AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0047070

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0047070 MtrunA17_Chr7g0246001 75.152 660 82 9 139 771 8 612 0.0 939
Msa0047070 MtrunA17_Chr7g0245981 69.336 512 108 8 14 478 1 510 0.0 651
Msa0047070 MtrunA17_Chr7g0245981 59.649 114 27 4 543 656 524 618 8.92e-14 75.5
Msa0047070 MtrunA17_Chr7g0245991 73.840 237 20 1 787 1023 1 195 7.86e-106 328
Msa0047070 MtrunA17_Chr7g0246021 74.675 154 22 3 97 250 25 161 7.33e-64 213
Msa0047070 MtrunA17_Chr7g0246011 86.207 87 10 1 14 100 1 85 4.22e-45 157
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0047070 AT1G01930.1 46.004 513 223 8 22 485 18 525 4.00e-139 430

Find 235 sgRNAs with CRISPR-Local

Find 1176 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAAACTTTCAGAAGGTTTA+TGG 0.142260 1_1:-79648513 Msa0047070:CDS
ATTCTAAACGCCGTCGTTTC+CGG 0.165360 1_1:-79652315 Msa0047070:CDS
TTGTGATTCTTCCATTTCTT+TGG 0.232877 1_1:+79648436 None:intergenic
TTGCCAGGTGCCACCATATA+TGG 0.249045 1_1:+79648545 None:intergenic
ATAAACAGGAGGAAATAAAA+AGG 0.266026 1_1:-79637721 Msa0047070:intron
CCTCAATCGGGTGTTATTCC+TGG 0.267311 1_1:+79650922 None:intergenic
TGAAGGTGGTTGAAGGGTTT+CGG 0.267880 1_1:+79652353 None:intergenic
ACAAATCAAACGATGGAAAT+AGG 0.270784 1_1:+79635530 None:intergenic
TTTGCTGGTTGTGTCTTTGA+TGG 0.284403 1_1:-79650872 Msa0047070:CDS
TGTTGTAATGAAAGGGAATT+AGG 0.295314 1_1:+79652477 None:intergenic
GTGCAGGAGGTGAAGGAGTC+TGG 0.303169 1_1:-79636216 Msa0047070:CDS
AGCCGAGTTCAAGACCTATT+TGG 0.310924 1_1:-79636577 Msa0047070:CDS
TTGAACTCGGCTTCATTTAG+AGG 0.319103 1_1:+79636588 None:intergenic
TGGTGCTGCTGAAGCAAAAT+TGG 0.321217 1_1:-79636517 Msa0047070:CDS
GCAATCTGCTGCGAAGGATA+TGG 0.335315 1_1:-79635755 Msa0047070:CDS
GAAATCTGCTGCGAAGGATA+TGG 0.341602 1_1:-79635881 Msa0047070:CDS
TGTTGTAATTCATCACTTGC+TGG 0.344617 1_1:-79637515 Msa0047070:intron
GGTTATGGAGCTCTTGGAAC+AGG 0.347141 1_1:-79648606 Msa0047070:CDS
CAGTCATCTAAAGATGCTTC+TGG 0.347821 1_1:-79649792 Msa0047070:CDS
GGTTGAAGGGTTTCGGAGGG+AGG 0.352482 1_1:+79652360 None:intergenic
ACGTGAAGCAGAAGAAATTA+AGG 0.352693 1_1:-79648067 Msa0047070:CDS
GCAGTCTGCTGCGAAGGATA+TGG 0.355180 1_1:-79635818 Msa0047070:CDS
GCAATCCGCAGCGAAGGATA+TGG 0.359699 1_1:-79635629 Msa0047070:CDS
AGCCTTCGCTCTGCTTTACT+TGG 0.361216 1_1:-79636159 Msa0047070:CDS
GGTTGCTGGTTGCTGAATGT+TGG 0.361806 1_1:+79647585 None:intergenic
GTCGCCAGATGGTGGGTTGC+TGG 0.364595 1_1:+79647571 None:intergenic
GAGTTGGCACTGCGTCTTCT+TGG 0.367555 1_1:+79648813 None:intergenic
TTCTCTAGCCTTTGCCAAAT+AGG 0.367790 1_1:+79636563 None:intergenic
TCTTCCATTTCTTTGGTCAA+TGG 0.370115 1_1:+79648443 None:intergenic
CTTAACATGCAATGCTTGTA+AGG 0.376948 1_1:-79652286 Msa0047070:CDS
CGACAATGGTCGAAGAAGTT+TGG 0.378683 1_1:+79652396 None:intergenic
TGGCTTCAAATCTTGACAAA+TGG 0.380995 1_1:-79648493 Msa0047070:CDS
ATTTCCATCGTTTGATTTGT+CGG 0.381246 1_1:-79635527 Msa0047070:CDS
TGTGATGTGTCAAGTATATC+TGG 0.383400 1_1:-79651148 Msa0047070:CDS
GCATCCGGTGGGCACTTTGC+TGG 0.386451 1_1:-79650887 Msa0047070:CDS
TTCAAAGGTGGTACAGCAAT+AGG 0.389182 1_1:+79636408 None:intergenic
CTCAAAATCCTCTTCCTTCA+CGG 0.390841 1_1:+79651198 None:intergenic
AACATTGAATCGATGAATAT+CGG 0.391637 1_1:+79652221 None:intergenic
TTTACTTGGGAAGGTGATTA+CGG 0.400782 1_1:-79636145 Msa0047070:CDS
CAAAGTGGACATGGCTAAGT+TGG 0.402553 1_1:-79648768 Msa0047070:CDS
TAGGATGTGAACTTGTTCTA+TGG 0.402680 1_1:+79635549 None:intergenic
GCAATCCGCAACAAAAGATA+TGG 0.403051 1_1:-79635692 Msa0047070:CDS
CGTGGTTTGAAGGTGGTTGA+AGG 0.403806 1_1:+79652346 None:intergenic
TGCCAGGTGCCACCATATAT+GGG 0.412149 1_1:+79648546 None:intergenic
GGACAGGAGGTTTGATGGAA+TGG 0.413738 1_1:-79636274 Msa0047070:CDS
TAGGGGACGAACCCCATATA+TGG 0.414554 1_1:-79648558 Msa0047070:CDS
GACCGCTGCATGCGGTTCTA+AGG 0.416971 1_1:-79636379 Msa0047070:CDS
TTGTCCATTGACCAAAGAAA+TGG 0.417421 1_1:-79648447 Msa0047070:CDS
GGCTTCAAATCTTGACAAAT+GGG 0.418280 1_1:-79648492 Msa0047070:CDS
CATATCTCCAAGAGTATCAT+TGG 0.418313 1_1:+79636044 None:intergenic
CTGTGGGACAGGAGGTTTGA+TGG 0.418887 1_1:-79636279 Msa0047070:CDS
TTGAAGGGTTTCGGAGGGAG+GGG 0.421556 1_1:+79652362 None:intergenic
TGGCTCACAAGACATTTCAT+AGG 0.423277 1_1:-79650838 Msa0047070:intron
TTACATCAGGCGGCACAATC+TGG 0.425393 1_1:-79648641 Msa0047070:CDS
AAAATAGCCAATGATACTCT+TGG 0.432979 1_1:-79636051 Msa0047070:CDS
AATGTTGGGTCATCGGCTGC+TGG 0.432994 1_1:+79647600 None:intergenic
AGGGTTTCGGAGGGAGGGGA+AGG 0.433262 1_1:+79652366 None:intergenic
CCAATGAATGTGGTTTAGTC+GGG 0.436283 1_1:-79637556 Msa0047070:CDS
TTCTCTGGTTCAATGATTGA+CGG 0.437927 1_1:+79647646 None:intergenic
CCCGACTAAACCACATTCAT+TGG 0.438880 1_1:+79637556 None:intergenic
GTCCCAGTACAGCTCTGAAT+TGG 0.440833 1_1:+79636121 None:intergenic
ATCGATGAATATCGGATTTG+AGG 0.441330 1_1:+79652229 None:intergenic
TTCTTCCTTCACCTAGGAAA+AGG 0.444488 1_1:-79636353 Msa0047070:CDS
ATTGAAGGTAAATAAGAGAT+TGG 0.447043 1_1:-79636010 Msa0047070:CDS
TGTAAAGATAAGCTATTTGT+CGG 0.449450 1_1:-79651052 Msa0047070:CDS
TATGGAAATTGAGGATTTGA+AGG 0.449937 1_1:-79635611 Msa0047070:CDS
TAGGTGAAGTTGACAATTGC+TGG 0.450889 1_1:-79651229 Msa0047070:CDS
ATGTCCGCAGGCCTACTCTC+AGG 0.451746 1_1:-79648910 Msa0047070:CDS
AGTGTTATCCGTGGTAAATC+CGG 0.452418 1_1:-79651082 Msa0047070:CDS
TATGAAGAAACAAATATTGA+AGG 0.453822 1_1:-79636025 Msa0047070:CDS
GCAACCAGCAACCCACCATC+TGG 0.453861 1_1:-79647575 Msa0047070:CDS
ATCCATGCATTAAAGATGAT+AGG 0.454638 1_1:-79648577 Msa0047070:CDS
CAAGCAGAACAATCCTCAAT+CGG 0.458682 1_1:+79650909 None:intergenic
GTTGCTGGTTGCTGAATGTT+GGG 0.459771 1_1:+79647586 None:intergenic
GGACCAATTCAGAGCTGTAC+TGG 0.459816 1_1:-79636124 Msa0047070:CDS
GATGTGCAAAGCAGTTTCTC+TGG 0.460207 1_1:+79647631 None:intergenic
GCCATGTCCACTTTGCTAGC+AGG 0.460843 1_1:+79648776 None:intergenic
CAAATCTTGACAAATGGGAT+TGG 0.460930 1_1:-79648487 Msa0047070:CDS
CTATTTGTCGGTCTTCAGAC+AGG 0.461240 1_1:-79651040 Msa0047070:CDS
GACAGGAGGTTTGATGGAAT+GGG 0.463270 1_1:-79636273 Msa0047070:CDS
AACAAAAGATATGGAAATTG+AGG 0.463508 1_1:-79635683 Msa0047070:CDS
ACCGAAAACAGAGCAGAAAC+AGG 0.469622 1_1:+79647542 None:intergenic
TGATGAATTACAACAGGAAA+AGG 0.474258 1_1:+79637523 None:intergenic
ATTTCTAACACATTGTGGAT+TGG 0.474497 1_1:+79648943 None:intergenic
ATATAACATCGCTGTGGGAC+AGG 0.475359 1_1:-79636290 Msa0047070:CDS
GCCAATGAATGTGGTTTAGT+CGG 0.476670 1_1:-79637557 Msa0047070:CDS
AGCAAGTGATGAATTACAAC+AGG 0.477294 1_1:+79637517 None:intergenic
GTTGAAGGGTTTCGGAGGGA+GGG 0.478400 1_1:+79652361 None:intergenic
TCCATGCATTAAAGATGATA+GGG 0.481771 1_1:-79648576 Msa0047070:CDS
GTTATATCAGTCCCTTCCAT+TGG 0.489040 1_1:+79636306 None:intergenic
GGCATCCGGTCGCCAGATGG+TGG 0.490273 1_1:+79647563 None:intergenic
GGGTTTCGGAGGGAGGGGAA+GGG 0.490331 1_1:+79652367 None:intergenic
TTCGTGATCTACTTACTGCT+TGG 0.490707 1_1:-79649057 Msa0047070:CDS
TCGCTCTGCTTTACTTGGGA+AGG 0.491109 1_1:-79636154 Msa0047070:CDS
ATATGATCGACGTGGTTTGA+AGG 0.493428 1_1:+79652336 None:intergenic
TTATATCAGTCCCTTCCATT+GGG 0.493852 1_1:+79636307 None:intergenic
CAACTCAACTCCTTTACATC+AGG 0.494747 1_1:-79648654 Msa0047070:CDS
CCCCTATCATCTTTAATGCA+TGG 0.495874 1_1:+79648575 None:intergenic
AGCAGAAGAAATTAAGGCTC+AGG 0.496633 1_1:-79648061 Msa0047070:intron
AATGGCTGCCCTCAAAAGTC+AGG 0.497233 1_1:-79637618 Msa0047070:CDS
AGGATTGTTCTGCTTGCATC+CGG 0.498149 1_1:-79650902 Msa0047070:CDS
CATTGTTTGTTGTAATGAAA+GGG 0.500099 1_1:+79652470 None:intergenic
CTCAATCGGGTGTTATTCCT+GGG 0.500869 1_1:+79650923 None:intergenic
ATTGTTCTGCTTGCATCCGG+TGG 0.502170 1_1:-79650899 Msa0047070:CDS
AGCAGCTGACGACTACTTGA+AGG 0.502660 1_1:+79648992 None:intergenic
GCTATGAAGTCTGTGGTTGA+TGG 0.503376 1_1:-79635496 Msa0047070:CDS
GATTGTGCCGCCTGATGTAA+AGG 0.504362 1_1:+79648644 None:intergenic
ATCCGCAAGCTCAAGAGAAA+AGG 0.505901 1_1:-79636477 Msa0047070:CDS
AGCGAAGGATATGGAAATTG+AGG 0.506894 1_1:-79635620 Msa0047070:CDS
ATTGCATGTTAAGCTAGAAC+CGG 0.508974 1_1:+79652296 None:intergenic
GCCTTCGCTCTGCTTTACTT+GGG 0.510431 1_1:-79636158 Msa0047070:CDS
AGAAAAGAGAGCAGCTGCTA+GGG 0.513577 1_1:-79637681 Msa0047070:CDS
CCATTGTTTGTTGTAATGAA+AGG 0.515278 1_1:+79652469 None:intergenic
TGCGAAGGATATGGAAATTG+AGG 0.517984 1_1:-79635746 Msa0047070:CDS
TGCGAAGGATATGGAAATTG+AGG 0.517984 1_1:-79635809 Msa0047070:CDS
TGCGAAGGATATGGAAATTG+AGG 0.517984 1_1:-79635872 Msa0047070:CDS
AGTCGTCAGCTGCTTTATGA+TGG 0.518461 1_1:-79648983 Msa0047070:CDS
GTTGCTGAATGTTGGGTCAT+CGG 0.519643 1_1:+79647593 None:intergenic
CAAGGGGCAGTCTGCTGCGA+AGG 0.521712 1_1:-79635824 Msa0047070:CDS
AGAATCACAAGCTGCTATGA+AGG 0.521983 1_1:-79648423 Msa0047070:intron
TCATCGGCTGCTGGATCGAT+AGG 0.524411 1_1:+79647609 None:intergenic
GCAATATTTCTAACACATTG+TGG 0.526259 1_1:+79648938 None:intergenic
GCAACCCACCATCTGGCGAC+CGG 0.527818 1_1:-79647568 Msa0047070:CDS
GCTGCCTTTCGCTATCAAGA+TGG 0.529136 1_1:-79635583 Msa0047070:CDS
CTTATCTTTACAGCTTTCAC+CGG 0.529666 1_1:+79651063 None:intergenic
GAAGGTAAATAAGAGATTGG+AGG 0.529817 1_1:-79636007 Msa0047070:CDS
AAAAGTATATATACGCTCAA+GGG 0.531845 1_1:-79635778 Msa0047070:CDS
TGTAAAGGTTATGGAGCTCT+TGG 0.531850 1_1:-79648612 Msa0047070:intron
GAGAAAAGAGAGCAGCTGCT+AGG 0.534310 1_1:-79637682 Msa0047070:CDS
TCCTGCTAGCAAAGTGGACA+TGG 0.535223 1_1:-79648777 Msa0047070:CDS
GAAAGATGTGCAGGAGGTGA+AGG 0.535532 1_1:-79636223 Msa0047070:CDS
CGCTGCATGCGGTTCTAAGG+TGG 0.536335 1_1:-79636376 Msa0047070:CDS
CGCAAGCTCAAGAGAAAAGG+TGG 0.537712 1_1:-79636474 Msa0047070:CDS
GAAAAGTATATATACGCTCA+AGG 0.538571 1_1:-79635779 Msa0047070:CDS
ACCTAGGAAAAGGATTAAGA+AGG 0.539456 1_1:-79636343 Msa0047070:CDS
CCACGGATAACACTTTGACC+TGG 0.541038 1_1:+79651091 None:intergenic
TGCTTCACTTTGTCTTCACA+AGG 0.543162 1_1:-79649748 Msa0047070:CDS
GGCAAGACTGTACATACTGC+CGG 0.543642 1_1:-79649771 Msa0047070:CDS
TGCCAAATAGGTCTTGAACT+CGG 0.543861 1_1:+79636575 None:intergenic
AAGACTTGTGTCCCAATGGA+AGG 0.545110 1_1:-79636318 Msa0047070:CDS
CCTTTCATTACAACAAACAA+TGG 0.546308 1_1:-79652469 Msa0047070:CDS
AGGTGGTTGAAGGGTTTCGG+AGG 0.546894 1_1:+79652356 None:intergenic
CATGCAATGCTTGTAAGGCT+CGG 0.547317 1_1:-79652281 Msa0047070:CDS
ACAGAGCAGAAACAGGCATC+CGG 0.548024 1_1:+79647549 None:intergenic
TGGTGCGAAATTATCGAAAG+AGG 0.548189 1_1:-79638286 Msa0047070:intron
CAAGGGGCAATCTGCTGCGA+AGG 0.550064 1_1:-79635761 Msa0047070:CDS
ACAGACTGCTCTGACTCAGT+TGG 0.550586 1_1:-79635980 Msa0047070:CDS
ATTGCTCCAACATCTGCTAC+AGG 0.552341 1_1:-79638327 Msa0047070:CDS
AAGCTTCACGAAAGATGTGC+AGG 0.552502 1_1:-79636232 Msa0047070:CDS
GACAGTGAAAATGAGTCTCC+AGG 0.554621 1_1:-79651109 Msa0047070:CDS
TGCAGGAGGTGAAGGAGTCT+GGG 0.554625 1_1:-79636215 Msa0047070:CDS
AAAGTGTAGATACACTCAAA+GGG 0.554726 1_1:-79635903 Msa0047070:CDS
AAATCAAGAAAACTTTCAGA+AGG 0.554976 1_1:-79648520 Msa0047070:CDS
GGAGGTGAAGGAGTCTGGGT+TGG 0.555934 1_1:-79636211 Msa0047070:CDS
AAAAGTGTAGATACACTCAA+AGG 0.556290 1_1:-79635904 Msa0047070:CDS
CAAGGGGCAATCCGCAGCGA+AGG 0.556340 1_1:-79635635 Msa0047070:CDS
CAAAGGGAAATCTGCTGCGA+AGG 0.558516 1_1:-79635887 Msa0047070:CDS
GTGGTTTGAAGGTGGTTGAA+GGG 0.559419 1_1:+79652347 None:intergenic
CTTTCAGAGGCCAATGAATG+TGG 0.559670 1_1:-79637566 Msa0047070:CDS
CACATTCATTGGCCTCTGAA+AGG 0.559741 1_1:+79637567 None:intergenic
AAGCAGAACAATCCTCAATC+GGG 0.560153 1_1:+79650910 None:intergenic
GATTGTCCTGTAGCAGATGT+TGG 0.562417 1_1:+79638321 None:intergenic
TATGTTGTGAGCGCCAAGGC+CGG 0.563141 1_1:-79649822 Msa0047070:CDS
ACAGGCATCCGGTCGCCAGA+TGG 0.563797 1_1:+79647560 None:intergenic
AGCTGCTACAGAGAGAAGAA+TGG 0.564381 1_1:-79637636 Msa0047070:CDS
TGAAAGGCTATTAGCTGAAG+TGG 0.565476 1_1:+79637583 None:intergenic
TGTGGTGTTCAGTCTGAAGC+TGG 0.566521 1_1:-79638363 Msa0047070:intron
CACGCCTCCTGCTAGCAAAG+TGG 0.566721 1_1:-79648783 Msa0047070:CDS
TTGTTCTGCTTGCATCCGGT+GGG 0.568007 1_1:-79650898 Msa0047070:CDS
GAAAAGTATAGATACGCTCA+AGG 0.571373 1_1:-79635842 Msa0047070:CDS
ACCCCATATATGGTGGCACC+TGG 0.571663 1_1:-79648548 Msa0047070:CDS
TGTCCGCAGGCCTACTCTCA+GGG 0.572087 1_1:-79648909 Msa0047070:CDS
GCATCCGGTCGCCAGATGGT+GGG 0.572296 1_1:+79647564 None:intergenic
GGAGAAGACTTGTGTCCCAA+TGG 0.572317 1_1:-79636322 Msa0047070:CDS
CTCAACTCCTTTACATCAGG+CGG 0.572843 1_1:-79648651 Msa0047070:CDS
GAAGCAAAATTGGACGTTAG+TGG 0.573636 1_1:-79636507 Msa0047070:CDS
GTGAAGACAAAGTGAAGCAC+CGG 0.574366 1_1:+79649752 None:intergenic
AAAACCATCTTGATAGCGAA+AGG 0.577594 1_1:+79635579 None:intergenic
CAATGGTCGAAGAAGTTTGG+TGG 0.580577 1_1:+79652399 None:intergenic
GACTGATATAACATCGCTGT+GGG 0.580737 1_1:-79636295 Msa0047070:CDS
CATTGTGGATTGGTGAAACA+TGG 0.591786 1_1:+79648953 None:intergenic
GGTGGTTGAAGGGTTTCGGA+GGG 0.591910 1_1:+79652357 None:intergenic
GACCAATTCAGAGCTGTACT+GGG 0.593790 1_1:-79636123 Msa0047070:CDS
CTTTGATGGTGATACACTTG+TGG 0.594651 1_1:-79650858 Msa0047070:CDS
GTTCAAGACCTATTTGGCAA+AGG 0.598442 1_1:-79636571 Msa0047070:CDS
AATCTCTGACAGTTGAGCCC+AGG 0.600326 1_1:-79650940 Msa0047070:CDS
GCCAGGTGCCACCATATATG+GGG 0.601737 1_1:+79648547 None:intergenic
TGGTTGAATTCAGTTCATCT+CGG 0.603175 1_1:+79636085 None:intergenic
AAAAGTATAGATACGCTCAA+GGG 0.604119 1_1:-79635841 Msa0047070:CDS
TTCAGCTAATAGCCTTTCAG+AGG 0.604540 1_1:-79637579 Msa0047070:CDS
AAAGCGTAGATATGCTCAAG+AGG 0.605173 1_1:-79635714 Msa0047070:CDS
GCAAAGTATAGATACGCTCA+AGG 0.611265 1_1:-79635653 Msa0047070:CDS
GTTATGGAGCTCTTGGAACA+GGG 0.613923 1_1:-79648605 Msa0047070:CDS
CCAGGAATAACACCCGATTG+AGG 0.614095 1_1:-79650922 Msa0047070:CDS
GGAGGCGTGTCAATGAGAGT+TGG 0.614796 1_1:+79648797 None:intergenic
CAAAGTATAGATACGCTCAA+GGG 0.614983 1_1:-79635652 Msa0047070:CDS
AAAGTATATATACGCTCAAG+GGG 0.615609 1_1:-79635777 Msa0047070:CDS
AGCTTTCACCGGATTTACCA+CGG 0.616164 1_1:+79651074 None:intergenic
GCAGCGGTCACATTGTTCAA+AGG 0.617843 1_1:+79636393 None:intergenic
CAAGCTCAAGAGAAAAGGTG+GGG 0.619925 1_1:-79636472 Msa0047070:CDS
TCCATCGTTTGATTTGTCGG+AGG 0.626060 1_1:-79635524 Msa0047070:CDS
TATTTGTCGGTCTTCAGACA+GGG 0.628383 1_1:-79651039 Msa0047070:CDS
AAAGTATAGATACGCTCAAG+GGG 0.633488 1_1:-79635840 Msa0047070:CDS
AGACTTGTGTCCCAATGGAA+GGG 0.634045 1_1:-79636317 Msa0047070:CDS
CTTCCCTGAGAGTAGGCCTG+CGG 0.639175 1_1:+79648906 None:intergenic
TCCCAAGTAAAGCAGAGCGA+AGG 0.640241 1_1:+79636157 None:intergenic
CACCTTAGAACCGCATGCAG+CGG 0.641728 1_1:+79636377 None:intergenic
AAAGTATAGATACGCTCAAG+GGG 0.641841 1_1:-79635651 Msa0047070:CDS
AACAATGTGACCGCTGCATG+CGG 0.642972 1_1:-79636387 Msa0047070:CDS
ATGTCCACTTTGCTAGCAGG+AGG 0.644597 1_1:+79648779 None:intergenic
CAGATATGTTGTGAGCGCCA+AGG 0.645321 1_1:-79649826 Msa0047070:CDS
ACAACCAGCAAAGTGCCCAC+CGG 0.645771 1_1:+79650883 None:intergenic
CCATGCATTAAAGATGATAG+GGG 0.647022 1_1:-79648575 Msa0047070:CDS
TAACATCGCTGTGGGACAGG+AGG 0.647179 1_1:-79636287 Msa0047070:CDS
AGGTGAAGTTGACAATTGCT+GGG 0.647510 1_1:-79651228 Msa0047070:CDS
AAAAGCTAGTGAGGTGCTTG+TGG 0.653025 1_1:-79636187 Msa0047070:CDS
CAATGAATGTGGTTTAGTCG+GGG 0.653073 1_1:-79637555 Msa0047070:CDS
CGTTTAGAATATGATCGACG+TGG 0.655039 1_1:+79652328 None:intergenic
GCAAGCTCAAGAGAAAAGGT+GGG 0.656480 1_1:-79636473 Msa0047070:CDS
TAAGCTAGAACCGGAAACGA+CGG 0.656895 1_1:+79652305 None:intergenic
AGCACCAAATTGCAAAACTG+AGG 0.657409 1_1:+79636533 None:intergenic
GCGGTCACATTGTTCAAAGG+TGG 0.657729 1_1:+79636396 None:intergenic
AGGTGGTTCTTCCTTCACCT+AGG 0.663668 1_1:-79636359 Msa0047070:CDS
GGCTGACGCTATGAAGTCTG+TGG 0.664603 1_1:-79635503 Msa0047070:CDS
GCCTCCGACAAATCAAACGA+TGG 0.667550 1_1:+79635523 None:intergenic
ATATTGCTATGAATGTCCGC+AGG 0.669783 1_1:-79648922 Msa0047070:CDS
TGATCGACGTGGTTTGAAGG+TGG 0.675028 1_1:+79652339 None:intergenic
GGACTGATATAACATCGCTG+TGG 0.675400 1_1:-79636296 Msa0047070:CDS
AAGCTCAAGAGAAAAGGTGG+GGG 0.678103 1_1:-79636471 Msa0047070:CDS
GGGAAGGGAGAAAACGACAA+TGG 0.679241 1_1:+79652382 None:intergenic
CTTCACGAAAGATGTGCAGG+AGG 0.685073 1_1:-79636229 Msa0047070:CDS
GGGACGAACCCCATATATGG+TGG 0.686205 1_1:-79648555 Msa0047070:CDS
CCAGGTCAAAGTGTTATCCG+TGG 0.691992 1_1:-79651091 Msa0047070:CDS
AATTTCCATATCCTTCGCTG+CGG 0.705001 1_1:+79635624 None:intergenic
GGTTCTGTGTCTGAAAGTGA+CGG 0.718841 1_1:+79636429 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATCTTCTAAATAAAAA+GGG + chr1_1:79635932-79635951 None:intergenic 10.0%
!!! TTTTTATCTTCTAAATAAAA+AGG + chr1_1:79635933-79635952 None:intergenic 10.0%
!!! TTTTTTACTAATGTTTAAAA+AGG - chr1_1:79637222-79637241 Msa0047070:intron 10.0%
!! GATATTTATCAAATAAAATA+TGG - chr1_1:79637269-79637288 Msa0047070:intron 10.0%
!! AATAAAAATGAATAGAAAAT+AGG + chr1_1:79638118-79638137 None:intergenic 10.0%
!!! TATACAATTTTTGATTTATT+TGG - chr1_1:79640612-79640631 Msa0047070:intron 10.0%
!!! AATTTTTTAAGCATTTAAAT+AGG + chr1_1:79642460-79642479 None:intergenic 10.0%
!! AAAATTAAATTAAAAAGAGA+AGG + chr1_1:79642652-79642671 None:intergenic 10.0%
!!! TTATTATTTTTATGAAACAA+AGG + chr1_1:79643169-79643188 None:intergenic 10.0%
!! CAAATATAAATAAAATAACA+TGG + chr1_1:79643275-79643294 None:intergenic 10.0%
!!! TTTGAAATTTGTTTTTTTAA+CGG - chr1_1:79643741-79643760 Msa0047070:intron 10.0%
!! AATAAATATTATAAAATCAC+GGG + chr1_1:79643933-79643952 None:intergenic 10.0%
!! TCAATATTAATTATCATTTA+TGG + chr1_1:79644301-79644320 None:intergenic 10.0%
!! AAAGATTTAACAAATATAAT+CGG - chr1_1:79644609-79644628 Msa0047070:intron 10.0%
!! TGAAAAATAAACAATATAAA+TGG - chr1_1:79644850-79644869 Msa0047070:intron 10.0%
!!! ATTTTAATTTTTTTATTTCC+AGG - chr1_1:79648163-79648182 Msa0047070:intron 10.0%
!! TGAAAAATAAACAATATAAA+TGG - chr1_1:79644850-79644869 Msa0047070:intron 10.0%
!!! GTAATTAAAAAATAGATTTT+GGG + chr1_1:79650669-79650688 None:intergenic 10.0%
!!! TGTAATTAAAAAATAGATTT+TGG + chr1_1:79650670-79650689 None:intergenic 10.0%
!!! AAATTTCAAGCTTTTTTATA+AGG - chr1_1:79635950-79635969 Msa0047070:CDS 15.0%
!! AATTGTTTAGTATACAATAT+CGG - chr1_1:79636099-79636118 Msa0047070:CDS 15.0%
!!! TAAGCAAAATTTAACATTTT+AGG + chr1_1:79636371-79636390 None:intergenic 15.0%
!!! AATTTAAAATGATTTATGTG+TGG - chr1_1:79636426-79636445 Msa0047070:CDS 15.0%
!!! TTTTACTGTAAAATTGTAAA+CGG - chr1_1:79638140-79638159 Msa0047070:intron 15.0%
!! ATTATATTTATGTTTAGTCT+TGG - chr1_1:79641757-79641776 Msa0047070:intron 15.0%
!! ACTAGACAAATATTAAAAAA+CGG + chr1_1:79642858-79642877 None:intergenic 15.0%
!! TGAACAAACAAAAAAAATAA+AGG + chr1_1:79642957-79642976 None:intergenic 15.0%
!!! ATTTTTTTCCTTAATGAATT+TGG - chr1_1:79643097-79643116 Msa0047070:intron 15.0%
!!! TTTTTTTCCTTAATGAATTT+GGG - chr1_1:79643098-79643117 Msa0047070:intron 15.0%
!!! ATATTTTGTTTTTGACTTTT+TGG - chr1_1:79644272-79644291 Msa0047070:intron 15.0%
!! TTAGAGAGATTTAAAAAATA+TGG - chr1_1:79644445-79644464 Msa0047070:intron 15.0%
!!! TTTTCAGTTATTGTATTATT+AGG + chr1_1:79644836-79644855 None:intergenic 15.0%
!!! GAATATTTTAATAAAAACCT+CGG + chr1_1:79647446-79647465 None:intergenic 15.0%
!!! TTAACATTTTTGAATAAATC+TGG - chr1_1:79647773-79647792 Msa0047070:intron 15.0%
!! AAAAAAATTAAAATTGCAGA+TGG + chr1_1:79648157-79648176 None:intergenic 15.0%
!!! TTTTCAGTTATTGTATTATT+AGG + chr1_1:79644836-79644855 None:intergenic 15.0%
!!! AAATATAAACATTGCTATTT+TGG - chr1_1:79649787-79649806 Msa0047070:CDS 15.0%
!!! TTTTTGTTTTTATTTCACTT+TGG + chr1_1:79650080-79650099 None:intergenic 15.0%
!!! GTTTTATTTTTAACATTTGT+CGG - chr1_1:79650185-79650204 Msa0047070:intron 15.0%
!!! TGATAAATATTTTAATCTTC+TGG - chr1_1:79650262-79650281 Msa0047070:intron 15.0%
!!! GTTTTATCTAAAAAATAAAC+AGG - chr1_1:79650290-79650309 Msa0047070:intron 15.0%
!! AAAAATTATGAAGTAAATTC+TGG + chr1_1:79651341-79651360 None:intergenic 15.0%
!! ATTGTTATAAATGATGTATG+TGG - chr1_1:79636307-79636326 Msa0047070:CDS 20.0%
!! CATTTAATAAATGATGTATG+TGG + chr1_1:79636346-79636365 None:intergenic 20.0%
!! AATTTAATTAATACATCCTC+CGG + chr1_1:79636403-79636422 None:intergenic 20.0%
!!! GAAATATTAATCTTTTACCA+TGG + chr1_1:79637346-79637365 None:intergenic 20.0%
!! AGTTATATGAGATAAATAAG+TGG + chr1_1:79637562-79637581 None:intergenic 20.0%
!!! TTTTAGTCTTTTATGTATAG+TGG - chr1_1:79637676-79637695 Msa0047070:CDS 20.0%
!!! TTTAGTCTTTTATGTATAGT+GGG - chr1_1:79637677-79637696 Msa0047070:CDS 20.0%
!!! ATTTTTTTGTTTGTGTATGT+TGG - chr1_1:79638497-79638516 Msa0047070:intron 20.0%
!!! TTATAAACCATTTTCAACAT+GGG + chr1_1:79638626-79638645 None:intergenic 20.0%
!!! TTTATAAACCATTTTCAACA+TGG + chr1_1:79638627-79638646 None:intergenic 20.0%
!!! CACTTATAAATTGTTTTACA+AGG - chr1_1:79638777-79638796 Msa0047070:intron 20.0%
!!! TAAATGTTATTGGTAGTAAA+AGG - chr1_1:79639733-79639752 Msa0047070:intron 20.0%
!!! AAATGTTATTGGTAGTAAAA+GGG - chr1_1:79639734-79639753 Msa0047070:intron 20.0%
!! TCAAAAATACTTTCTTCAAT+TGG - chr1_1:79640743-79640762 Msa0047070:intron 20.0%
!! TAAATAGCTTTCAATAACAA+GGG + chr1_1:79640777-79640796 None:intergenic 20.0%
!! ATAAATAGCTTTCAATAACA+AGG + chr1_1:79640778-79640797 None:intergenic 20.0%
!! TAAATAGCAATAAAAAGTCA+TGG + chr1_1:79640898-79640917 None:intergenic 20.0%
!! TAAAATCATAGTTGTAAATC+AGG + chr1_1:79641077-79641096 None:intergenic 20.0%
!! CAGTTTAAATTTGTAATGTT+TGG + chr1_1:79641135-79641154 None:intergenic 20.0%
!! AAAGAATAGCAAATTGAATT+TGG + chr1_1:79641252-79641271 None:intergenic 20.0%
!!! ATATTCTGAATTGTTTTTGT+TGG - chr1_1:79641301-79641320 Msa0047070:intron 20.0%
!!! TATTCTGAATTGTTTTTGTT+GGG - chr1_1:79641302-79641321 Msa0047070:intron 20.0%
!! AAGTTGAGATTGAAAAATAA+TGG + chr1_1:79641607-79641626 None:intergenic 20.0%
!! GAACATATTTAAAAATTCAC+GGG + chr1_1:79641667-79641686 None:intergenic 20.0%
!! CGAACATATTTAAAAATTCA+CGG + chr1_1:79641668-79641687 None:intergenic 20.0%
!!! TTTGTTTTTGTTTTGTTTTG+TGG - chr1_1:79641980-79641999 Msa0047070:intron 20.0%
!!! GTTTTTTTGATTGAAAATCT+AGG - chr1_1:79642065-79642084 Msa0047070:intron 20.0%
!!! TTAAAAGATTTTATCCTCTA+TGG - chr1_1:79642217-79642236 Msa0047070:intron 20.0%
!! AACTCATACATAAAAAAGTA+CGG + chr1_1:79642821-79642840 None:intergenic 20.0%
!! TAATCTAGGTTAATGTTATT+AGG + chr1_1:79642988-79643007 None:intergenic 20.0%
!!! ACTTATTTCTTATGTAATCT+AGG + chr1_1:79643002-79643021 None:intergenic 20.0%
!! GATTACATAAGAAATAAGTT+AGG - chr1_1:79643003-79643022 Msa0047070:intron 20.0%
!! TAGAAATACGAAGAAAAAAA+GGG + chr1_1:79643078-79643097 None:intergenic 20.0%
!! ATAGAAATACGAAGAAAAAA+AGG + chr1_1:79643079-79643098 None:intergenic 20.0%
!!! ATGGGAAAAATATTTGTTAT+TGG + chr1_1:79643198-79643217 None:intergenic 20.0%
!!! TTTTCCCATGTTATTTTTTT+AGG - chr1_1:79643209-79643228 Msa0047070:intron 20.0%
!! GAATCCTAAAAAAATAACAT+GGG + chr1_1:79643216-79643235 None:intergenic 20.0%
!! TGAATCCTAAAAAAATAACA+TGG + chr1_1:79643217-79643236 None:intergenic 20.0%
!!! CTAATACATATGTTATTTTC+TGG + chr1_1:79643658-79643677 None:intergenic 20.0%
!! TTTATTACAAGACAATTCAA+TGG + chr1_1:79643712-79643731 None:intergenic 20.0%
!! TTGAGTGTAAAATTATTTAC+TGG + chr1_1:79643849-79643868 None:intergenic 20.0%
!! ACATATAAAAAATGTACAAG+TGG + chr1_1:79644370-79644389 None:intergenic 20.0%
!! TTGATATATTCAAATGTACA+GGG - chr1_1:79644722-79644741 Msa0047070:intron 20.0%
!!! TTGTCACAATACAATTTTAT+AGG - chr1_1:79645144-79645163 Msa0047070:intron 20.0%
!!! CAAAATAGCAATTTTATTAG+TGG - chr1_1:79645865-79645884 Msa0047070:intron 20.0%
!! ATAATCTATACCATAAGTTT+GGG - chr1_1:79646207-79646226 Msa0047070:intron 20.0%
!!! ATATCCTCAATTTTAAAAAC+AGG - chr1_1:79646877-79646896 Msa0047070:intron 20.0%
!!! AAATCCTGTTTTTAAAATTG+AGG + chr1_1:79646884-79646903 None:intergenic 20.0%
!!! TCAATTTTAAAAACAGGATT+TGG - chr1_1:79646883-79646902 Msa0047070:intron 20.0%
!!! TTTTTTTTGAAAACATCCAA+TGG - chr1_1:79647204-79647223 Msa0047070:intron 20.0%
!!! TTTTTTTGAAAACATCCAAT+GGG - chr1_1:79647205-79647224 Msa0047070:intron 20.0%
!!! AATGTTCCTAAATTTTTATG+GGG + chr1_1:79647296-79647315 None:intergenic 20.0%
!!! CAATGTTCCTAAATTTTTAT+GGG + chr1_1:79647297-79647316 None:intergenic 20.0%
!! GAAAAACATTTAAATATCTC+TGG - chr1_1:79647527-79647546 Msa0047070:intron 20.0%
!! CTAAAATTACAACTCAATTT+GGG + chr1_1:79647631-79647650 None:intergenic 20.0%
!!! TCTAAAATTACAACTCAATT+TGG + chr1_1:79647632-79647651 None:intergenic 20.0%
!!! AATTGAGTTGTAATTTTAGA+TGG - chr1_1:79647632-79647651 Msa0047070:CDS 20.0%
!!! TCACTATGGATTAAATAAAA+AGG - chr1_1:79647665-79647684 Msa0047070:CDS 20.0%
!!! ATGGATTAAATAAAAAGGTT+TGG - chr1_1:79647670-79647689 Msa0047070:CDS 20.0%
!! AATACTTTCATTCCTTAAAA+CGG + chr1_1:79648867-79648886 None:intergenic 20.0%
!! TTGATATATTCAAATGTACA+GGG - chr1_1:79644722-79644741 Msa0047070:intron 20.0%
!! TTATCTAAAAAATAAACAGG+AGG - chr1_1:79650293-79650312 Msa0047070:intron 20.0%
!! AAAAGAATTACAGTAATTCT+GGG + chr1_1:79650630-79650649 None:intergenic 20.0%
!! GAAAAAATCAAAAACTGAAA+CGG - chr1_1:79650705-79650724 Msa0047070:intron 20.0%
!! TATGAAGAAACAAATATTGA+AGG - chr1_1:79652000-79652019 Msa0047070:intron 20.0%
!!! TTTTCTACGTTTTTAGTTTG+GGG + chr1_1:79635508-79635527 None:intergenic 25.0%
!!! GTTTTCTACGTTTTTAGTTT+GGG + chr1_1:79635509-79635528 None:intergenic 25.0%
!!! TGTTTTCTACGTTTTTAGTT+TGG + chr1_1:79635510-79635529 None:intergenic 25.0%
!!! CATTGTTTGTTGTAATGAAA+GGG + chr1_1:79635558-79635577 None:intergenic 25.0%
! AACATTGAATCGATGAATAT+CGG + chr1_1:79635807-79635826 None:intergenic 25.0%
!!! CGAGCTTTATTGATTTTTTT+TGG - chr1_1:79635892-79635911 Msa0047070:CDS 25.0%
! CAAATTACTTTATGTGACTA+TGG + chr1_1:79635997-79636016 None:intergenic 25.0%
!! TCACATAAAGTAATTTGTGT+TGG - chr1_1:79636000-79636019 Msa0047070:CDS 25.0%
!! ATAAAGTAATTTGTGTTGGT+AGG - chr1_1:79636004-79636023 Msa0047070:CDS 25.0%
!! TAAAGTAATTTGTGTTGGTA+GGG - chr1_1:79636005-79636024 Msa0047070:CDS 25.0%
!! ATTTTGCTTATAATAGTGAC+CGG - chr1_1:79636381-79636400 Msa0047070:CDS 25.0%
! CAAGTTAGAATAAATTCTAG+AGG - chr1_1:79636534-79636553 Msa0047070:CDS 25.0%
!! TGTCATTATGTTTTGTGTAT+TGG - chr1_1:79636708-79636727 Msa0047070:intron 25.0%
! TGTAAAGATAAGCTATTTGT+CGG - chr1_1:79636973-79636992 Msa0047070:intron 25.0%
! ATCATCAATTCCTGTTATAT+TGG - chr1_1:79637389-79637408 Msa0047070:intron 25.0%
!! TTGTAACCTTTTCTTTTAAC+TGG - chr1_1:79637465-79637484 Msa0047070:intron 25.0%
! AATCACAATCTTAACAAGAT+TGG + chr1_1:79637515-79637534 None:intergenic 25.0%
! TAAGATTGTGATTACATGTA+TGG - chr1_1:79637522-79637541 Msa0047070:CDS 25.0%
! AAGACACAATATTGATCTTA+TGG - chr1_1:79637828-79637847 Msa0047070:intron 25.0%
! AGACACAATATTGATCTTAT+GGG - chr1_1:79637829-79637848 Msa0047070:intron 25.0%
! AAACTAGAAGAAGAATGTAT+AGG + chr1_1:79637903-79637922 None:intergenic 25.0%
!! TAAATTTTACAACGAGAATG+AGG - chr1_1:79637938-79637957 Msa0047070:intron 25.0%
! GAATTTGGTCAATAATTATG+AGG + chr1_1:79638088-79638107 None:intergenic 25.0%
! AAAATAGGAAGATAGGAATT+TGG + chr1_1:79638103-79638122 None:intergenic 25.0%
! TGAATAGAAAATAGGAAGAT+AGG + chr1_1:79638110-79638129 None:intergenic 25.0%
!!! TTTAGATGACTGTTTTTTTC+CGG + chr1_1:79638225-79638244 None:intergenic 25.0%
! GTCAAAAATCATGATCAATA+GGG + chr1_1:79638819-79638838 None:intergenic 25.0%
! TGTCAAAAATCATGATCAAT+AGG + chr1_1:79638820-79638839 None:intergenic 25.0%
! ACAACGATAGTAAGTAAAAT+TGG + chr1_1:79638865-79638884 None:intergenic 25.0%
! TATTGGCATATTCATATTGT+AGG - chr1_1:79638942-79638961 Msa0047070:intron 25.0%
! AAATCAAGAAAACTTTCAGA+AGG - chr1_1:79639505-79639524 Msa0047070:intron 25.0%
! GTTGAAAACATTTCATGTTA+GGG - chr1_1:79639780-79639799 Msa0047070:intron 25.0%
! AGCTAGAGTAAAAAAATTGA+TGG - chr1_1:79639931-79639950 Msa0047070:intron 25.0%
! ACATACAATGACCTAAAATA+TGG + chr1_1:79640510-79640529 None:intergenic 25.0%
!! TTGATTTATTTGGTTCAGAA+TGG - chr1_1:79640622-79640641 Msa0047070:intron 25.0%
! ATAGTTGTAAATCAGGATAA+TGG + chr1_1:79641070-79641089 None:intergenic 25.0%
! TTGTGAATTATGAAAATGAG+AGG - chr1_1:79641197-79641216 Msa0047070:intron 25.0%
! AGCAAATTGAATTTGGAAAA+CGG + chr1_1:79641245-79641264 None:intergenic 25.0%
! ATTCTTTGTTCTGATGTTTA+TGG - chr1_1:79641265-79641284 Msa0047070:intron 25.0%
!!! AAATTTTAGCAATGCAAAAG+TGG - chr1_1:79641419-79641438 Msa0047070:intron 25.0%
!! TATATTGATGTTGCTTCAAA+TGG - chr1_1:79642146-79642165 Msa0047070:intron 25.0%
! TTACTAATACTTAGAAGCTA+GGG - chr1_1:79642387-79642406 Msa0047070:intron 25.0%
!! CATTTTTGTACTGAATTGTT+GGG - chr1_1:79642574-79642593 Msa0047070:intron 25.0%
!!! TTTTGCTTTTGTGGTTTATT+GGG - chr1_1:79642597-79642616 Msa0047070:intron 25.0%
!! ACTCATACATAAAAAAGTAC+GGG + chr1_1:79642820-79642839 None:intergenic 25.0%
!!! TCTAGCATCACTTTTTTTTT+AGG - chr1_1:79643128-79643147 Msa0047070:intron 25.0%
!!! CTAGCATCACTTTTTTTTTA+GGG - chr1_1:79643129-79643148 Msa0047070:intron 25.0%
! ATGGGAATCCTAAAAAAATA+CGG + chr1_1:79643256-79643275 None:intergenic 25.0%
! CTATGCTTGAATGTATATAT+AGG - chr1_1:79643386-79643405 Msa0047070:intron 25.0%
! TGAATGTATATATAGGAGAT+AGG - chr1_1:79643393-79643412 Msa0047070:intron 25.0%
!!! TTATGCTAGTCTTATAATTG+TGG + chr1_1:79643493-79643512 None:intergenic 25.0%
! GTGTAAAATTATTTACTGGT+TGG + chr1_1:79643845-79643864 None:intergenic 25.0%
!! GTTTTGTCAATAAAAAACGT+TGG + chr1_1:79643977-79643996 None:intergenic 25.0%
!!! AAAACTTGTCCAAAGTTTTT+TGG - chr1_1:79643992-79644011 Msa0047070:intron 25.0%
! ATGTATCCATTTGAATTGAA+GGG + chr1_1:79644122-79644141 None:intergenic 25.0%
! GTTTAATCACTTTACATTGA+CGG + chr1_1:79644163-79644182 None:intergenic 25.0%
! TGGTATACATTTCCATTTAA+TGG - chr1_1:79644544-79644563 Msa0047070:intron 25.0%
! GGTATACATTTCCATTTAAT+GGG - chr1_1:79644545-79644564 Msa0047070:intron 25.0%
! GTATACATTTCCATTTAATG+GGG - chr1_1:79644546-79644565 Msa0047070:intron 25.0%
! TATACATTTCCATTTAATGG+GGG - chr1_1:79644547-79644566 Msa0047070:intron 25.0%
!!! GGCAAACTATTATTTTAAGA+GGG - chr1_1:79644568-79644587 Msa0047070:intron 25.0%
!!! GCAAACTATTATTTTAAGAG+GGG - chr1_1:79644569-79644588 Msa0047070:intron 25.0%
!!! CAAACTATTATTTTAAGAGG+GGG - chr1_1:79644570-79644589 Msa0047070:intron 25.0%
! CTTGATATATTCAAATGTAC+AGG - chr1_1:79644721-79644740 Msa0047070:intron 25.0%
! TGATATATTCAAATGTACAG+GGG - chr1_1:79644723-79644742 Msa0047070:intron 25.0%
! TCATTAACCTGTAATTATGT+AGG + chr1_1:79644800-79644819 None:intergenic 25.0%
! ATCAAGGAAAAAATAGAAAG+GGG + chr1_1:79645048-79645067 None:intergenic 25.0%
! CATCAAGGAAAAAATAGAAA+GGG + chr1_1:79645049-79645068 None:intergenic 25.0%
! TCATCAAGGAAAAAATAGAA+AGG + chr1_1:79645050-79645069 None:intergenic 25.0%
!! TCACAATACAATTTTATAGG+TGG - chr1_1:79645147-79645166 Msa0047070:intron 25.0%
! CTAGAAATATGGTAGATAAA+GGG + chr1_1:79645580-79645599 None:intergenic 25.0%
!! AATTTTATGTTGGATTCCAT+GGG - chr1_1:79645614-79645633 Msa0047070:intron 25.0%
! TTAAAAGAAACTGGATTACT+TGG + chr1_1:79645659-79645678 None:intergenic 25.0%
!!! TGCTATTTTGATTGTATATG+TGG + chr1_1:79645855-79645874 None:intergenic 25.0%
!! GTAAAGAATGCTTTTCTAAA+TGG + chr1_1:79646094-79646113 None:intergenic 25.0%
!!! TTTACATCAAGTTGATGTAA+AGG - chr1_1:79646109-79646128 Msa0047070:intron 25.0%
! GATAATCTATACCATAAGTT+TGG - chr1_1:79646206-79646225 Msa0047070:intron 25.0%
! TCTCAAGAAAAATGAAACAT+GGG + chr1_1:79646353-79646372 None:intergenic 25.0%
!!! ATTCGTGATTTTAGAAGTAA+AGG - chr1_1:79646450-79646469 Msa0047070:intron 25.0%
!! TTAAAAACAGGATTTGGTAA+AGG - chr1_1:79646889-79646908 Msa0047070:intron 25.0%
!!! GCTGAAAAATGTATTTTTGT+TGG + chr1_1:79647084-79647103 None:intergenic 25.0%
!!! AAAATACATTTTTCAGCTCT+TGG - chr1_1:79647087-79647106 Msa0047070:intron 25.0%
!!! AAACACTTTTAAAGGTAAGT+CGG - chr1_1:79647158-79647177 Msa0047070:intron 25.0%
!! ATGTTCCTAAATTTTTATGG+GGG + chr1_1:79647295-79647314 None:intergenic 25.0%
!! GCAATGTTCCTAAATTTTTA+TGG + chr1_1:79647298-79647317 None:intergenic 25.0%
! TTTAATCCATAGTGATGTAT+GGG + chr1_1:79647660-79647679 None:intergenic 25.0%
! ATTTAATCCATAGTGATGTA+TGG + chr1_1:79647661-79647680 None:intergenic 25.0%
! TGCCTAAGATATTGAAAATT+AGG - chr1_1:79647803-79647822 Msa0047070:intron 25.0%
! GCCTAAGATATTGAAAATTA+GGG - chr1_1:79647804-79647823 Msa0047070:intron 25.0%
!! ACCCTAATTTTCAATATCTT+AGG + chr1_1:79647808-79647827 None:intergenic 25.0%
!! TAACACTCATTGTATTTTTC+AGG + chr1_1:79647987-79648006 None:intergenic 25.0%
!! AGAAGGTTATATGAAAGTTT+TGG - chr1_1:79648055-79648074 Msa0047070:intron 25.0%
!!! ATTTTTTTATTTCCAGGACA+AGG - chr1_1:79648169-79648188 Msa0047070:intron 25.0%
! TTAAAAGTTCTTCAAATCAG+AGG + chr1_1:79648552-79648571 None:intergenic 25.0%
!!! TCTGATTTGAAGAACTTTTA+AGG - chr1_1:79648551-79648570 Msa0047070:CDS 25.0%
!!! CTGATTTGAAGAACTTTTAA+GGG - chr1_1:79648552-79648571 Msa0047070:CDS 25.0%
!!! AATGTTTTCTGAAGTTAGAA+GGG + chr1_1:79648665-79648684 None:intergenic 25.0%
!!! AAATGTTTTCTGAAGTTAGA+AGG + chr1_1:79648666-79648685 None:intergenic 25.0%
! CTTGATATATTCAAATGTAC+AGG - chr1_1:79644721-79644740 Msa0047070:intron 25.0%
! TGATATATTCAAATGTACAG+GGG - chr1_1:79644723-79644742 Msa0047070:intron 25.0%
! TCATTAACCTGTAATTATGT+AGG + chr1_1:79644800-79644819 None:intergenic 25.0%
!!! TTTGTTGCTTTGACAAATAT+TGG - chr1_1:79649638-79649657 Msa0047070:intron 25.0%
!!! CATTTACAAATCTTTAGAAC+AGG - chr1_1:79650052-79650071 Msa0047070:intron 25.0%
! ATAAACAGGAGGAAATAAAA+AGG - chr1_1:79650304-79650323 Msa0047070:intron 25.0%
! TAAACAGGAGGAAATAAAAA+GGG - chr1_1:79650305-79650324 Msa0047070:intron 25.0%
! TGCAGTATTTGTAATTAAAC+CGG + chr1_1:79650551-79650570 None:intergenic 25.0%
! CAAAAGAATTACAGTAATTC+TGG + chr1_1:79650631-79650650 None:intergenic 25.0%
! AACAATAAGAAAAACCATTC+AGG + chr1_1:79650829-79650848 None:intergenic 25.0%
!!! GAAATCATTTTTGATAACTC+AGG - chr1_1:79651150-79651169 Msa0047070:CDS 25.0%
!!! GGCTATTTTCAATTTTTCTT+TGG + chr1_1:79651963-79651982 None:intergenic 25.0%
! ATTGAAGGTAAATAAGAGAT+TGG - chr1_1:79652015-79652034 Msa0047070:intron 25.0%
!! AAAAGTATATATACGCTCAA+GGG - chr1_1:79652247-79652266 Msa0047070:CDS 25.0%
!! AATTTCCATATCTTTTGTTG+CGG + chr1_1:79652341-79652360 None:intergenic 25.0%
! AACAAAAGATATGGAAATTG+AGG - chr1_1:79652342-79652361 Msa0047070:CDS 25.0%
TGTTGTAATGAAAGGGAATT+AGG + chr1_1:79635551-79635570 None:intergenic 30.0%
!! CCATTGTTTGTTGTAATGAA+AGG + chr1_1:79635559-79635578 None:intergenic 30.0%
CCTTTCATTACAACAAACAA+TGG - chr1_1:79635556-79635575 Msa0047070:CDS 30.0%
TACAAGATGAACATAGTGAA+GGG + chr1_1:79635843-79635862 None:intergenic 30.0%
TTACAAGATGAACATAGTGA+AGG + chr1_1:79635844-79635863 None:intergenic 30.0%
CACTATGTTCATCTTGTAAT+TGG - chr1_1:79635845-79635864 Msa0047070:CDS 30.0%
GTCATATCCATTAATTGATG+TGG + chr1_1:79636163-79636182 None:intergenic 30.0%
CATTTATAACAATGACCAGA+GGG + chr1_1:79636300-79636319 None:intergenic 30.0%
TCATTTATAACAATGACCAG+AGG + chr1_1:79636301-79636320 None:intergenic 30.0%
!! TTAGCTTTTTCTTCCAAACA+TGG + chr1_1:79636502-79636521 None:intergenic 30.0%
TCTGCACTATGTAAAAGTTA+CGG - chr1_1:79636626-79636645 Msa0047070:intron 30.0%
CTAGAAGCTCAATCAAAAAA+GGG + chr1_1:79636685-79636704 None:intergenic 30.0%
ACTAGAAGCTCAATCAAAAA+AGG + chr1_1:79636686-79636705 None:intergenic 30.0%
ATGGTTGAAATTTCATTGTG+AGG - chr1_1:79637288-79637307 Msa0047070:intron 30.0%
TATGCATGATATATACACCA+TGG - chr1_1:79637326-79637345 Msa0047070:intron 30.0%
ATGATAAACAGTATGCTTCA+CGG + chr1_1:79637374-79637393 None:intergenic 30.0%
ATCAATTCCTGTTATATTGG+AGG - chr1_1:79637392-79637411 Msa0047070:intron 30.0%
TTATATTGGAGGTCTAACAT+TGG - chr1_1:79637403-79637422 Msa0047070:intron 30.0%
!! TAACATTGGAAGTATTGTGT+TGG - chr1_1:79637417-79637436 Msa0047070:intron 30.0%
!! AACATTGGAAGTATTGTGTT+GGG - chr1_1:79637418-79637437 Msa0047070:intron 30.0%
!! TATTGTGTTGGGATTGATTT+TGG - chr1_1:79637429-79637448 Msa0047070:intron 30.0%
ACTCATCCAGTTAAAAGAAA+AGG + chr1_1:79637474-79637493 None:intergenic 30.0%
TGATAAGTTATCCTCATTGT+AGG - chr1_1:79637597-79637616 Msa0047070:CDS 30.0%
CATAATAGAAACCTACAATG+AGG + chr1_1:79637611-79637630 None:intergenic 30.0%
CTATTATGAACAGCTAACAT+TGG - chr1_1:79637623-79637642 Msa0047070:CDS 30.0%
ACAACTATCTAGAGAAACTT+AGG + chr1_1:79637984-79638003 None:intergenic 30.0%
AGTTTCTCTAGATAGTTGTT+TGG - chr1_1:79637985-79638004 Msa0047070:intron 30.0%
CACGAAGCAAATAAAACATT+TGG + chr1_1:79638378-79638397 None:intergenic 30.0%
CTGAAATTAACATATTGAGC+TGG - chr1_1:79638400-79638419 Msa0047070:intron 30.0%
AATTTCTCCTCTTAAAGTAC+AGG - chr1_1:79638665-79638684 Msa0047070:intron 30.0%
!! CATTATGAGTTCTAAAGTCT+TGG + chr1_1:79638744-79638763 None:intergenic 30.0%
TACAAGGTAGCAATGATAAT+TGG - chr1_1:79638793-79638812 Msa0047070:intron 30.0%
TGCAGAGCTATATGTAAAAT+TGG - chr1_1:79638913-79638932 Msa0047070:intron 30.0%
TGTAAAATTGGACTGACTAT+TGG - chr1_1:79638925-79638944 Msa0047070:intron 30.0%
ATTTCTAACACATTGTGGAT+TGG + chr1_1:79639085-79639104 None:intergenic 30.0%
! GCAATATTTCTAACACATTG+TGG + chr1_1:79639090-79639109 None:intergenic 30.0%
!! ACGTTCATCATTTTTGTTAC+TGG + chr1_1:79639310-79639329 None:intergenic 30.0%
ATCCATGCATTAAAGATGAT+AGG - chr1_1:79639448-79639467 Msa0047070:intron 30.0%
TCCATGCATTAAAGATGATA+GGG - chr1_1:79639449-79639468 Msa0047070:intron 30.0%
GAAAACTTTCAGAAGGTTTA+TGG - chr1_1:79639512-79639531 Msa0047070:intron 30.0%
TTGTGATTCTTCCATTTCTT+TGG + chr1_1:79639592-79639611 None:intergenic 30.0%
AAGGTGATTCTGATATTTCT+AGG - chr1_1:79639621-79639640 Msa0047070:intron 30.0%
!! GACTTGCTGATAAATGTTAT+TGG - chr1_1:79639723-79639742 Msa0047070:intron 30.0%
GGTTGAAAACATTTCATGTT+AGG - chr1_1:79639779-79639798 Msa0047070:intron 30.0%
CTTCCAATAGATATTACCAT+AGG - chr1_1:79640050-79640069 Msa0047070:intron 30.0%
CAACCTATGGTAATATCTAT+TGG + chr1_1:79640056-79640075 None:intergenic 30.0%
TATTACCATAGGTTGTCAAT+AGG - chr1_1:79640061-79640080 Msa0047070:intron 30.0%
!! CCTTTTTAAGGAAAGTTTAG+GGG + chr1_1:79640259-79640278 None:intergenic 30.0%
!! CCCTTTTTAAGGAAAGTTTA+GGG + chr1_1:79640260-79640279 None:intergenic 30.0%
CCCTAAACTTTCCTTAAAAA+GGG - chr1_1:79640257-79640276 Msa0047070:intron 30.0%
!! TCCCTTTTTAAGGAAAGTTT+AGG + chr1_1:79640261-79640280 None:intergenic 30.0%
! TAATTTTCACCACTACTAAC+AGG - chr1_1:79640720-79640739 Msa0047070:intron 30.0%
!! TATTTTTGACCTGTTAGTAG+TGG + chr1_1:79640732-79640751 None:intergenic 30.0%
! CAAACAAGTTTAAGACTCTA+AGG + chr1_1:79640829-79640848 None:intergenic 30.0%
!! TTTGTTTTCTTGATCGTTGT+TGG - chr1_1:79640845-79640864 Msa0047070:intron 30.0%
! TATTTCATTTTCAGCATCTG+TGG - chr1_1:79640943-79640962 Msa0047070:intron 30.0%
! ATATAACGCCACAATGTTTT+CGG - chr1_1:79641028-79641047 Msa0047070:intron 30.0%
GAAGAAAAACAGAGAAATGA+AGG + chr1_1:79641100-79641119 None:intergenic 30.0%
!! GATCTAGAAATATTGACTTG+CGG - chr1_1:79641363-79641382 Msa0047070:intron 30.0%
!! ATCTAGAAATATTGACTTGC+GGG - chr1_1:79641364-79641383 Msa0047070:intron 30.0%
ACACATATTTGTCATCATTG+CGG + chr1_1:79641732-79641751 None:intergenic 30.0%
!!! GGTTATGAGTTAGTTTTTTG+AGG - chr1_1:79641855-79641874 Msa0047070:intron 30.0%
!!! GGTTATGAGTTAGTTTTTTG+AGG - chr1_1:79641855-79641874 Msa0047070:intron 30.0%
TAGTATGGAAATCTTGAATC+TGG - chr1_1:79642043-79642062 Msa0047070:intron 30.0%
CTTACTAATACTTAGAAGCT+AGG - chr1_1:79642386-79642405 Msa0047070:intron 30.0%
TAAGCATTTAAATAGGCGTA+CGG + chr1_1:79642453-79642472 None:intergenic 30.0%
CCAACAATTCAGTACAAAAA+TGG + chr1_1:79642576-79642595 None:intergenic 30.0%
!! CCATTTTTGTACTGAATTGT+TGG - chr1_1:79642573-79642592 Msa0047070:intron 30.0%
!! GTTTTGCTTTTGTGGTTTAT+TGG - chr1_1:79642596-79642615 Msa0047070:intron 30.0%
AGCATTACCCAAATTCATTA+AGG + chr1_1:79643108-79643127 None:intergenic 30.0%
!!! TAGTTGTGCCGTATTTTTTT+AGG - chr1_1:79643245-79643264 Msa0047070:intron 30.0%
!! GAGTGTTGATTAGTGTATTT+AGG + chr1_1:79643463-79643482 None:intergenic 30.0%
GACAATGCATAATATATGCA+AGG - chr1_1:79643607-79643626 Msa0047070:intron 30.0%
!!! ACACTACATCTGTTTTTTGT+AGG + chr1_1:79643688-79643707 None:intergenic 30.0%
CATGTATCCATTTGAATTGA+AGG + chr1_1:79644123-79644142 None:intergenic 30.0%
GTTGAAATGAGAATTACACA+TGG + chr1_1:79644409-79644428 None:intergenic 30.0%
ATCTCTCTAACATACATTTG+AGG + chr1_1:79644435-79644454 None:intergenic 30.0%
CAAATGTGTAAATGCATTTG+AGG + chr1_1:79644492-79644511 None:intergenic 30.0%
!!! GGGCAAACTATTATTTTAAG+AGG - chr1_1:79644567-79644586 Msa0047070:intron 30.0%
AAATATAATCGGAAGAGTAG+TGG - chr1_1:79644620-79644639 Msa0047070:intron 30.0%
AATATAATCGGAAGAGTAGT+GGG - chr1_1:79644621-79644640 Msa0047070:intron 30.0%
AATCAGTAGAAAAGAATGAG+AGG - chr1_1:79644688-79644707 Msa0047070:intron 30.0%
TAGGATCTCTGCAATTAATT+AGG + chr1_1:79644781-79644800 None:intergenic 30.0%
TATGTAGTCAAAAGGTTTCT+TGG - chr1_1:79644957-79644976 Msa0047070:intron 30.0%
ATGTAGTCAAAAGGTTTCTT+GGG - chr1_1:79644958-79644977 Msa0047070:intron 30.0%
AGTTGACAAACATTTCATCA+AGG + chr1_1:79645064-79645083 None:intergenic 30.0%
TTTGTCAACTTCAACATGTT+TGG - chr1_1:79645074-79645093 Msa0047070:intron 30.0%
! AGGTTATTGTACTTTTGTAG+GGG + chr1_1:79645316-79645335 None:intergenic 30.0%
! CAGGTTATTGTACTTTTGTA+GGG + chr1_1:79645317-79645336 None:intergenic 30.0%
! TCAGGTTATTGTACTTTTGT+AGG + chr1_1:79645318-79645337 None:intergenic 30.0%
GGACTTCTTTATAAAAATCG+CGG + chr1_1:79645408-79645427 None:intergenic 30.0%
AGGATCTTAAGATACTTGAA+GGG + chr1_1:79645444-79645463 None:intergenic 30.0%
!! CATAGCTTTTGTTGTAAGTT+TGG + chr1_1:79645517-79645536 None:intergenic 30.0%
GCTAGAAATATGGTAGATAA+AGG + chr1_1:79645581-79645600 None:intergenic 30.0%
! CAATTTTATGTTGGATTCCA+TGG - chr1_1:79645613-79645632 Msa0047070:intron 30.0%
!! CTGGATCTTTTAAAAGAAAC+TGG + chr1_1:79645668-79645687 None:intergenic 30.0%
!! AGGGTATTTTTATGAATCAG+CGG + chr1_1:79645700-79645719 None:intergenic 30.0%
AATTGAGTTTGCAAGATCAA+AGG + chr1_1:79645723-79645742 None:intergenic 30.0%
!!! ATTCCAAGGAAGTATTTTAG+AGG - chr1_1:79645740-79645759 Msa0047070:intron 30.0%
!! GTCTTTGAAATCAAAGAACT+TGG + chr1_1:79645767-79645786 None:intergenic 30.0%
AGATTGAAGAAGTCTTTGTA+TGG + chr1_1:79645998-79646017 None:intergenic 30.0%
CTCTCAAGAAAAATGAAACA+TGG + chr1_1:79646354-79646373 None:intergenic 30.0%
!! TGATTTTAGAAGTAAAGGCT+CGG - chr1_1:79646455-79646474 Msa0047070:intron 30.0%
TAGGAGACATAATTGGAAAT+GGG - chr1_1:79646499-79646518 Msa0047070:intron 30.0%
!!! ACTGGTTTTAAGTGATTTCT+TGG - chr1_1:79646531-79646550 Msa0047070:intron 30.0%
!!! AGTTCTGGTTTTTTTCCTAA+CGG - chr1_1:79646558-79646577 Msa0047070:intron 30.0%
AAATTACCTGTTTGTTCTTG+AGG - chr1_1:79646616-79646635 Msa0047070:intron 30.0%
TGGTATTTCCTTTCCTATTT+GGG - chr1_1:79646756-79646775 Msa0047070:intron 30.0%
ACAGATCCTGAAATTGATAA+GGG + chr1_1:79646808-79646827 None:intergenic 30.0%
AACAGATCCTGAAATTGATA+AGG + chr1_1:79646809-79646828 None:intergenic 30.0%
ACATAAAGAAGTAGAACATG+TGG + chr1_1:79646833-79646852 None:intergenic 30.0%
TATCACAAAAATTCCCTTCA+GGG + chr1_1:79646964-79646983 None:intergenic 30.0%
TTACAATCCTAACACAAAGA+AGG + chr1_1:79647031-79647050 None:intergenic 30.0%
! GTACATCCAAACACTTTTAA+AGG - chr1_1:79647150-79647169 Msa0047070:intron 30.0%
!! GACTTACCTTTAAAAGTGTT+TGG + chr1_1:79647159-79647178 None:intergenic 30.0%
CAGCATCATATCTCATAAAT+AGG + chr1_1:79647259-79647278 None:intergenic 30.0%
! TGTTCCTAAATTTTTATGGG+GGG + chr1_1:79647294-79647313 None:intergenic 30.0%
AACATTGCTCTCAAACATAA+TGG - chr1_1:79647310-79647329 Msa0047070:intron 30.0%
AAAGAATAGACATCTTCTTG+AGG + chr1_1:79647345-79647364 None:intergenic 30.0%
!!! GGAGAGTTTTTTCAACATAA+AGG + chr1_1:79647425-79647444 None:intergenic 30.0%
TTACAACTCAATTTGGGAAA+AGG + chr1_1:79647625-79647644 None:intergenic 30.0%
TTAATCCATAGTGATGTATG+GGG + chr1_1:79647659-79647678 None:intergenic 30.0%
! AGATTTTACTAACAGAGAGA+AGG - chr1_1:79648038-79648057 Msa0047070:intron 30.0%
AAATCAATGTGCGTAGATAA+AGG - chr1_1:79648097-79648116 Msa0047070:CDS 30.0%
TTGAAATAGAGAAGAAAGAC+CGG - chr1_1:79648201-79648220 Msa0047070:intron 30.0%
!! CTAAAATCTAGTTCTTTGTC+TGG + chr1_1:79648343-79648362 None:intergenic 30.0%
! TTCATTCCTTAAAACGGATT+TGG + chr1_1:79648861-79648880 None:intergenic 30.0%
GATCTATGAACTTACATTGA+AGG + chr1_1:79648926-79648945 None:intergenic 30.0%
!! ATTTTTAGGCAGCATGTTTT+TGG - chr1_1:79649275-79649294 Msa0047070:intron 30.0%
!! TTTTTAGGCAGCATGTTTTT+GGG - chr1_1:79649276-79649295 Msa0047070:intron 30.0%
TAGGATCTCTGCAATTAATT+AGG + chr1_1:79644781-79644800 None:intergenic 30.0%
!!! AACATTGCTATTTTGGTGTT+TGG - chr1_1:79649794-79649813 Msa0047070:CDS 30.0%
!! CATTTTGGTCACACTAAAAA+GGG + chr1_1:79649871-79649890 None:intergenic 30.0%
! CTCTAATATAGCATGCATTT+TGG + chr1_1:79649886-79649905 None:intergenic 30.0%
ACAGAAGATAAATTGCAGAA+TGG + chr1_1:79650157-79650176 None:intergenic 30.0%
TGATGAATTACAACAGGAAA+AGG + chr1_1:79650505-79650524 None:intergenic 30.0%
AGTATTTGTAATTAAACCGG+TGG + chr1_1:79650548-79650567 None:intergenic 30.0%
AAAATCAAAAACTGAAACGG+TGG - chr1_1:79650708-79650727 Msa0047070:intron 30.0%
TGTTCATGTTTAGAAAAGCA+TGG + chr1_1:79650773-79650792 None:intergenic 30.0%
AAATCTTTATAGGGTGAAAC+TGG + chr1_1:79651085-79651104 None:intergenic 30.0%
TGGTGCTTGAAATCTTTATA+GGG + chr1_1:79651094-79651113 None:intergenic 30.0%
ATGGTGCTTGAAATCTTTAT+AGG + chr1_1:79651095-79651114 None:intergenic 30.0%
!! TCATTTTTGATAACTCAGGA+TGG - chr1_1:79651154-79651173 Msa0047070:CDS 30.0%
!! ATAATCAAAGCCTTTGAGAT+AGG + chr1_1:79651214-79651233 None:intergenic 30.0%
TATCAAGTCCTTACAACTTA+CGG + chr1_1:79651292-79651311 None:intergenic 30.0%
GATAATGAATTTGATGCTGA+TGG - chr1_1:79651312-79651331 Msa0047070:intron 30.0%
AACAGACATTATCGAAACAT+CGG + chr1_1:79651374-79651393 None:intergenic 30.0%
AAAATAGCCAATGATACTCT+TGG - chr1_1:79651974-79651993 Msa0047070:intron 30.0%
GAAAAAGACTGAAAATAACG+AGG - chr1_1:79652069-79652088 Msa0047070:intron 30.0%
! TGAAAATAACGAGGTTTTTG+AGG - chr1_1:79652078-79652097 Msa0047070:intron 30.0%
! AAAAGTGTAGATACACTCAA+AGG - chr1_1:79652121-79652140 Msa0047070:intron 30.0%
AAAGTGTAGATACACTCAAA+GGG - chr1_1:79652122-79652141 Msa0047070:intron 30.0%
! AAAAGTATAGATACGCTCAA+GGG - chr1_1:79652184-79652203 Msa0047070:intron 30.0%
! GAAAAGTATATATACGCTCA+AGG - chr1_1:79652246-79652265 Msa0047070:CDS 30.0%
AAAGTATATATACGCTCAAG+GGG - chr1_1:79652248-79652267 Msa0047070:CDS 30.0%
TATGGAAATTGAGGATTTGA+AGG - chr1_1:79652162-79652181 Msa0047070:intron 30.0%
!!! CTATCAAGATGGTTTTGATA+AGG - chr1_1:79652453-79652472 Msa0047070:CDS 30.0%
ACAAATCAAACGATGGAAAT+AGG + chr1_1:79652498-79652517 None:intergenic 30.0%
!! ATTTCCATCGTTTGATTTGT+CGG - chr1_1:79652498-79652517 Msa0047070:exon 30.0%
ATTGCATGTTAAGCTAGAAC+CGG + chr1_1:79635732-79635751 None:intergenic 35.0%
CTTAACATGCAATGCTTGTA+AGG - chr1_1:79635739-79635758 Msa0047070:CDS 35.0%
ATCGATGAATATCGGATTTG+AGG + chr1_1:79635799-79635818 None:intergenic 35.0%
TTCGTTGCCACATCAATTAA+TGG - chr1_1:79636153-79636172 Msa0047070:CDS 35.0%
AGCATAGAAATCACCATGTT+TGG - chr1_1:79636486-79636505 Msa0047070:CDS 35.0%
AAACCTGTACTAAACAAGGA+TGG - chr1_1:79636559-79636578 Msa0047070:CDS 35.0%
!! AGAAGGCGTAAAACTGATTT+TGG + chr1_1:79636594-79636613 None:intergenic 35.0%
ATAAGCAAGCATATCAAGCT+AGG + chr1_1:79636768-79636787 None:intergenic 35.0%
!! TGCTTGCTTATGTTGATGAT+AGG - chr1_1:79636777-79636796 Msa0047070:intron 35.0%
TGTGATGTGTCAAGTATATC+TGG - chr1_1:79636877-79636896 Msa0047070:intron 35.0%
CTTATCTTTACAGCTTTCAC+CGG + chr1_1:79636965-79636984 None:intergenic 35.0%
TGTTGTATCATGATGTTCAG+AGG - chr1_1:79637058-79637077 Msa0047070:intron 35.0%
GTTGAAATTTCATTGTGAGG+TGG - chr1_1:79637291-79637310 Msa0047070:intron 35.0%
TGTTAGACCTCCAATATAAC+AGG + chr1_1:79637402-79637421 None:intergenic 35.0%
! CAATCTTAACAAGATTGGCT+TGG + chr1_1:79637510-79637529 None:intergenic 35.0%
!! AGTCTTTTATGTATAGTGGG+AGG - chr1_1:79637680-79637699 Msa0047070:CDS 35.0%
! GCTATTTCCCATGTTGAAAA+TGG - chr1_1:79638616-79638635 Msa0047070:intron 35.0%
CCATGCATTAAAGATGATAG+GGG - chr1_1:79639450-79639469 Msa0047070:intron 35.0%
TGGCTTCAAATCTTGACAAA+TGG - chr1_1:79639532-79639551 Msa0047070:intron 35.0%
GGCTTCAAATCTTGACAAAT+GGG - chr1_1:79639533-79639552 Msa0047070:intron 35.0%
CAAATCTTGACAAATGGGAT+TGG - chr1_1:79639538-79639557 Msa0047070:intron 35.0%
TTGTCCATTGACCAAAGAAA+TGG - chr1_1:79639578-79639597 Msa0047070:intron 35.0%
TCTTCCATTTCTTTGGTCAA+TGG + chr1_1:79639585-79639604 None:intergenic 35.0%
AACATTTCATGTTAGGGAAC+CGG - chr1_1:79639786-79639805 Msa0047070:intron 35.0%
!!! TTTTACTCTAGCTCTTCTCT+CGG + chr1_1:79639924-79639943 None:intergenic 35.0%
ACGTGAAGCAGAAGAAATTA+AGG - chr1_1:79639958-79639977 Msa0047070:intron 35.0%
! CAGGTACAGCTTTAATCTTT+CGG - chr1_1:79639983-79640002 Msa0047070:intron 35.0%
AGTCCTAGAAAACTAACATG+AGG + chr1_1:79640028-79640047 None:intergenic 35.0%
! AACTGCATCTTTAGAAATCG+TGG - chr1_1:79640199-79640218 Msa0047070:intron 35.0%
CCCCTAAACTTTCCTTAAAA+AGG - chr1_1:79640256-79640275 Msa0047070:intron 35.0%
! CTCAGTAACATCCCTTTTTA+AGG + chr1_1:79640271-79640290 None:intergenic 35.0%
TAGAACTCTTTATCCCTGAT+TGG + chr1_1:79640331-79640350 None:intergenic 35.0%
! TTCTCTGGTTCAATGATTGA+CGG + chr1_1:79640382-79640401 None:intergenic 35.0%
!!! TGTTTTCGGTGCCATATTTT+AGG - chr1_1:79640496-79640515 Msa0047070:intron 35.0%
TTAGGTCATTGTATGTGTCT+AGG - chr1_1:79640514-79640533 Msa0047070:intron 35.0%
TAGGTCATTGTATGTGTCTA+GGG - chr1_1:79640515-79640534 Msa0047070:intron 35.0%
AGAGAGAGAAAACAGAAACA+TGG - chr1_1:79640550-79640569 Msa0047070:intron 35.0%
! TAAATAAAGAGAGCACGTGA+AGG - chr1_1:79640574-79640593 Msa0047070:intron 35.0%
! AAATAAAGAGAGCACGTGAA+GGG - chr1_1:79640575-79640594 Msa0047070:intron 35.0%
! TATAACGCCACAATGTTTTC+GGG - chr1_1:79641029-79641048 Msa0047070:intron 35.0%
! TAATGTTTGGAGCGAAAGAT+GGG + chr1_1:79641122-79641141 None:intergenic 35.0%
CTGTTATTGAGTGTAGTTTG+AGG - chr1_1:79641152-79641171 Msa0047070:intron 35.0%
! TCACTGATTGAAACACAACA+TGG + chr1_1:79641341-79641360 None:intergenic 35.0%
TGTTGTGTTTCAATCAGTGA+CGG - chr1_1:79641341-79641360 Msa0047070:intron 35.0%
!! TCTAGAAATATTGACTTGCG+GGG - chr1_1:79641365-79641384 Msa0047070:intron 35.0%
!! TTGTTTTGTGGAGATGAAGA+TGG - chr1_1:79641992-79642011 Msa0047070:intron 35.0%
! TGTTTTGTGGAGATGAAGAT+GGG - chr1_1:79641993-79642012 Msa0047070:intron 35.0%
!!! TAGTTCTAGCGTTGTTTTGT+TGG - chr1_1:79642093-79642112 Msa0047070:intron 35.0%
AACGACTACTACCATCAATA+CGG + chr1_1:79642189-79642208 None:intergenic 35.0%
! TGGTTCGTAATTGGTTGTTT+TGG - chr1_1:79642344-79642363 Msa0047070:intron 35.0%
AACTTGAGTCCTTTCTATGT+TGG - chr1_1:79642419-79642438 Msa0047070:intron 35.0%
CACTGCGTTTATTTGCAATT+TGG - chr1_1:79642482-79642501 Msa0047070:intron 35.0%
!! ATTGTTGGGTTTTGCTTTTG+TGG - chr1_1:79642588-79642607 Msa0047070:intron 35.0%
AAGTTAGGCTTGCATAACTT+TGG - chr1_1:79643018-79643037 Msa0047070:intron 35.0%
GTATATATAGGAGATAGGAG+AGG - chr1_1:79643398-79643417 Msa0047070:intron 35.0%
TGCATAATATATGCAAGGTC+TGG - chr1_1:79643612-79643631 Msa0047070:intron 35.0%
GCATAATATATGCAAGGTCT+GGG - chr1_1:79643613-79643632 Msa0047070:intron 35.0%
CATAATATATGCAAGGTCTG+GGG - chr1_1:79643614-79643633 Msa0047070:intron 35.0%
CACTCATTTATAATATCGCG+AGG - chr1_1:79643784-79643803 Msa0047070:intron 35.0%
CATTTATAATATCGCGAGGA+AGG - chr1_1:79643788-79643807 Msa0047070:intron 35.0%
TATACCTCGCCAAAAAACTT+TGG + chr1_1:79644004-79644023 None:intergenic 35.0%
ACGTTTCCCTTCAATTCAAA+TGG - chr1_1:79644113-79644132 Msa0047070:intron 35.0%
CTCTAACATACATTTGAGGA+TGG + chr1_1:79644431-79644450 None:intergenic 35.0%
!! TAATGGGCGAAACTCTTTTA+TGG - chr1_1:79644524-79644543 Msa0047070:intron 35.0%
! AATAGTTTGCCCCCATTAAA+TGG + chr1_1:79644559-79644578 None:intergenic 35.0%
ATATAATCGGAAGAGTAGTG+GGG - chr1_1:79644622-79644641 Msa0047070:intron 35.0%
!! CTTTTCTACTGATTGAAACC+AGG + chr1_1:79644682-79644701 None:intergenic 35.0%
CAGAGATCCTACATAATTAC+AGG - chr1_1:79644790-79644809 Msa0047070:intron 35.0%
TTGCGAGTTATGTAGTCAAA+AGG - chr1_1:79644949-79644968 Msa0047070:intron 35.0%
TATTCCCACTACAGAACAAT+TGG + chr1_1:79645007-79645026 None:intergenic 35.0%
! GGTTATTGTACTTTTGTAGG+GGG + chr1_1:79645315-79645334 None:intergenic 35.0%
TTTATAAAGAAGTCCCTTCC+CGG - chr1_1:79645413-79645432 Msa0047070:intron 35.0%
CAGGATCTTAAGATACTTGA+AGG + chr1_1:79645445-79645464 None:intergenic 35.0%
!! AACATCAAGAAGCTGTTTTC+AGG + chr1_1:79645464-79645483 None:intergenic 35.0%
AAAACAGCTTCTTGATGTTC+AGG - chr1_1:79645465-79645484 Msa0047070:intron 35.0%
CTTACAACAAAAGCTATGTC+TGG - chr1_1:79645519-79645538 Msa0047070:intron 35.0%
GAAATATGGTAGATAAAGGG+AGG + chr1_1:79645577-79645596 None:intergenic 35.0%
ATCTTGCAAACTCAATTCCA+AGG - chr1_1:79645726-79645745 Msa0047070:intron 35.0%
CTTGGAGCTTAAAAGCTTAA+GGG + chr1_1:79645804-79645823 None:intergenic 35.0%
ATTAACAGGTGATGATAGCT+TGG + chr1_1:79645822-79645841 None:intergenic 35.0%
GTGGATGACATCATATTAAC+AGG + chr1_1:79645836-79645855 None:intergenic 35.0%
CCTGGATTTGAGGAAAAATT+GGG + chr1_1:79646037-79646056 None:intergenic 35.0%
! CCAATTTTTCCTCAAATCCA+GGG - chr1_1:79646035-79646054 Msa0047070:intron 35.0%
! CAATTTTTCCTCAAATCCAG+GGG - chr1_1:79646036-79646055 Msa0047070:intron 35.0%
! AATTTTTCCTCAAATCCAGG+GGG - chr1_1:79646037-79646056 Msa0047070:intron 35.0%
! TTTTCTAAATGGAGAGCTAG+AGG + chr1_1:79646083-79646102 None:intergenic 35.0%
! ATAGAGTTGAGTTTTGCAAC+TGG - chr1_1:79646169-79646188 Msa0047070:intron 35.0%
AAGGGATTTACCCAAACTTA+TGG + chr1_1:79646220-79646239 None:intergenic 35.0%
TAGGACTACTAATTTCCAGT+TGG - chr1_1:79646387-79646406 Msa0047070:intron 35.0%
AGGACTACTAATTTCCAGTT+GGG - chr1_1:79646388-79646407 Msa0047070:intron 35.0%
!! GTTTTGGTAGGAGACATAAT+TGG - chr1_1:79646492-79646511 Msa0047070:intron 35.0%
GTAGGAGACATAATTGGAAA+TGG - chr1_1:79646498-79646517 Msa0047070:intron 35.0%
!!! GTTTTTTTCCTAACGGCTAT+GGG - chr1_1:79646565-79646584 Msa0047070:intron 35.0%
ATCTTTGTTGAACCATCATC+CGG - chr1_1:79646640-79646659 Msa0047070:intron 35.0%
TTGATTGGATGCTGAAATGA+TGG - chr1_1:79646672-79646691 Msa0047070:intron 35.0%
GTGGTATTTCCTTTCCTATT+TGG - chr1_1:79646755-79646774 Msa0047070:intron 35.0%
AGGTTTCCCTTATCAATTTC+AGG - chr1_1:79646799-79646818 Msa0047070:intron 35.0%
ATCACAAAAATTCCCTTCAG+GGG + chr1_1:79646963-79646982 None:intergenic 35.0%
CTATCACAAAAATTCCCTTC+AGG + chr1_1:79646965-79646984 None:intergenic 35.0%
ACATGAACCTTCTTTGTGTT+AGG - chr1_1:79647021-79647040 Msa0047070:intron 35.0%
! TCTAGTTTAGAACGAGAGTT+AGG - chr1_1:79647111-79647130 Msa0047070:intron 35.0%
! CTAGTTTAGAACGAGAGTTA+GGG - chr1_1:79647112-79647131 Msa0047070:intron 35.0%
! TAGTTTAGAACGAGAGTTAG+GGG - chr1_1:79647113-79647132 Msa0047070:intron 35.0%
! TAAATTTTTATGGGGGGATG+CGG + chr1_1:79647288-79647307 None:intergenic 35.0%
! CATTTTGTTGAGGCGTATTT+GGG - chr1_1:79647378-79647397 Msa0047070:intron 35.0%
TATGTTGAAAAAACTCTCCG+AGG - chr1_1:79647426-79647445 Msa0047070:intron 35.0%
! ACCATTGTCACTTCTCAAAA+TGG - chr1_1:79647469-79647488 Msa0047070:intron 35.0%
!! TCCATTTTGAGAAGTGACAA+TGG + chr1_1:79647473-79647492 None:intergenic 35.0%
ATGTTGGGTCTATCTTATGA+AGG + chr1_1:79647567-79647586 None:intergenic 35.0%
CCTTTATTGACGATCATACA+CGG + chr1_1:79647592-79647611 None:intergenic 35.0%
AAAGGTTTGGATGCATGATA+AGG - chr1_1:79647683-79647702 Msa0047070:CDS 35.0%
TGCTCTGGTATAATAGACTA+GGG + chr1_1:79647832-79647851 None:intergenic 35.0%
ATGCTCTGGTATAATAGACT+AGG + chr1_1:79647833-79647852 None:intergenic 35.0%
TTAGGGATCAAATAATGCTC+TGG + chr1_1:79647847-79647866 None:intergenic 35.0%
CATTATTTGATCCCTAACAG+AGG - chr1_1:79647850-79647869 Msa0047070:intron 35.0%
TTTGAGAATAAAGTGGCTCA+TGG + chr1_1:79647896-79647915 None:intergenic 35.0%
!! GGGTGTTTTTGAGAATAAAG+TGG + chr1_1:79647903-79647922 None:intergenic 35.0%
! GATGGACTCTATTACTTTGA+GGG + chr1_1:79647923-79647942 None:intergenic 35.0%
!!! TATTTTTCAGGACCGGAATT+CGG + chr1_1:79647975-79647994 None:intergenic 35.0%
!!! CTCATTGTATTTTTCAGGAC+CGG + chr1_1:79647982-79648001 None:intergenic 35.0%
! ATTTTTCCTTCTCCTGCAAT+TGG - chr1_1:79648121-79648140 Msa0047070:intron 35.0%
TGGTATTCCTAATGCTTCTT+TGG + chr1_1:79648323-79648342 None:intergenic 35.0%
ACATCTGAAAAATGGCAAAC+CGG + chr1_1:79648446-79648465 None:intergenic 35.0%
AAACCAGCACATCTGAAAAA+TGG + chr1_1:79648454-79648473 None:intergenic 35.0%
GAAAACATTTCTCCTAGTGA+AGG - chr1_1:79648676-79648695 Msa0047070:CDS 35.0%
! AGAATTTTCCAGTTTCTTGC+CGG + chr1_1:79648757-79648776 None:intergenic 35.0%
ATCTCTTCAACACCTATAAG+TGG + chr1_1:79648828-79648847 None:intergenic 35.0%
! TTCTTGCCAAATCCGTTTTA+AGG - chr1_1:79648852-79648871 Msa0047070:intron 35.0%
CATTGAAGGCTAGAGAAATT+CGG + chr1_1:79648912-79648931 None:intergenic 35.0%
GAAAGAAATGTACTCTGATC+TGG + chr1_1:79648962-79648981 None:intergenic 35.0%
TTCCACAGCAAAAGAATTGT+GGG + chr1_1:79648992-79649011 None:intergenic 35.0%
ATTCCACAGCAAAAGAATTG+TGG + chr1_1:79648993-79649012 None:intergenic 35.0%
! AAAACTCCATGGTAATGACA+TGG + chr1_1:79649062-79649081 None:intergenic 35.0%
!! GGAAAAATGGGTTATCTTAC+TGG + chr1_1:79649138-79649157 None:intergenic 35.0%
!! AACCCATTTTTCCTTTGCTA+CGG - chr1_1:79649145-79649164 Msa0047070:intron 35.0%
ATCCGTAGCAAAGGAAAAAT+GGG + chr1_1:79649150-79649169 None:intergenic 35.0%
TATCCGTAGCAAAGGAAAAA+TGG + chr1_1:79649151-79649170 None:intergenic 35.0%
! TCAATGGGTCGAACTATTTT+AGG + chr1_1:79649197-79649216 None:intergenic 35.0%
! AAGAGGTGATTTGGATAGAA+TGG - chr1_1:79649223-79649242 Msa0047070:intron 35.0%
! AGAGGTGATTTGGATAGAAT+GGG - chr1_1:79649224-79649243 Msa0047070:intron 35.0%
! TCCTCTCATTCTTTTCTACT+TGG + chr1_1:79644692-79644711 None:intergenic 35.0%
CAGAGATCCTACATAATTAC+AGG - chr1_1:79644790-79644809 Msa0047070:intron 35.0%
TGATTCTGCGACATCATATA+TGG - chr1_1:79649591-79649610 Msa0047070:intron 35.0%
GCTTTGACAAATATTGGATG+TGG - chr1_1:79649644-79649663 Msa0047070:intron 35.0%
!! GATAATTTCGCACCACTTTT+TGG + chr1_1:79649734-79649753 None:intergenic 35.0%
GGTTAATAGCGATTATTTGC+TGG - chr1_1:79649760-79649779 Msa0047070:CDS 35.0%
!! GCATTTTGGTCACACTAAAA+AGG + chr1_1:79649872-79649891 None:intergenic 35.0%
! AGTATAAGCCTGACTTTTGA+GGG + chr1_1:79650418-79650437 None:intergenic 35.0%
! TAGTATAAGCCTGACTTTTG+AGG + chr1_1:79650419-79650438 None:intergenic 35.0%
AGCAAGTGATGAATTACAAC+AGG + chr1_1:79650511-79650530 None:intergenic 35.0%
TGTTGTAATTCATCACTTGC+TGG - chr1_1:79650510-79650529 Msa0047070:intron 35.0%
TACACAGATATCCTAGAAGA+TGG - chr1_1:79650589-79650608 Msa0047070:intron 35.0%
! TGTTTAGAAAAGCATGGTGA+AGG + chr1_1:79650767-79650786 None:intergenic 35.0%
! GAACAATGTCATGTGCATTT+TGG + chr1_1:79650807-79650826 None:intergenic 35.0%
! TGATATAGTCTTAGTCCCAA+GGG + chr1_1:79650988-79651007 None:intergenic 35.0%
! ATGATATAGTCTTAGTCCCA+AGG + chr1_1:79650989-79651008 None:intergenic 35.0%
TGTAAGCATCTTGCACTAAA+AGG + chr1_1:79651047-79651066 None:intergenic 35.0%
GCACAAGTTTCCTTTGTATT+GGG - chr1_1:79651176-79651195 Msa0047070:CDS 35.0%
! TTTTGTTCCCGTAAGTTGTA+AGG - chr1_1:79651281-79651300 Msa0047070:intron 35.0%
ATCAAGTCCTTACAACTTAC+GGG + chr1_1:79651291-79651310 None:intergenic 35.0%
GCATTTGCATGTTGTTATGT+AGG - chr1_1:79651404-79651423 Msa0047070:intron 35.0%
! TTAATCCTTTTCCTAGGTGA+AGG + chr1_1:79651680-79651699 None:intergenic 35.0%
ACCTAGGAAAAGGATTAAGA+AGG - chr1_1:79651682-79651701 Msa0047070:intron 35.0%
! TCCTTCTTAATCCTTTTCCT+AGG + chr1_1:79651686-79651705 None:intergenic 35.0%
TTATATCAGTCCCTTCCATT+GGG + chr1_1:79651721-79651740 None:intergenic 35.0%
TTTACTTGGGAAGGTGATTA+CGG - chr1_1:79651880-79651899 Msa0047070:intron 35.0%
TGGTTGAATTCAGTTCATCT+CGG + chr1_1:79651943-79651962 None:intergenic 35.0%
!! CATATCTCCAAGAGTATCAT+TGG + chr1_1:79651984-79652003 None:intergenic 35.0%
GAAGGTAAATAAGAGATTGG+AGG - chr1_1:79652018-79652037 Msa0047070:intron 35.0%
!! AAATAACGAGGTTTTTGAGG+AGG - chr1_1:79652081-79652100 Msa0047070:intron 35.0%
! GAAAAGTATAGATACGCTCA+AGG - chr1_1:79652183-79652202 Msa0047070:intron 35.0%
AAAGTATAGATACGCTCAAG+GGG - chr1_1:79652185-79652204 Msa0047070:intron 35.0%
CAAAGTATAGATACGCTCAA+GGG - chr1_1:79652373-79652392 Msa0047070:CDS 35.0%
AAAGTATAGATACGCTCAAG+GGG - chr1_1:79652185-79652204 Msa0047070:intron 35.0%
!! AAAACCATCTTGATAGCGAA+AGG + chr1_1:79652449-79652468 None:intergenic 35.0%
! TAGGATGTGAACTTGTTCTA+TGG + chr1_1:79652479-79652498 None:intergenic 35.0%
!!! CTACGTTTTTAGTTTGGGGT+GGG + chr1_1:79635504-79635523 None:intergenic 40.0%
!!! TCTACGTTTTTAGTTTGGGG+TGG + chr1_1:79635505-79635524 None:intergenic 40.0%
ATATGATCGACGTGGTTTGA+AGG + chr1_1:79635692-79635711 None:intergenic 40.0%
! CGTTTAGAATATGATCGACG+TGG + chr1_1:79635700-79635719 None:intergenic 40.0%
TTCGATGTCTATTCGAGCTT+CGG - chr1_1:79636046-79636065 Msa0047070:CDS 40.0%
TTGATGTGGCAACGAATCAT+TGG + chr1_1:79636149-79636168 None:intergenic 40.0%
ATGTCACGGCAACAAATCAT+TGG + chr1_1:79636216-79636235 None:intergenic 40.0%
!! ATGATTTGTTGCCGTGACAT+TGG - chr1_1:79636216-79636235 Msa0047070:CDS 40.0%
TTGCTTATAATAGTGACCGG+AGG - chr1_1:79636384-79636403 Msa0047070:CDS 40.0%
GGCAAAACCTGTACTAAACA+AGG - chr1_1:79636555-79636574 Msa0047070:CDS 40.0%
! TGACCATCCTTGTTTAGTAC+AGG + chr1_1:79636565-79636584 None:intergenic 40.0%
!! GCAGACTCACTTTTGAAAGA+AGG + chr1_1:79636611-79636630 None:intergenic 40.0%
TAGGTGAAGTTGACAATTGC+TGG - chr1_1:79636796-79636815 Msa0047070:intron 40.0%
AGGTGAAGTTGACAATTGCT+GGG - chr1_1:79636797-79636816 Msa0047070:intron 40.0%
GAAAAATACCGTGAAGGAAG+AGG - chr1_1:79636819-79636838 Msa0047070:intron 40.0%
CTCAAAATCCTCTTCCTTCA+CGG + chr1_1:79636830-79636849 None:intergenic 40.0%
AGTGTTATCCGTGGTAAATC+CGG - chr1_1:79636943-79636962 Msa0047070:intron 40.0%
TATTTGTCGGTCTTCAGACA+GGG - chr1_1:79636986-79637005 Msa0047070:intron 40.0%
AAGCAGAACAATCCTCAATC+GGG + chr1_1:79637118-79637137 None:intergenic 40.0%
CAAGCAGAACAATCCTCAAT+CGG + chr1_1:79637119-79637138 None:intergenic 40.0%
! TTTGCTGGTTGTGTCTTTGA+TGG - chr1_1:79637153-79637172 Msa0047070:intron 40.0%
!! CTTTGATGGTGATACACTTG+TGG - chr1_1:79637167-79637186 Msa0047070:intron 40.0%
TGGCTCACAAGACATTTCAT+AGG - chr1_1:79637187-79637206 Msa0047070:intron 40.0%
GTCATGACAAGATACGTCAA+TGG - chr1_1:79637746-79637765 Msa0047070:intron 40.0%
!! TACGTCAATGGTGTTGCAAT+AGG - chr1_1:79637758-79637777 Msa0047070:intron 40.0%
CTGCCTTGGAAAAAAAACCT+GGG + chr1_1:79638040-79638059 None:intergenic 40.0%
ACTGCCTTGGAAAAAAAACC+TGG + chr1_1:79638041-79638060 None:intergenic 40.0%
TGATATAGCTCATACTGCCT+TGG + chr1_1:79638054-79638073 None:intergenic 40.0%
CAGTCATCTAAAGATGCTTC+TGG - chr1_1:79638233-79638252 Msa0047070:intron 40.0%
TGCTTCACTTTGTCTTCACA+AGG - chr1_1:79638277-79638296 Msa0047070:intron 40.0%
GGCTAATTTATTGCGCTTCA+TGG - chr1_1:79638421-79638440 Msa0047070:intron 40.0%
TAAGCAGCCTGTACTTTAAG+AGG + chr1_1:79638675-79638694 None:intergenic 40.0%
TTCGTGATCTACTTACTGCT+TGG - chr1_1:79638968-79638987 Msa0047070:intron 40.0%
!! CATTGTGGATTGGTGAAACA+TGG + chr1_1:79639075-79639094 None:intergenic 40.0%
ATATTGCTATGAATGTCCGC+AGG - chr1_1:79639103-79639122 Msa0047070:intron 40.0%
AGGGAAGCAAAACGTGTATA+TGG - chr1_1:79639135-79639154 Msa0047070:intron 40.0%
CATAGGATACTAGTGTCAAC+TGG + chr1_1:79639161-79639180 None:intergenic 40.0%
TTCTTTCTCGTCTGCTTCAT+AGG + chr1_1:79639178-79639197 None:intergenic 40.0%
CAACTCAACTCCTTTACATC+AGG - chr1_1:79639371-79639390 Msa0047070:intron 40.0%
! ACAATCTGGTGATGCTGTAA+AGG - chr1_1:79639398-79639417 Msa0047070:intron 40.0%
! TGGTGATGCTGTAAAGGTTA+TGG - chr1_1:79639404-79639423 Msa0047070:intron 40.0%
TGTAAAGGTTATGGAGCTCT+TGG - chr1_1:79639413-79639432 Msa0047070:intron 40.0%
CCCCTATCATCTTTAATGCA+TGG + chr1_1:79639453-79639472 None:intergenic 40.0%
!!! GTTTTCTTGATTTGCTTGCC+AGG + chr1_1:79639498-79639517 None:intergenic 40.0%
AGAATCACAAGCTGCTATGA+AGG - chr1_1:79639602-79639621 Msa0047070:intron 40.0%
! TTGGTAGTAAAAGGGAGACT+AGG - chr1_1:79639742-79639761 Msa0047070:intron 40.0%
TGGTAGTAAAAGGGAGACTA+GGG - chr1_1:79639743-79639762 Msa0047070:intron 40.0%
!!! GCTTTTTTTTCTGCCTGTAC+AGG + chr1_1:79639902-79639921 None:intergenic 40.0%
!!! GCACCTCATGTTAGTTTTCT+AGG - chr1_1:79640022-79640041 Msa0047070:intron 40.0%
! TCTTTAGAAATCGTGGCCAA+TGG - chr1_1:79640206-79640225 Msa0047070:intron 40.0%
! TTTGAAGTTCTAGCCCTGTA+GGG + chr1_1:79640235-79640254 None:intergenic 40.0%
!!! TTTTGAAGTTCTAGCCCTGT+AGG + chr1_1:79640236-79640255 None:intergenic 40.0%
! TTGTATGTGTCTAGGGCAAA+TGG - chr1_1:79640522-79640541 Msa0047070:intron 40.0%
! ATAACGCCACAATGTTTTCG+GGG - chr1_1:79641030-79641049 Msa0047070:intron 40.0%
! GTAATGTTTGGAGCGAAAGA+TGG + chr1_1:79641123-79641142 None:intergenic 40.0%
!! CTAGAAATATTGACTTGCGG+GGG - chr1_1:79641366-79641385 Msa0047070:intron 40.0%
!! AGATCGTGAGTTTTTCGATC+TGG - chr1_1:79641922-79641941 Msa0047070:intron 40.0%
!! TCTGGCTCTGTGATTTAGTA+TGG - chr1_1:79642028-79642047 Msa0047070:intron 40.0%
! TGATGTTGCTTCAAATGGCT+AGG - chr1_1:79642151-79642170 Msa0047070:intron 40.0%
! CTGTGGATTTGGTTCGTAAT+TGG - chr1_1:79642335-79642354 Msa0047070:intron 40.0%
!!! ATTGGTTGTTTTGGCTCGAA+AGG - chr1_1:79642353-79642372 Msa0047070:intron 40.0%
!!! TTGGTTGTTTTGGCTCGAAA+GGG - chr1_1:79642354-79642373 Msa0047070:intron 40.0%
TTGAGTCCTTTCTATGTTGG+CGG - chr1_1:79642422-79642441 Msa0047070:intron 40.0%
! TTGTGGATTGTTTGTGGTAG+TGG - chr1_1:79642525-79642544 Msa0047070:intron 40.0%
!! GTTTGTGGTAGTGGTTGTTT+AGG - chr1_1:79642534-79642553 Msa0047070:intron 40.0%
AAGTACAAGACTAAGGAGCA+AGG + chr1_1:79642629-79642648 None:intergenic 40.0%
! GAGAAGGAAGTACAAGACTA+AGG + chr1_1:79642636-79642655 None:intergenic 40.0%
AAAGTAACTCAAGCGCATAG+AGG - chr1_1:79642911-79642930 Msa0047070:intron 40.0%
!!! TTATTTTCTGGTTGTGTCCG+AGG + chr1_1:79643646-79643665 None:intergenic 40.0%
!!! TTGTCCAAAGTTTTTTGGCG+AGG - chr1_1:79643997-79644016 Msa0047070:intron 40.0%
AATGTACAAGTGGCACTACA+AGG + chr1_1:79644360-79644379 None:intergenic 40.0%
TATAATCGGAAGAGTAGTGG+GGG - chr1_1:79644623-79644642 Msa0047070:intron 40.0%
!! ACATTTTCAAGCCAGCTTGA+GGG + chr1_1:79644915-79644934 None:intergenic 40.0%
TGGCTTGAAAATGTCTTCCA+TGG - chr1_1:79644921-79644940 Msa0047070:intron 40.0%
TTGGCAGATATCTTGACCAA+AGG + chr1_1:79644988-79645007 None:intergenic 40.0%
ATCTGCCAATTGTTCTGTAG+TGG - chr1_1:79644999-79645018 Msa0047070:intron 40.0%
TCTGCCAATTGTTCTGTAGT+GGG - chr1_1:79645000-79645019 Msa0047070:intron 40.0%
! TGAAGCTGAATTTAGAGCAG+TGG + chr1_1:79645238-79645257 None:intergenic 40.0%
! TACTTTTGTAGGGGGAAACT+TGG + chr1_1:79645307-79645326 None:intergenic 40.0%
ACTGATCGAAGATCAACATC+AGG + chr1_1:79645336-79645355 None:intergenic 40.0%
ATCCTACACAGATGCAGATT+GGG + chr1_1:79645370-79645389 None:intergenic 40.0%
AATCCTACACAGATGCAGAT+TGG + chr1_1:79645371-79645390 None:intergenic 40.0%
CATCTGTGTAGGATTCTACT+TGG - chr1_1:79645376-79645395 Msa0047070:intron 40.0%
TTATAAAGAAGTCCCTTCCC+GGG - chr1_1:79645414-79645433 Msa0047070:intron 40.0%
!! ACCATATTTCTAGCTTCAGC+AGG - chr1_1:79645587-79645606 Msa0047070:intron 40.0%
! AGCAGGCTGCAATTTTATGT+TGG - chr1_1:79645604-79645623 Msa0047070:intron 40.0%
GAGTTTGCAAGATCAAAGGA+GGG + chr1_1:79645719-79645738 None:intergenic 40.0%
TGAGTTTGCAAGATCAAAGG+AGG + chr1_1:79645720-79645739 None:intergenic 40.0%
!! GGTCCTCTAAAATACTTCCT+TGG + chr1_1:79645746-79645765 None:intergenic 40.0%
!! CTTAAGGGAGAAACTTGCTA+AGG + chr1_1:79645789-79645808 None:intergenic 40.0%
GCTTGGAGCTTAAAAGCTTA+AGG + chr1_1:79645805-79645824 None:intergenic 40.0%
GTGTATGATCAGCTTGACTT+TGG - chr1_1:79645906-79645925 Msa0047070:intron 40.0%
! AGGTTTGGAACTGTGGTAAA+AGG + chr1_1:79645944-79645963 None:intergenic 40.0%
! CCCAATTTTTCCTCAAATCC+AGG - chr1_1:79646034-79646053 Msa0047070:intron 40.0%
CCCTGGATTTGAGGAAAAAT+TGG + chr1_1:79646038-79646057 None:intergenic 40.0%
ATGTAAAGGCCAGTTCAAGT+TGG - chr1_1:79646123-79646142 Msa0047070:intron 40.0%
AAGGCTAGGTTAGTAGCTAA+GGG + chr1_1:79646238-79646257 None:intergenic 40.0%
!! AAAGAAGGTGGGTTGTAAGT+GGG + chr1_1:79646305-79646324 None:intergenic 40.0%
!! AAAAGAAGGTGGGTTGTAAG+TGG + chr1_1:79646306-79646325 None:intergenic 40.0%
CCACATGACAAAAAGAAGGT+GGG + chr1_1:79646316-79646335 None:intergenic 40.0%
ACCACATGACAAAAAGAAGG+TGG + chr1_1:79646317-79646336 None:intergenic 40.0%
CCTACCACATGACAAAAAGA+AGG + chr1_1:79646320-79646339 None:intergenic 40.0%
! CCTTCTTTTTGTCATGTGGT+AGG - chr1_1:79646317-79646336 Msa0047070:intron 40.0%
!! TGAGAGCATTAAGCTCATCT+AGG - chr1_1:79646368-79646387 Msa0047070:intron 40.0%
AGTGCTTCCTCAATGTTTCT+AGG - chr1_1:79646418-79646437 Msa0047070:intron 40.0%
GTTTGTGCCTAGAAACATTG+AGG + chr1_1:79646428-79646447 None:intergenic 40.0%
!! AAGTAAAGGCTCGGTAGTTT+TGG - chr1_1:79646464-79646483 Msa0047070:intron 40.0%
!! AGTAAAGGCTCGGTAGTTTT+GGG - chr1_1:79646465-79646484 Msa0047070:intron 40.0%
! GGAAATGGGATAGTTTGTAC+TGG - chr1_1:79646513-79646532 Msa0047070:intron 40.0%
! TGATTTCTTGGTGCAAGTTC+TGG - chr1_1:79646543-79646562 Msa0047070:intron 40.0%
!!! GGTTTTTTTCCTAACGGCTA+TGG - chr1_1:79646564-79646583 Msa0047070:intron 40.0%
AAGATGCCTCAAGAACAAAC+AGG + chr1_1:79646625-79646644 None:intergenic 40.0%
TCTTTGTTGAACCATCATCC+GGG - chr1_1:79646641-79646660 Msa0047070:intron 40.0%
ATCCAATCAACTAGAAACCC+CGG + chr1_1:79646662-79646681 None:intergenic 40.0%
TGCTCGGAAATATCCTCAAA+AGG + chr1_1:79646710-79646729 None:intergenic 40.0%
AAGAGCTTCGTGTTTATGCT+CGG + chr1_1:79646726-79646745 None:intergenic 40.0%
!!! CGAAGCTCTTGTTTTGATTG+TGG - chr1_1:79646736-79646755 Msa0047070:intron 40.0%
TCACAAAAATTCCCTTCAGG+GGG + chr1_1:79646962-79646981 None:intergenic 40.0%
! TGTAACACTTGTACCCCTTT+TGG - chr1_1:79647046-79647065 Msa0047070:intron 40.0%
GTTATTCTCCCAACCAAAAG+GGG + chr1_1:79647062-79647081 None:intergenic 40.0%
GGTTATTCTCCCAACCAAAA+GGG + chr1_1:79647063-79647082 None:intergenic 40.0%
TGGTTATTCTCCCAACCAAA+AGG + chr1_1:79647064-79647083 None:intergenic 40.0%
TGTTAAGTTATCGCACCCAT+TGG + chr1_1:79647223-79647242 None:intergenic 40.0%
CGATAACTTAACACACGAGT+GGG - chr1_1:79647230-79647249 Msa0047070:intron 40.0%
GCATCCCCCCATAAAAATTT+AGG - chr1_1:79647287-79647306 Msa0047070:intron 40.0%
!!! TCAGCTATGCCATTTTGTTG+AGG - chr1_1:79647368-79647387 Msa0047070:intron 40.0%
CCAAATACGCCTCAACAAAA+TGG + chr1_1:79647380-79647399 None:intergenic 40.0%
! CCATTTTGTTGAGGCGTATT+TGG - chr1_1:79647377-79647396 Msa0047070:intron 40.0%
CCGTGTATGATCGTCAATAA+AGG - chr1_1:79647589-79647608 Msa0047070:CDS 40.0%
CAACTCAATTTGGGAAAAGG+TGG + chr1_1:79647622-79647641 None:intergenic 40.0%
TGATAAGGTCGAGAGGAATA+AGG - chr1_1:79647698-79647717 Msa0047070:intron 40.0%
TATCAGTTCTGCCTCTGTTA+GGG + chr1_1:79647864-79647883 None:intergenic 40.0%
! GGATGGACTCTATTACTTTG+AGG + chr1_1:79647924-79647943 None:intergenic 40.0%
GATTGGCAGTGCTAAAATGA+TGG + chr1_1:79647945-79647964 None:intergenic 40.0%
!!! ATTTTTCAGGACCGGAATTC+GGG + chr1_1:79647974-79647993 None:intergenic 40.0%
! TTTTCACCAATTGCAGGAGA+AGG + chr1_1:79648130-79648149 None:intergenic 40.0%
! GGAAGTTTTTCACCAATTGC+AGG + chr1_1:79648136-79648155 None:intergenic 40.0%
CAATCATATTCACCTTGTCC+TGG + chr1_1:79648184-79648203 None:intergenic 40.0%
AGGTGCAACTTAGAGAAGTA+GGG - chr1_1:79648275-79648294 Msa0047070:intron 40.0%
AATGCTTCTTTGGCACAAAC+AGG + chr1_1:79648313-79648332 None:intergenic 40.0%
!! GTTTGTGCCAAAGAAGCATT+AGG - chr1_1:79648313-79648332 Msa0047070:intron 40.0%
!! ATCAAGTTGAGGAGCTCATA+AGG + chr1_1:79648369-79648388 None:intergenic 40.0%
TAAAAAATCCTTGCCCAACC+AGG + chr1_1:79648392-79648411 None:intergenic 40.0%
CATCTGAAAAATGGCAAACC+GGG + chr1_1:79648445-79648464 None:intergenic 40.0%
!!! TTGCCATTTTTCAGATGTGC+TGG - chr1_1:79648448-79648467 Msa0047070:CDS 40.0%
!!! GTTTTCTGAAGTTAGAAGGG+AGG + chr1_1:79648662-79648681 None:intergenic 40.0%
CATTTCTCCTAGTGAAGGTA+AGG - chr1_1:79648681-79648700 Msa0047070:CDS 40.0%
AGATCAACCTTACCTTCACT+AGG + chr1_1:79648691-79648710 None:intergenic 40.0%
AGTTAGATGAAGTTCGTGGA+AGG + chr1_1:79648723-79648742 None:intergenic 40.0%
ATCTAACTCCTCATTGAGAC+CGG - chr1_1:79648735-79648754 Msa0047070:CDS 40.0%
CATCAACAAACAGTGGAAGA+AGG + chr1_1:79648781-79648800 None:intergenic 40.0%
! CTTCTTCCACTGTTTGTTGA+TGG - chr1_1:79648779-79648798 Msa0047070:CDS 40.0%
GAAACACCATCAACAAACAG+TGG + chr1_1:79648788-79648807 None:intergenic 40.0%
!! TTGATGGTGTTTCTCATCGT+CGG - chr1_1:79648795-79648814 Msa0047070:CDS 40.0%
GTCGGTTGAATTCCACTTAT+AGG - chr1_1:79648813-79648832 Msa0047070:CDS 40.0%
! TTCCCACAATTCTTTTGCTG+TGG - chr1_1:79648987-79649006 Msa0047070:CDS 40.0%
TACCAACCATGTCATTACCA+TGG - chr1_1:79649053-79649072 Msa0047070:CDS 40.0%
CAGATGTATATCCGTAGCAA+AGG + chr1_1:79649159-79649178 None:intergenic 40.0%
CTTTGCTACGGATATACATC+TGG - chr1_1:79649157-79649176 Msa0047070:intron 40.0%
!! ATGGGTCGAACTATTTTAGG+TGG + chr1_1:79649194-79649213 None:intergenic 40.0%
! TCACCTCTTTTCGACTCAAT+GGG + chr1_1:79649212-79649231 None:intergenic 40.0%
! ATCACCTCTTTTCGACTCAA+TGG + chr1_1:79649213-79649232 None:intergenic 40.0%
TGAGTCGAAAAGAGGTGATT+TGG - chr1_1:79649214-79649233 Msa0047070:intron 40.0%
AATGAGCAGAAGGTTGCTTA+TGG + chr1_1:79649258-79649277 None:intergenic 40.0%
!! GCAACCTTCTGCTCATTTTT+AGG - chr1_1:79649261-79649280 Msa0047070:intron 40.0%
TTCCTCAGTCAATAGTGAAG+AGG + chr1_1:79649313-79649332 None:intergenic 40.0%
GCCAAGTAGAAAAGAATGAG+AGG - chr1_1:79649384-79649403 Msa0047070:intron 40.0%
GGACAATCTCAACCAAAAAG+TGG - chr1_1:79649719-79649738 Msa0047070:intron 40.0%
TGGTGCGAAATTATCGAAAG+AGG - chr1_1:79649739-79649758 Msa0047070:CDS 40.0%
TGAAAGGCTATTAGCTGAAG+TGG + chr1_1:79650445-79650464 None:intergenic 40.0%
TTCAGCTAATAGCCTTTCAG+AGG - chr1_1:79650446-79650465 Msa0047070:intron 40.0%
GCCAATGAATGTGGTTTAGT+CGG - chr1_1:79650468-79650487 Msa0047070:intron 40.0%
CCAATGAATGTGGTTTAGTC+GGG - chr1_1:79650469-79650488 Msa0047070:intron 40.0%
CAATGAATGTGGTTTAGTCG+GGG - chr1_1:79650470-79650489 Msa0047070:intron 40.0%
CTGGTAAAGTTTCTTTCCAC+CGG - chr1_1:79650529-79650548 Msa0047070:intron 40.0%
TCTGTGTATATGCATGCATG+AGG + chr1_1:79650577-79650596 None:intergenic 40.0%
CAGATATCCTAGAAGATGGA+TGG - chr1_1:79650593-79650612 Msa0047070:intron 40.0%
TACATTGCCATCCATCTTCT+AGG + chr1_1:79650603-79650622 None:intergenic 40.0%
TCAAAAACTGAAACGGTGGA+AGG - chr1_1:79650712-79650731 Msa0047070:intron 40.0%
CACATGACATTGTTCCTGAA+TGG - chr1_1:79650812-79650831 Msa0047070:intron 40.0%
TCCTCAGATCTGGATCTTAT+CGG + chr1_1:79650898-79650917 None:intergenic 40.0%
TACAAAATCAGCGAGCACTT+AGG - chr1_1:79650950-79650969 Msa0047070:CDS 40.0%
! TAGGATTTTATGCTTCCCCT+TGG - chr1_1:79650969-79650988 Msa0047070:intron 40.0%
! AGGATTTTATGCTTCCCCTT+GGG - chr1_1:79650970-79650989 Msa0047070:intron 40.0%
! GATATAGTCTTAGTCCCAAG+GGG + chr1_1:79650987-79651006 None:intergenic 40.0%
TCTTGCACTAAAAGGCAGAA+CGG + chr1_1:79651039-79651058 None:intergenic 40.0%
TTTATAGGGTGAAACTGGTG+GGG + chr1_1:79651080-79651099 None:intergenic 40.0%
CTTTATAGGGTGAAACTGGT+GGG + chr1_1:79651081-79651100 None:intergenic 40.0%
TCTTTATAGGGTGAAACTGG+TGG + chr1_1:79651082-79651101 None:intergenic 40.0%
GGCACAAGTTTCCTTTGTAT+TGG - chr1_1:79651175-79651194 Msa0047070:CDS 40.0%
AGTTTCCTTTGTATTGGGAG+AGG - chr1_1:79651181-79651200 Msa0047070:CDS 40.0%
GTTTCCTTTGTATTGGGAGA+GGG - chr1_1:79651182-79651201 Msa0047070:CDS 40.0%
! GAATTTTGCTGCATGTCTCT+CGG + chr1_1:79651253-79651272 None:intergenic 40.0%
TTGAACTCGGCTTCATTTAG+AGG + chr1_1:79651440-79651459 None:intergenic 40.0%
TGCCAAATAGGTCTTGAACT+CGG + chr1_1:79651453-79651472 None:intergenic 40.0%
GTTCAAGACCTATTTGGCAA+AGG - chr1_1:79651454-79651473 Msa0047070:intron 40.0%
! TTCTCTAGCCTTTGCCAAAT+AGG + chr1_1:79651465-79651484 None:intergenic 40.0%
! AGAGCCTCAGTTTTGCAATT+TGG - chr1_1:79651488-79651507 Msa0047070:intron 40.0%
AGCACCAAATTGCAAAACTG+AGG + chr1_1:79651495-79651514 None:intergenic 40.0%
GAAGCAAAATTGGACGTTAG+TGG - chr1_1:79651518-79651537 Msa0047070:intron 40.0%
TTCAAAGGTGGTACAGCAAT+AGG + chr1_1:79651620-79651639 None:intergenic 40.0%
TTCTTCCTTCACCTAGGAAA+AGG - chr1_1:79651672-79651691 Msa0047070:intron 40.0%
GTTATATCAGTCCCTTCCAT+TGG + chr1_1:79651722-79651741 None:intergenic 40.0%
GACTGATATAACATCGCTGT+GGG - chr1_1:79651730-79651749 Msa0047070:intron 40.0%
!! GTTTGATGGAATGGGTTTTG+TGG - chr1_1:79651760-79651779 Msa0047070:intron 40.0%
TGCGAAGGATATGGAAATTG+AGG - chr1_1:79652153-79652172 Msa0047070:intron 40.0%
TGCGAAGGATATGGAAATTG+AGG - chr1_1:79652153-79652172 Msa0047070:intron 40.0%
TGCGAAGGATATGGAAATTG+AGG - chr1_1:79652153-79652172 Msa0047070:intron 40.0%
AAAGCGTAGATATGCTCAAG+AGG - chr1_1:79652311-79652330 Msa0047070:CDS 40.0%
GCAATCCGCAACAAAAGATA+TGG - chr1_1:79652333-79652352 Msa0047070:CDS 40.0%
GCAAAGTATAGATACGCTCA+AGG - chr1_1:79652372-79652391 Msa0047070:CDS 40.0%
AATTTCCATATCCTTCGCTG+CGG + chr1_1:79652404-79652423 None:intergenic 40.0%
AGCGAAGGATATGGAAATTG+AGG - chr1_1:79652405-79652424 Msa0047070:CDS 40.0%
CAATGGTCGAAGAAGTTTGG+TGG + chr1_1:79635629-79635648 None:intergenic 45.0%
CGACAATGGTCGAAGAAGTT+TGG + chr1_1:79635632-79635651 None:intergenic 45.0%
TGAAGGTGGTTGAAGGGTTT+CGG + chr1_1:79635675-79635694 None:intergenic 45.0%
GTGGTTTGAAGGTGGTTGAA+GGG + chr1_1:79635681-79635700 None:intergenic 45.0%
ATTCTAAACGCCGTCGTTTC+CGG - chr1_1:79635710-79635729 Msa0047070:CDS 45.0%
TAAGCTAGAACCGGAAACGA+CGG + chr1_1:79635723-79635742 None:intergenic 45.0%
CATGCAATGCTTGTAAGGCT+CGG - chr1_1:79635744-79635763 Msa0047070:CDS 45.0%
TGTCTATTCGAGCTTCGGTA+TGG - chr1_1:79636051-79636070 Msa0047070:CDS 45.0%
GTCTATTCGAGCTTCGGTAT+GGG - chr1_1:79636052-79636071 Msa0047070:CDS 45.0%
CACGGCAACAAATCATTGGA+CGG + chr1_1:79636212-79636231 None:intergenic 45.0%
! AGAGGGTGTATGCGTCAATA+CGG + chr1_1:79636283-79636302 None:intergenic 45.0%
TGCTGGGAAAAATACCGTGA+AGG - chr1_1:79636813-79636832 Msa0047070:intron 45.0%
! CGTGAAGGAAGAGGATTTTG+AGG - chr1_1:79636828-79636847 Msa0047070:intron 45.0%
GACAGTGAAAATGAGTCTCC+AGG - chr1_1:79636916-79636935 Msa0047070:intron 45.0%
AGCTTTCACCGGATTTACCA+CGG + chr1_1:79636954-79636973 None:intergenic 45.0%
CTATTTGTCGGTCTTCAGAC+AGG - chr1_1:79636985-79637004 Msa0047070:intron 45.0%
!! CTCAATCGGGTGTTATTCCT+GGG + chr1_1:79637105-79637124 None:intergenic 45.0%
AGGATTGTTCTGCTTGCATC+CGG - chr1_1:79637123-79637142 Msa0047070:intron 45.0%
!!! GCTCCCAGGTTTTTTTTCCA+AGG - chr1_1:79638034-79638053 Msa0047070:intron 45.0%
!!! TGACTGTTTTTTTCCGGCCT+TGG + chr1_1:79638219-79638238 None:intergenic 45.0%
GTGAAGACAAAGTGAAGCAC+CGG + chr1_1:79638276-79638295 None:intergenic 45.0%
! AGTCGTCAGCTGCTTTATGA+TGG - chr1_1:79639042-79639061 Msa0047070:intron 45.0%
CAAAGTGGACATGGCTAAGT+TGG - chr1_1:79639257-79639276 Msa0047070:intron 45.0%
CTCAACTCCTTTACATCAGG+CGG - chr1_1:79639374-79639393 Msa0047070:intron 45.0%
GTTATGGAGCTCTTGGAACA+GGG - chr1_1:79639420-79639439 Msa0047070:intron 45.0%
TCAATGCATCACGTCTTGTG+AGG + chr1_1:79639813-79639832 None:intergenic 45.0%
GTGGTCCTATTGACAACCTA+TGG + chr1_1:79640069-79640088 None:intergenic 45.0%
!! GATCGGTGTTGTAGCTTTAG+TGG - chr1_1:79640122-79640141 Msa0047070:intron 45.0%
CCAGTTGTGGTATCACAGAT+CGG - chr1_1:79640155-79640174 Msa0047070:intron 45.0%
AAAGGGATGTTACTGAGTCG+AGG - chr1_1:79640274-79640293 Msa0047070:intron 45.0%
ATGTTACTGAGTCGAGGAGA+GGG - chr1_1:79640280-79640299 Msa0047070:intron 45.0%
TGGGCATTTCACTTCCAATC+AGG - chr1_1:79640314-79640333 Msa0047070:intron 45.0%
GGGCATTTCACTTCCAATCA+GGG - chr1_1:79640315-79640334 Msa0047070:intron 45.0%
GATGTGCAAAGCAGTTTCTC+TGG + chr1_1:79640397-79640416 None:intergenic 45.0%
GTTGCTGAATGTTGGGTCAT+CGG + chr1_1:79640435-79640454 None:intergenic 45.0%
! GTTGCTGGTTGCTGAATGTT+GGG + chr1_1:79640442-79640461 None:intergenic 45.0%
!!! GCCTGTTTCTGCTCTGTTTT+CGG - chr1_1:79640482-79640501 Msa0047070:intron 45.0%
ACCGAAAACAGAGCAGAAAC+AGG + chr1_1:79640486-79640505 None:intergenic 45.0%
TGTGGCGTTATATTGCAGTG+TGG + chr1_1:79641021-79641040 None:intergenic 45.0%
TATATCACCCGTGCATTGCA+CGG + chr1_1:79641584-79641603 None:intergenic 45.0%
!! GGTGTGAGTTGATTCTGTTG+TGG - chr1_1:79641778-79641797 Msa0047070:intron 45.0%
! GTTGATTCTGTTGTGGTCAC+TGG - chr1_1:79641785-79641804 Msa0047070:intron 45.0%
!!! GTTTTTTGAGGACATCGACG+CGG - chr1_1:79641867-79641886 Msa0047070:intron 45.0%
TTTGTGGAGATGAAGATGGG+TGG - chr1_1:79641996-79642015 Msa0047070:intron 45.0%
ATGGTTGCTTCTTGCGTCAT+TGG - chr1_1:79642236-79642255 Msa0047070:intron 45.0%
TGTTTGTTCATCCCTCGATC+TGG - chr1_1:79642280-79642299 Msa0047070:intron 45.0%
TCAAGACCACAGTGAATCTG+TGG - chr1_1:79642318-79642337 Msa0047070:intron 45.0%
CCAAATCCACAGATTCACTG+TGG + chr1_1:79642327-79642346 None:intergenic 45.0%
CCACAGTGAATCTGTGGATT+TGG - chr1_1:79642324-79642343 Msa0047070:intron 45.0%
!!! TGGTTGTTTTGGCTCGAAAG+GGG - chr1_1:79642355-79642374 Msa0047070:intron 45.0%
ACAATCCACAAACGCACGTA+GGG + chr1_1:79642516-79642535 None:intergenic 45.0%
AACAATCCACAAACGCACGT+AGG + chr1_1:79642517-79642536 None:intergenic 45.0%
! GTGCGTTTGTGGATTGTTTG+TGG - chr1_1:79642519-79642538 Msa0047070:intron 45.0%
TACCAACTGAGCTAAGCTCA+CGG + chr1_1:79643585-79643604 None:intergenic 45.0%
! TGAGCTTAGCTCAGTTGGTA+AGG - chr1_1:79643585-79643604 Msa0047070:intron 45.0%
GATCTAGGTAGGAGAGATTG+GGG + chr1_1:79644655-79644674 None:intergenic 45.0%
GGATCTAGGTAGGAGAGATT+GGG + chr1_1:79644656-79644675 None:intergenic 45.0%
TGGATCTAGGTAGGAGAGAT+TGG + chr1_1:79644657-79644676 None:intergenic 45.0%
!! ATTTTCAAGCCAGCTTGAGG+GGG + chr1_1:79644913-79644932 None:intergenic 45.0%
!! CATTTTCAAGCCAGCTTGAG+GGG + chr1_1:79644914-79644933 None:intergenic 45.0%
!! GACATTTTCAAGCCAGCTTG+AGG + chr1_1:79644916-79644935 None:intergenic 45.0%
AGGTTTCTTGGGTAGTCCTT+TGG - chr1_1:79644969-79644988 Msa0047070:intron 45.0%
CATGTTTGGTCCTGTCATGT+AGG - chr1_1:79645088-79645107 Msa0047070:intron 45.0%
TGGAATTTGTGAGGGGTTGT+GGG + chr1_1:79645211-79645230 None:intergenic 45.0%
ATGGAATTTGTGAGGGGTTG+TGG + chr1_1:79645212-79645231 None:intergenic 45.0%
TGGCTCATGGAATTTGTGAG+GGG + chr1_1:79645218-79645237 None:intergenic 45.0%
GTGGCTCATGGAATTTGTGA+GGG + chr1_1:79645219-79645238 None:intergenic 45.0%
AGTGGCTCATGGAATTTGTG+AGG + chr1_1:79645220-79645239 None:intergenic 45.0%
! GAATTTAGAGCAGTGGCTCA+TGG + chr1_1:79645231-79645250 None:intergenic 45.0%
TAGGGGGAAACTTGGTTAGT+TGG + chr1_1:79645299-79645318 None:intergenic 45.0%
AGATACTTGAAGGGATCACC+CGG + chr1_1:79645435-79645454 None:intergenic 45.0%
!! TAAAGGGAGGTATCAGCGAT+TGG + chr1_1:79645564-79645583 None:intergenic 45.0%
GCCTGCTGAAGCTAGAAATA+TGG + chr1_1:79645591-79645610 None:intergenic 45.0%
TAAATCTGCTGAGACACCCA+TGG + chr1_1:79645633-79645652 None:intergenic 45.0%
! GAATCAGCGGAAGTATGTTC+TGG + chr1_1:79645687-79645706 None:intergenic 45.0%
GGAACTGTGGTAAAAGGACT+TGG + chr1_1:79645938-79645957 None:intergenic 45.0%
! GTTTGAGAGGTTTGGAACTG+TGG + chr1_1:79645951-79645970 None:intergenic 45.0%
! AGAGCTTGGTTTGAGAGGTT+TGG + chr1_1:79645959-79645978 None:intergenic 45.0%
AACCTCTCAAACCAAGCTCT+TGG - chr1_1:79645959-79645978 Msa0047070:intron 45.0%
ACCTCTCAAACCAAGCTCTT+GGG - chr1_1:79645960-79645979 Msa0047070:intron 45.0%
TGAAACAATCCCCAAGAGCT+TGG + chr1_1:79645973-79645992 None:intergenic 45.0%
! GAGTTTTGCAACTGGAGCAA+AGG - chr1_1:79646177-79646196 Msa0047070:intron 45.0%
CAAGGCTAGGTTAGTAGCTA+AGG + chr1_1:79646239-79646258 None:intergenic 45.0%
TCCATCTGCTTTGCACTTGA+TGG - chr1_1:79646273-79646292 Msa0047070:intron 45.0%
ACCATCAAGTGCAAAGCAGA+TGG + chr1_1:79646277-79646296 None:intergenic 45.0%
! CCCACCTTCTTTTTGTCATG+TGG - chr1_1:79646313-79646332 Msa0047070:intron 45.0%
AAGCACTAGATGATCCCAAC+TGG + chr1_1:79646405-79646424 None:intergenic 45.0%
!!! GGTAGTTTTGGGAGAGGTTT+TGG - chr1_1:79646476-79646495 Msa0047070:intron 45.0%
!!! GTTTTGGGAGAGGTTTTGGT+AGG - chr1_1:79646480-79646499 Msa0047070:intron 45.0%
TTGATCTACCCATAGCCGTT+AGG + chr1_1:79646576-79646595 None:intergenic 45.0%
CTTTGTTGAACCATCATCCG+GGG - chr1_1:79646642-79646661 Msa0047070:intron 45.0%
!! ATCCGGGGTTTCTAGTTGAT+TGG - chr1_1:79646657-79646676 Msa0047070:intron 45.0%
!! GACTGACTTCTGACCTTTTG+AGG - chr1_1:79646694-79646713 Msa0047070:intron 45.0%
ATTAACACTCTCCCCCTGAA+GGG - chr1_1:79646948-79646967 Msa0047070:intron 45.0%
! ACACTTGTACCCCTTTTGGT+TGG - chr1_1:79647050-79647069 Msa0047070:intron 45.0%
!! CACTTGTACCCCTTTTGGTT+GGG - chr1_1:79647051-79647070 Msa0047070:intron 45.0%
GCGATAACTTAACACACGAG+TGG - chr1_1:79647229-79647248 Msa0047070:intron 45.0%
CGATCATACACGGCTATGTT+GGG + chr1_1:79647582-79647601 None:intergenic 45.0%
ACGATCATACACGGCTATGT+TGG + chr1_1:79647583-79647602 None:intergenic 45.0%
ATGGACCCCATACATCACTA+TGG - chr1_1:79647651-79647670 Msa0047070:CDS 45.0%
GTATCAGTTCTGCCTCTGTT+AGG + chr1_1:79647865-79647884 None:intergenic 45.0%
AGGCAGAACTGATACCACTA+AGG - chr1_1:79647870-79647889 Msa0047070:intron 45.0%
! GGCAGTGCTAAAATGATGGA+TGG + chr1_1:79647941-79647960 None:intergenic 45.0%
CAATCATCTTCCCCGAATTC+CGG - chr1_1:79647960-79647979 Msa0047070:intron 45.0%
!!! TTTTTCAGGACCGGAATTCG+GGG + chr1_1:79647973-79647992 None:intergenic 45.0%
GAGAAGAAAGACCGGTCATA+TGG - chr1_1:79648209-79648228 Msa0047070:intron 45.0%
GCACCTGAATCTATGATCCA+TGG - chr1_1:79648238-79648257 Msa0047070:intron 45.0%
GCACCATGGATCATAGATTC+AGG + chr1_1:79648244-79648263 None:intergenic 45.0%
GAATCTATGATCCATGGTGC+AGG - chr1_1:79648244-79648263 Msa0047070:intron 45.0%
GAGGTGCAACTTAGAGAAGT+AGG - chr1_1:79648274-79648293 Msa0047070:intron 45.0%
GGTGCAACTTAGAGAAGTAG+GGG - chr1_1:79648276-79648295 Msa0047070:intron 45.0%
TCCTCAACTTGATCCTGGTT+GGG - chr1_1:79648376-79648395 Msa0047070:intron 45.0%
!! TTTTTAGCCTCATGTGCTGC+AGG - chr1_1:79648406-79648425 Msa0047070:intron 45.0%
AGTATCCGCAATCAAGGCAT+TGG - chr1_1:79648579-79648598 Msa0047070:CDS 45.0%
TGAGACCAATGCCTTGATTG+CGG + chr1_1:79648587-79648606 None:intergenic 45.0%
GAAGTTCGTGGAAGGATCAT+TGG + chr1_1:79648715-79648734 None:intergenic 45.0%
GAGGAGTTAGATGAAGTTCG+TGG + chr1_1:79648727-79648746 None:intergenic 45.0%
AAGGCTAGAGAAATTCGGCA+AGG + chr1_1:79648907-79648926 None:intergenic 45.0%
! GTTGGTAAACTCCATGGAAG+AGG + chr1_1:79649040-79649059 None:intergenic 45.0%
!! GACATGGTTGGTAAACTCCA+TGG + chr1_1:79649046-79649065 None:intergenic 45.0%
! CTCCATGGTAATGACATGGT+TGG + chr1_1:79649058-79649077 None:intergenic 45.0%
CATCCCACACATCATGTTGT+GGG - chr1_1:79649085-79649104 Msa0047070:intron 45.0%
TGACCCACAACATGATGTGT+GGG + chr1_1:79649091-79649110 None:intergenic 45.0%
GCTGCCTAAAAATGAGCAGA+AGG + chr1_1:79649268-79649287 None:intergenic 45.0%
! CTCCTCTTCACTATTGACTG+AGG - chr1_1:79649308-79649327 Msa0047070:intron 45.0%
! TGTCAGTCATGGAAGTACAG+AGG - chr1_1:79649334-79649353 Msa0047070:intron 45.0%
ATTGCTCCAACATCTGCTAC+AGG - chr1_1:79649698-79649717 Msa0047070:intron 45.0%
GATTGTCCTGTAGCAGATGT+TGG + chr1_1:79649707-79649726 None:intergenic 45.0%
! GGAGGAAATAAAAAGGGCAC+AGG - chr1_1:79650311-79650330 Msa0047070:intron 45.0%
AGAAAAGAGAGCAGCTGCTA+GGG - chr1_1:79650344-79650363 Msa0047070:intron 45.0%
AGCTGCTACAGAGAGAAGAA+TGG - chr1_1:79650389-79650408 Msa0047070:intron 45.0%
! CACATTCATTGGCCTCTGAA+AGG + chr1_1:79650461-79650480 None:intergenic 45.0%
CTTTCAGAGGCCAATGAATG+TGG - chr1_1:79650459-79650478 Msa0047070:intron 45.0%
CCCGACTAAACCACATTCAT+TGG + chr1_1:79650472-79650491 None:intergenic 45.0%
GAAACGGTGGAAGGAATGAT+TGG - chr1_1:79650721-79650740 Msa0047070:intron 45.0%
! GGAGCATCTAATCTCAGCAA+TGG + chr1_1:79650870-79650889 None:intergenic 45.0%
! ATCTGGATCTTATCGGCTGA+TGG + chr1_1:79650891-79650910 None:intergenic 45.0%
CTTTCATCCCTAGCCAATCA+AGG + chr1_1:79650924-79650943 None:intergenic 45.0%
!!! AGTGCTCGCTGATTTTGTAG+CGG + chr1_1:79650949-79650968 None:intergenic 45.0%
TTATAGGGTGAAACTGGTGG+GGG + chr1_1:79651079-79651098 None:intergenic 45.0%
!! TCAAAGCCTTTGAGATAGGC+AGG + chr1_1:79651210-79651229 None:intergenic 45.0%
AGCCGAGTTCAAGACCTATT+TGG - chr1_1:79651448-79651467 Msa0047070:intron 45.0%
!! TGGTGCTGCTGAAGCAAAAT+TGG - chr1_1:79651508-79651527 Msa0047070:intron 45.0%
ATCCGCAAGCTCAAGAGAAA+AGG - chr1_1:79651548-79651567 Msa0047070:intron 45.0%
! CACCTTTTCTCTTGAGCTTG+CGG + chr1_1:79651553-79651572 None:intergenic 45.0%
GCAAGCTCAAGAGAAAAGGT+GGG - chr1_1:79651552-79651571 Msa0047070:intron 45.0%
CAAGCTCAAGAGAAAAGGTG+GGG - chr1_1:79651553-79651572 Msa0047070:intron 45.0%
AAGCTCAAGAGAAAAGGTGG+GGG - chr1_1:79651554-79651573 Msa0047070:intron 45.0%
AAAAGGTGGGGGAAACTCAA+AGG - chr1_1:79651565-79651584 Msa0047070:intron 45.0%
GGTTCTGTGTCTGAAAGTGA+CGG + chr1_1:79651599-79651618 None:intergenic 45.0%
AAGACTTGTGTCCCAATGGA+AGG - chr1_1:79651707-79651726 Msa0047070:intron 45.0%
AGACTTGTGTCCCAATGGAA+GGG - chr1_1:79651708-79651727 Msa0047070:intron 45.0%
GGACTGATATAACATCGCTG+TGG - chr1_1:79651729-79651748 Msa0047070:intron 45.0%
ATATAACATCGCTGTGGGAC+AGG - chr1_1:79651735-79651754 Msa0047070:intron 45.0%
GACAGGAGGTTTGATGGAAT+GGG - chr1_1:79651752-79651771 Msa0047070:intron 45.0%
AAGCTTCACGAAAGATGTGC+AGG - chr1_1:79651793-79651812 Msa0047070:intron 45.0%
! TGGGTTGGAAAAAGCTAGTG+AGG - chr1_1:79651829-79651848 Msa0047070:intron 45.0%
! AAAAGCTAGTGAGGTGCTTG+TGG - chr1_1:79651838-79651857 Msa0047070:intron 45.0%
GACCAATTCAGAGCTGTACT+GGG - chr1_1:79651902-79651921 Msa0047070:intron 45.0%
!! TAACGAGGTTTTTGAGGAGG+AGG - chr1_1:79652084-79652103 Msa0047070:intron 45.0%
!! GTTTTTGAGGAGGAGGTTGT+TGG - chr1_1:79652091-79652110 Msa0047070:intron 45.0%
GAAATCTGCTGCGAAGGATA+TGG - chr1_1:79652144-79652163 Msa0047070:intron 45.0%
!! TCCATCGTTTGATTTGTCGG+AGG - chr1_1:79652501-79652520 Msa0047070:exon 45.0%
GCTATGAAGTCTGTGGTTGA+TGG - chr1_1:79652529-79652548 Msa0047070:five_prime_UTR 45.0%
!!! TTAATTTTCTAATATATAAT+AGG + chr1_1:79641499-79641518 None:intergenic 5.0%
!!! ATATTTTTCATTTTTTTTTA+AGG + chr1_1:79642705-79642724 None:intergenic 5.0%
!! AAAAAAAAATGAAAAATATT+TGG - chr1_1:79642706-79642725 Msa0047070:intron 5.0%
!! AAATATAAATAAAATAACAT+GGG + chr1_1:79643274-79643293 None:intergenic 5.0%
!! TAATAAAATAATTATTTGTA+TGG - chr1_1:79643295-79643314 Msa0047070:intron 5.0%
!! TAATAAATATTATAAAATCA+CGG + chr1_1:79643934-79643953 None:intergenic 5.0%
!! TTCTTAATATATTAAAAATA+CGG + chr1_1:79644038-79644057 None:intergenic 5.0%
!!! ATTTGATTTTATAAAATTAA+TGG - chr1_1:79644507-79644526 Msa0047070:intron 5.0%
!!! TTTGATTTTATAAAATTAAT+GGG - chr1_1:79644508-79644527 Msa0047070:intron 5.0%
!! TTTCTAATTAAAAAAAAAAA+TGG + chr1_1:79651114-79651133 None:intergenic 5.0%
GGGAAGGGAGAAAACGACAA+TGG + chr1_1:79635646-79635665 None:intergenic 50.0%
CGTGGTTTGAAGGTGGTTGA+AGG + chr1_1:79635682-79635701 None:intergenic 50.0%
TGATCGACGTGGTTTGAAGG+TGG + chr1_1:79635689-79635708 None:intergenic 50.0%
ACGCGCATCATCCAATGTCA+CGG + chr1_1:79636230-79636249 None:intergenic 50.0%
! GTATTGACGCATACACCCTC+TGG - chr1_1:79636282-79636301 Msa0047070:CDS 50.0%
CCACGGATAACACTTTGACC+TGG + chr1_1:79636937-79636956 None:intergenic 50.0%
! CCAGGTCAAAGTGTTATCCG+TGG - chr1_1:79636934-79636953 Msa0047070:intron 50.0%
AATCTCTGACAGTTGAGCCC+AGG - chr1_1:79637085-79637104 Msa0047070:intron 50.0%
!! CCTCAATCGGGTGTTATTCC+TGG + chr1_1:79637106-79637125 None:intergenic 50.0%
CCAGGAATAACACCCGATTG+AGG - chr1_1:79637103-79637122 Msa0047070:intron 50.0%
ATTGTTCTGCTTGCATCCGG+TGG - chr1_1:79637126-79637145 Msa0047070:intron 50.0%
TTGTTCTGCTTGCATCCGGT+GGG - chr1_1:79637127-79637146 Msa0047070:intron 50.0%
CAGATATGTTGTGAGCGCCA+AGG - chr1_1:79638199-79638218 Msa0047070:intron 50.0%
GGCAAGACTGTACATACTGC+CGG - chr1_1:79638254-79638273 Msa0047070:intron 50.0%
AGCAGCTGACGACTACTTGA+AGG + chr1_1:79639036-79639055 None:intergenic 50.0%
! CGTTTTGCTTCCCTGAGAGT+AGG + chr1_1:79639129-79639148 None:intergenic 50.0%
ATGTCCACTTTGCTAGCAGG+AGG + chr1_1:79639249-79639268 None:intergenic 50.0%
TCCTGCTAGCAAAGTGGACA+TGG - chr1_1:79639248-79639267 Msa0047070:intron 50.0%
GATTGTGCCGCCTGATGTAA+AGG + chr1_1:79639384-79639403 None:intergenic 50.0%
TTACATCAGGCGGCACAATC+TGG - chr1_1:79639384-79639403 Msa0047070:intron 50.0%
GGTTATGGAGCTCTTGGAAC+AGG - chr1_1:79639419-79639438 Msa0047070:intron 50.0%
TAGGGGACGAACCCCATATA+TGG - chr1_1:79639467-79639486 Msa0047070:intron 50.0%
! TGCCAGGTGCCACCATATAT+GGG + chr1_1:79639482-79639501 None:intergenic 50.0%
! TTGCCAGGTGCCACCATATA+TGG + chr1_1:79639483-79639502 None:intergenic 50.0%
GGGAGACTAGGGAGTAAGTA+TGG - chr1_1:79639754-79639773 Msa0047070:intron 50.0%
GACTAGGGAGTAAGTATGGC+TGG - chr1_1:79639758-79639777 Msa0047070:intron 50.0%
TCTGCCTGTACAGGCACAAA+AGG + chr1_1:79639893-79639912 None:intergenic 50.0%
CAATAGGACCACTCTCACGT+TGG - chr1_1:79640077-79640096 Msa0047070:intron 50.0%
CCGATCTGTGATACCACAAC+TGG + chr1_1:79640158-79640177 None:intergenic 50.0%
GATGTTACTGAGTCGAGGAG+AGG - chr1_1:79640279-79640298 Msa0047070:intron 50.0%
TGTTACTGAGTCGAGGAGAG+GGG - chr1_1:79640281-79640300 Msa0047070:intron 50.0%
! GGTTGCTGGTTGCTGAATGT+TGG + chr1_1:79640443-79640462 None:intergenic 50.0%
ACAGAGCAGAAACAGGCATC+CGG + chr1_1:79640479-79640498 None:intergenic 50.0%
! TCAGGATAATGGCGTGTAGC+AGG + chr1_1:79641059-79641078 None:intergenic 50.0%
GTGTTAACCCGTGCAATGCA+CGG - chr1_1:79641573-79641592 Msa0047070:intron 50.0%
TGTTAACCCGTGCAATGCAC+GGG - chr1_1:79641574-79641593 Msa0047070:intron 50.0%
ATATCACCCGTGCATTGCAC+GGG + chr1_1:79641583-79641602 None:intergenic 50.0%
GCGTAGATGCTCCGTATTGA+TGG - chr1_1:79642175-79642194 Msa0047070:intron 50.0%
GACGCAAGAAGCAACCATAG+AGG + chr1_1:79642234-79642253 None:intergenic 50.0%
TCATCCCTCGATCTGGACTT+CGG - chr1_1:79642287-79642306 Msa0047070:intron 50.0%
!!! GGTTGTTTTGGCTCGAAAGG+GGG - chr1_1:79642356-79642375 Msa0047070:intron 50.0%
! TTGGCTCGAAAGGGGGTTTA+TGG - chr1_1:79642363-79642382 Msa0047070:intron 50.0%
CTTAGAAGCTAGGGAGCTGT+TGG - chr1_1:79642396-79642415 Msa0047070:intron 50.0%
GATCGTCCGCCAACATAGAA+AGG + chr1_1:79642431-79642450 None:intergenic 50.0%
CAATCCACAAACGCACGTAG+GGG + chr1_1:79642515-79642534 None:intergenic 50.0%
ACCAACTGAGCTAAGCTCAC+GGG + chr1_1:79643584-79643603 None:intergenic 50.0%
! AAGGTCTGGGGTTCAAACCT+CGG - chr1_1:79643626-79643645 Msa0047070:intron 50.0%
TTGAAACCAGGCGTGGATCT+AGG + chr1_1:79644670-79644689 None:intergenic 50.0%
! CTACTGATTGAAACCAGGCG+TGG + chr1_1:79644677-79644696 None:intergenic 50.0%
CATAACTCGCAAGCTGTCCA+TGG + chr1_1:79644941-79644960 None:intergenic 50.0%
TTGGTCCTGTCATGTAGGAC+TGG - chr1_1:79645093-79645112 Msa0047070:intron 50.0%
TGGTCCTGTCATGTAGGACT+GGG - chr1_1:79645094-79645113 Msa0047070:intron 50.0%
ACAACCCAGTCCTACATGAC+AGG + chr1_1:79645101-79645120 None:intergenic 50.0%
AATTTGTGAGGGGTTGTGGG+TGG + chr1_1:79645208-79645227 None:intergenic 50.0%
! GGGGAAACTTGGTTAGTTGG+AGG + chr1_1:79645296-79645315 None:intergenic 50.0%
TACACAGATGCAGATTGGGC+TGG + chr1_1:79645366-79645385 None:intergenic 50.0%
AGCCCAATCTGCATCTGTGT+AGG - chr1_1:79645365-79645384 Msa0047070:intron 50.0%
GATACTTGAAGGGATCACCC+GGG + chr1_1:79645434-79645453 None:intergenic 50.0%
GCTTCTTGATGTTCAGGTCC+TGG - chr1_1:79645471-79645490 Msa0047070:intron 50.0%
AGTCAGTTCATGCATGCACC+AGG + chr1_1:79645492-79645511 None:intergenic 50.0%
CCTCTCAAACCAAGCTCTTG+GGG - chr1_1:79645961-79645980 Msa0047070:intron 50.0%
!! CCAGTTCAAGTTGGCAGCAA+GGG - chr1_1:79646132-79646151 Msa0047070:intron 50.0%
! TGGAAGTGTGGAGAGGTACA+AGG + chr1_1:79646257-79646276 None:intergenic 50.0%
! AAGCAGATGGAAGTGTGGAG+AGG + chr1_1:79646264-79646283 None:intergenic 50.0%
GTGCAAAGCAGATGGAAGTG+TGG + chr1_1:79646269-79646288 None:intergenic 50.0%
CAACTAGAAACCCCGGATGA+TGG + chr1_1:79646655-79646674 None:intergenic 50.0%
AGGTGGTGCCCAAATAGGAA+AGG + chr1_1:79646767-79646786 None:intergenic 50.0%
GACTTAGGTGGTGCCCAAAT+AGG + chr1_1:79646772-79646791 None:intergenic 50.0%
ATTTGGGCACCACCTAAGTC+TGG - chr1_1:79646772-79646791 Msa0047070:intron 50.0%
TTTGGGCACCACCTAAGTCT+GGG - chr1_1:79646773-79646792 Msa0047070:intron 50.0%
AACCTTGTCCCAGACTTAGG+TGG + chr1_1:79646784-79646803 None:intergenic 50.0%
GGAAACCTTGTCCCAGACTT+AGG + chr1_1:79646787-79646806 None:intergenic 50.0%
CATTAACACTCTCCCCCTGA+AGG - chr1_1:79646947-79646966 Msa0047070:intron 50.0%
TCGGTATGCAATCGACATGC+TGG - chr1_1:79647177-79647196 Msa0047070:intron 50.0%
GGATGCATGATAAGGTCGAG+AGG - chr1_1:79647691-79647710 Msa0047070:intron 50.0%
! AAAGTGGCTCATGGCCTTAG+TGG + chr1_1:79647887-79647906 None:intergenic 50.0%
CGGAATTCGGGGAAGATGAT+TGG + chr1_1:79647962-79647981 None:intergenic 50.0%
GGTGCTTCTGACCATATGAC+CGG + chr1_1:79648223-79648242 None:intergenic 50.0%
CCTCAAATATGCCTGCACCA+TGG + chr1_1:79648258-79648277 None:intergenic 50.0%
CCATGGTGCAGGCATATTTG+AGG - chr1_1:79648255-79648274 Msa0047070:intron 50.0%
TGAGCTCCTCAACTTGATCC+TGG - chr1_1:79648371-79648390 Msa0047070:intron 50.0%
CTCCTCAACTTGATCCTGGT+TGG - chr1_1:79648375-79648394 Msa0047070:intron 50.0%
AACTTGATCCTGGTTGGGCA+AGG - chr1_1:79648381-79648400 Msa0047070:intron 50.0%
ATCTGTTCCTGCAGCACATG+AGG + chr1_1:79648416-79648435 None:intergenic 50.0%
TGTGCTGCAGGAACAGATCT+AGG - chr1_1:79648418-79648437 Msa0047070:intron 50.0%
!! TCAGATGTGCTGGTTTCCCA+TGG - chr1_1:79648458-79648477 Msa0047070:CDS 50.0%
TTTCCCATGGAGTTTCCAGC+AGG - chr1_1:79648471-79648490 Msa0047070:CDS 50.0%
AGACCTGCTGGAAACTCCAT+GGG + chr1_1:79648477-79648496 None:intergenic 50.0%
!! GCAATCAAGGCATTGGTCTC+AGG - chr1_1:79648586-79648605 Msa0047070:CDS 50.0%
!! ATCAAGGCATTGGTCTCAGG+AGG - chr1_1:79648589-79648608 Msa0047070:CDS 50.0%
! GCATTGGTCTCAGGAGGATA+TGG - chr1_1:79648595-79648614 Msa0047070:CDS 50.0%
!! CAGGAGTGTCATGATGGGAA+AGG + chr1_1:79648632-79648651 None:intergenic 50.0%
!! ACTCGCAGGAGTGTCATGAT+GGG + chr1_1:79648637-79648656 None:intergenic 50.0%
!! AACTCGCAGGAGTGTCATGA+TGG + chr1_1:79648638-79648657 None:intergenic 50.0%
TTAGAAGGGAGGAAACTCGC+AGG + chr1_1:79648651-79648670 None:intergenic 50.0%
GTTTCTTGCCGGTCTCAATG+AGG + chr1_1:79648746-79648765 None:intergenic 50.0%
CATTGAGACCGGCAAGAAAC+TGG - chr1_1:79648746-79648765 Msa0047070:CDS 50.0%
!! GCTGCTGATTTCCTCTTCCA+TGG - chr1_1:79649026-79649045 Msa0047070:CDS 50.0%
GTGGGATGCTGAAAACTCCA+TGG + chr1_1:79649073-79649092 None:intergenic 50.0%
GCATCCCACACATCATGTTG+TGG - chr1_1:79649084-79649103 Msa0047070:intron 50.0%
GTGACCCACAACATGATGTG+TGG + chr1_1:79649092-79649111 None:intergenic 50.0%
TGTTGTGGGTCACTAGCATC+TGG - chr1_1:79649099-79649118 Msa0047070:intron 50.0%
CGACCCATTGAGTCGAAAAG+AGG - chr1_1:79649206-79649225 Msa0047070:intron 50.0%
GAGCAGAAGGTTGCTTATGG+CGG + chr1_1:79649255-79649274 None:intergenic 50.0%
GACTGAGGAACTGTCAGTCA+TGG - chr1_1:79649323-79649342 Msa0047070:intron 50.0%
! TGTGGTGTTCAGTCTGAAGC+TGG - chr1_1:79649662-79649681 Msa0047070:intron 50.0%
GAGAAAAGAGAGCAGCTGCT+AGG - chr1_1:79650343-79650362 Msa0047070:intron 50.0%
AATGGCTGCCCTCAAAAGTC+AGG - chr1_1:79650407-79650426 Msa0047070:intron 50.0%
GCCGATAAGATCCAGATCTG+AGG - chr1_1:79650894-79650913 Msa0047070:CDS 50.0%
ATCAAGGAGGTCCTCAGATC+TGG + chr1_1:79650908-79650927 None:intergenic 50.0%
GATCTGAGGACCTCCTTGAT+TGG - chr1_1:79650908-79650927 Msa0047070:CDS 50.0%
! AGGACCTCCTTGATTGGCTA+GGG - chr1_1:79650914-79650933 Msa0047070:CDS 50.0%
TCATCCCTAGCCAATCAAGG+AGG + chr1_1:79650921-79650940 None:intergenic 50.0%
AGGCAGAACGGTTGCATGAT+CGG + chr1_1:79651027-79651046 None:intergenic 50.0%
GGTTCCCTCTCCCAATACAA+AGG + chr1_1:79651189-79651208 None:intergenic 50.0%
AGGGAACCTGCCTATCTCAA+AGG - chr1_1:79651201-79651220 Msa0047070:CDS 50.0%
CGCAAGCTCAAGAGAAAAGG+TGG - chr1_1:79651551-79651570 Msa0047070:intron 50.0%
GCGGTCACATTGTTCAAAGG+TGG + chr1_1:79651632-79651651 None:intergenic 50.0%
GCAGCGGTCACATTGTTCAA+AGG + chr1_1:79651635-79651654 None:intergenic 50.0%
AACAATGTGACCGCTGCATG+CGG - chr1_1:79651638-79651657 Msa0047070:intron 50.0%
AGGTGGTTCTTCCTTCACCT+AGG - chr1_1:79651666-79651685 Msa0047070:intron 50.0%
GGAGAAGACTTGTGTCCCAA+TGG - chr1_1:79651703-79651722 Msa0047070:intron 50.0%
GGACAGGAGGTTTGATGGAA+TGG - chr1_1:79651751-79651770 Msa0047070:intron 50.0%
CTTCACGAAAGATGTGCAGG+AGG - chr1_1:79651796-79651815 Msa0047070:intron 50.0%
GAAAGATGTGCAGGAGGTGA+AGG - chr1_1:79651802-79651821 Msa0047070:intron 50.0%
AGCCTTCGCTCTGCTTTACT+TGG - chr1_1:79651866-79651885 Msa0047070:intron 50.0%
GCCTTCGCTCTGCTTTACTT+GGG - chr1_1:79651867-79651886 Msa0047070:intron 50.0%
TCCCAAGTAAAGCAGAGCGA+AGG + chr1_1:79651871-79651890 None:intergenic 50.0%
TCGCTCTGCTTTACTTGGGA+AGG - chr1_1:79651871-79651890 Msa0047070:intron 50.0%
GGACCAATTCAGAGCTGTAC+TGG - chr1_1:79651901-79651920 Msa0047070:intron 50.0%
!! GTCCCAGTACAGCTCTGAAT+TGG + chr1_1:79651907-79651926 None:intergenic 50.0%
ACAGACTGCTCTGACTCAGT+TGG - chr1_1:79652045-79652064 Msa0047070:intron 50.0%
CAAAGGGAAATCTGCTGCGA+AGG - chr1_1:79652138-79652157 Msa0047070:intron 50.0%
GCAATCTGCTGCGAAGGATA+TGG - chr1_1:79652270-79652289 Msa0047070:CDS 50.0%
GCTGCCTTTCGCTATCAAGA+TGG - chr1_1:79652442-79652461 Msa0047070:CDS 50.0%
GCCTCCGACAAATCAAACGA+TGG + chr1_1:79652505-79652524 None:intergenic 50.0%
TTGAAGGGTTTCGGAGGGAG+GGG + chr1_1:79635666-79635685 None:intergenic 55.0%
GTTGAAGGGTTTCGGAGGGA+GGG + chr1_1:79635667-79635686 None:intergenic 55.0%
GGTGGTTGAAGGGTTTCGGA+GGG + chr1_1:79635671-79635690 None:intergenic 55.0%
AGGTGGTTGAAGGGTTTCGG+AGG + chr1_1:79635672-79635691 None:intergenic 55.0%
! ACAACCAGCAAAGTGCCCAC+CGG + chr1_1:79637145-79637164 None:intergenic 55.0%
TCTCTTTCTCTCGTGCTCCC+AGG - chr1_1:79638020-79638039 Msa0047070:intron 55.0%
TATGTTGTGAGCGCCAAGGC+CGG - chr1_1:79638203-79638222 Msa0047070:intron 55.0%
GAGTTGGCACTGCGTCTTCT+TGG + chr1_1:79639215-79639234 None:intergenic 55.0%
! GGAGGCGTGTCAATGAGAGT+TGG + chr1_1:79639231-79639250 None:intergenic 55.0%
GCCATGTCCACTTTGCTAGC+AGG + chr1_1:79639252-79639271 None:intergenic 55.0%
GGGACGAACCCCATATATGG+TGG - chr1_1:79639470-79639489 Msa0047070:intron 55.0%
ACCCCATATATGGTGGCACC+TGG - chr1_1:79639477-79639496 Msa0047070:intron 55.0%
! GCCAGGTGCCACCATATATG+GGG + chr1_1:79639481-79639500 None:intergenic 55.0%
GCATCACGTCTTGTGAGGAC+CGG + chr1_1:79639808-79639827 None:intergenic 55.0%
! GCCTCCTTTTGTGCCTGTAC+AGG - chr1_1:79639886-79639905 Msa0047070:intron 55.0%
GCCTGTACAGGCACAAAAGG+AGG + chr1_1:79639890-79639909 None:intergenic 55.0%
CCTGTGGTGGCATCACAGAT+CGG - chr1_1:79640105-79640124 Msa0047070:intron 55.0%
TGGCTGCTATCAGCCAGTTG+TGG - chr1_1:79640142-79640161 Msa0047070:intron 55.0%
GTTACTGAGTCGAGGAGAGG+GGG - chr1_1:79640282-79640301 Msa0047070:intron 55.0%
TTACTGAGTCGAGGAGAGGG+GGG - chr1_1:79640283-79640302 Msa0047070:intron 55.0%
! TCATCGGCTGCTGGATCGAT+AGG + chr1_1:79640419-79640438 None:intergenic 55.0%
! AATGTTGGGTCATCGGCTGC+TGG + chr1_1:79640428-79640447 None:intergenic 55.0%
AGGCGACCCCGAAAACATTG+TGG + chr1_1:79641039-79641058 None:intergenic 55.0%
GTACTGCTCTGACATCGACG+CGG - chr1_1:79641834-79641853 Msa0047070:intron 55.0%
GTGGAGATGAAGATGGGTGG+TGG - chr1_1:79641999-79642018 Msa0047070:intron 55.0%
!! GATGGGTGGTGGCTTTGTTC+TGG - chr1_1:79642010-79642029 Msa0047070:intron 55.0%
TCAGCCGAAGTCCAGATCGA+GGG + chr1_1:79642294-79642313 None:intergenic 55.0%
TTCAGCCGAAGTCCAGATCG+AGG + chr1_1:79642295-79642314 None:intergenic 55.0%
CCAACTGAGCTAAGCTCACG+GGG + chr1_1:79643583-79643602 None:intergenic 55.0%
AACCAGGCGTGGATCTAGGT+AGG + chr1_1:79644666-79644685 None:intergenic 55.0%
TTGAAGGGATCACCCGGGAA+GGG + chr1_1:79645429-79645448 None:intergenic 55.0%
!! GGGAGGTATCAGCGATTGGT+AGG + chr1_1:79645560-79645579 None:intergenic 55.0%
! CCCCAAGAGCTTGGTTTGAG+AGG + chr1_1:79645964-79645983 None:intergenic 55.0%
GAGTCTTCCCCCTGGATTTG+AGG + chr1_1:79646047-79646066 None:intergenic 55.0%
GTGTTCATGAGTCTTCCCCC+TGG + chr1_1:79646055-79646074 None:intergenic 55.0%
!! GCCAGTTCAAGTTGGCAGCA+AGG - chr1_1:79646131-79646150 Msa0047070:intron 55.0%
CCCTTGCTGCCAACTTGAAC+TGG + chr1_1:79646135-79646154 None:intergenic 55.0%
! GTGTGGAGAGGTACAAGGCT+AGG + chr1_1:79646252-79646271 None:intergenic 55.0%
!!! AGGCTCGGTAGTTTTGGGAG+AGG - chr1_1:79646470-79646489 Msa0047070:intron 55.0%
! CACCACCTAAGTCTGGGACA+AGG - chr1_1:79646779-79646798 Msa0047070:intron 55.0%
! GCCCAACCAGGATCAAGTTG+AGG + chr1_1:79648380-79648399 None:intergenic 55.0%
! GCAGGAACAGATCTAGGACC+CGG - chr1_1:79648424-79648443 Msa0047070:CDS 55.0%
GAGACCTGCTGGAAACTCCA+TGG + chr1_1:79648478-79648497 None:intergenic 55.0%
GGAGTTTCCAGCAGGTCTCT+CGG - chr1_1:79648479-79648498 Msa0047070:CDS 55.0%
GAGTTTCCAGCAGGTCTCTC+GGG - chr1_1:79648480-79648499 Msa0047070:CDS 55.0%
GGCAGCAGTATCCGCAATCA+AGG - chr1_1:79648573-79648592 Msa0047070:CDS 55.0%
! TCATGGAAGTACAGAGGCGC+AGG - chr1_1:79649340-79649359 Msa0047070:intron 55.0%
! GAGGACCTCCTTGATTGGCT+AGG - chr1_1:79650913-79650932 Msa0047070:CDS 55.0%
AGGTGGGGGAAACTCAAAGG+AGG - chr1_1:79651568-79651587 Msa0047070:intron 55.0%
GGTGGGGGAAACTCAAAGGA+GGG - chr1_1:79651569-79651588 Msa0047070:intron 55.0%
CACCTTAGAACCGCATGCAG+CGG + chr1_1:79651651-79651670 None:intergenic 55.0%
TAACATCGCTGTGGGACAGG+AGG - chr1_1:79651738-79651757 Msa0047070:intron 55.0%
CTGTGGGACAGGAGGTTTGA+TGG - chr1_1:79651746-79651765 Msa0047070:intron 55.0%
TGCAGGAGGTGAAGGAGTCT+GGG - chr1_1:79651810-79651829 Msa0047070:intron 55.0%
GCAGTCTGCTGCGAAGGATA+TGG - chr1_1:79652207-79652226 Msa0047070:intron 55.0%
GCAATCCGCAGCGAAGGATA+TGG - chr1_1:79652396-79652415 Msa0047070:CDS 55.0%
GGCTGACGCTATGAAGTCTG+TGG - chr1_1:79652522-79652541 Msa0047070:five_prime_UTR 55.0%
GGTTGAAGGGTTTCGGAGGG+AGG + chr1_1:79635668-79635687 None:intergenic 60.0%
ATGTCCGCAGGCCTACTCTC+AGG - chr1_1:79639115-79639134 Msa0047070:intron 60.0%
TGTCCGCAGGCCTACTCTCA+GGG - chr1_1:79639116-79639135 Msa0047070:intron 60.0%
CTTCCCTGAGAGTAGGCCTG+CGG + chr1_1:79639122-79639141 None:intergenic 60.0%
CACGCCTCCTGCTAGCAAAG+TGG - chr1_1:79639242-79639261 Msa0047070:intron 60.0%
AGGCAGCTCCAACGTGAGAG+TGG + chr1_1:79640088-79640107 None:intergenic 60.0%
TCTCACGTTGGAGCTGCCTG+TGG - chr1_1:79640089-79640108 Msa0047070:intron 60.0%
CCGATCTGTGATGCCACCAC+AGG + chr1_1:79640108-79640127 None:intergenic 60.0%
TGGCCAATGGCAGCCCTACA+GGG - chr1_1:79640219-79640238 Msa0047070:intron 60.0%
TAGCCCTGTAGGGCTGCCAT+TGG + chr1_1:79640225-79640244 None:intergenic 60.0%
TACTGAGTCGAGGAGAGGGG+GGG - chr1_1:79640284-79640303 Msa0047070:intron 60.0%
! AGGAGAGGGGGGGGTTGTTT+TGG - chr1_1:79640294-79640313 Msa0047070:intron 60.0%
!! GGAGAGGGGGGGGTTGTTTT+GGG - chr1_1:79640295-79640314 Msa0047070:intron 60.0%
GCAACCAGCAACCCACCATC+TGG - chr1_1:79640450-79640469 Msa0047070:intron 60.0%
CACAAACGCACGTAGGGGTG+CGG + chr1_1:79642510-79642529 None:intergenic 60.0%
CCCCGTGAGCTTAGCTCAGT+TGG - chr1_1:79643580-79643599 Msa0047070:intron 60.0%
CTCCTACCTAGATCCACGCC+TGG - chr1_1:79644661-79644680 Msa0047070:intron 60.0%
CTTGAAGGGATCACCCGGGA+AGG + chr1_1:79645430-79645449 None:intergenic 60.0%
GACCGCTGCATGCGGTTCTA+AGG - chr1_1:79651646-79651665 Msa0047070:intron 60.0%
!! CGCTGCATGCGGTTCTAAGG+TGG - chr1_1:79651649-79651668 Msa0047070:intron 60.0%
GTGCAGGAGGTGAAGGAGTC+TGG - chr1_1:79651809-79651828 Msa0047070:intron 60.0%
GGAGGTGAAGGAGTCTGGGT+TGG - chr1_1:79651814-79651833 Msa0047070:intron 60.0%
CAAGGGGCAATCTGCTGCGA+AGG - chr1_1:79652264-79652283 Msa0047070:CDS 60.0%
GGGTTTCGGAGGGAGGGGAA+GGG + chr1_1:79635661-79635680 None:intergenic 65.0%
AGGGTTTCGGAGGGAGGGGA+AGG + chr1_1:79635662-79635681 None:intergenic 65.0%
GCATCCGGTGGGCACTTTGC+TGG - chr1_1:79637138-79637157 Msa0047070:intron 65.0%
CACGTTGGAGCTGCCTGTGG+TGG - chr1_1:79640092-79640111 Msa0047070:intron 65.0%
GTGGCCAATGGCAGCCCTAC+AGG - chr1_1:79640218-79640237 Msa0047070:intron 65.0%
ACTGAGTCGAGGAGAGGGGG+GGG - chr1_1:79640285-79640304 Msa0047070:intron 65.0%
!! GTCGCCAGATGGTGGGTTGC+TGG + chr1_1:79640457-79640476 None:intergenic 65.0%
GCAACCCACCATCTGGCGAC+CGG - chr1_1:79640457-79640476 Msa0047070:intron 65.0%
GCATCCGGTCGCCAGATGGT+GGG + chr1_1:79640464-79640483 None:intergenic 65.0%
ACAGGCATCCGGTCGCCAGA+TGG + chr1_1:79640468-79640487 None:intergenic 65.0%
CGCACCCCTACGTGCGTTTG+TGG - chr1_1:79642508-79642527 Msa0047070:intron 65.0%
TGCGACACTCCCCCTCAAGC+TGG - chr1_1:79644901-79644920 Msa0047070:intron 65.0%
GTCACACCCGAGAGACCTGC+TGG + chr1_1:79648489-79648508 None:intergenic 65.0%
CAGGTCTCTCGGGTGTGACG+TGG - chr1_1:79648490-79648509 Msa0047070:CDS 65.0%
CAAGGGGCAGTCTGCTGCGA+AGG - chr1_1:79652201-79652220 Msa0047070:intron 65.0%
CAAGGGGCAATCCGCAGCGA+AGG - chr1_1:79652390-79652409 Msa0047070:CDS 65.0%
GGCATCCGGTCGCCAGATGG+TGG + chr1_1:79640465-79640484 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 79635483 79652564 79635483 ID=Msa0047070;Name=Msa0047070
chr1_1 mRNA 79635483 79652564 79635483 ID=Msa0047070-mRNA-1;Parent=Msa0047070;Name=Msa0047070-mRNA-1;_AED=0.12;_eAED=0.12;_QI=53|0.54|0.33|1|0.54|0.58|12|0|1023
chr1_1 exon 79635483 79636621 79635483 ID=Msa0047070-mRNA-1:exon:27513;Parent=Msa0047070-mRNA-1
chr1_1 exon 79637516 79637735 79637516 ID=Msa0047070-mRNA-1:exon:27512;Parent=Msa0047070-mRNA-1
chr1_1 exon 79638287 79638373 79638287 ID=Msa0047070-mRNA-1:exon:27511;Parent=Msa0047070-mRNA-1
chr1_1 exon 79647551 79647703 79647551 ID=Msa0047070-mRNA-1:exon:27510;Parent=Msa0047070-mRNA-1
chr1_1 exon 79648062 79648139 79648062 ID=Msa0047070-mRNA-1:exon:27509;Parent=Msa0047070-mRNA-1
chr1_1 exon 79648424 79648627 79648424 ID=Msa0047070-mRNA-1:exon:27508;Parent=Msa0047070-mRNA-1
chr1_1 exon 79648634 79648860 79648634 ID=Msa0047070-mRNA-1:exon:27507;Parent=Msa0047070-mRNA-1
chr1_1 exon 79648900 79649083 79648900 ID=Msa0047070-mRNA-1:exon:27506;Parent=Msa0047070-mRNA-1
chr1_1 exon 79649731 79649845 79649731 ID=Msa0047070-mRNA-1:exon:27505;Parent=Msa0047070-mRNA-1
chr1_1 exon 79650839 79650969 79650839 ID=Msa0047070-mRNA-1:exon:27504;Parent=Msa0047070-mRNA-1
chr1_1 exon 79651003 79651248 79651003 ID=Msa0047070-mRNA-1:exon:27503;Parent=Msa0047070-mRNA-1
chr1_1 exon 79652224 79652564 79652224 ID=Msa0047070-mRNA-1:exon:27502;Parent=Msa0047070-mRNA-1
chr1_1 five_prime_UTR 79652512 79652564 79652512 ID=Msa0047070-mRNA-1:five_prime_utr;Parent=Msa0047070-mRNA-1
chr1_1 CDS 79652224 79652511 79652224 ID=Msa0047070-mRNA-1:cds;Parent=Msa0047070-mRNA-1
chr1_1 CDS 79651003 79651248 79651003 ID=Msa0047070-mRNA-1:cds;Parent=Msa0047070-mRNA-1
chr1_1 CDS 79650839 79650969 79650839 ID=Msa0047070-mRNA-1:cds;Parent=Msa0047070-mRNA-1
chr1_1 CDS 79649731 79649845 79649731 ID=Msa0047070-mRNA-1:cds;Parent=Msa0047070-mRNA-1
chr1_1 CDS 79648900 79649083 79648900 ID=Msa0047070-mRNA-1:cds;Parent=Msa0047070-mRNA-1
chr1_1 CDS 79648634 79648860 79648634 ID=Msa0047070-mRNA-1:cds;Parent=Msa0047070-mRNA-1
chr1_1 CDS 79648424 79648627 79648424 ID=Msa0047070-mRNA-1:cds;Parent=Msa0047070-mRNA-1
chr1_1 CDS 79648062 79648139 79648062 ID=Msa0047070-mRNA-1:cds;Parent=Msa0047070-mRNA-1
chr1_1 CDS 79647551 79647703 79647551 ID=Msa0047070-mRNA-1:cds;Parent=Msa0047070-mRNA-1
chr1_1 CDS 79638287 79638373 79638287 ID=Msa0047070-mRNA-1:cds;Parent=Msa0047070-mRNA-1
chr1_1 CDS 79637516 79637735 79637516 ID=Msa0047070-mRNA-1:cds;Parent=Msa0047070-mRNA-1
chr1_1 CDS 79635483 79636621 79635483 ID=Msa0047070-mRNA-1:cds;Parent=Msa0047070-mRNA-1
Gene Sequence

>Msa0047070

ATGCGTACTGCGCCTAATTCCCTTTCATTACAACAAACAATGGCATCATCTCAAGATCAAGAAAAACTTCAACGTTCAATCTTTCAACTTCCACCAAACTTCTTCGACCATTGTCGTTTTCTCCCTTCCCCTCCCTCCGAAACCCTTCAACCACCTTCAAACCACGTCGATCATATTCTAAACGCCGTCGTTTCCGGTTCTAGCTTAACATGCAATGCTTGTAAGGCTCGGTTTGATTCTTTTCAAGATCAACGTTCTCACCTCAAATCCGATATTCATCGATTCAATGTGAAGTTGACAATTGCTGGGAAAAATACCGTGAAGGAAGAGGATTTTGAGGATCTGACATCTGATTTTGTCAAAGATTGTGATGTGTCAAGTATATCTGGATCAGAAAGTGACGATGACAGTGAAAATGAGTCTCCAGGTCAAAGTGTTATCCGTGGTAAATCCGGTGAAAGCTGTAAAGATAAGCTATTTGTCGGTCTTCAGACAGGGCAGAGAGTTTCTATCTTGAAGTGTCTGATTATGAATAGGTTGAAATCTCTGACAGTTGAGCCCAGGAATAACACCCGATTGAGGATTGTTCTGCTTGCATCCGGTGGGCACTTTGCTGGTTGTGTCTTTGATGGTGATACACTTGTGGCTCACAAGACATTTCATAGATATGTTGTGAGCGCCAAGGCCGGAAAAAAACAGTCATCTAAAGATGCTTCTGGCAAGACTGTACATACTGCCGGTGCTTCACTTTGTCTTCACAAGGAACATTCACTAATATATGAAGTTCGTGATCTACTTACTGCTTGGAGATCTTATTTCGATGCTTCTATTTGCATTTTTATACATGCACCTTCAAGTAGTCGTCAGCTGCTTTATGATGGAGAAAAGCCATGTTTCACCAATCCACAATGTGTTAGAAATATTGCTATGAATGTCCGCAGGCCTACTCTCAGGGAAGCAAAACACGAGAAAGAAATTTTACAGAGCAACCAAGAAGACGCAGTGCCAACTCTCATTGACACGCCTCCTGCTAGCAAAGTGGACATGGCTAAGTTGGATATAAACGCTAAAGCTGAAGCTTGTTCCAGTAACAAAAATGATGAACGTCTTGCTTCAAGTAAAGTCAAAATTGAGAGTGAGTTTACTATCAACTCAACTCCTTTACATCAGGCGGCACAATCTGGTGATGCTGTTATGGAGCTCTTGGAACAGGGCTTGAATCCATGCATTAAAGATGATAGGGGACGAACCCCATATATGGTGGCACCTGGCAAGCAAATCAAGAAAACTTTCAGAAGGTTTATGGCTTCAAATCTTGACAAATGGGATTGGAAAGCTGCAAAAGTGTTTTGTCCATTGACCAAAGAAATGGAAGAATCACAAGCTGCTATGAAGGCAGAAAAAAAAGCCGAGAGAAGAGCTAGAGTAAAAAAATTGATGGAAATACGTGAAGCAGAAGAAATTAAGGCTCAGAGTTCTAAGAGAGCTCACAAAACTTCACGATATCACCGTCAATCATTGAACCAGAGAAACTGCTTTGCACATCCTATCGATCCAGCAGCCGATGACCCAACATTCAGCAACCAGCAACCCACCATCTGGCGACCGGATGCCTGTTTCTGCTCTTCTGAAGCTGGTGAAAAACAAGTGATTGCTCCAACATCTGCTACAGGACAATCTCAACCAAAAAGTGGTGCGAAATTATCGAAAGAGGAGGAAATAAAAAGGGCACAGGATGCTGAAAGAGAAAAGAGAGCAGCTGCTAGGGATGCAGAAAGAGAAAAGAGAGCAGCTGCTACAGAGAGAAGAATGGCTGCCCTCAAAAGTCAGGCTTATACTACAACCACTTCAGCTAATAGCCTTTCAGAGGCCAATGAATGTGGTTTAGTCGGGGATACAACATCCTTTTCCTGTTGTAATTCATCACTTGCTGGAAGAATGTCTCCTCTAAATGAAGCCGAGTTCAAGACCTATTTGGCAAAGGCTAGAGAAAAGAGAGCCTCAGTTTTGCAATTTGGTGCTGCTGAAGCAAAATTGGACGTTAGTGGTGTTACAATCCGCAAGCTCAAGAGAAAAGGTGGGGGAAACTCAAAGGAGGGATCACCGTCACTTTCAGACACAGAACCTATTGCTGTACCACCTTTGAACAATGTGACCGCTGCATGCGGTTCTAAGGTGGTTCTTCCTTCACCTAGGAAAAGGATTAAGAAGGAGAAGACTTGTGTCCCAATGGAAGGGACTGATATAACATCGCTGTGGGACAGGAGGTTTGATGGAATGGGTTTTGTGGACAGCAATCTAAGCTTCACGAAAGATGTGCAGGAGGTGAAGGAGTCTGGGTTGGAAAAAGCTAGTGAGGTGCTTGTGGCGTACAGCCTTCGCTCTGCTTTACTTGGGAAGGTGATTACGGACCAATTCAGAGCTGTACTGGGACATGAAAGAAACTGCCGAGATGAACTGAATTCAACCAAAGAAAAATTGAAAATAGCCAATGATACTCTTGGAGATATGAAGAAACAAATATTGAAGGTAAATAAGAGATTGGAGGAAGAACAGACTGCTCTGACTCAGTTGGAGAAAAAGACTGAAAATAACGAGGTTTTTGAGGAGGAGGTTGTTGGCTTGAAGAAAAGTGTAGATACACTCAAAGGGAAATCTGCTGCGAAGGATATGGAAATTGAGGATTTGAAGAAAAGTATAGATACGCTCAAGGGGCAGTCTGCTGCGAAGGATATGGAAATTGAGGATTTGAAGAAAAGTATATATACGCTCAAGGGGCAATCTGCTGCGAAGGATATGGAAATTGAGGATTTGAAGAAAAGCGTAGATATGCTCAAGAGGCAATCCGCAACAAAAGATATGGAAATTGAGGATTTGAAGCAAAGTATAGATACGCTCAAGGGGCAATCCGCAGCGAAGGATATGGAAATTGAGGATTTGAAGGTAGACGCTGCCTTTCGCTATCAAGATGGTTTTGATAAGGCCATAGAACAAGTTCACATCCTATTTCCATCGTTTGATTTGTCGGAGGCTGACGCTATGAAGTCTGTGGTTGATGGAAAACTAGTATAA
Protein sequence

>Msa0047070

MRTAPNSLSLQQTMASSQDQEKLQRSIFQLPPNFFDHCRFLPSPPSETLQPPSNHVDHILNAVVSGSSLTCNACKARFDSFQDQRSHLKSDIHRFNVKLTIAGKNTVKEEDFEDLTSDFVKDCDVSSISGSESDDDSENESPGQSVIRGKSGESCKDKLFVGLQTGQRVSILKCLIMNRLKSLTVEPRNNTRLRIVLLASGGHFAGCVFDGDTLVAHKTFHRYVVSAKAGKKQSSKDASGKTVHTAGASLCLHKEHSLIYEVRDLLTAWRSYFDASICIFIHAPSSSRQLLYDGEKPCFTNPQCVRNIAMNVRRPTLREAKHEKEILQSNQEDAVPTLIDTPPASKVDMAKLDINAKAEACSSNKNDERLASSKVKIESEFTINSTPLHQAAQSGDAVMELLEQGLNPCIKDDRGRTPYMVAPGKQIKKTFRRFMASNLDKWDWKAAKVFCPLTKEMEESQAAMKAEKKAERRARVKKLMEIREAEEIKAQSSKRAHKTSRYHRQSLNQRNCFAHPIDPAADDPTFSNQQPTIWRPDACFCSSEAGEKQVIAPTSATGQSQPKSGAKLSKEEEIKRAQDAEREKRAAARDAEREKRAAATERRMAALKSQAYTTTTSANSLSEANECGLVGDTTSFSCCNSSLAGRMSPLNEAEFKTYLAKAREKRASVLQFGAAEAKLDVSGVTIRKLKRKGGGNSKEGSPSLSDTEPIAVPPLNNVTAACGSKVVLPSPRKRIKKEKTCVPMEGTDITSLWDRRFDGMGFVDSNLSFTKDVQEVKESGLEKASEVLVAYSLRSALLGKVITDQFRAVLGHERNCRDELNSTKEKLKIANDTLGDMKKQILKVNKRLEEEQTALTQLEKKTENNEVFEEEVVGLKKSVDTLKGKSAAKDMEIEDLKKSIDTLKGQSAAKDMEIEDLKKSIYTLKGQSAAKDMEIEDLKKSVDMLKRQSATKDMEIEDLKQSIDTLKGQSAAKDMEIEDLKVDAAFRYQDGFDKAIEQVHILFPSFDLSEADAMKSVVDGKLV*