11548209 Msa0056070:CDS 30.0%
ATCACCACATTTAATGTTTC+AGG + chr1_2:11548354-11548373 None:intergenic 30.0%
GAAACATTAAATGTGGTGAT+TGG - chr1_2:11548354-11548373 Msa0056070:intron 30.0%
GATCTAAATCTGCAACTAAA+TGG + chr1_2:11548415-11548434 None:intergenic 30.0%
ATAAGGGGAATAATGAAAGT+GGG - chr1_2:11548911-11548930 Msa0056070:intron 30.0%
ATTAAGAGGAAATGCCATAA+AGG + chr1_2:11549225-11549244 None:intergenic 30.0%
GCTATAAGCACATAATGAAA+AGG + chr1_2:11549556-11549575 None:intergenic 30.0%
TGTTAGCTGATAGCTTATAA+CGG + chr1_2:11549640-11549659 None:intergenic 30.0%
CTCTGTTTGGTAAAAAATAG+CGG + chr1_2:11549680-11549699 None:intergenic 30.0%
GAAGATAAGCATGAACATTT+AGG + chr1_2:11549703-11549722 None:intergenic 30.0%
TATAACTTCTCAAGTACAAC+TGG + chr1_2:11549725-11549744 None:intergenic 30.0%
ACTATGCATGTGATGAAAAT+AGG + chr1_2:11549775-11549794 None:intergenic 30.0%
!! GTTGGTAATGGAATTTATGT+GGG + chr1_2:11550010-11550029 None:intergenic 30.0%
!! AGTTGGTAATGGAATTTATG+TGG + chr1_2:11550011-11550030 None:intergenic 30.0%
ATATGTGTAATTCTTGTACG+CGG - chr1_2:11550247-11550266 Msa0056070:CDS 30.0%
TTTGTAGTTTAAATGTTGGC+TGG - chr1_2:11550470-11550489 Msa0056070:CDS 30.0%
TTTATGTGGTTAAAATGGTG+TGG - chr1_2:11550498-11550517 Msa0056070:CDS 30.0%
!! ATGCTTGTTGATTCTTGAAT+GGG - chr1_2:11550603-11550622 Msa0056070:CDS 30.0%
! TCACAAAATTCATTGGTTGT+TGG + chr1_2:11550656-11550675 None:intergenic 30.0%
GCACATACAATATTGCTAAA+TGG - chr1_2:11550710-11550729 Msa0056070:intron 30.0%
TTGCTAAATGGAGCTTATAT+TGG - chr1_2:11550722-11550741 Msa0056070:intron 30.0%
TAAATGGAGCTTATATTGGT+AGG - chr1_2:11550726-11550745 Msa0056070:intron 30.0%
!! TGGTAGGTTATTGTTACTTT+AGG - chr1_2:11550742-11550761 Msa0056070:CDS 30.0%
!! GGTAGGTTATTGTTACTTTA+GGG - chr1_2:11550743-11550762 Msa0056070:CDS 30.0%
CTTATAGATTTAGCAATCAG+GGG + chr1_2:11550791-11550810 None:intergenic 30.0%
CCTTATAGATTTAGCAATCA+GGG + chr1_2:11550792-11550811 None:intergenic 30.0%
TCTATAAGGCTCTTAAACAT+AGG - chr1_2:11550803-11550822 Msa0056070:exon 30.0%
ATTATATGATGACATGAAGC+TGG + chr1_2:11550843-11550862 None:intergenic 30.0%
ATAATAAAAGGGCAGATTGT+AGG - chr1_2:11550858-11550877 Msa0056070:intron 30.0%
TAATAAAAGGGCAGATTGTA+GGG - chr1_2:11550859-11550878 Msa0056070:intron 30.0%
!!! AATCTAACGGTTTTAGAATG+TGG + chr1_2:11550916-11550935 None:intergenic 30.0%
TGATAAACTGAAAATAGACG+TGG - chr1_2:11551114-11551133 Msa0056070:intron 30.0%
TGTTCATTTCTGTTCATAAG+AGG + chr1_2:11551441-11551460 None:intergenic 30.0%
AGATGATACCAATGAAAAAG+TGG + chr1_2:11551579-11551598 None:intergenic 30.0%
TTGAATGAGAAGAAATGGTT+TGG - chr1_2:11551637-11551656 Msa0056070:intron 30.0%
TCCAAAATTTGCCATTACTA+GGG + chr1_2:11551729-11551748 None:intergenic 30.0%
TTCCAAAATTTGCCATTACT+AGG + chr1_2:11551730-11551749 None:intergenic 30.0%
! TTTTGGCCATACATAAAATC+TGG + chr1_2:11551769-11551788 None:intergenic 30.0%
! AGTTTAGGCCCTATATTTTG+AGG - chr1_2:11542202-11542221 Msa0056070:intron 35.0%
!! GTTTAGGCCCTATATTTTGA+GGG - chr1_2:11542203-11542222 Msa0056070:intron 35.0%
!! TTTAGGCCCTATATTTTGAG+GGG - chr1_2:11542204-11542223 Msa0056070:intron 35.0%
TACATGACACTCAAAATCTC+AGG - chr1_2:11542355-11542374 Msa0056070:intron 35.0%
ACATGACACTCAAAATCTCA+GGG - chr1_2:11542356-11542375 Msa0056070:intron 35.0%
!! TTAGATTTGAGTAATGGGTG+TGG - chr1_2:11542495-11542514 Msa0056070:intron 35.0%
AAATAAAAGACCGAGACAAG+GGG - chr1_2:11542658-11542677 Msa0056070:intron 35.0%
!! CCTCAATATTTCTGAAGTTC+CGG + chr1_2:11542693-11542712 None:intergenic 35.0%
GGTTGTTGCTGAAAAATATC+TGG + chr1_2:11543134-11543153 None:intergenic 35.0%
!!! TGGAAATTTTGGAACGACTA+AGG + chr1_2:11543316-11543335 None:intergenic 35.0%
TAGTCGTTCCAAAATTTCCA+AGG - chr1_2:11543316-11543335 Msa0056070:intron 35.0%
! CGATAGTTCAAGATCTTTTC+CGG - chr1_2:11543345-11543364 Msa0056070:intron 35.0%
! GATAGTTCAAGATCTTTTCC+GGG - chr1_2:11543346-11543365 Msa0056070:intron 35.0%
! ATAGTTCAAGATCTTTTCCG+GGG - chr1_2:11543347-11543366 Msa0056070:intron 35.0%
GTGACAACGTAAGAAATCAT+TGG - chr1_2:11543383-11543402 Msa0056070:intron 35.0%
TACTTGAGTATGTAGTGAAG+AGG + chr1_2:11543651-11543670 None:intergenic 35.0%
AAGATAACACCTCTGTTTGT+TGG - chr1_2:11543734-11543753 Msa0056070:intron 35.0%
AGATAACACCTCTGTTTGTT+GGG - chr1_2:11543735-11543754 Msa0056070:intron 35.0%
! GATCAAAAGTTAAGAAGCAC+AGG - chr1_2:11543929-11543948 Msa0056070:intron 35.0%
! CTCATAGAAGTCTTCCATTT+TGG + chr1_2:11544214-11544233 None:intergenic 35.0%
AATGGAAGACTTCTATGAGT+TGG - chr1_2:11544215-11544234 Msa0056070:intron 35.0%
AGCTGAAAATTAAGCACATC+AGG + chr1_2:11544387-11544406 None:intergenic 35.0%
CAAACTTCGTACAATACCTT+TGG + chr1_2:11544429-11544448 None:intergenic 35.0%
!!! CTACATGCTTTTTCTTTCTC+TGG - chr1_2:11545002-11545021 Msa0056070:intron 35.0%
TCATTACATTGCACACATCA+AGG - chr1_2:11545264-11545283 Msa0056070:intron 35.0%
!! TGATGAGCTTGTTACTAACT+TGG - chr1_2:11545318-11545337 Msa0056070:intron 35.0%
!! GATGAGCTTGTTACTAACTT+GGG - chr1_2:11545319-11545338 Msa0056070:intron 35.0%
! CTTCTTCTGAAAATGGACAA+CGG + chr1_2:11545345-11545364 None:intergenic 35.0%
! CATGAAGCTTCTTCTGAAAA+TGG + chr1_2:11545352-11545371 None:intergenic 35.0%
AGTTTCACAATCTTTACCCA+TGG - chr1_2:11545465-11545484 Msa0056070:CDS 35.0%
CTAGATGAAAATGTCTCCAT+GGG + chr1_2:11545484-11545503 None:intergenic 35.0%
ACTAGATGAAAATGTCTCCA+TGG + chr1_2:11545485-11545504 None:intergenic 35.0%
CCCGTTCTCACTAAAAAATT+TGG + chr1_2:11545542-11545561 None:intergenic 35.0%
TCAATTCTACCTCTTTCCTA+TGG + chr1_2:11545705-11545724 None:intergenic 35.0%
TAAAGCATATGCACTAACCT+TGG + chr1_2:11545853-11545872 None:intergenic 35.0%
ACAAACTATTGATGTGCTCT+TGG + chr1_2:11545887-11545906 None:intergenic 35.0%
CATTCCTTGTATCATTTGCT+AGG - chr1_2:11545958-11545977 Msa0056070:intron 35.0%
! TTGTATCATTTGCTAGGGTA+GGG - chr1_2:11545964-11545983 Msa0056070:intron 35.0%
ACATCTATCCAATGTTCACA+CGG - chr1_2:11546047-11546066 Msa0056070:intron 35.0%
ATGGGATAAGTTACTGTCTA+AGG - chr1_2:11546121-11546140 Msa0056070:intron 35.0%
ACGAATATTCTTTGTAACGC+AGG + chr1_2:11546424-11546443 None:intergenic 35.0%
CATAAAATACAGTATGGTGG+AGG - chr1_2:11546693-11546712 Msa0056070:CDS 35.0%
ATCATTTAAGCAACTTGCAC+GGG - chr1_2:11546809-11546828 Msa0056070:intron 35.0%
CTTGATGGAAAAAACGTAGA+TGG - chr1_2:11546837-11546856 Msa0056070:intron 35.0%
! TCGTTTCTGTTTCTTCAGAA+AGG - chr1_2:11546909-11546928 Msa0056070:intron 35.0%
TATGTATGATCTGAGAGAGA+AGG - chr1_2:11547013-11547032 Msa0056070:intron 35.0%
AATACACATCGATGCTTAAC+AGG - chr1_2:11547105-11547124 Msa0056070:intron 35.0%
CTAGGAAAGAGCTAGAAAAT+TGG - chr1_2:11547154-11547173 Msa0056070:intron 35.0%
AGCTAGAAAATTGGATAGCA+TGG - chr1_2:11547163-11547182 Msa0056070:intron 35.0%
GCTAGAAAATTGGATAGCAT+GGG - chr1_2:11547164-11547183 Msa0056070:intron 35.0%
AAATAGAACCAGTTGACTGT+TGG + chr1_2:11547247-11547266 None:intergenic 35.0%
!! ACAGTCAACTGGTTCTATTT+CGG - chr1_2:11547247-11547266 Msa0056070:intron 35.0%
GCTTACATTGGATAGTGATA+TGG - chr1_2:11547432-11547451 Msa0056070:intron 35.0%
CATCTCTCATCTTACAAGTT+AGG - chr1_2:11547471-11547490 Msa0056070:intron 35.0%
ATCTTACAAGTTAGGCTTGT+GGG - chr1_2:11547479-11547498 Msa0056070:intron 35.0%
TCAACACACTTCTTACACTT+AGG + chr1_2:11547596-11547615 None:intergenic 35.0%
TAGTGACATGAGCTAAATAG+TGG - chr1_2:11547631-11547650 Msa0056070:CDS 35.0%
!! CAAAACTAACTTCTAAGGTG+AGG + chr1_2:11547674-11547693 None:intergenic 35.0%
CCTTGCAAAACTAACTTCTA+AGG + chr1_2:11547679-11547698 None:intergenic 35.0%
!!! CCTTAGAAGTTAGTTTTGCA+AGG - chr1_2:11547676-11547695 Msa0056070:CDS 35.0%
TTTGTATCATCTACTTCACC+AGG - chr1_2:11547750-11547769 Msa0056070:CDS 35.0%
AGTCATGAGAAGTTGTTCAA+TGG - chr1_2:11548222-11548241 Msa0056070:CDS 35.0%
GTCATGAGAAGTTGTTCAAT+GGG - chr1_2:11548223-11548242 Msa0056070:CDS 35.0%
ATATGTGCAATCTAGAGAGA+GGG + chr1_2:11548259-11548278 None:intergenic 35.0%
AATATGTGCAATCTAGAGAG+AGG + chr1_2:11548260-11548279 None:intergenic 35.0%
ATTTCTTAGTTCCTTCCTCT+TGG - chr1_2:11548277-11548296 Msa0056070:CDS 35.0%
!!! CATTTTGAAATCCAAGAGGA+AGG + chr1_2:11548291-11548310 None:intergenic 35.0%
CTTCCTCTTGGATTTCAAAA+TGG - chr1_2:11548289-11548308 Msa0056070:CDS 35.0%
!!! TCTCCATTTTGAAATCCAAG+AGG + chr1_2:11548295-11548314 None:intergenic 35.0%
CACACCTGAAACATTAAATG+TGG - chr1_2:11548347-11548366 Msa0056070:intron 35.0%
AACCTGTAGCAATTTCAGAA+TGG - chr1_2:11548504-11548523 Msa0056070:intron 35.0%
!! ATCCATTCTGAAATTGCTAC+AGG + chr1_2:11548509-11548528 None:intergenic 35.0%
CCAATCATTCTCAGATATGA+TGG + chr1_2:11548752-11548771 None:intergenic 35.0%
CCATCATATCTGAGAATGAT+TGG - chr1_2:11548749-11548768 Msa0056070:intron 35.0%
! GAAATGTTTCTGCGAAGAAT+GGG - chr1_2:11548771-11548790 Msa0056070:intron 35.0%
! AAATGTTTCTGCGAAGAATG+GGG - chr1_2:11548772-11548791 Msa0056070:intron 35.0%
AATCTTTGCAGATACTCCTT+GGG + chr1_2:11548809-11548828 None:intergenic 35.0%
GATAAGGGGAATAATGAAAG+TGG - chr1_2:11548910-11548929 Msa0056070:intron 35.0%
!!! GTAGAGTTTTAGATTACCTC+AGG + chr1_2:11548964-11548983 None:intergenic 35.0%
AAACTCTACCAACATTCTGT+TGG - chr1_2:11548975-11548994 Msa0056070:intron 35.0%
TAGCATATCCAACAGAATGT+TGG + chr1_2:11548986-11549005 None:intergenic 35.0%
GCACAAGAAAATCAAGATCA+GGG + chr1_2:11549016-11549035 None:intergenic 35.0%
GACTTGGCTTCAAAAAACTT+AGG + chr1_2:11549038-11549057 None:intergenic 35.0%
! TATGAAGTTTAGGGTCTGTT+TGG - chr1_2:11549129-11549148 Msa0056070:CDS 35.0%
! AGATTATGGCTTATAACGGA+TGG - chr1_2:11549293-11549312 Msa0056070:intron 35.0%
!! GATTATGGCTTATAACGGAT+GGG - chr1_2:11549294-11549313 Msa0056070:intron 35.0%
CTGATGTGCTAAATAGAGAT+AGG - chr1_2:11549362-11549381 Msa0056070:intron 35.0%
TAGGTTATAACTTCCGAAAC+TGG - chr1_2:11549381-11549400 Msa0056070:intron 35.0%
GAAAAGGTTGTTACCAAACA+GGG + chr1_2:11549540-11549559 None:intergenic 35.0%
TGAAAAGGTTGTTACCAAAC+AGG + chr1_2:11549541-11549560 None:intergenic 35.0%
ATGAACATTTAGGCTCTGTT+TGG + chr1_2:11549693-11549712 None:intergenic 35.0%
TGTCTTAAAAAAGCTGCTTC+CGG - chr1_2:11549856-11549875 Msa0056070:intron 35.0%
ATTTATGTGGGTGAACAGAA+GGG + chr1_2:11549998-11550017 None:intergenic 35.0%
AATTTATGTGGGTGAACAGA+AGG + chr1_2:11549999-11550018 None:intergenic 35.0%
TGAAAGTTGCATTGGAGAAA+AGG - chr1_2:11550180-11550199 Msa0056070:CDS 35.0%
!! GATTTGTTGAAACAGATCGA+CGG - chr1_2:11550308-11550327 Msa0056070:CDS 35.0%
! ATTTGTTGAAACAGATCGAC+GGG - chr1_2:11550309-11550328 Msa0056070:CDS 35.0%
GCTCCAGGAAGATTAAAAAT+GGG - chr1_2:11550341-11550360 Msa0056070:CDS 35.0%
!! ACTCCCATTTTTAATCTTCC+TGG + chr1_2:11550347-11550366 None:intergenic 35.0%
ACCAGCTGAAAATGATGATA+TGG - chr1_2:11550404-11550423 Msa0056070:CDS 35.0%
CCAGCTGAAAATGATGATAT+GGG - chr1_2:11550405-11550424 Msa0056070:CDS 35.0%
ATGATGATATGGGAATCCTT+TGG - chr1_2:11550415-11550434 Msa0056070:CDS 35.0%
TGATGATATGGGAATCCTTT+GGG - chr1_2:11550416-11550435 Msa0056070:CDS 35.0%
CAAATTGCAACACATCATCT+TGG + chr1_2:11550582-11550601 None:intergenic 35.0%
!! CATGCTTGTTGATTCTTGAA+TGG - chr1_2:11550602-11550621 Msa0056070:CDS 35.0%
TTGATTCTTGAATGGGAGAA+TGG - chr1_2:11550610-11550629 Msa0056070:CDS 35.0%
TGGATTGTATAAAGCAGTAG+AGG + chr1_2:11550636-11550655 None:intergenic 35.0%
CCCTGATTGCTAAATCTATA+AGG - chr1_2:11550789-11550808 Msa0056070:CDS 35.0%
GCCTTATAGATTTAGCAATC+AGG + chr1_2:11550793-11550812 None:intergenic 35.0%
ACAGAGACTACGTATAAAAG+TGG + chr1_2:11550889-11550908 None:intergenic 35.0%
! CTTTTATACGTAGTCTCTGT+TGG - chr1_2:11550889-11550908 Msa0056070:intron 35.0%
ATGCAATCACACAATACAGA+GGG + chr1_2:11551033-11551052 None:intergenic 35.0%
TGTCTACTACAAGTCAGTTT+AGG + chr1_2:11551078-11551097 None:intergenic 35.0%
TGTCATTGCTGCAATCAATT+CGG - chr1_2:11551181-11551200 Msa0056070:intron 35.0%
TGACGAAAATACTACACTTG+TGG - chr1_2:11551302-11551321 Msa0056070:intron 35.0%
TGGAGATCAGATTATTGTGA+GGG - chr1_2:11551341-11551360 Msa0056070:intron 35.0%
! CAGCAATATCTCGATTTTCA+TGG + chr1_2:11551377-11551396 None:intergenic 35.0%
CATGAAAATCGAGATATTGC+TGG - chr1_2:11551375-11551394 Msa0056070:intron 35.0%
GACTTCAAATGTTTCATCTC+AGG - chr1_2:11551542-11551561 Msa0056070:intron 35.0%
!!! TGTAGGAACCACTTTTTCAT+TGG - chr1_2:11551568-11551587 Msa0056070:intron 35.0%
! AATGAGAAGAAATGGTTTGG+TGG - chr1_2:11551640-11551659 Msa0056070:intron 35.0%
!! ATACCTAGTGTTGGATGTTT+TGG - chr1_2:11551695-11551714 Msa0056070:intron 35.0%
TGTATGGCCAAAATTTCAAG+TGG - chr1_2:11551776-11551795 Msa0056070:five_prime_UTR 35.0%
GACGAACGAATGAATGAGTT+TGG + chr1_2:11541650-11541669 None:intergenic 40.0%
! TCGTCTTCTATCAGAAGTGT+CGG + chr1_2:11542150-11542169 None:intergenic 40.0%
! TGTTGGCATTGAGCAAGTTT+AGG - chr1_2:11542187-11542206 Msa0056070:intron 40.0%
TTCGTGCCCCTCAAAATATA+GGG + chr1_2:11542213-11542232 None:intergenic 40.0%
!! TTGAGTAATGGGTGTGGAAA+TGG - chr1_2:11542501-11542520 Msa0056070:intron 40.0%
TATAATACAAGACTCAGCCC+TGG + chr1_2:11542610-11542629 None:intergenic 40.0%
CCGGAACTTCAGAAATATTG+AGG - chr1_2:11542690-11542709 Msa0056070:intron 40.0%
ATTACAAAGCCAGTCTGTTC+AGG - chr1_2:11542849-11542868 Msa0056070:intron 40.0%
ACCAATGCACAGAAGCAATT+CGG + chr1_2:11542900-11542919 None:intergenic 40.0%
ATTCACGAAGTTCCGTGTTT+GGG + chr1_2:11542998-11543017 None:intergenic 40.0%
! ACAACCGGTGTTAGATCAAT+TGG - chr1_2:11543148-11543167 Msa0056070:CDS 40.0%
! CGTTCTTGCCTTGGAAATTT+TGG + chr1_2:11543327-11543346 None:intergenic 40.0%
TTGAACTATCGTTCTTGCCT+TGG + chr1_2:11543336-11543355 None:intergenic 40.0%
! AAGCCTTATCACACTAAGTG+GGG + chr1_2:11543566-11543585 None:intergenic 40.0%
! CAAGCCTTATCACACTAAGT+GGG + chr1_2:11543567-11543586 None:intergenic 40.0%
GTAGTGAAGAGGCAGTAAAA+GGG + chr1_2:11543640-11543659 None:intergenic 40.0%
TGTAGTGAAGAGGCAGTAAA+AGG + chr1_2:11543641-11543660 None:intergenic 40.0%
GTCGTTTGCATCATCTTTGA+GGG - chr1_2:11543845-11543864 Msa0056070:intron 40.0%
ATGAGTCTGAACAACCAGTA+AGG + chr1_2:11543897-11543916 None:intergenic 40.0%
ACGTAGTGGCTCAACAATAT+TGG - chr1_2:11543974-11543993 Msa0056070:intron 40.0%
AAGGGACACTACAAGATAGA+TGG + chr1_2:11544006-11544025 None:intergenic 40.0%
GTTGGACATGGAAAACATGT+CGG + chr1_2:11544053-11544072 None:intergenic 40.0%
! TGTTTTCCATGTCCAACACA+CGG - chr1_2:11544056-11544075 Msa0056070:intron 40.0%
! TCATTGGTCAGAATTGACTC+TGG - chr1_2:11544102-11544121 Msa0056070:intron 40.0%
GAGCACCTTCATAGTAAAGT+GGG + chr1_2:11544162-11544181 None:intergenic 40.0%
TGAGCACCTTCATAGTAAAG+TGG + chr1_2:11544163-11544182 None:intergenic 40.0%
!! CTCTGAAGCTTCTTCCAAAA+TGG - chr1_2:11544197-11544216 Msa0056070:intron 40.0%
! TGAGTTGGAGTTGAATGTCA+AGG - chr1_2:11544230-11544249 Msa0056070:intron 40.0%
GAGTTGGAGTTGAATGTCAA+GGG - chr1_2:11544231-11544250 Msa0056070:intron 40.0%
CATTAAGCTCTTCAACAGTG+AGG + chr1_2:11544290-11544309 None:intergenic 40.0%
CTCACTGTTGAAGAGCTTAA+TGG - chr1_2:11544288-11544307 Msa0056070:intron 40.0%
CTTCGTACAATACCTTTGGA+AGG + chr1_2:11544425-11544444 None:intergenic 40.0%
!! ACTGACAGTTTTCAGGACTA+CGG + chr1_2:11544647-11544666 None:intergenic 40.0%
TGAACAGTGATACACACACT+GGG + chr1_2:11544731-11544750 None:intergenic 40.0%
TTGAACAGTGATACACACAC+TGG + chr1_2:11544732-11544751 None:intergenic 40.0%
CACGTGTGAAACACAAATCA+AGG + chr1_2:11544803-11544822 None:intergenic 40.0%
!! CTTGATTTGTGTTTCACACG+TGG - chr1_2:11544801-11544820 Msa0056070:intron 40.0%
TCAGCTGTTCTGATACACAA+GGG - chr1_2:11545223-11545242 Msa0056070:CDS 40.0%
ACATCAAGGATGTGAACACA+GGG - chr1_2:11545278-11545297 Msa0056070:intron 40.0%
CTGGCAAGTATCAAGATATG+AGG + chr1_2:11545674-11545693 None:intergenic 40.0%
AATTGAGTCGTATCAGTGAG+AGG - chr1_2:11545719-11545738 Msa0056070:intron 40.0%
CTACCCTAGCAAATGATACA+AGG + chr1_2:11545965-11545984 None:intergenic 40.0%
! CTTGTATCATTTGCTAGGGT+AGG - chr1_2:11545963-11545982 Msa0056070:intron 40.0%
! GGAGCACCAAGATCAAAAAA+TGG + chr1_2:11546171-11546190 None:intergenic 40.0%
ATTCTTTGTAACGCAGGCAT+CGG + chr1_2:11546418-11546437 None:intergenic 40.0%
CAGGGTAACAGTTTGGATAT+TGG + chr1_2:11546449-11546468 None:intergenic 40.0%
ATATCCAAACTGTTACCCTG+TGG - chr1_2:11546449-11546468 Msa0056070:intron 40.0%
TATCCAAACTGTTACCCTGT+GGG - chr1_2:11546450-11546469 Msa0056070:intron 40.0%
GCATAAAGTTATTGCCCACA+GGG + chr1_2:11546467-11546486 None:intergenic 40.0%
AGCATAAAGTTATTGCCCAC+AGG + chr1_2:11546468-11546487 None:intergenic 40.0%
TGTTTGGACTGTCTGATTGA+TGG - chr1_2:11546741-11546760 Msa0056070:intron 40.0%
GTTTGGACTGTCTGATTGAT+GGG - chr1_2:11546742-11546761 Msa0056070:intron 40.0%
TTTGGACTGTCTGATTGATG+GGG - chr1_2:11546743-11546762 Msa0056070:intron 40.0%
AGTACTACGTGTCTAGATCA+TGG - chr1_2:11546862-11546881 Msa0056070:intron 40.0%
CATCTTACAAGTTAGGCTTG+TGG - chr1_2:11547478-11547497 Msa0056070:intron 40.0%
TCTTACAAGTTAGGCTTGTG+GGG - chr1_2:11547480-11547499 Msa0056070:intron 40.0%
!! CCATATTAGGTATTGGGGTT+AGG + chr1_2:11547516-11547535 None:intergenic 40.0%
CCTAACCCCAATACCTAATA+TGG - chr1_2:11547513-11547532 Msa0056070:intron 40.0%
! TGGCCCAATAGATTTAGGAT+AGG + chr1_2:11547547-11547566 None:intergenic 40.0%
CTAAATCTATTGGGCCACTT+GGG - chr1_2:11547550-11547569 Msa0056070:intron 40.0%
CACACTTCTTACACTTAGGA+AGG + chr1_2:11547592-11547611 None:intergenic 40.0%
ATCTACTTCACCAGGTTGTT+AGG - chr1_2:11547758-11547777 Msa0056070:CDS 40.0%
TCTACTTCACCAGGTTGTTA+GGG - chr1_2:11547759-11547778 Msa0056070:CDS 40.0%
TTTGAACAACCCTAACAACC+TGG + chr1_2:11547771-11547790 None:intergenic 40.0%
TAAGAAGAGCCAAAAACCCT+CGG + chr1_2:11547971-11547990 None:intergenic 40.0%
!! ATCTGAAGTGTTTTGCATGG+AGG - chr1_2:11548083-11548102 Msa0056070:CDS 40.0%
TATGTGCAATCTAGAGAGAG+GGG + chr1_2:11548258-11548277 None:intergenic 40.0%
TGTCAGAATTCTTCACAGCT+GGG + chr1_2:11548329-11548348 None:intergenic 40.0%
!! ACGTGGTGCTATATTTCCAA+GGG - chr1_2:11548594-11548613 Msa0056070:intron 40.0%
AAGGGAGTCTTCTGTAAGTT+GGG - chr1_2:11548612-11548631 Msa0056070:intron 40.0%
CTTACTTCTGTCCTACTTTG+TGG - chr1_2:11548706-11548725 Msa0056070:intron 40.0%
TGTCCTACTTTGTGGATACT+AGG - chr1_2:11548714-11548733 Msa0056070:intron 40.0%
! GGAAATGTTTCTGCGAAGAA+TGG - chr1_2:11548770-11548789 Msa0056070:intron 40.0%
CAATCTTTGCAGATACTCCT+TGG + chr1_2:11548810-11548829 None:intergenic 40.0%
ATCTGGATCTTGTGAAGAGA+TGG - chr1_2:11548858-11548877 Msa0056070:intron 40.0%
TGAAGAGATGGCAATATGTG+AGG - chr1_2:11548870-11548889 Msa0056070:intron 40.0%
ATTATTCCCCTTATCCCAGT+TGG + chr1_2:11548905-11548924 None:intergenic 40.0%
GGGAATAATGAAAGTGGGAA+TGG - chr1_2:11548916-11548935 Msa0056070:intron 40.0%
GGCACAAGAAAATCAAGATC+AGG + chr1_2:11549017-11549036 None:intergenic 40.0%
TATGAAGCTAAGGGTCTGTT+TGG - chr1_2:11549248-11549267 Msa0056070:CDS 40.0%
GTTATAACTTCCGAAACTGG+TGG - chr1_2:11549384-11549403 Msa0056070:intron 40.0%
! CGCTTTTATTCCACCAGTTT+CGG + chr1_2:11549397-11549416 None:intergenic 40.0%
CGAAACTGGTGGAATAAAAG+CGG - chr1_2:11549395-11549414 Msa0056070:intron 40.0%
ACGACAAAAAAAGCCCTGTT+TGG - chr1_2:11549524-11549543 Msa0056070:intron 40.0%
GTCTTAAAAAAGCTGCTTCC+GGG - chr1_2:11549857-11549876 Msa0056070:intron 40.0%
AAGTTACATATGCACACACC+CGG + chr1_2:11549878-11549897 None:intergenic 40.0%
CAAACCTGCATGTGTTAGAA+GGG + chr1_2:11550160-11550179 None:intergenic 40.0%
ACAAACCTGCATGTGTTAGA+AGG + chr1_2:11550161-11550180 None:intergenic 40.0%
CAGGTTTGTGAAAGTTGCAT+TGG - chr1_2:11550172-11550191 Msa0056070:CDS 40.0%
TGTAATTCTTGTACGCGGAA+AGG - chr1_2:11550252-11550271 Msa0056070:CDS 40.0%
AAGCCTCCAAGATTGATCTA+GGG + chr1_2:11550282-11550301 None:intergenic 40.0%
ATCAATCTTGGAGGCTTCAA+AGG - chr1_2:11550285-11550304 Msa0056070:CDS 40.0%
TCAATCTTGGAGGCTTCAAA+GGG - chr1_2:11550286-11550305 Msa0056070:CDS 40.0%
CGCTCCAGGAAGATTAAAAA+TGG - chr1_2:11550340-11550359 Msa0056070:CDS 40.0%
! CCCATATCATCATTTTCAGC+TGG + chr1_2:11550408-11550427 None:intergenic 40.0%
GATGATATGGGAATCCTTTG+GGG - chr1_2:11550417-11550436 Msa0056070:CDS 40.0%
CATGCAATCACACAATACAG+AGG + chr1_2:11551034-11551053 None:intergenic 40.0%
GCAATGACAAACTAGTACGT+GGG + chr1_2:11551170-11551189 None:intergenic 40.0%
AGCAATGACAAACTAGTACG+TGG + chr1_2:11551171-11551190 None:intergenic 40.0%
TCCATATCTGGTAATTGCTC+AGG - chr1_2:11551227-11551246 Msa0056070:intron 40.0%
ACCTGAGCAATTACCAGATA+TGG + chr1_2:11551231-11551250 None:intergenic 40.0%
GTGGACGTTAACATATTTGC+TGG - chr1_2:11551321-11551340 Msa0056070:intron 40.0%
CTGGAGATCAGATTATTGTG+AGG - chr1_2:11551340-11551359 Msa0056070:intron 40.0%
TGAGCTGTGTAACGAGAAAA+AGG - chr1_2:11551479-11551498 Msa0056070:intron 40.0%
! TGTTTCATCTCAGGTTGTGT+AGG - chr1_2:11551551-11551570 Msa0056070:intron 40.0%
AGACCAAAACATCCAACACT+AGG + chr1_2:11551701-11551720 None:intergenic 40.0%
! GCCCTAGTAATGGCAAATTT+TGG - chr1_2:11551725-11551744 Msa0056070:intron 40.0%
TCGTCTTTCCATCTTCTCTC+TGG - chr1_2:11541695-11541714 Msa0056070:three_prime_UTR 45.0%
CGACATTACCAGAGAGAAGA+TGG + chr1_2:11541706-11541725 None:intergenic 45.0%
CTTCGTGCCCCTCAAAATAT+AGG + chr1_2:11542214-11542233 None:intergenic 45.0%
! TTGTTGGACTCTGCTTGTTG+AGG - chr1_2:11542234-11542253 Msa0056070:intron 45.0%
GACACTCAAAATCTCAGGGA+TGG - chr1_2:11542360-11542379 Msa0056070:intron 45.0%
GTATCATCATCCCCTTGTCT+CGG + chr1_2:11542671-11542690 None:intergenic 45.0%
AGACAAGGGGATGATGATAC+CGG - chr1_2:11542671-11542690 Msa0056070:intron 45.0%
TCCGAATTGCTTCTGTGCAT+TGG - chr1_2:11542896-11542915 Msa0056070:intron 45.0%
!! TCTTGGCTTTGACCCAAACA+CGG - chr1_2:11542983-11543002 Msa0056070:intron 45.0%
GATTCACGAAGTTCCGTGTT+TGG + chr1_2:11542999-11543018 None:intergenic 45.0%
TCCAAGATTTGTGAGTCCTG+CGG + chr1_2:11543033-11543052 None:intergenic 45.0%
CGAGCCAATTGATCTAACAC+CGG + chr1_2:11543155-11543174 None:intergenic 45.0%
! CGGTGTTAGATCAATTGGCT+CGG - chr1_2:11543153-11543172 Msa0056070:CDS 45.0%
GAAGCAATGTCAGGAACTCA+TGG + chr1_2:11543274-11543293 None:intergenic 45.0%
GCAATGACAGAAGCAATGTC+AGG + chr1_2:11543283-11543302 None:intergenic 45.0%
AATCTCTGTCTTTGTGGGGA+TGG - chr1_2:11543461-11543480 Msa0056070:intron 45.0%
ATCTCTGTCTTTGTGGGGAT+GGG - chr1_2:11543462-11543481 Msa0056070:intron 45.0%
CTTATCACACTAAGTGGGGT+TGG + chr1_2:11543562-11543581 None:intergenic 45.0%
CAACCCCACTTAGTGTGATA+AGG - chr1_2:11543560-11543579 Msa0056070:intron 45.0%
! CCAAGCCTTATCACACTAAG+TGG + chr1_2:11543568-11543587 None:intergenic 45.0%
CCACTTAGTGTGATAAGGCT+TGG - chr1_2:11543565-11543584 Msa0056070:intron 45.0%
GGTCGTTTGCATCATCTTTG+AGG - chr1_2:11543844-11543863 Msa0056070:intron 45.0%
! TTTGCATCATCTTTGAGGGC+TGG - chr1_2:11543849-11543868 Msa0056070:intron 45.0%
GAAAACATGTCGGACACTTC+GGG + chr1_2:11544043-11544062 None:intergenic 45.0%
GGAAAACATGTCGGACACTT+CGG + chr1_2:11544044-11544063 None:intergenic 45.0%
TTCAAGAAAAGGCCGTGTGT+TGG + chr1_2:11544071-11544090 None:intergenic 45.0%
!! CTATGAAGGTGCTCACAATG+TGG - chr1_2:11544168-11544187 Msa0056070:intron 45.0%
TACGGTACACATCCACAAAG+AGG + chr1_2:11544629-11544648 None:intergenic 45.0%
!! TCTTTGTTGTTGTCTGCCAG+AGG + chr1_2:11545111-11545130 None:intergenic 45.0%
AGTTCAGCGGGGAATGAAAA+TGG + chr1_2:11545148-11545167 None:intergenic 45.0%
TGGTGCATACTAAGTTCAGC+GGG + chr1_2:11545160-11545179 None:intergenic 45.0%
GTGGTGCATACTAAGTTCAG+CGG + chr1_2:11545161-11545180 None:intergenic 45.0%
GTCAGCTGTTCTGATACACA+AGG - chr1_2:11545222-11545241 Msa0056070:CDS 45.0%
AAGGGAACTGCAGCTAATAG+TGG - chr1_2:11545241-11545260 Msa0056070:intron 45.0%
CACATCAAGGATGTGAACAC+AGG - chr1_2:11545277-11545296 Msa0056070:intron 45.0%
! GTAGCTGACAGTAATGGAAG+TGG - chr1_2:11545430-11545449 Msa0056070:CDS 45.0%
! TTTTAGTGAGAACGGGGGAA+TGG - chr1_2:11545546-11545565 Msa0056070:CDS 45.0%
CTTTCCTATGGTTGTACTGC+TGG + chr1_2:11545693-11545712 None:intergenic 45.0%
GCAGTACAACCATAGGAAAG+AGG - chr1_2:11545693-11545712 Msa0056070:intron 45.0%
TGAAGCTCCTGTTAAACCAC+TGG - chr1_2:11545768-11545787 Msa0056070:intron 45.0%
CAAAAATACGGTTGCTCCAG+TGG + chr1_2:11545787-11545806 None:intergenic 45.0%
! CACTGGAGCAACCGTATTTT+TGG - chr1_2:11545785-11545804 Msa0056070:intron 45.0%
!! ATAGTGACTGGCTTCGTCAA+TGG - chr1_2:11545812-11545831 Msa0056070:intron 45.0%
!! TAGTGACTGGCTTCGTCAAT+GGG - chr1_2:11545813-11545832 Msa0056070:intron 45.0%
GGGCTGAAAATGTTACTCCA+AGG - chr1_2:11545833-11545852 Msa0056070:intron 45.0%
! TCTTTCCTTGCCTTAGCTTG+AGG - chr1_2:11545933-11545952 Msa0056070:intron 45.0%
AAGGAATGTGCCTCAAGCTA+AGG + chr1_2:11545946-11545965 None:intergenic 45.0%
GGACTTTACCGTGTGAACAT+TGG + chr1_2:11546058-11546077 None:intergenic 45.0%
TCGAGGTAACCTTTGACACT+GGG + chr1_2:11546079-11546098 None:intergenic 45.0%
!! AGCGACTGTCTTCTAAAGCA+TGG - chr1_2:11546102-11546121 Msa0056070:intron 45.0%
!! GCGACTGTCTTCTAAAGCAT+GGG - chr1_2:11546103-11546122 Msa0056070:intron 45.0%
!! ATTGGTAATGGGGCTTGAGA+AGG - chr1_2:11546233-11546252 Msa0056070:intron 45.0%
!! TTGGTAATGGGGCTTGAGAA+GGG - chr1_2:11546234-11546253 Msa0056070:intron 45.0%
! GAGCATTGTGAGATGGCAAA+GGG - chr1_2:11546356-11546375 Msa0056070:intron 45.0%
ATTGTGAGATGGCAAAGGGT+AGG - chr1_2:11546360-11546379 Msa0056070:intron 45.0%
TTGTGAGATGGCAAAGGGTA+GGG - chr1_2:11546361-11546380 Msa0056070:intron 45.0%
TTCTTTGTAACGCAGGCATC+GGG + chr1_2:11546417-11546436 None:intergenic 45.0%
! TTTGGGTTTGTGCTGATGTG+AGG - chr1_2:11546498-11546517 Msa0056070:CDS 45.0%
TCGTGTCAGCAGACACTTAT+CGG - chr1_2:11546775-11546794 Msa0056070:intron 45.0%
CTTGCACGGGATATTCTTGA+TGG - chr1_2:11546822-11546841 Msa0056070:intron 45.0%
ACTGTGTTCCAACAGTCAAC+TGG - chr1_2:11547236-11547255 Msa0056070:intron 45.0%
CATTGGATAGTGATATGGCC+TGG - chr1_2:11547437-11547456 Msa0056070:intron 45.0%
TAGTGATATGGCCTGGATAG+TGG - chr1_2:11547444-11547463 Msa0056070:intron 45.0%
AGAGATGACAACCACTATCC+AGG + chr1_2:11547458-11547477 None:intergenic 45.0%
CCAAGTGGCCCAATAGATTT+AGG + chr1_2:11547552-11547571 None:intergenic 45.0%
CCTAAATCTATTGGGCCACT+TGG - chr1_2:11547549-11547568 Msa0056070:intron 45.0%
!! TACACTTAGGAAGGAGCATC+TGG + chr1_2:11547583-11547602 None:intergenic 45.0%
GTGTGTTGAGAGTCTGACAT+TGG - chr1_2:11547607-11547626 Msa0056070:CDS 45.0%
! ACTTTTGTAGGTTGCAGCAG+TGG - chr1_2:11547824-11547843 Msa0056070:CDS 45.0%
ATCAGCTTCAGATGGAGCAT+CGG + chr1_2:11547866-11547885 None:intergenic 45.0%
GGACAACTAATAGCTGCTGT+TGG + chr1_2:11547895-11547914 None:intergenic 45.0%
GCAGCTATTAGTTGTCCACA+TGG - chr1_2:11547898-11547917 Msa0056070:CDS 45.0%
TCAGGCATAAGTTGTCCATG+TGG + chr1_2:11547916-11547935 None:intergenic 45.0%
AAGAAGAGCCAAAAACCCTC+GGG + chr1_2:11547970-11547989 None:intergenic 45.0%
! ACTGCATTCAGAGCACTCTT+TGG + chr1_2:11548055-11548074 None:intergenic 45.0%
TTTGCATGGAGGACTCTATG+AGG - chr1_2:11548094-11548113 Msa0056070:CDS 45.0%
GTGTCAGAATTCTTCACAGC+TGG + chr1_2:11548330-11548349 None:intergenic 45.0%
!! TCGTGAGTGCTGAGAAACAA+GGG + chr1_2:11548542-11548561 None:intergenic 45.0%
AGCACTCACGACTCATTGAA+AGG - chr1_2:11548551-11548570 Msa0056070:intron 45.0%
!! GACGTGGTGCTATATTTCCA+AGG - chr1_2:11548593-11548612 Msa0056070:intron 45.0%
CAACTTACAGAAGACTCCCT+TGG + chr1_2:11548613-11548632 None:intergenic 45.0%
CAAGGGAGTCTTCTGTAAGT+TGG - chr1_2:11548611-11548630 Msa0056070:intron 45.0%
AGGGAGTCTTCTGTAAGTTG+GGG - chr1_2:11548613-11548632 Msa0056070:intron 45.0%
CTGCCTAGTATCCACAAAGT+AGG + chr1_2:11548720-11548739 None:intergenic 45.0%
CTACTTTGTGGATACTAGGC+AGG - chr1_2:11548718-11548737 Msa0056070:intron 45.0%
!! GATTCGGTGAATGCTACATC+TGG - chr1_2:11548841-11548860 Msa0056070:intron 45.0%
TTCGATCAAGACTTGTCCTG+AGG - chr1_2:11548945-11548964 Msa0056070:intron 45.0%
AACTGGTGGAATAAAAGCGG+TGG - chr1_2:11549398-11549417 Msa0056070:intron 45.0%
GGGTGTGTGCATATGTAACT+TGG - chr1_2:11549877-11549896 Msa0056070:intron 45.0%
TTTGCCCTTCTAACACATGC+AGG - chr1_2:11550153-11550172 Msa0056070:CDS 45.0%
AATTCTTGTACGCGGAAAGG+AGG - chr1_2:11550255-11550274 Msa0056070:CDS 45.0%
GAAGCCTCCAAGATTGATCT+AGG + chr1_2:11550283-11550302 None:intergenic 45.0%
ACAAACTTGGCTTACCCCAA+AGG + chr1_2:11550434-11550453 None:intergenic 45.0%
! GTTGGCTGGCTAACTTTATG+TGG - chr1_2:11550484-11550503 Msa0056070:CDS 45.0%
GCAATCAGGGGCTTAAAGAT+GGG + chr1_2:11550779-11550798 None:intergenic 45.0%
AGCAATCAGGGGCTTAAAGA+TGG + chr1_2:11550780-11550799 None:intergenic 45.0%
TAAAAGGGCAGATTGTAGGG+TGG - chr1_2:11550862-11550881 Msa0056070:intron 45.0%
GGAGAGAGAGCAATCCAATA+TGG + chr1_2:11550971-11550990 None:intergenic 45.0%
CAATCACACAATACAGAGGG+AGG + chr1_2:11551030-11551049 None:intergenic 45.0%
ACCATGTAAATCCTTGTGCC+TGG - chr1_2:11551669-11551688 Msa0056070:intron 45.0%
CCATGTAAATCCTTGTGCCT+GGG - chr1_2:11551670-11551689 Msa0056070:intron 45.0%
CATGTAAATCCTTGTGCCTG+GGG - chr1_2:11551671-11551690 Msa0056070:intron 45.0%
!! TGGTCTTGTTGCCCTAGTAA+TGG - chr1_2:11551715-11551734 Msa0056070:intron 45.0%
GTCCTGTGTTCGACACTTGT+TGG - chr1_2:11542170-11542189 Msa0056070:CDS 50.0%
!! TGCCAACAAGTGTCGAACAC+AGG + chr1_2:11542175-11542194 None:intergenic 50.0%
! TTTGAGGGGCACGAAGTTGT+TGG - chr1_2:11542218-11542237 Msa0056070:intron 50.0%
AAGCACGATCTCACAATCGC+AGG + chr1_2:11542301-11542320 None:intergenic 50.0%
CAATGAGCAGATCAACGGCT+CGG - chr1_2:11542630-11542649 Msa0056070:intron 50.0%
AATGAGCAGATCAACGGCTC+GGG - chr1_2:11542631-11542650 Msa0056070:intron 50.0%
ACACGACAACCTGAACAGAC+TGG + chr1_2:11542861-11542880 None:intergenic 50.0%
GAATCTGCTAATTCACCCGC+AGG - chr1_2:11543014-11543033 Msa0056070:CDS 50.0%
CCAAGATTTGTGAGTCCTGC+GGG + chr1_2:11543032-11543051 None:intergenic 50.0%
TCACATGAGACACACTTCCC+CGG + chr1_2:11543367-11543386 None:intergenic 50.0%
TCTCTGTCTTTGTGGGGATG+GGG - chr1_2:11543463-11543482 Msa0056070:intron 50.0%
! ACTAAGTGGGGTTGGCAACA+TGG + chr1_2:11543554-11543573 None:intergenic 50.0%
!! AAGAAGCACAGGCACTGACA+TGG - chr1_2:11543940-11543959 Msa0056070:intron 50.0%
! CGGGTTAGACACAGCACAAA+GGG + chr1_2:11544024-11544043 None:intergenic 50.0%
! TCGGGTTAGACACAGCACAA+AGG + chr1_2:11544025-11544044 None:intergenic 50.0%
AAAAGGCCGTGTGTTGGACA+TGG + chr1_2:11544065-11544084 None:intergenic 50.0%
GCGCTATGTCTTCCTTCCAA+AGG - chr1_2:11544410-11544429 Msa0056070:intron 50.0%
CTCATGTGATCGCTACAAGC+AGG + chr1_2:11544953-11544972 None:intergenic 50.0%
GGTGCATACTAAGTTCAGCG+GGG + chr1_2:11545159-11545178 None:intergenic 50.0%
GAGATGGCTCAGACAATCTG+TGG + chr1_2:11545180-11545199 None:intergenic 50.0%
AGGATGTGAACACAGGGCAA+TGG - chr1_2:11545284-11545303 Msa0056070:intron 50.0%
ATGTGAACACAGGGCAATGG+TGG - chr1_2:11545287-11545306 Msa0056070:intron 50.0%
TGTGAACACAGGGCAATGGT+GGG - chr1_2:11545288-11545307 Msa0056070:intron 50.0%
GCAAGGGTAGCTGACAGTAA+TGG - chr1_2:11545424-11545443 Msa0056070:CDS 50.0%
CTTGCCAGCAGTACAACCAT+AGG - chr1_2:11545686-11545705 Msa0056070:intron 50.0%
GGTTGCTCCAGTGGTTTAAC+AGG + chr1_2:11545778-11545797 None:intergenic 50.0%
ATGTGCCTCAAGCTAAGGCA+AGG + chr1_2:11545941-11545960 None:intergenic 50.0%
CGGTAAAGTCCCAGTGTCAA+AGG - chr1_2:11546067-11546086 Msa0056070:intron 50.0%
GTCGAGGTAACCTTTGACAC+TGG + chr1_2:11546080-11546099 None:intergenic 50.0%
! AGAAGACAGTCGCTTTGTCG+AGG + chr1_2:11546096-11546115 None:intergenic 50.0%
GGGCTTGAGAAGGGATAGAT+TGG - chr1_2:11546243-11546262 Msa0056070:intron 50.0%
!! GAGTGAGGAGCATTGTGAGA+TGG - chr1_2:11546349-11546368 Msa0056070:intron 50.0%
!! GGAGCATTGTGAGATGGCAA+AGG - chr1_2:11546355-11546374 Msa0056070:intron 50.0%
AAAGGGTAGGGTCTGAGTAG+AGG - chr1_2:11546373-11546392 Msa0056070:intron 50.0%
AAGGGTAGGGTCTGAGTAGA+GGG - chr1_2:11546374-11546393 Msa0056070:intron 50.0%
TTGCCCACAGGGTAACAGTT+TGG + chr1_2:11546456-11546475 None:intergenic 50.0%
! CAGTCCTCGTGAGAAAGTGT+TGG + chr1_2:11546720-11546739 None:intergenic 50.0%
TTCTCACGAGGACTGCTGTT+TGG - chr1_2:11546725-11546744 Msa0056070:intron 50.0%
ACTGTCTGATTGATGGGGCT+CGG - chr1_2:11546748-11546767 Msa0056070:intron 50.0%
CGTGTCAGCAGACACTTATC+GGG - chr1_2:11546776-11546795 Msa0056070:intron 50.0%
AGCTAGTGAGGGGCTTACAT+TGG - chr1_2:11547420-11547439 Msa0056070:intron 50.0%
TTTGTAGGTTGCAGCAGTGG+TGG - chr1_2:11547827-11547846 Msa0056070:CDS 50.0%
! GCTCCATCTGAAGCTGATTC+TGG - chr1_2:11547868-11547887 Msa0056070:CDS 50.0%
GGTCCAGAATCAGCTTCAGA+TGG + chr1_2:11547874-11547893 None:intergenic 50.0%
CTTATGCCTGAGCAAGCAAC+TGG - chr1_2:11547925-11547944 Msa0056070:CDS 50.0%
TTAGCACCAGTTGCTTGCTC+AGG + chr1_2:11547934-11547953 None:intergenic 50.0%
! AGCAAGCAACTGGTGCTAAG+CGG - chr1_2:11547935-11547954 Msa0056070:CDS 50.0%
! TGCTTGTTCCCGAGGGTTTT+TGG - chr1_2:11547959-11547978 Msa0056070:CDS 50.0%
TGGTGCACTGCTCTGTGAAA+AGG - chr1_2:11548374-11548393 Msa0056070:intron 50.0%
!! GTCGTGAGTGCTGAGAAACA+AGG + chr1_2:11548543-11548562 None:intergenic 50.0%
CGTCTGAGAATCAGTTCAGG+AGG + chr1_2:11548577-11548596 None:intergenic 50.0%
CCACGTCTGAGAATCAGTTC+AGG + chr1_2:11548580-11548599 None:intergenic 50.0%
! CCTGAACTGATTCTCAGACG+TGG - chr1_2:11548577-11548596 Msa0056070:intron 50.0%
! GGGAGTCTTCTGTAAGTTGG+GGG - chr1_2:11548614-11548633 Msa0056070:intron 50.0%
CTTTGTGGATACTAGGCAGG+TGG - chr1_2:11548721-11548740 Msa0056070:intron 50.0%
GGCAATATGTGAGGACCAGT+TGG - chr1_2:11548879-11548898 Msa0056070:intron 50.0%
CAGTTGGCCAACTGGGATAA+GGG - chr1_2:11548895-11548914 Msa0056070:intron 50.0%
AGTTGGCCAACTGGGATAAG+GGG - chr1_2:11548896-11548915 Msa0056070:intron 50.0%
GGCACTGCTATACAGTGCAA+AGG - chr1_2:11549315-11549334 Msa0056070:intron 50.0%
CGGTGGTTGTGCTGTAAGTT+TGG - chr1_2:11549415-11549434 Msa0056070:intron 50.0%
GGAGGTCCCTAGATCAATCT+TGG - chr1_2:11550273-11550292 Msa0056070:CDS 50.0%
GGTCCCTAGATCAATCTTGG+AGG - chr1_2:11550276-11550295 Msa0056070:CDS 50.0%
GTGCAGGTAGCAATGTGAAC+AGG + chr1_2:11550992-11551011 None:intergenic 50.0%
TCACACAATACAGAGGGAGG+AGG + chr1_2:11551027-11551046 None:intergenic 50.0%
AAAGGATACACAGCGTACCG+AGG - chr1_2:11551497-11551516 Msa0056070:intron 50.0%
AAGGATACACAGCGTACCGA+GGG - chr1_2:11551498-11551517 Msa0056070:intron 50.0%
CCCAGGCACAAGGATTTACA+TGG + chr1_2:11551673-11551692 None:intergenic 50.0%
TCAGGGATGGATCTGCGTGT+CGG - chr1_2:11542373-11542392 Msa0056070:intron 55.0%
!! GTCGGTGTCAGTGTCATGTC+AGG - chr1_2:11542391-11542410 Msa0056070:intron 55.0%
ATGAGCAGATCAACGGCTCG+GGG - chr1_2:11542632-11542651 Msa0056070:intron 55.0%
GAACGCGGAAGTCTGGCATA+TGG - chr1_2:11542934-11542953 Msa0056070:intron 55.0%
CCCGCAGGACTCACAAATCT+TGG - chr1_2:11543029-11543048 Msa0056070:CDS 55.0%
!! TGGCATTGACGCACACGTAG+TGG - chr1_2:11543960-11543979 Msa0056070:intron 55.0%
AGGGCCAACACTTTCTCACG+AGG - chr1_2:11546713-11546732 Msa0056070:CDS 55.0%
! GCAAGCAACTGGTGCTAAGC+GGG - chr1_2:11547936-11547955 Msa0056070:CDS 55.0%
!! TGGGGTGCTACTGAAACCCA+AGG - chr1_2:11548790-11548809 Msa0056070:intron 55.0%
TGAGGACCAGTTGGCCAACT+GGG - chr1_2:11548888-11548907 Msa0056070:intron 55.0%
CCTTATCCCAGTTGGCCAAC+TGG + chr1_2:11548897-11548916 None:intergenic 55.0%
CCAGTTGGCCAACTGGGATA+AGG - chr1_2:11548894-11548913 Msa0056070:intron 55.0%
TGTGGGTGAACAGAAGGGAG+TGG + chr1_2:11549993-11550012 None:intergenic 55.0%
! GACGGGTTTCTAAACGCTCC+AGG - chr1_2:11550326-11550345 Msa0056070:CDS 55.0%
ATACAGAGGGAGGAGGATCC+AGG + chr1_2:11551020-11551039 None:intergenic 55.0%
ATACACAGCGTACCGAGGGA+GGG - chr1_2:11551502-11551521 Msa0056070:intron 55.0%
TGTTCCACGAAACCCTCCCT+CGG + chr1_2:11551517-11551536 None:intergenic 55.0%
TCCAACACTAGGTATGCCCC+AGG + chr1_2:11551690-11551709 None:intergenic 55.0%
!! GCATTGGTTCCGCCTCCAAG+TGG - chr1_2:11542912-11542931 Msa0056070:intron 60.0%
TTCCGCCTCCAAGTGGAACG+CGG - chr1_2:11542919-11542938 Msa0056070:intron 60.0%
TTCCGCGTTCCACTTGGAGG+CGG + chr1_2:11542924-11542943 None:intergenic 60.0%
GACTTCCGCGTTCCACTTGG+AGG + chr1_2:11542927-11542946 None:intergenic 60.0%
CCAGACTTCCGCGTTCCACT+TGG + chr1_2:11542930-11542949 None:intergenic 60.0%
CCAAGTGGAACGCGGAAGTC+TGG - chr1_2:11542927-11542946 Msa0056070:intron 60.0%
!! CAAGGGCGCCCAACAAACAG+AGG + chr1_2:11543746-11543765 None:intergenic 60.0%
! CATCTGGAGCACGACCCAAG+TGG + chr1_2:11547567-11547586 None:intergenic 60.0%
TAAGCGGGTGCTTGTTCCCG+AGG - chr1_2:11547951-11547970 Msa0056070:CDS 60.0%
AAGCGGGTGCTTGTTCCCGA+GGG - chr1_2:11547952-11547971 Msa0056070:CDS 60.0%
GTGAGGACCAGTTGGCCAAC+TGG - chr1_2:11548887-11548906 Msa0056070:intron 60.0%
TTGCTACCTGCACAGCTGCC+TGG - chr1_2:11550999-11551018 Msa0056070:intron 60.0%
GATACACAGCGTACCGAGGG+AGG - chr1_2:11551501-11551520 Msa0056070:intron 60.0%
CTAGGTATGCCCCAGGCACA+AGG + chr1_2:11551683-11551702 None:intergenic 60.0%
GCCTGGGGCATACCTAGTGT+TGG - chr1_2:11551686-11551705 Msa0056070:intron 60.0%
GAGGATCCAGGCAGCTGTGC+AGG + chr1_2:11551008-11551027 None:intergenic 65.0%
CGTACCGAGGGAGGGTTTCG+TGG - chr1_2:11551510-11551529 Msa0056070:intron 65.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 11541647 11551799 11541647 ID=Msa0056070;Name=Msa0056070
chr1_2 mRNA 11541647 11551799 11541647 ID=Msa0056070-mRNA-1;Parent=Msa0056070;Name=Msa0056070-mRNA-1;_AED=0.06;_eAED=0.06;_QI=90|0.92|0.92|1|0.92|0.85|14|227|1105
chr1_2 exon 11541647 11541968 11541647 ID=Msa0056070-mRNA-1:exon:4391;Parent=Msa0056070-mRNA-1
chr1_2 exon 11542050 11542197 11542050 ID=Msa0056070-mRNA-1:exon:4390;Parent=Msa0056070-mRNA-1
chr1_2 exon 11543008 11543271 11543008 ID=Msa0056070-mRNA-1:exon:4389;Parent=Msa0056070-mRNA-1
chr1_2 exon 11544480 11544710 11544480 ID=Msa0056070-mRNA-1:exon:4388;Parent=Msa0056070-mRNA-1
chr1_2 exon 11544822 11544893 11544822 ID=Msa0056070-mRNA-1:exon:4387;Parent=Msa0056070-mRNA-1
chr1_2 exon 11545051 11545249 11545051 ID=Msa0056070-mRNA-1:exon:4386;Parent=Msa0056070-mRNA-1
chr1_2 exon 11545331 11545612 11545331 ID=Msa0056070-mRNA-1:exon:4385;Parent=Msa0056070-mRNA-1
chr1_2 exon 11546494 11546741 11546494 ID=Msa0056070-mRNA-1:exon:4384;Parent=Msa0056070-mRNA-1
chr1_2 exon 11547304 11547412 11547304 ID=Msa0056070-mRNA-1:exon:4383;Parent=Msa0056070-mRNA-1
chr1_2 exon 11547592 11548328 11547592 ID=Msa0056070-mRNA-1:exon:4382;Parent=Msa0056070-mRNA-1
chr1_2 exon 11549015 11549270 11549015 ID=Msa0056070-mRNA-1:exon:4381;Parent=Msa0056070-mRNA-1
chr1_2 exon 11550056 11550652 11550056 ID=Msa0056070-mRNA-1:exon:4380;Parent=Msa0056070-mRNA-1
chr1_2 exon 11550735 11550841 11550735 ID=Msa0056070-mRNA-1:exon:4379;Parent=Msa0056070-mRNA-1
chr1_2 exon 11551737 11551799 11551737 ID=Msa0056070-mRNA-1:exon:4378;Parent=Msa0056070-mRNA-1
chr1_2 five_prime_UTR 11551737 11551799 11551737 ID=Msa0056070-mRNA-1:five_prime_utr;Parent=Msa0056070-mRNA-1
chr1_2 five_prime_UTR 11550815 11550841 11550815 ID=Msa0056070-mRNA-1:five_prime_utr;Parent=Msa0056070-mRNA-1
chr1_2 CDS 11550735 11550814 11550735 ID=Msa0056070-mRNA-1:cds;Parent=Msa0056070-mRNA-1
chr1_2 CDS 11550056 11550652 11550056 ID=Msa0056070-mRNA-1:cds;Parent=Msa0056070-mRNA-1
chr1_2 CDS 11549015 11549270 11549015 ID=Msa0056070-mRNA-1:cds;Parent=Msa0056070-mRNA-1
chr1_2 CDS 11547592 11548328 11547592 ID=Msa0056070-mRNA-1:cds;Parent=Msa0056070-mRNA-1
chr1_2 CDS 11547304 11547412 11547304 ID=Msa0056070-mRNA-1:cds;Parent=Msa0056070-mRNA-1
chr1_2 CDS 11546494 11546741 11546494 ID=Msa0056070-mRNA-1:cds;Parent=Msa0056070-mRNA-1
chr1_2 CDS 11545331 11545612 11545331 ID=Msa0056070-mRNA-1:cds;Parent=Msa0056070-mRNA-1
chr1_2 CDS 11545051 11545249 11545051 ID=Msa0056070-mRNA-1:cds;Parent=Msa0056070-mRNA-1
chr1_2 CDS 11544822 11544893 11544822 ID=Msa0056070-mRNA-1:cds;Parent=Msa0056070-mRNA-1
chr1_2 CDS 11544480 11544710 11544480 ID=Msa0056070-mRNA-1:cds;Parent=Msa0056070-mRNA-1
chr1_2 CDS 11543008 11543271 11543008 ID=Msa0056070-mRNA-1:cds;Parent=Msa0056070-mRNA-1
chr1_2 CDS 11542050 11542197 11542050 ID=Msa0056070-mRNA-1:cds;Parent=Msa0056070-mRNA-1
chr1_2 CDS 11541874 11541968 11541874 ID=Msa0056070-mRNA-1:cds;Parent=Msa0056070-mRNA-1
chr1_2 three_prime_UTR 11541647 11541873 11541647 ID=Msa0056070-mRNA-1:three_prime_utr;Parent=Msa0056070-mRNA-1
Gene Sequence

>Msa0056070

ATGAGCAGATCAACGGCTCGGGGTAAAAATAAAAGACCGAGACAAGGGGATGATGATACCGGAACTTCAGAAATATTGAGGAAAATATACAAAACAGGCGTAGCAACTGATGATGATATGAGCAAACTGTATATGATTACAAAGCCAGTCTGTTCAGGTTGTCGTGTTAATACTAAAGACAATCCGAATTGCTTCTGTGCATTGGTTCCGCCTCCAAGTGGAACGCGGAAGTCTGGCATATGGCAGAAGATATCTGATTTTGTTGATAGTCTTGGCTTTGACCCAAACACGGAACTTCGTGAATCTGCTAATTCACCCGCAGGACTCACAAATCTTGGAGCAACGTGTTATGCTAACAGCATACTCCAATGCTTGTATATGAATAAACGTTTTCGAGAAGGATTATTTTCTGTTGAACCAGATATTTTTCAGCAACAACCGGTGTTAGATCAATTGGCTCGGCTTTTTGCTCAGTTGCATTTAAGTAAAAAGGCTTTCATAGATTCTTCTCCATTTGTAAAAACGTTGGAGTTGGACAATGAAGTTCAGCAAGATAGCCATGAGTTCCTGACATTGCTTCTGTCATTGCTAGAGCGCTGCCTTAGTCGTTCCAAAATTTCCAAGGCAAGAACGATAGTTCAAGATCTTTTCCGGGGAAGTGTGTCTCATGTGACAACGTGCTCACAATGTGGAAGAGACTCTGAAGCTTCTTCCAAAATGGAAGACTTCTATGAGTTGGAGTTGAATGTCAAGGGATTGAAAAGTTTAGACGAGAGCTTAGATGATTACCTCACTGTTGAAGAGCTTAATGGAGACAATCAATATTTTTGTGAGTCATGTAAAACAAGGGTTGATGCTACTCGCAGCATCAAGCTGCGAACATTACCTGATGTGCTTAATTTTCAGCTTAAGCGCTATGTCTTCCTTCCAAAGACAACAACAAAGAAGAAAGTTACTTCTCCATTTTCATTCCCCGCTGAACTTAGTATGCACCACAGATTGTCTGAGCCATCTCAGTCTGAATTGATATATGACTTGTCAGCTGTTCTGATACACAAGGGAACTGCAGCTAATAGTGGTCATTACATTGCACACATCAAGGATGTGAACACAGGGCAATGGTGGGAATTTGATGATGAGCTTGTTACTAACTTGGGCCGTTGTCCATTTTCAGAAGAAGCTTCATGCTCTGCTTCTAAATCTGTTAAGAATGATCTGGATCATTCTAATTTCTCTGAAGCAAGGGTAGCTGACAGTAATGGAAGTGGTTCAAATGTAAAAGTTTCACAATCTTTACCCATGGAGACATTTTCATCTAGTGATGCATATATGTTGATGTACCATCTTAAGCATACCAAATTTTTTAGTGAGAACGGGGGAATGGAAACTAGTGCTAATCATACTGAAACAGTTGATGTTCCAATTACTGCACAAGATAATGATTGTCTTCCTTCTCATTTTTGTGAAGAGATTCAAAATTTCAATGCCTCATATCTTGATACTTGCCAGCAGTACAACCATAGGAAAGAGGTAGAATTGAGTCGTATCAGTGAGAGGAGAGAAGAAGTTCGATCTGTTTTAGCTGAAGCTCCTGTTAAACCACTGGAGCAACCGTATTTTTGGATTTATAGTGACTGGCTTCGTCAATGGGCTGAAAATGTTACTCCAAGTGCTATTGACAACACATCTATCCAATGTTCACACGGTAAAGTCCCAGTGTCAAAGGTTACCTCGACAAAGCGACTGTCTTCTAAAGCATGGGATAAGTTACTGTCTAAGTATGGTGGAGGGCCAACACTTTCTCACGAGGACTGCTGTTTGGACTGTCTGATTGATGGGGCTCGGAATGTCGTGTCAGCAGACACTTATCGGGATCAAAGAGAATCATTTAAGCAACTTGCACGGGATATTCTTGATGGAAAAAACGTAGATGGAAAGTACTACGTGTCTAGATCATGGTATGATTGCAAATCTTTTCTCTTGTCGTTTCTGTTTCTTCAGAAAGGAATAAGGGGTGATGGAGATAAGTTGCAGCAGTGGTGGAAAAGAAAAGTTGCCGATGCTCCATCTGAAGCTGATTCTGGACCAACAGCAGCTATTAGTTGTCCACATGGACAACTTATGCCTGAGCAAGCAACTGGTGCTAAGCGGGTGCTTGTTCCCGAGGGTTTTTGGCTCTTCTTATATGAAGATGCCACTTCTGTGAAAAATGATCTTCTGGTCTGCCCTACATTTCATTTAGACTCCAAAGAGTGCTCTGAATGCAGTAGCGAATTATCTGAAGTGTTTTGCATGGAGGACTCTATGAGGTTATTAAAACAAAGGCAGCGTCAGAGTCATGAGAAGTTGTTCAATGGGAAAAGTATGCCCCTCTCTCTAGATTGCACATATTTCTTAGTTCCTTCCTCTTGGATTTCAAAATGGAGAACGTATATCAACCCAGCTGTGAAGAATTCTGACACACCTGAAACATTAAATGTGGTGATTGGTGCACTGCTCTGTGAAAAGCACTCACGACTCATTGAAAGGCCTCCTGAACTGATTCTCAGACGTGGTGCTATATTTCCAAGGGAGTCTTCTGCAGGTGGCTTAACCATCATATCTGAGAATGATTGGAAATGTTTCTGCGAAGAATGGGGTGCTACTGAAACCCAAGGAGTATCTGCAAAGATTGAGAAAATTAATGATTCGGTGAATGCTACATCTGGATCTTGTGAAGAGATGGCAATATGTGAGGACCAGTTGGCCAACTGGGATAAGGGGAATAATGAAAGTGGGAATGGTCAATTTTCGATCAAGACTTGTCCTGAGGTTTGTGAAAGTTGCATTGGAGAAAAGGAAAGCTGTGAGTTAGTGCATAAACTTAATTATTCCAATGAGGATATATGTGTAATTCTTGTACGCGGAAAGGAGGTCCCTAGATCAATCTTGGAGGCTTCAAAGGGATTTGTTGAAACAGATCGACGGGTTTCTAAACGCTCCAGGAAGATTAAAAATGGGAGTTCAATTAATCTAAAAGTGTCTGCTTCAACATCAATTTACCAGCTGAAAATGATGATATGGGAATCCTTTGGGGTTGTCAAAGAAAATCAGATACTACAAAAAGGTGATATAACAATTGATCACATTGACGAAAATACTACACTTGTGGACGTTAACATATTTGCTGGAGATCAGATTATTGTGAGGGACTCTGAGATCCATGAAAATCGAGATATTGCTGATGAGCTGTGTAACGAGAAAAAGGATACACAGCGTACCGAGGGAGGGTTTCGTGGAACACTTTTGACTTCAAATGTTTCATCTCAGGTTGTGTAG
Protein sequence

>Msa0056070

MSRSTARGKNKRPRQGDDDTGTSEILRKIYKTGVATDDDMSKLYMITKPVCSGCRVNTKDNPNCFCALVPPPSGTRKSGIWQKISDFVDSLGFDPNTELRESANSPAGLTNLGATCYANSILQCLYMNKRFREGLFSVEPDIFQQQPVLDQLARLFAQLHLSKKAFIDSSPFVKTLELDNEVQQDSHEFLTLLLSLLERCLSRSKISKARTIVQDLFRGSVSHVTTCSQCGRDSEASSKMEDFYELELNVKGLKSLDESLDDYLTVEELNGDNQYFCESCKTRVDATRSIKLRTLPDVLNFQLKRYVFLPKTTTKKKVTSPFSFPAELSMHHRLSEPSQSELIYDLSAVLIHKGTAANSGHYIAHIKDVNTGQWWEFDDELVTNLGRCPFSEEASCSASKSVKNDLDHSNFSEARVADSNGSGSNVKVSQSLPMETFSSSDAYMLMYHLKHTKFFSENGGMETSANHTETVDVPITAQDNDCLPSHFCEEIQNFNASYLDTCQQYNHRKEVELSRISERREEVRSVLAEAPVKPLEQPYFWIYSDWLRQWAENVTPSAIDNTSIQCSHGKVPVSKVTSTKRLSSKAWDKLLSKYGGGPTLSHEDCCLDCLIDGARNVVSADTYRDQRESFKQLARDILDGKNVDGKYYVSRSWYDCKSFLLSFLFLQKGIRGDGDKLQQWWKRKVADAPSEADSGPTAAISCPHGQLMPEQATGAKRVLVPEGFWLFLYEDATSVKNDLLVCPTFHLDSKECSECSSELSEVFCMEDSMRLLKQRQRQSHEKLFNGKSMPLSLDCTYFLVPSSWISKWRTYINPAVKNSDTPETLNVVIGALLCEKHSRLIERPPELILRRGAIFPRESSAGGLTIISENDWKCFCEEWGATETQGVSAKIEKINDSVNATSGSCEEMAICEDQLANWDKGNNESGNGQFSIKTCPEVCESCIGEKESCELVHKLNYSNEDICVILVRGKEVPRSILEASKGFVETDRRVSKRSRKIKNGSSINLKVSASTSIYQLKMMIWESFGVVKENQILQKGDITIDHIDENTTLVDVNIFAGDQIIVRDSEIHENRDIADELCNEKKDTQRTEGGFRGTLLTSNVSSQVV*