Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1367370 | XP_003604026.1 | 99.302 | 573 | 4 | 0 | 4 | 576 | 2 | 574 | 0.0 | 1186 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1367370 | sp|Q9SW48|INVB_ARATH | 79.292 | 565 | 109 | 5 | 14 | 575 | 11 | 570 | 0.0 | 941 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1367370 | G7J8G8 | 99.302 | 573 | 4 | 0 | 4 | 576 | 2 | 574 | 0.0 | 1186 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0000190 | Msa1367370 | 0.801991 | 6.933294e-49 | -8.615850e-47 |
Msa0003700 | Msa1367370 | 0.817345 | 3.460844e-52 | -8.615850e-47 |
Msa0004640 | Msa1367370 | 0.805022 | 1.631535e-49 | -8.615850e-47 |
Msa0007480 | Msa1367370 | 0.803518 | 3.354693e-49 | -8.615850e-47 |
Msa0008110 | Msa1367370 | 0.835516 | 1.603816e-56 | -8.615850e-47 |
Msa0017510 | Msa1367370 | 0.854978 | 8.584520e-62 | -8.615850e-47 |
Msa0027230 | Msa1367370 | 0.806089 | 9.741419e-50 | -8.615850e-47 |
Msa0028420 | Msa1367370 | 0.810788 | 9.683811e-51 | -8.615850e-47 |
Msa0028640 | Msa1367370 | 0.826965 | 2.030776e-54 | -8.615850e-47 |
Msa0034270 | Msa1367370 | 0.806642 | 7.450089e-50 | -8.615850e-47 |
Msa0046100 | Msa1367370 | 0.825096 | 5.648603e-54 | -8.615850e-47 |
Msa0047030 | Msa1367370 | 0.821925 | 3.115704e-53 | -8.615850e-47 |
Msa0047050 | Msa1367370 | 0.812502 | 4.104816e-51 | -8.615850e-47 |
Msa0047070 | Msa1367370 | 0.823236 | 1.543944e-53 | -8.615850e-47 |
Msa0053780 | Msa1367370 | 0.800508 | 1.394385e-48 | -8.615850e-47 |
Msa0056070 | Msa1367370 | 0.800424 | 1.450746e-48 | -8.615850e-47 |
Msa0057420 | Msa1367370 | 0.826214 | 3.067775e-54 | -8.615850e-47 |
Msa0063890 | Msa1367370 | 0.803069 | 4.155525e-49 | -8.615850e-47 |
Msa0069330 | Msa1367370 | 0.813678 | 2.266455e-51 | -8.615850e-47 |
Msa0074240 | Msa1367370 | 0.811865 | 5.652341e-51 | -8.615850e-47 |
Msa0074350 | Msa1367370 | 0.810279 | 1.247669e-50 | -8.615850e-47 |
Msa0075220 | Msa1367370 | 0.801497 | 8.757810e-49 | -8.615850e-47 |
Msa0076250 | Msa1367370 | 0.818747 | 1.668218e-52 | -8.615850e-47 |
Msa0076310 | Msa1367370 | 0.802196 | 6.290818e-49 | -8.615850e-47 |
Msa0078650 | Msa1367370 | 0.809090 | 2.246522e-50 | -8.615850e-47 |
Msa0081050 | Msa1367370 | 0.804872 | 1.753549e-49 | -8.615850e-47 |
Msa0089630 | Msa1367370 | 0.838851 | 2.249123e-57 | -8.615850e-47 |
Msa0090400 | Msa1367370 | 0.806010 | 1.012195e-49 | -8.615850e-47 |
Msa0094120 | Msa1367370 | 0.809001 | 2.348038e-50 | -8.615850e-47 |
Msa0094140 | Msa1367370 | 0.825009 | 5.921719e-54 | -8.615850e-47 |
Msa0095900 | Msa1367370 | 0.800730 | 1.256598e-48 | -8.615850e-47 |
Msa0101440 | Msa1367370 | 0.803552 | 3.301658e-49 | -8.615850e-47 |
Msa0104550 | Msa1367370 | 0.808002 | 3.835606e-50 | -8.615850e-47 |
Msa0110970 | Msa1367370 | 0.851385 | 9.183878e-61 | -8.615850e-47 |
Msa0118570 | Msa1367370 | 0.812293 | 4.559818e-51 | -8.615850e-47 |
Msa1346370 | Msa1367370 | 0.805810 | 1.115424e-49 | -8.615850e-47 |
Msa1365060 | Msa1367370 | 0.952077 | 5.256369e-110 | -8.615850e-47 |
Msa1366600 | Msa1367370 | 0.808201 | 3.479686e-50 | -8.615850e-47 |
Msa1367370 | Msa1369550 | 0.849336 | 3.451474e-60 | -8.615850e-47 |
Msa1367370 | Msa1370010 | 0.802607 | 5.176860e-49 | -8.615850e-47 |
Msa1367370 | Msa1373650 | 0.833795 | 4.342718e-56 | -8.615850e-47 |
Msa1367370 | Msa1374040 | 0.817944 | 2.535917e-52 | -8.615850e-47 |
Msa1367370 | Msa1374550 | 0.822274 | 2.585605e-53 | -8.615850e-47 |
Msa1367370 | Msa1391770 | 0.806646 | 7.434084e-50 | -8.615850e-47 |
Msa1367370 | Msa1398340 | 0.809661 | 1.694219e-50 | -8.615850e-47 |
Msa1367370 | Msa1409870 | 0.813334 | 2.697544e-51 | -8.615850e-47 |
Msa1367370 | Msa1417420 | 0.853987 | 1.661271e-61 | -8.615850e-47 |
Msa1367370 | Msa1419370 | 0.801029 | 1.091712e-48 | -8.615850e-47 |
Msa1367370 | Msa1422420 | 0.845479 | 3.957963e-59 | -8.615850e-47 |
Msa1367370 | Msa1440960 | 0.827640 | 1.399505e-54 | -8.615850e-47 |
Msa1367370 | Msa1443110 | 0.991140 | 4.286372e-186 | -8.615850e-47 |
Msa1367370 | Msa1452930 | 0.817818 | 2.706669e-52 | -8.615850e-47 |
Msa1367370 | Msa1459690 | 0.811456 | 6.939729e-51 | -8.615850e-47 |
Msa1367370 | Msa1460020 | 0.817522 | 3.156373e-52 | -8.615850e-47 |
Msa1367370 | Msa1464640 | 0.800916 | 1.151515e-48 | -8.615850e-47 |
Msa0616220 | Msa1367370 | 0.831296 | 1.808743e-55 | -8.615850e-47 |
Msa0625720 | Msa1367370 | 0.815976 | 7.013054e-52 | -8.615850e-47 |
Msa0626450 | Msa1367370 | 0.834819 | 2.403739e-56 | -8.615850e-47 |
Msa0626490 | Msa1367370 | 0.834367 | 3.122719e-56 | -8.615850e-47 |
Msa0639430 | Msa1367370 | 0.815553 | 8.713704e-52 | -8.615850e-47 |
Msa0647980 | Msa1367370 | 0.822939 | 1.810844e-53 | -8.615850e-47 |
Msa0655560 | Msa1367370 | 0.804371 | 2.231053e-49 | -8.615850e-47 |
Msa0658240 | Msa1367370 | 0.803013 | 4.267901e-49 | -8.615850e-47 |
Msa0658540 | Msa1367370 | 0.808278 | 3.350327e-50 | -8.615850e-47 |
Msa0661790 | Msa1367370 | 0.802083 | 6.638257e-49 | -8.615850e-47 |
Msa0663300 | Msa1367370 | 0.800229 | 1.589473e-48 | -8.615850e-47 |
Msa0663390 | Msa1367370 | 0.810861 | 9.337676e-51 | -8.615850e-47 |
Msa0664060 | Msa1367370 | 0.803784 | 2.954805e-49 | -8.615850e-47 |
Msa0664600 | Msa1367370 | 0.832359 | 9.886015e-56 | -8.615850e-47 |
Msa0669320 | Msa1367370 | 0.806706 | 7.220878e-50 | -8.615850e-47 |
Msa0674580 | Msa1367370 | 0.806657 | 7.396540e-50 | -8.615850e-47 |
Msa0677410 | Msa1367370 | 0.802964 | 4.368853e-49 | -8.615850e-47 |
Msa0682330 | Msa1367370 | 0.818574 | 1.826179e-52 | -8.615850e-47 |
Msa0683570 | Msa1367370 | 0.848343 | 6.510111e-60 | -8.615850e-47 |
Msa0689520 | Msa1367370 | 0.843532 | 1.322367e-58 | -8.615850e-47 |
Msa0691980 | Msa1367370 | 0.810725 | 9.992198e-51 | -8.615850e-47 |
Msa0698770 | Msa1367370 | 0.803938 | 2.744656e-49 | -8.615850e-47 |
Msa0699550 | Msa1367370 | 0.819314 | 1.239682e-52 | -8.615850e-47 |
Msa0730430 | Msa1367370 | 0.807168 | 5.765837e-50 | -8.615850e-47 |
Msa0741240 | Msa1367370 | 0.807336 | 5.313201e-50 | -8.615850e-47 |
Msa0749740 | Msa1367370 | 0.814219 | 1.722402e-51 | -8.615850e-47 |
Msa0754520 | Msa1367370 | 0.852335 | 4.938621e-61 | -8.615850e-47 |
Msa0764830 | Msa1367370 | 0.804365 | 2.237384e-49 | -8.615850e-47 |
Msa0770720 | Msa1367370 | 0.823275 | 1.511729e-53 | -8.615850e-47 |
Msa0785210 | Msa1367370 | 0.812469 | 4.173360e-51 | -8.615850e-47 |
Msa0786500 | Msa1367370 | 0.809140 | 2.192006e-50 | -8.615850e-47 |
Msa0828560 | Msa1367370 | 0.813639 | 2.311808e-51 | -8.615850e-47 |
Msa0833220 | Msa1367370 | 0.849288 | 3.560577e-60 | -8.615850e-47 |
Msa0124060 | Msa1367370 | 0.807950 | 3.934609e-50 | -8.615850e-47 |
Msa0124280 | Msa1367370 | 0.845141 | 4.885122e-59 | -8.615850e-47 |
Msa0126370 | Msa1367370 | 0.805694 | 1.179865e-49 | -8.615850e-47 |
Msa0136650 | Msa1367370 | 0.807180 | 5.733737e-50 | -8.615850e-47 |
Msa0137880 | Msa1367370 | 0.814404 | 1.567560e-51 | -8.615850e-47 |
Msa0139060 | Msa1367370 | 0.801331 | 9.468411e-49 | -8.615850e-47 |
Msa0140780 | Msa1367370 | 0.809125 | 2.208201e-50 | -8.615850e-47 |
Msa0146260 | Msa1367370 | 0.822581 | 2.194282e-53 | -8.615850e-47 |
Msa0148940 | Msa1367370 | 0.805746 | 1.150206e-49 | -8.615850e-47 |
Msa0149370 | Msa1367370 | 0.821319 | 4.300466e-53 | -8.615850e-47 |
Msa0150570 | Msa1367370 | 0.805716 | 1.167359e-49 | -8.615850e-47 |
Msa0152430 | Msa1367370 | 0.805350 | 1.392625e-49 | -8.615850e-47 |
Msa0157290 | Msa1367370 | 0.855002 | 8.448978e-62 | -8.615850e-47 |
Msa0167010 | Msa1367370 | 0.804739 | 1.869121e-49 | -8.615850e-47 |
Msa0168500 | Msa1367370 | 0.817676 | 2.914007e-52 | -8.615850e-47 |
Msa0182240 | Msa1367370 | 0.802789 | 4.749478e-49 | -8.615850e-47 |
Msa0200260 | Msa1367370 | 0.829757 | 4.306408e-55 | -8.615850e-47 |
Msa0211150 | Msa1367370 | 0.800732 | 1.255480e-48 | -8.615850e-47 |
Msa0216910 | Msa1367370 | 0.816783 | 4.628971e-52 | -8.615850e-47 |
Msa0225100 | Msa1367370 | 0.811223 | 7.795072e-51 | -8.615850e-47 |
Msa0225460 | Msa1367370 | 0.849910 | 2.387218e-60 | -8.615850e-47 |
Msa0225680 | Msa1367370 | 0.860881 | 1.515740e-63 | -8.615850e-47 |
Msa0225740 | Msa1367370 | 0.811686 | 6.182230e-51 | -8.615850e-47 |
Msa0225760 | Msa1367370 | 0.816928 | 4.293461e-52 | -8.615850e-47 |
Msa0234600 | Msa1367370 | 0.822881 | 1.868646e-53 | -8.615850e-47 |
Msa1225250 | Msa1367370 | 0.826639 | 2.429173e-54 | -8.615850e-47 |
Msa1225700 | Msa1367370 | 0.827180 | 1.803855e-54 | -8.615850e-47 |
Msa1229500 | Msa1367370 | 0.820855 | 5.502660e-53 | -8.615850e-47 |
Msa1232710 | Msa1367370 | 0.803717 | 3.051414e-49 | -8.615850e-47 |
Msa1236100 | Msa1367370 | 0.818862 | 1.570807e-52 | -8.615850e-47 |
Msa1252190 | Msa1367370 | 0.816433 | 5.543970e-52 | -8.615850e-47 |
Msa1269480 | Msa1367370 | 0.859614 | 3.661221e-63 | -8.615850e-47 |
Msa1270610 | Msa1367370 | 0.810478 | 1.129837e-50 | -8.615850e-47 |
Msa1271990 | Msa1367370 | 0.823344 | 1.456990e-53 | -8.615850e-47 |
Msa1283860 | Msa1367370 | 0.807661 | 4.533178e-50 | -8.615850e-47 |
Msa1284260 | Msa1367370 | 0.805836 | 1.101358e-49 | -8.615850e-47 |
Msa1292830 | Msa1367370 | 0.806087 | 9.754941e-50 | -8.615850e-47 |
Msa1302830 | Msa1367370 | 0.810417 | 1.164674e-50 | -8.615850e-47 |
Msa1306690 | Msa1367370 | 0.802241 | 6.158429e-49 | -8.615850e-47 |
Msa1308380 | Msa1367370 | 0.809937 | 1.478452e-50 | -8.615850e-47 |
Msa1309790 | Msa1367370 | 0.808163 | 3.544344e-50 | -8.615850e-47 |
Msa1313150 | Msa1367370 | 0.805920 | 1.057501e-49 | -8.615850e-47 |
Msa1321340 | Msa1367370 | 0.800489 | 1.406852e-48 | -8.615850e-47 |
Msa1322860 | Msa1367370 | 0.800304 | 1.534746e-48 | -8.615850e-47 |
Msa1327050 | Msa1367370 | 0.801745 | 7.790728e-49 | -8.615850e-47 |
Msa1328710 | Msa1367370 | 0.804841 | 1.779982e-49 | -8.615850e-47 |
Msa0376350 | Msa1367370 | 0.837165 | 6.105515e-57 | -8.615850e-47 |
Msa0379770 | Msa1367370 | 0.837150 | 6.160092e-57 | -8.615850e-47 |
Msa0380210 | Msa1367370 | 0.894281 | 2.858434e-75 | -8.615850e-47 |
Msa0380620 | Msa1367370 | 0.811828 | 5.759872e-51 | -8.615850e-47 |
Msa0386850 | Msa1367370 | 0.801155 | 1.029097e-48 | -8.615850e-47 |
Msa0387510 | Msa1367370 | 0.827650 | 1.391766e-54 | -8.615850e-47 |
Msa0388960 | Msa1367370 | 0.805594 | 1.237990e-49 | -8.615850e-47 |
Msa0392420 | Msa1367370 | 0.817654 | 2.948062e-52 | -8.615850e-47 |
Msa0392460 | Msa1367370 | 0.817671 | 2.922381e-52 | -8.615850e-47 |
Msa0392490 | Msa1367370 | 0.812802 | 3.528873e-51 | -8.615850e-47 |
Msa0392510 | Msa1367370 | 0.804873 | 1.752535e-49 | -8.615850e-47 |
Msa0402650 | Msa1367370 | 0.805244 | 1.465933e-49 | -8.615850e-47 |
Msa0410500 | Msa1367370 | 0.831836 | 1.331654e-55 | -8.615850e-47 |
Msa0410650 | Msa1367370 | 0.846168 | 2.573648e-59 | -8.615850e-47 |
Msa0417270 | Msa1367370 | 0.813204 | 2.880694e-51 | -8.615850e-47 |
Msa0417880 | Msa1367370 | 0.851306 | 9.674100e-61 | -8.615850e-47 |
Msa0419700 | Msa1367370 | 0.805062 | 1.600317e-49 | -8.615850e-47 |
Msa0422850 | Msa1367370 | 0.832121 | 1.132608e-55 | -8.615850e-47 |
Msa0422930 | Msa1367370 | 0.831858 | 1.315549e-55 | -8.615850e-47 |
Msa0424790 | Msa1367370 | 0.841195 | 5.506835e-58 | -8.615850e-47 |
Msa0428150 | Msa1367370 | 0.861034 | 1.362396e-63 | -8.615850e-47 |
Msa0428590 | Msa1367370 | 0.836903 | 7.121800e-57 | -8.615850e-47 |
Msa0430260 | Msa1367370 | 0.820784 | 5.712841e-53 | -8.615850e-47 |
Msa0434350 | Msa1367370 | 0.801125 | 1.043300e-48 | -8.615850e-47 |
Msa0442830 | Msa1367370 | 0.833681 | 4.638792e-56 | -8.615850e-47 |
Msa0450440 | Msa1367370 | 0.808611 | 2.844597e-50 | -8.615850e-47 |
Msa0450720 | Msa1367370 | 0.803739 | 3.019672e-49 | -8.615850e-47 |
Msa0462500 | Msa1367370 | 0.852503 | 4.422767e-61 | -8.615850e-47 |
Msa0464380 | Msa1367370 | 0.806032 | 1.001752e-49 | -8.615850e-47 |
Msa0468290 | Msa1367370 | 0.820900 | 5.371014e-53 | -8.615850e-47 |
Msa0469030 | Msa1367370 | 0.823243 | 1.538362e-53 | -8.615850e-47 |
Msa0474230 | Msa1367370 | 0.801452 | 8.943895e-49 | -8.615850e-47 |
Msa0475790 | Msa1367370 | 0.829849 | 4.090139e-55 | -8.615850e-47 |
Msa0479170 | Msa1367370 | 0.807830 | 4.172554e-50 | -8.615850e-47 |
Msa0480220 | Msa1367370 | 0.809978 | 1.448213e-50 | -8.615850e-47 |
Msa0481530 | Msa1367370 | 0.805544 | 1.268490e-49 | -8.615850e-47 |
Msa0979730 | Msa1367370 | 0.801054 | 1.078845e-48 | -8.615850e-47 |
Msa0980310 | Msa1367370 | 0.801573 | 8.446446e-49 | -8.615850e-47 |
Msa0981950 | Msa1367370 | 0.826517 | 2.597932e-54 | -8.615850e-47 |
Msa1003750 | Msa1367370 | 0.806328 | 8.678666e-50 | -8.615850e-47 |
Msa1018690 | Msa1367370 | 0.813311 | 2.729004e-51 | -8.615850e-47 |
Msa1019000 | Msa1367370 | 0.809352 | 1.974663e-50 | -8.615850e-47 |
Msa1019430 | Msa1367370 | 0.817017 | 4.100835e-52 | -8.615850e-47 |
Msa1019470 | Msa1367370 | 0.839978 | 1.146594e-57 | -8.615850e-47 |
Msa1020560 | Msa1367370 | 0.819699 | 1.012677e-52 | -8.615850e-47 |
Msa1020670 | Msa1367370 | 0.836796 | 7.586099e-57 | -8.615850e-47 |
Msa1021210 | Msa1367370 | 0.806456 | 8.153760e-50 | -8.615850e-47 |
Msa1029250 | Msa1367370 | 0.824635 | 7.255464e-54 | -8.615850e-47 |
Msa1051830 | Msa1367370 | 0.827605 | 1.426212e-54 | -8.615850e-47 |
Msa1084960 | Msa1367370 | 0.823612 | 1.261277e-53 | -8.615850e-47 |
Msa1085200 | Msa1367370 | 0.840938 | 6.430158e-58 | -8.615850e-47 |
Msa1091520 | Msa1367370 | 0.802128 | 6.499679e-49 | -8.615850e-47 |
Msa1092010 | Msa1367370 | 0.803029 | 4.235607e-49 | -8.615850e-47 |
Msa1096970 | Msa1367370 | 0.813400 | 2.609808e-51 | -8.615850e-47 |
Msa1097980 | Msa1367370 | 0.823216 | 1.560503e-53 | -8.615850e-47 |
Msa1106700 | Msa1367370 | 0.808514 | 2.983421e-50 | -8.615850e-47 |
Msa0240110 | Msa1367370 | 0.808655 | 2.784366e-50 | -8.615850e-47 |
Msa0240150 | Msa1367370 | 0.802000 | 6.905675e-49 | -8.615850e-47 |
Msa0243100 | Msa1367370 | 0.840826 | 6.881037e-58 | -8.615850e-47 |
Msa0244860 | Msa1367370 | 0.804162 | 2.466252e-49 | -8.615850e-47 |
Msa0248970 | Msa1367370 | 0.822358 | 2.472223e-53 | -8.615850e-47 |
Msa0255090 | Msa1367370 | 0.831696 | 1.441757e-55 | -8.615850e-47 |
Msa0256780 | Msa1367370 | 0.804342 | 2.261864e-49 | -8.615850e-47 |
Msa0259380 | Msa1367370 | 0.838461 | 2.836061e-57 | -8.615850e-47 |
Msa0260610 | Msa1367370 | 0.829417 | 5.207991e-55 | -8.615850e-47 |
Msa0260670 | Msa1367370 | 0.834290 | 3.264836e-56 | -8.615850e-47 |
Msa0261340 | Msa1367370 | 0.837177 | 6.062711e-57 | -8.615850e-47 |
Msa0264040 | Msa1367370 | 0.820623 | 6.219495e-53 | -8.615850e-47 |
Msa0264870 | Msa1367370 | 0.813641 | 2.309905e-51 | -8.615850e-47 |
Msa0267110 | Msa1367370 | 0.828332 | 9.537009e-55 | -8.615850e-47 |
Msa0277180 | Msa1367370 | 0.807072 | 6.043538e-50 | -8.615850e-47 |
Msa0283450 | Msa1367370 | 0.816179 | 6.319475e-52 | -8.615850e-47 |
Msa0283520 | Msa1367370 | 0.812198 | 4.783907e-51 | -8.615850e-47 |
Msa0287650 | Msa1367370 | 0.820911 | 5.339282e-53 | -8.615850e-47 |
Msa0287740 | Msa1367370 | 0.814314 | 1.641297e-51 | -8.615850e-47 |
Msa0288680 | Msa1367370 | 0.805277 | 1.442667e-49 | -8.615850e-47 |
Msa0288890 | Msa1367370 | 0.816484 | 5.400538e-52 | -8.615850e-47 |
Msa0292330 | Msa1367370 | 0.801651 | 8.144037e-49 | -8.615850e-47 |
Msa0292400 | Msa1367370 | 0.840875 | 6.681526e-58 | -8.615850e-47 |
Msa0294160 | Msa1367370 | 0.806938 | 6.449324e-50 | -8.615850e-47 |
Msa0295070 | Msa1367370 | 0.822745 | 2.010061e-53 | -8.615850e-47 |
Msa0297740 | Msa1367370 | 0.817473 | 3.238893e-52 | -8.615850e-47 |
Msa0297930 | Msa1367370 | 0.811742 | 6.012459e-51 | -8.615850e-47 |
Msa0300690 | Msa1367370 | 0.810876 | 9.266320e-51 | -8.615850e-47 |
Msa0302000 | Msa1367370 | 0.812620 | 3.868025e-51 | -8.615850e-47 |
Msa0308830 | Msa1367370 | 0.801061 | 1.075652e-48 | -8.615850e-47 |
Msa0311280 | Msa1367370 | 0.810771 | 9.764983e-51 | -8.615850e-47 |
Msa0313410 | Msa1367370 | 0.807273 | 5.478900e-50 | -8.615850e-47 |
Msa0314340 | Msa1367370 | 0.843731 | 1.169879e-58 | -8.615850e-47 |
Msa0316810 | Msa1367370 | 0.802351 | 5.846878e-49 | -8.615850e-47 |
Msa0332000 | Msa1367370 | 0.817304 | 3.534602e-52 | -8.615850e-47 |
Msa0335870 | Msa1367370 | 0.813225 | 2.850595e-51 | -8.615850e-47 |
Msa0338210 | Msa1367370 | 0.808619 | 2.833007e-50 | -8.615850e-47 |
Msa0340090 | Msa1367370 | 0.808981 | 2.370484e-50 | -8.615850e-47 |
Msa0341050 | Msa1367370 | 0.803916 | 2.774144e-49 | -8.615850e-47 |
Msa0344570 | Msa1367370 | 0.801542 | 8.574160e-49 | -8.615850e-47 |
Msa0349080 | Msa1367370 | 0.809855 | 1.539319e-50 | -8.615850e-47 |
Msa0349710 | Msa1367370 | 0.806723 | 7.161486e-50 | -8.615850e-47 |
Msa0363070 | Msa1367370 | 0.804106 | 2.532391e-49 | -8.615850e-47 |
Msa0363200 | Msa1367370 | 0.821967 | 3.046360e-53 | -8.615850e-47 |
Msa1111090 | Msa1367370 | 0.821437 | 4.038810e-53 | -8.615850e-47 |
Msa1111110 | Msa1367370 | 0.814005 | 1.920387e-51 | -8.615850e-47 |
Msa1111130 | Msa1367370 | 0.818796 | 1.625478e-52 | -8.615850e-47 |
Msa1113340 | Msa1367370 | 0.803479 | 3.417802e-49 | -8.615850e-47 |
Msa1140210 | Msa1367370 | 0.851871 | 6.690262e-61 | -8.615850e-47 |
Msa1144390 | Msa1367370 | 0.800865 | 1.179122e-48 | -8.615850e-47 |
Msa1151910 | Msa1367370 | 0.840400 | 8.893850e-58 | -8.615850e-47 |
Msa1154710 | Msa1367370 | 0.807063 | 6.069969e-50 | -8.615850e-47 |
Msa1172450 | Msa1367370 | 0.808283 | 3.342707e-50 | -8.615850e-47 |
Msa1179940 | Msa1367370 | 0.807541 | 4.807674e-50 | -8.615850e-47 |
Msa1183120 | Msa1367370 | 0.811517 | 6.730703e-51 | -8.615850e-47 |
Msa1201470 | Msa1367370 | 0.804698 | 1.906295e-49 | -8.615850e-47 |
Msa1209460 | Msa1367370 | 0.846270 | 2.412770e-59 | -8.615850e-47 |
Msa1222850 | Msa1367370 | 0.817020 | 4.093624e-52 | -8.615850e-47 |
Msa1223470 | Msa1367370 | 0.867642 | 1.177353e-65 | -8.615850e-47 |
Msa0487570 | Msa1367370 | 0.818787 | 1.633832e-52 | -8.615850e-47 |
Msa0487630 | Msa1367370 | 0.823708 | 1.197486e-53 | -8.615850e-47 |
Msa0490390 | Msa1367370 | 0.803837 | 2.880571e-49 | -8.615850e-47 |
Msa0498060 | Msa1367370 | 0.813056 | 3.104662e-51 | -8.615850e-47 |
Msa0507680 | Msa1367370 | 0.854440 | 1.228971e-61 | -8.615850e-47 |
Msa0509610 | Msa1367370 | 0.832045 | 1.182386e-55 | -8.615850e-47 |
Msa0510980 | Msa1367370 | 0.830743 | 2.473449e-55 | -8.615850e-47 |
Msa0516170 | Msa1367370 | 0.818079 | 2.363387e-52 | -8.615850e-47 |
Msa0518690 | Msa1367370 | 0.820790 | 5.694229e-53 | -8.615850e-47 |
Msa0520890 | Msa1367370 | 0.801494 | 8.770833e-49 | -8.615850e-47 |
Msa0524190 | Msa1367370 | 0.996769 | 5.621446e-232 | -8.615850e-47 |
Msa0527700 | Msa1367370 | 0.806262 | 8.958595e-50 | -8.615850e-47 |
Msa0527860 | Msa1367370 | 0.824198 | 9.189597e-54 | -8.615850e-47 |
Msa0529890 | Msa1367370 | 0.813721 | 2.217367e-51 | -8.615850e-47 |
Msa0532070 | Msa1367370 | 0.823561 | 1.295982e-53 | -8.615850e-47 |
Msa0546680 | Msa1367370 | 0.838227 | 3.260041e-57 | -8.615850e-47 |
Msa0569200 | Msa1367370 | 0.835601 | 1.525949e-56 | -8.615850e-47 |
Msa0574890 | Msa1367370 | 0.840541 | 8.172771e-58 | -8.615850e-47 |
Msa0576880 | Msa1367370 | 0.806412 | 8.330160e-50 | -8.615850e-47 |
Msa0582450 | Msa1367370 | 0.809845 | 1.547268e-50 | -8.615850e-47 |
Msa0585560 | Msa1367370 | 0.806181 | 9.318560e-50 | -8.615850e-47 |
Msa0586190 | Msa1367370 | 0.810846 | 9.406353e-51 | -8.615850e-47 |
Msa0594310 | Msa1367370 | 0.803298 | 3.727289e-49 | -8.615850e-47 |
Msa0844570 | Msa1367370 | 0.806075 | 9.808667e-50 | -8.615850e-47 |
Msa0861870 | Msa1367370 | 0.808975 | 2.377592e-50 | -8.615850e-47 |
Msa0863010 | Msa1367370 | 0.800581 | 1.347720e-48 | -8.615850e-47 |
Msa0869780 | Msa1367370 | 0.823129 | 1.635640e-53 | -8.615850e-47 |
Msa0872830 | Msa1367370 | 0.820667 | 6.076825e-53 | -8.615850e-47 |
Msa0873220 | Msa1367370 | 0.810074 | 1.381075e-50 | -8.615850e-47 |
Msa0880140 | Msa1367370 | 0.851252 | 1.001508e-60 | -8.615850e-47 |
Msa0906610 | Msa1367370 | 0.804891 | 1.737882e-49 | -8.615850e-47 |
Msa0925180 | Msa1367370 | 0.818786 | 1.634454e-52 | -8.615850e-47 |
Msa0930780 | Msa1367370 | 0.812677 | 3.759642e-51 | -8.615850e-47 |
Msa0938480 | Msa1367370 | 0.829408 | 5.234950e-55 | -8.615850e-47 |
Msa0944030 | Msa1367370 | 0.811984 | 5.325603e-51 | -8.615850e-47 |
Msa0945110 | Msa1367370 | 0.854052 | 1.590598e-61 | -8.615850e-47 |
Msa0948290 | Msa1367370 | 0.810951 | 8.927699e-51 | -8.615850e-47 |
Msa0966400 | Msa1367370 | 0.800688 | 1.281602e-48 | -8.615850e-47 |
Msa0967870 | Msa1367370 | 0.802932 | 4.436462e-49 | -8.615850e-47 |
Msa0975640 | Msa1367370 | 0.819686 | 1.019439e-52 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1367370 | MtrunA17_Chr3g0145461 | 99.302 | 573 | 4 | 0 | 4 | 576 | 2 | 574 | 0.0 | 1186 |
Msa1367370 | MtrunA17_Chr1g0200341 | 73.545 | 567 | 131 | 7 | 14 | 575 | 2 | 554 | 0.0 | 876 |
Msa1367370 | MtrunA17_Chr1g0200331 | 68.959 | 567 | 143 | 6 | 11 | 575 | 17 | 552 | 0.0 | 811 |
Msa1367370 | MtrunA17_Chr4g0038561 | 78.178 | 472 | 102 | 1 | 102 | 573 | 40 | 510 | 0.0 | 785 |
Msa1367370 | MtrunA17_Chr8g0383361 | 55.354 | 495 | 215 | 2 | 80 | 568 | 132 | 626 | 0.0 | 585 |
Msa1367370 | MtrunA17_Chr7g0271621 | 57.269 | 454 | 191 | 1 | 113 | 563 | 166 | 619 | 0.0 | 567 |
Msa1367370 | MtrunA17_Chr4g0068901 | 56.522 | 460 | 194 | 2 | 110 | 563 | 181 | 640 | 0.0 | 566 |
Msa1367370 | MtrunA17_Chr1g0192991 | 56.455 | 457 | 195 | 2 | 113 | 565 | 113 | 569 | 0.0 | 558 |
Msa1367370 | MtrunA17_Chr3g0082721 | 53.939 | 165 | 76 | 0 | 302 | 466 | 2 | 166 | 2.80e-65 | 210 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1367370 | AT4G34860.2 | 79.292 | 565 | 109 | 5 | 14 | 575 | 11 | 570 | 0.0 | 941 |
Msa1367370 | AT4G34860.1 | 79.292 | 565 | 109 | 5 | 14 | 575 | 11 | 570 | 0.0 | 941 |
Msa1367370 | AT4G34860.3 | 79.292 | 565 | 109 | 5 | 14 | 575 | 11 | 570 | 0.0 | 941 |
Msa1367370 | AT4G09510.1 | 73.571 | 560 | 132 | 4 | 19 | 575 | 11 | 557 | 0.0 | 876 |
Msa1367370 | AT1G22650.1 | 72.906 | 561 | 121 | 7 | 19 | 575 | 1 | 534 | 0.0 | 846 |
Msa1367370 | AT1G35580.2 | 71.301 | 561 | 140 | 5 | 18 | 574 | 5 | 548 | 0.0 | 838 |
Msa1367370 | AT1G35580.1 | 71.301 | 561 | 140 | 5 | 18 | 574 | 5 | 548 | 0.0 | 838 |
Msa1367370 | AT1G72000.1 | 77.126 | 494 | 108 | 3 | 86 | 575 | 7 | 499 | 0.0 | 814 |
Msa1367370 | AT4G09510.2 | 73.810 | 462 | 106 | 3 | 19 | 477 | 11 | 460 | 0.0 | 725 |
Msa1367370 | AT1G35580.3 | 71.002 | 469 | 116 | 4 | 18 | 482 | 5 | 457 | 0.0 | 696 |
Msa1367370 | AT1G22650.2 | 71.277 | 470 | 105 | 6 | 19 | 484 | 1 | 444 | 0.0 | 689 |
Msa1367370 | AT5G22510.2 | 51.337 | 561 | 240 | 5 | 11 | 565 | 59 | 592 | 0.0 | 587 |
Msa1367370 | AT5G22510.1 | 51.337 | 561 | 240 | 5 | 11 | 565 | 59 | 592 | 0.0 | 587 |
Msa1367370 | AT1G56560.1 | 51.908 | 524 | 234 | 5 | 59 | 565 | 68 | 590 | 0.0 | 574 |
Msa1367370 | AT3G06500.1 | 53.170 | 489 | 220 | 3 | 81 | 563 | 153 | 638 | 0.0 | 551 |
Msa1367370 | AT3G05820.2 | 55.142 | 457 | 199 | 3 | 113 | 563 | 150 | 606 | 0.0 | 545 |
Msa1367370 | AT3G06500.2 | 54.082 | 392 | 175 | 1 | 177 | 563 | 48 | 439 | 7.30e-161 | 468 |
Msa1367370 | AT3G05820.1 | 56.111 | 360 | 152 | 3 | 113 | 466 | 150 | 509 | 1.73e-146 | 432 |
Find 155 sgRNAs with CRISPR-Local
Find 286 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCCTGTTGATTCTGGATTT+TGG | 0.107168 | tig0018513:-55392 | Msa1367370:CDS |
CTTGATGATCCTTCACATTT+AGG | 0.135844 | tig0018513:-53698 | Msa1367370:CDS |
TTATGATTTCAGGGTGTTTA+TGG | 0.137912 | tig0018513:-54887 | Msa1367370:intron |
CATCATGGCGGATACTTTAT+TGG | 0.172811 | tig0018513:-54593 | Msa1367370:CDS |
CTCATTTCATTCATATAAAA+AGG | 0.185980 | tig0018513:+53188 | None:intergenic |
CAACTAAAGTATATATTAAA+AGG | 0.216045 | tig0018513:+53087 | None:intergenic |
CTGGTCTATTGCTGGTTATT+TGG | 0.241651 | tig0018513:-53735 | Msa1367370:CDS |
TGAACAGTCAGTTGCAATTA+TGG | 0.252442 | tig0018513:-54489 | Msa1367370:CDS |
TTTGACTTGCAATGATAAAA+AGG | 0.254816 | tig0018513:-53579 | Msa1367370:three_prime_UTR |
GAAACCTTGATAGCAGATTT+TGG | 0.254882 | tig0018513:-55438 | Msa1367370:CDS |
TGCTGAAGGGAAAGAGTTTA+TGG | 0.259291 | tig0018513:-54795 | Msa1367370:CDS |
CAGGAACAGCTTGCAGTTCT+TGG | 0.261482 | tig0018513:-53357 | Msa1367370:three_prime_UTR |
TCACGGTGGGAAGAATTAAT+TGG | 0.263132 | tig0018513:-54455 | Msa1367370:CDS |
TCATATCAAATCCCAATAAA+AGG | 0.283068 | tig0018513:+53135 | None:intergenic |
AGGGTTGCTCCTGTTGATTC+TGG | 0.284587 | tig0018513:-55399 | Msa1367370:CDS |
AATTCAAGCATTGTTCTTCA+TGG | 0.292043 | tig0018513:-54852 | Msa1367370:CDS |
CCAATAAAAGGTAAAATAGA+AGG | 0.314414 | tig0018513:+53147 | None:intergenic |
AACTCTTTCCCTTCAGCATC+TGG | 0.317968 | tig0018513:+54800 | None:intergenic |
CTCTCAATGTTCAAAGTCCT+TGG | 0.321428 | tig0018513:+56146 | None:intergenic |
ATCATATGAGAAGCCACTTT+TGG | 0.334217 | tig0018513:-54739 | Msa1367370:CDS |
ATCATGGCGGATACTTTATT+GGG | 0.335197 | tig0018513:-54592 | Msa1367370:CDS |
GAAACCAATGGTTCGTTATC+AGG | 0.336858 | tig0018513:-53376 | Msa1367370:three_prime_UTR |
AACAATGCTTGAATTTCAAT+TGG | 0.347066 | tig0018513:+54860 | None:intergenic |
AGAAAATTCTTAACAATGTC+TGG | 0.354613 | tig0018513:+55573 | None:intergenic |
TGGTGGTTACAGTTATGTTA+TGG | 0.354882 | tig0018513:-53913 | Msa1367370:intron |
TTACAATTAGATTGAAATTA+CGG | 0.355244 | tig0018513:-53300 | Msa1367370:three_prime_UTR |
TACTCCAAGATCACTGCTAT+TGG | 0.358290 | tig0018513:-55979 | Msa1367370:CDS |
CCTGAGAGCTTCCCAAGCTT+CGG | 0.362174 | tig0018513:+55938 | None:intergenic |
TTCCCGATTCTTTACCAGAT+TGG | 0.363867 | tig0018513:-54634 | Msa1367370:CDS |
TGCTCAAGAGATCAAATTCA+TGG | 0.367029 | tig0018513:-53634 | Msa1367370:CDS |
TCTGCGGCGGCTATCAAGAC+TGG | 0.369898 | tig0018513:-53884 | Msa1367370:CDS |
CTGAGAGCTTCCCAAGCTTC+GGG | 0.371080 | tig0018513:+55939 | None:intergenic |
CGCGGTTTCTGACCGGATCA+TGG | 0.375080 | tig0018513:+55460 | None:intergenic |
ACCTCACAGCAAGAAAAGTA+TGG | 0.385720 | tig0018513:+57217 | None:intergenic |
CACGGTGGGAAGAATTAATT+GGG | 0.386404 | tig0018513:-54454 | Msa1367370:CDS |
TGCCAAACCTGGTCTATTGC+TGG | 0.394176 | tig0018513:-53743 | Msa1367370:CDS |
TTCACCAAAATCTGCTATCA+AGG | 0.396923 | tig0018513:+55434 | None:intergenic |
AAAGATTGATAGGTTTCATC+TGG | 0.409232 | tig0018513:-55517 | Msa1367370:CDS |
AGGCTTATCTCCACGTCTAT+TGG | 0.412169 | tig0018513:-56081 | Msa1367370:CDS |
CCGAAGCTTGGGAAGCTCTC+AGG | 0.414554 | tig0018513:-55938 | Msa1367370:CDS |
AGTTGGAACAATTGCTGCCT+TGG | 0.417688 | tig0018513:-55886 | Msa1367370:CDS |
TGCAAGTGCTAAGATATTGC+TGG | 0.418440 | tig0018513:-56298 | Msa1367370:five_prime_UTR |
TGTGTTCCGTCATAATATTC+CGG | 0.421532 | tig0018513:+53797 | None:intergenic |
CATGAATGGAGGATCATAAC+AGG | 0.421806 | tig0018513:-54392 | Msa1367370:CDS |
AATCCAATCTGGTAAAGAAT+CGG | 0.424424 | tig0018513:+54631 | None:intergenic |
CTAGATGGAGTTACCACAAT+GGG | 0.425352 | tig0018513:-54352 | Msa1367370:CDS |
AGACTCTTCGTCTTCAATCA+TGG | 0.427851 | tig0018513:-55545 | Msa1367370:CDS |
AACCAGCAATAGACCAGGTT+TGG | 0.430273 | tig0018513:+53741 | None:intergenic |
AGACTTTGTTCCAAGTGCTC+TGG | 0.430586 | tig0018513:-55616 | Msa1367370:CDS |
TCAATGAGTGAACTATCAAT+AGG | 0.444042 | tig0018513:-56101 | Msa1367370:CDS |
TTGCTGGTTATTTGGTGGCT+AGG | 0.446100 | tig0018513:-53727 | Msa1367370:CDS |
GGAAGCTCTCAGGCGTTCCT+TGG | 0.449024 | tig0018513:-55928 | Msa1367370:CDS |
AAGGCAGCAATTGTTCCAAC+TGG | 0.455491 | tig0018513:+55888 | None:intergenic |
ATCTGGCCTCAGCAATTTGA+AGG | 0.457938 | tig0018513:+53837 | None:intergenic |
CCAACTTTACTATGTGCTGA+TGG | 0.459852 | tig0018513:-55243 | Msa1367370:CDS |
TTGTGATGAGACCAATCTAT+TGG | 0.463367 | tig0018513:+56254 | None:intergenic |
GTCTATTGCTGGTTATTTGG+TGG | 0.465320 | tig0018513:-53732 | Msa1367370:CDS |
ATGTAGTGTCGCAGAATTTG+AGG | 0.466289 | tig0018513:-56198 | Msa1367370:CDS |
TGGTCTCATCACAATGGTAA+TGG | 0.469382 | tig0018513:-56245 | Msa1367370:CDS |
CTTGACAACTTCCCTCGCCT+TGG | 0.469584 | tig0018513:-56050 | Msa1367370:CDS |
AGATTTGTGCACGGGAGAAA+AGG | 0.470250 | tig0018513:+56010 | None:intergenic |
CCATCAGCACATAGTAAAGT+TGG | 0.473576 | tig0018513:+55243 | None:intergenic |
TTGGTGAAAGTGCAATAGGC+AGG | 0.474019 | tig0018513:-55419 | Msa1367370:CDS |
CTTTATTGGGAATGTGAGTC+CGG | 0.474021 | tig0018513:-54579 | Msa1367370:CDS |
TGACCAGCCTGAATGTCAAA+AGG | 0.475180 | tig0018513:-55316 | Msa1367370:CDS |
CCAATCTATTGGAGGGGTAG+AGG | 0.476513 | tig0018513:+56265 | None:intergenic |
GAGTCCAATAGCAGTGATCT+TGG | 0.477827 | tig0018513:+55975 | None:intergenic |
CACCAAAATCCAGAATCAAC+AGG | 0.478739 | tig0018513:+55390 | None:intergenic |
CTGAGTTTATGCTTGTCAGA+GGG | 0.479869 | tig0018513:-55279 | Msa1367370:CDS |
GGAACACATGGTCGATACAT+TGG | 0.481896 | tig0018513:-53782 | Msa1367370:CDS |
AAGGTTTCGCGGTTTCTGAC+CGG | 0.483631 | tig0018513:+55453 | None:intergenic |
ATCCAATCTGGTAAAGAATC+GGG | 0.484985 | tig0018513:+54632 | None:intergenic |
GCTTCAAATCCAACCAAAAG+TGG | 0.485151 | tig0018513:+54726 | None:intergenic |
GAACAGCTTGCAGTTCTTGG+TGG | 0.485168 | tig0018513:-53354 | Msa1367370:three_prime_UTR |
TGGTCGATACATTGGGAAGC+AGG | 0.486411 | tig0018513:-53774 | Msa1367370:CDS |
GACTCTTCGTCTTCAATCAT+GGG | 0.486513 | tig0018513:-55544 | Msa1367370:CDS |
CTGTTCAGGAGTTGCCAAGC+AGG | 0.494417 | tig0018513:+54505 | None:intergenic |
CCAGATTGCTAAAAGACAAC+TGG | 0.494499 | tig0018513:-53820 | Msa1367370:CDS |
GCTTCTCATATGATAGCTTA+AGG | 0.495719 | tig0018513:+54748 | None:intergenic |
CAACTTTACTATGTGCTGAT+GGG | 0.495887 | tig0018513:-55242 | Msa1367370:CDS |
GAACACATGGTCGATACATT+GGG | 0.500723 | tig0018513:-53781 | Msa1367370:CDS |
TGAAGAAGACCGACAGCTAA+AGG | 0.501224 | tig0018513:-53663 | Msa1367370:CDS |
GTGTTTGCGTATTCCTTCAG+TGG | 0.502240 | tig0018513:-53476 | Msa1367370:three_prime_UTR |
CGGCTAGGATGGATTTCCGC+TGG | 0.506123 | tig0018513:-54559 | Msa1367370:CDS |
ATAATTGCAACTGACTGTTC+AGG | 0.506227 | tig0018513:+54491 | None:intergenic |
CCTCTACCCCTCCAATAGAT+TGG | 0.506254 | tig0018513:-56265 | Msa1367370:CDS |
GCTTGCAGTTCTTGGTGGAC+TGG | 0.508414 | tig0018513:-53349 | Msa1367370:three_prime_UTR |
TGAGAATCTTAATTATGATC+AGG | 0.512681 | tig0018513:-55853 | Msa1367370:intron |
TGTTCCTGATAACGAACCAT+TGG | 0.515177 | tig0018513:+53372 | None:intergenic |
GAATTTGATCTCTTGAGCAC+AGG | 0.520613 | tig0018513:+53638 | None:intergenic |
TGGAATACCTTAAAACTAGC+AGG | 0.523302 | tig0018513:+55480 | None:intergenic |
GAATGTGAGTCCGGCTAGGA+TGG | 0.524824 | tig0018513:-54570 | Msa1367370:CDS |
GAATATTATGACGGAACACA+TGG | 0.527626 | tig0018513:-53794 | Msa1367370:CDS |
TTTGATTTCATGCCTCATCA+TGG | 0.529497 | tig0018513:-54608 | Msa1367370:CDS |
CAGCCCTTGAAAATCATGAA+TGG | 0.529947 | tig0018513:-54406 | Msa1367370:CDS |
TAGCTTCACATTTCGTGATG+TGG | 0.535028 | tig0018513:+53237 | None:intergenic |
CTGCGGCGGCTATCAAGACT+GGG | 0.535342 | tig0018513:-53883 | Msa1367370:CDS |
GAAGTAAGAAATGTAGTGAG+TGG | 0.535916 | tig0018513:-53554 | Msa1367370:three_prime_UTR |
TCTGAGTTTATGCTTGTCAG+AGG | 0.536420 | tig0018513:-55280 | Msa1367370:CDS |
CGTGCATACACAAAATCTAC+AGG | 0.544504 | tig0018513:-55354 | Msa1367370:CDS |
AGGCTCGAAAATGCCAAACC+TGG | 0.550502 | tig0018513:-53754 | Msa1367370:CDS |
GATAGGTTTCATCTGGCAGA+AGG | 0.553855 | tig0018513:-55510 | Msa1367370:CDS |
TTAAGACCAGATTTGTGCAC+GGG | 0.557462 | tig0018513:+56002 | None:intergenic |
GCTGGATAACAAACTTTGAC+AGG | 0.557935 | tig0018513:+54425 | None:intergenic |
GCACAGGATCCTTTAGCTGT+CGG | 0.560516 | tig0018513:+53654 | None:intergenic |
ACTTATGAGCATTCCACTGA+AGG | 0.564041 | tig0018513:+53463 | None:intergenic |
TTGCTTAAGCCAGATGCTGA+AGG | 0.566251 | tig0018513:-54809 | Msa1367370:CDS |
TTGGGAATGTGAGTCCGGCT+AGG | 0.569278 | tig0018513:-54574 | Msa1367370:CDS |
AATCTGCTATCAAGGTTTCG+CGG | 0.570404 | tig0018513:+55442 | None:intergenic |
GATGAGACCAATCTATTGGA+GGG | 0.575783 | tig0018513:+56258 | None:intergenic |
GACCAGCCTGAATGTCAAAA+GGG | 0.576127 | tig0018513:-55315 | Msa1367370:CDS |
TATGCACAAGGTGAAACCAA+TGG | 0.579457 | tig0018513:-53388 | Msa1367370:three_prime_UTR |
TGATGAGACCAATCTATTGG+AGG | 0.580435 | tig0018513:+56257 | None:intergenic |
TGAGTTTATGCTTGTCAGAG+GGG | 0.580700 | tig0018513:-55278 | Msa1367370:CDS |
ATCTGGCTTAAGCAATAGCA+TGG | 0.582923 | tig0018513:+54817 | None:intergenic |
CTGTATGATTGATCGTAGAA+TGG | 0.588231 | tig0018513:-55217 | Msa1367370:intron |
ATAGGTTTCATCTGGCAGAA+GGG | 0.588613 | tig0018513:-55509 | Msa1367370:CDS |
CTAAAGTATTAGATAAGCCA+AGG | 0.589167 | tig0018513:-56163 | Msa1367370:CDS |
CAGCGGAAATCCATCCTAGC+CGG | 0.590490 | tig0018513:+54560 | None:intergenic |
GCTATAATACCTAAATGTGA+AGG | 0.591073 | tig0018513:+53689 | None:intergenic |
CAATAAAAGGTAAAATAGAA+GGG | 0.591260 | tig0018513:+53148 | None:intergenic |
TAGGTTTCATCTGGCAGAAG+GGG | 0.591697 | tig0018513:-55508 | Msa1367370:CDS |
TGCTTAAGCCAGATGCTGAA+GGG | 0.597457 | tig0018513:-54808 | Msa1367370:CDS |
CAAGATGTTCTCCAAGGCGA+GGG | 0.604363 | tig0018513:+56039 | None:intergenic |
CCCTTGAAAATCATGAATGG+AGG | 0.605532 | tig0018513:-54403 | Msa1367370:CDS |
ATAAAGTATCCGCCATGATG+AGG | 0.605960 | tig0018513:+54596 | None:intergenic |
TGGTGAAAGTGCAATAGGCA+GGG | 0.613958 | tig0018513:-55418 | Msa1367370:CDS |
TCAAGATGTTCTCCAAGGCG+AGG | 0.629033 | tig0018513:+56038 | None:intergenic |
ATTAAGACCAGATTTGTGCA+CGG | 0.631492 | tig0018513:+56001 | None:intergenic |
ATTGCAAGTCAAAATTGATG+AGG | 0.632767 | tig0018513:+53589 | None:intergenic |
GTAGTGAGTGGAAGAATGTG+TGG | 0.637024 | tig0018513:-53542 | Msa1367370:three_prime_UTR |
ATTGCTAAAAGACAACTGGC+CGG | 0.640390 | tig0018513:-53816 | Msa1367370:CDS |
ATACGCAAACACTAGACATG+TGG | 0.642445 | tig0018513:+53487 | None:intergenic |
AACTGGCCGGAATATTATGA+CGG | 0.645214 | tig0018513:-53803 | Msa1367370:CDS |
CAAATAACCAGCAATAGACC+AGG | 0.645389 | tig0018513:+53736 | None:intergenic |
GGATCTCATAGAATCACGGT+GGG | 0.649862 | tig0018513:-54468 | Msa1367370:CDS |
TAAAAGGTAAAATAGAAGGG+TGG | 0.651885 | tig0018513:+53151 | None:intergenic |
CATGATCAAGATGTTCTCCA+AGG | 0.652753 | tig0018513:+56033 | None:intergenic |
ATTCTCATCAGAATTGTCCA+AGG | 0.653274 | tig0018513:+55869 | None:intergenic |
TTATGGATCTCATAGAATCA+CGG | 0.654471 | tig0018513:-54472 | Msa1367370:CDS |
TCTGGCCTCAGCAATTTGAA+GGG | 0.657188 | tig0018513:+53838 | None:intergenic |
TGAAACAGAATGATTCATGA+CGG | 0.658315 | tig0018513:+53512 | None:intergenic |
ACGTGCCCTTCAAATTGCTG+AGG | 0.658820 | tig0018513:-53843 | Msa1367370:CDS |
GATTTCATGCCTCATCATGG+CGG | 0.677929 | tig0018513:-54605 | Msa1367370:CDS |
ACTAGATGGAGTTACCACAA+TGG | 0.679491 | tig0018513:-54353 | Msa1367370:CDS |
ATGAGACCAATCTATTGGAG+GGG | 0.687920 | tig0018513:+56259 | None:intergenic |
AAATTGCTATGCAATTACCA+AGG | 0.691776 | tig0018513:+54531 | None:intergenic |
ATAGATTGGTCTCATCACAA+TGG | 0.702971 | tig0018513:-56251 | Msa1367370:CDS |
TAGATGGAGTTACCACAATG+GGG | 0.708965 | tig0018513:-54351 | Msa1367370:CDS |
AATCACAATCACAATTCACG+AGG | 0.714083 | tig0018513:-57281 | Msa1367370:five_prime_UTR |
TGGATCTCATAGAATCACGG+TGG | 0.714752 | tig0018513:-54469 | Msa1367370:CDS |
AGATGGAGTTACCACAATGG+GGG | 0.717268 | tig0018513:-54350 | Msa1367370:CDS |
AATTACCAAGGCAAAACCAG+CGG | 0.718732 | tig0018513:+54543 | None:intergenic |
TTCACCACGAAAATGTACCA+AGG | 0.730398 | tig0018513:+55911 | None:intergenic |
ACGGTGGGAAGAATTAATTG+GGG | 0.783541 | tig0018513:-54453 | Msa1367370:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTTTTAATTTTTTTAA+TGG | - | tig0018513:54567-54586 | Msa1367370:CDS | 0.0% |
!! | TTTCTTATATATATAATTCT+AGG | - | tig0018513:53580-53599 | Msa1367370:three_prime_UTR | 10.0% |
!! | TTCTTATATATATAATTCTA+GGG | - | tig0018513:53581-53600 | Msa1367370:three_prime_UTR | 10.0% |
!! | TATTTATAATTTATGATTTC+AGG | - | tig0018513:55453-55472 | Msa1367370:CDS | 10.0% |
!! | ATTTATAATTTATGATTTCA+GGG | - | tig0018513:55454-55473 | Msa1367370:CDS | 10.0% |
!!! | CTTTTTTTTTTTTTTTTTTC+TGG | + | tig0018513:56350-56369 | None:intergenic | 10.0% |
!! | AAAGAAAGATAATTAAATCT+GGG | + | tig0018513:53484-53503 | None:intergenic | 15.0% |
!! | AAAAGAAAGATAATTAAATC+TGG | + | tig0018513:53485-53504 | None:intergenic | 15.0% |
!! | TGATATAAATTTACAAAGTT+GGG | + | tig0018513:55241-55260 | None:intergenic | 15.0% |
!! | ATAAAAAATGAAGTAAGAAA+TGG | + | tig0018513:55436-55455 | None:intergenic | 15.0% |
!! | TTACAATTAGATTGAAATTA+CGG | - | tig0018513:57050-57069 | Msa1367370:intron | 15.0% |
!! | ATTCATATAAAAAGGATAAA+TGG | + | tig0018513:57157-57176 | None:intergenic | 15.0% |
!! | CAACTAAAGTATATATTAAA+AGG | + | tig0018513:57266-57285 | None:intergenic | 15.0% |
!! | GTATTCTATTCTATTCTATT+AGG | + | tig0018513:53190-53209 | None:intergenic | 20.0% |
!! | TGAAATTGTACGAAAAAAAA+AGG | + | tig0018513:54538-54557 | None:intergenic | 20.0% |
!! | AATGGATGGAAAAATATAAA+AGG | + | tig0018513:54655-54674 | None:intergenic | 20.0% |
!! | GATATAAATTTACAAAGTTG+GGG | + | tig0018513:55240-55259 | None:intergenic | 20.0% |
!! | GTGATATAAATTTACAAAGT+TGG | + | tig0018513:55242-55261 | None:intergenic | 20.0% |
!!! | TAGCATTTGCTTTTTTAATA+TGG | - | tig0018513:56402-56421 | Msa1367370:intron | 20.0% |
!!! | CTTTTTTAATATGGTGATAT+TGG | - | tig0018513:56411-56430 | Msa1367370:intron | 20.0% |
!! | CTCATTTCATTCATATAAAA+AGG | + | tig0018513:57165-57184 | None:intergenic | 20.0% |
!! | CAATAAAAGGTAAAATAGAA+GGG | + | tig0018513:57205-57224 | None:intergenic | 20.0% |
!!! | CTTCTATTTTACCTTTTATT+GGG | - | tig0018513:57204-57223 | Msa1367370:intron | 20.0% |
!!! | CGAAAGCATTATGTTAATTA+TGG | + | tig0018513:53349-53368 | None:intergenic | 25.0% |
!! | CTCAACATCATTTCAAATTT+TGG | - | tig0018513:53684-53703 | Msa1367370:CDS | 25.0% |
! | TGAGAATCTTAATTATGATC+AGG | - | tig0018513:54497-54516 | Msa1367370:CDS | 25.0% |
!! | AATGGATTTGTACTTAACTT+TGG | - | tig0018513:54585-54604 | Msa1367370:CDS | 25.0% |
! | AGAAAATTCTTAACAATGTC+TGG | + | tig0018513:54780-54799 | None:intergenic | 25.0% |
!!! | TTGAGTTTTGATTTTTACAC+AGG | + | tig0018513:55277-55296 | None:intergenic | 25.0% |
!! | ATTGTTATTCTCATTCACTT+TGG | + | tig0018513:55331-55350 | None:intergenic | 25.0% |
! | AACAATGCTTGAATTTCAAT+TGG | + | tig0018513:55493-55512 | None:intergenic | 25.0% |
! | ATGAAATCAAAAATCCAATC+TGG | + | tig0018513:55733-55752 | None:intergenic | 25.0% |
!!! | AACTCCATCTAGTATTTTTT+GGG | + | tig0018513:55990-56009 | None:intergenic | 25.0% |
!!! | TAACTCCATCTAGTATTTTT+TGG | + | tig0018513:55991-56010 | None:intergenic | 25.0% |
! | AAACTCTATCATTTCAAACT+AGG | - | tig0018513:56276-56295 | Msa1367370:exon | 25.0% |
!! | TAATATGGTGATATTGGTTA+TGG | - | tig0018513:56417-56436 | Msa1367370:intron | 25.0% |
!!! | TTTGACTTGCAATGATAAAA+AGG | - | tig0018513:56771-56790 | Msa1367370:intron | 25.0% |
! | CATATAAAAAGGATAAATGG+AGG | + | tig0018513:57154-57173 | None:intergenic | 25.0% |
! | CCAATAAAAGGTAAAATAGA+AGG | + | tig0018513:57206-57225 | None:intergenic | 25.0% |
!! | CCTTCTATTTTACCTTTTAT+TGG | - | tig0018513:57203-57222 | Msa1367370:intron | 25.0% |
! | TCATATCAAATCCCAATAAA+AGG | + | tig0018513:57218-57237 | None:intergenic | 25.0% |
! | TAATTCTAGGGATCTTGAAT+TGG | - | tig0018513:53593-53612 | Msa1367370:three_prime_UTR | 30.0% |
! | TCGTGTTCTTAATCATTTTG+TGG | - | tig0018513:53632-53651 | Msa1367370:CDS | 30.0% |
AATTAGTTGTGTATCCTAGA+AGG | - | tig0018513:53959-53978 | Msa1367370:intron | 30.0% | |
ATTAGTTGTGTATCCTAGAA+GGG | - | tig0018513:53960-53979 | Msa1367370:intron | 30.0% | |
! | CTAAAGTATTAGATAAGCCA+AGG | - | tig0018513:54187-54206 | Msa1367370:intron | 30.0% |
TCAATGAGTGAACTATCAAT+AGG | - | tig0018513:54249-54268 | Msa1367370:intron | 30.0% | |
CAAGTATAATTCCCCATATT+AGG | + | tig0018513:54696-54715 | None:intergenic | 30.0% | |
AAAGTCTCTAACAAAAACCT+AGG | + | tig0018513:54721-54740 | None:intergenic | 30.0% | |
CATGGGAAAAAAAGATTGAT+AGG | - | tig0018513:54823-54842 | Msa1367370:CDS | 30.0% | |
AAAGATTGATAGGTTTCATC+TGG | - | tig0018513:54833-54852 | Msa1367370:CDS | 30.0% | |
!!! | TTTTAAGGTATTCCATGATC+CGG | - | tig0018513:54878-54897 | Msa1367370:CDS | 30.0% |
TTTATTCATAATCTACTGCC+TGG | - | tig0018513:55170-55189 | Msa1367370:intron | 30.0% | |
!! | ATCATCAATGCTTATTTTCC+AGG | + | tig0018513:55191-55210 | None:intergenic | 30.0% |
!! | GGAAAATAAGCATTGATGAT+AGG | - | tig0018513:55191-55210 | Msa1367370:intron | 30.0% |
ATTCTAGATATGCTACTACT+AGG | - | tig0018513:55362-55381 | Msa1367370:CDS | 30.0% | |
AAATGGATAGATTAACGACT+AGG | + | tig0018513:55419-55438 | None:intergenic | 30.0% | |
! | TTATGATTTCAGGGTGTTTA+TGG | - | tig0018513:55463-55482 | Msa1367370:CDS | 30.0% |
! | AATTCAAGCATTGTTCTTCA+TGG | - | tig0018513:55498-55517 | Msa1367370:CDS | 30.0% |
AATCCAATCTGGTAAAGAAT+CGG | + | tig0018513:55722-55741 | None:intergenic | 30.0% | |
AAATTGCTATGCAATTACCA+AGG | + | tig0018513:55822-55841 | None:intergenic | 30.0% | |
TTATGGATCTCATAGAATCA+CGG | - | tig0018513:55878-55897 | Msa1367370:CDS | 30.0% | |
TCATCATTAAACAAATGCAG+TGG | - | tig0018513:56118-56137 | Msa1367370:CDS | 30.0% | |
! | TATGTTATGGTTTTTGTCTG+CGG | - | tig0018513:56450-56469 | Msa1367370:intron | 30.0% |
GCTATAATACCTAAATGTGA+AGG | + | tig0018513:56664-56683 | None:intergenic | 30.0% | |
ATTGCAAGTCAAAATTGATG+AGG | + | tig0018513:56764-56783 | None:intergenic | 30.0% | |
TGAAACAGAATGATTCATGA+CGG | + | tig0018513:56841-56860 | None:intergenic | 30.0% | |
!! | GAAAAGTTGTTTTATGCACA+AGG | - | tig0018513:56950-56969 | Msa1367370:intron | 30.0% |
! | TAGATTGTGTTTTCTTGAAC+TGG | - | tig0018513:57085-57104 | Msa1367370:intron | 30.0% |
TAAAAGGTAAAATAGAAGGG+TGG | + | tig0018513:57202-57221 | None:intergenic | 30.0% | |
!!! | TCACTAGCATCTATTTTTTC+TGG | - | tig0018513:57239-57258 | Msa1367370:five_prime_UTR | 30.0% |
AATCACAATCACAATTCACG+AGG | - | tig0018513:53069-53088 | Msa1367370:three_prime_UTR | 35.0% | |
TATGAATATGAACGTCGTGA+TGG | + | tig0018513:53243-53262 | None:intergenic | 35.0% | |
! | TCTCTCATGCTTTCTTGTTT+CGG | - | tig0018513:53296-53315 | Msa1367370:three_prime_UTR | 35.0% |
! | CATTGACGTAACGTATTTTG+AGG | - | tig0018513:53420-53439 | Msa1367370:three_prime_UTR | 35.0% |
AGGAAAGAAAAAGATGTGCA+TGG | + | tig0018513:53448-53467 | None:intergenic | 35.0% | |
ATACAAAGTCTCACTAAACC+AGG | - | tig0018513:53756-53775 | Msa1367370:CDS | 35.0% | |
AATTAACCACTTCATTGCCA+TGG | - | tig0018513:53779-53798 | Msa1367370:CDS | 35.0% | |
GATAAGCTCAAATAAGTCCA+TGG | + | tig0018513:53799-53818 | None:intergenic | 35.0% | |
ATTACCAATATGACCCTTCT+AGG | + | tig0018513:53976-53995 | None:intergenic | 35.0% | |
TTGTGATGAGACCAATCTAT+TGG | + | tig0018513:54099-54118 | None:intergenic | 35.0% | |
!! | ATAGATTGGTCTCATCACAA+TGG | - | tig0018513:54099-54118 | Msa1367370:intron | 35.0% |
ATTAAGACCAGATTTGTGCA+CGG | + | tig0018513:54352-54371 | None:intergenic | 35.0% | |
ATTCTCATCAGAATTGTCCA+AGG | + | tig0018513:54484-54503 | None:intergenic | 35.0% | |
!! | TAACTTTGGAGTCCCTAATA+TGG | - | tig0018513:54599-54618 | Msa1367370:CDS | 35.0% |
CATAGGAAACTCAAAATGGA+TGG | + | tig0018513:54669-54688 | None:intergenic | 35.0% | |
!!! | CATCCATTTTGAGTTTCCTA+TGG | - | tig0018513:54667-54686 | Msa1367370:CDS | 35.0% |
TGGAATACCTTAAAACTAGC+AGG | + | tig0018513:54873-54892 | None:intergenic | 35.0% | |
!! | GAAACCTTGATAGCAGATTT+TGG | - | tig0018513:54912-54931 | Msa1367370:intron | 35.0% |
TTCACCAAAATCTGCTATCA+AGG | + | tig0018513:54919-54938 | None:intergenic | 35.0% | |
!! | GATTTTGGTGAAAGTGCAAT+AGG | - | tig0018513:54927-54946 | Msa1367370:intron | 35.0% |
! | CAACTTTACTATGTGCTGAT+GGG | - | tig0018513:55108-55127 | Msa1367370:intron | 35.0% |
CTGTATGATTGATCGTAGAA+TGG | - | tig0018513:55133-55152 | Msa1367370:intron | 35.0% | |
GCTTCTCATATGATAGCTTA+AGG | + | tig0018513:55605-55624 | None:intergenic | 35.0% | |
!! | ATCATATGAGAAGCCACTTT+TGG | - | tig0018513:55611-55630 | Msa1367370:CDS | 35.0% |
ATCCAATCTGGTAAAGAATC+GGG | + | tig0018513:55721-55740 | None:intergenic | 35.0% | |
! | TTTGATTTCATGCCTCATCA+TGG | - | tig0018513:55742-55761 | Msa1367370:intron | 35.0% |
!! | ATCATGGCGGATACTTTATT+GGG | - | tig0018513:55758-55777 | Msa1367370:intron | 35.0% |
ATAATTGCAACTGACTGTTC+AGG | + | tig0018513:55862-55881 | None:intergenic | 35.0% | |
TGAACAGTCAGTTGCAATTA+TGG | - | tig0018513:55861-55880 | Msa1367370:CDS | 35.0% | |
! | CCTCCATTCATGATTTTCAA+GGG | + | tig0018513:55950-55969 | None:intergenic | 35.0% |
! | TCCTCCATTCATGATTTTCA+AGG | + | tig0018513:55951-55970 | None:intergenic | 35.0% |
GTGACCCAAAAAATACTAGA+TGG | - | tig0018513:55983-56002 | Msa1367370:CDS | 35.0% | |
TTGTTCTGCGAAATTCAGAA+TGG | + | tig0018513:56051-56070 | None:intergenic | 35.0% | |
AACAAATGCAGTGGAAACAT+AGG | - | tig0018513:56127-56146 | Msa1367370:CDS | 35.0% | |
! | TATGGTGATATTGGTTATGG+TGG | - | tig0018513:56420-56439 | Msa1367370:intron | 35.0% |
TGGTGGTTACAGTTATGTTA+TGG | - | tig0018513:56437-56456 | Msa1367370:intron | 35.0% | |
TGTGTTCCGTCATAATATTC+CGG | + | tig0018513:56556-56575 | None:intergenic | 35.0% | |
! | GAATATTATGACGGAACACA+TGG | - | tig0018513:56556-56575 | Msa1367370:intron | 35.0% |
! | CTTGATGATCCTTCACATTT+AGG | - | tig0018513:56652-56671 | Msa1367370:intron | 35.0% |
TGCTCAAGAGATCAAATTCA+TGG | - | tig0018513:56716-56735 | Msa1367370:intron | 35.0% | |
GAAGTAAGAAATGTAGTGAG+TGG | - | tig0018513:56796-56815 | Msa1367370:intron | 35.0% | |
!! | TCCATACTTTTCTTGCTGTG+AGG | - | tig0018513:53132-53151 | Msa1367370:three_prime_UTR | 40.0% |
ACCTCACAGCAAGAAAAGTA+TGG | + | tig0018513:53136-53155 | None:intergenic | 40.0% | |
ATCTGGGAAGCAGCAATTAA+AGG | + | tig0018513:53468-53487 | None:intergenic | 40.0% | |
TGAAGCACATACGTACATAC+AGG | + | tig0018513:53660-53679 | None:intergenic | 40.0% | |
GCAATGAAGTGGTTAATTCC+TGG | + | tig0018513:53777-53796 | None:intergenic | 40.0% | |
ATAAGTCCATGGCAATGAAG+TGG | + | tig0018513:53788-53807 | None:intergenic | 40.0% | |
GTATCCTAGAAGGGTCATAT+TGG | - | tig0018513:53969-53988 | Msa1367370:intron | 40.0% | |
CTTTAAATAACCCTGTCTGC+AGG | - | tig0018513:54012-54031 | Msa1367370:intron | 40.0% | |
TGCAAGTGCTAAGATATTGC+TGG | - | tig0018513:54052-54071 | Msa1367370:intron | 40.0% | |
ATGAGACCAATCTATTGGAG+GGG | + | tig0018513:54094-54113 | None:intergenic | 40.0% | |
GATGAGACCAATCTATTGGA+GGG | + | tig0018513:54095-54114 | None:intergenic | 40.0% | |
TGATGAGACCAATCTATTGG+AGG | + | tig0018513:54096-54115 | None:intergenic | 40.0% | |
TGGTCTCATCACAATGGTAA+TGG | - | tig0018513:54105-54124 | Msa1367370:intron | 40.0% | |
ATGTAGTGTCGCAGAATTTG+AGG | - | tig0018513:54152-54171 | Msa1367370:intron | 40.0% | |
CTCTCAATGTTCAAAGTCCT+TGG | + | tig0018513:54207-54226 | None:intergenic | 40.0% | |
! | AGGGAAGTTGTCAAGTTTTG+AGG | + | tig0018513:54295-54314 | None:intergenic | 40.0% |
CATGATCAAGATGTTCTCCA+AGG | + | tig0018513:54320-54339 | None:intergenic | 40.0% | |
TTAAGACCAGATTTGTGCAC+GGG | + | tig0018513:54351-54370 | None:intergenic | 40.0% | |
TACTCCAAGATCACTGCTAT+TGG | - | tig0018513:54371-54390 | Msa1367370:CDS | 40.0% | |
! | ATTCAATTTTGCCCGAAGCT+TGG | - | tig0018513:54400-54419 | Msa1367370:CDS | 40.0% |
! | TTCAATTTTGCCCGAAGCTT+GGG | - | tig0018513:54401-54420 | Msa1367370:CDS | 40.0% |
TTCACCACGAAAATGTACCA+AGG | + | tig0018513:54442-54461 | None:intergenic | 40.0% | |
GCATGACAAGGTCCATATTA+GGG | + | tig0018513:54614-54633 | None:intergenic | 40.0% | |
AGCATGACAAGGTCCATATT+AGG | + | tig0018513:54615-54634 | None:intergenic | 40.0% | |
TAATATGGACCTTGTCATGC+TGG | - | tig0018513:54614-54633 | Msa1367370:CDS | 40.0% | |
CCTCCATAGGAAACTCAAAA+TGG | + | tig0018513:54673-54692 | None:intergenic | 40.0% | |
!!! | CCATTTTGAGTTTCCTATGG+AGG | - | tig0018513:54670-54689 | Msa1367370:CDS | 40.0% |
TTTCCTATGGAGGCCTAATA+TGG | - | tig0018513:54680-54699 | Msa1367370:CDS | 40.0% | |
TTCCTATGGAGGCCTAATAT+GGG | - | tig0018513:54681-54700 | Msa1367370:CDS | 40.0% | |
! | ATCAAAAAAGCCAGAGCACT+TGG | + | tig0018513:54747-54766 | None:intergenic | 40.0% |
!!! | CTCTGGCTTTTTTGATGCAT+GGG | - | tig0018513:54751-54770 | Msa1367370:CDS | 40.0% |
!!! | TCTGGCTTTTTTGATGCATG+GGG | - | tig0018513:54752-54771 | Msa1367370:CDS | 40.0% |
AGACTCTTCGTCTTCAATCA+TGG | - | tig0018513:54805-54824 | Msa1367370:CDS | 40.0% | |
GACTCTTCGTCTTCAATCAT+GGG | - | tig0018513:54806-54825 | Msa1367370:CDS | 40.0% | |
ATAGGTTTCATCTGGCAGAA+GGG | - | tig0018513:54841-54860 | Msa1367370:CDS | 40.0% | |
AATCTGCTATCAAGGTTTCG+CGG | + | tig0018513:54911-54930 | None:intergenic | 40.0% | |
!!! | CTCCTGTTGATTCTGGATTT+TGG | - | tig0018513:54958-54977 | Msa1367370:intron | 40.0% |
CACCAAAATCCAGAATCAAC+AGG | + | tig0018513:54963-54982 | None:intergenic | 40.0% | |
!!! | CTGTTGATTCTGGATTTTGG+TGG | - | tig0018513:54961-54980 | Msa1367370:intron | 40.0% |
CGTGCATACACAAAATCTAC+AGG | - | tig0018513:54996-55015 | Msa1367370:intron | 40.0% | |
TCTGAGTTTATGCTTGTCAG+AGG | - | tig0018513:55070-55089 | Msa1367370:intron | 40.0% | |
CTGAGTTTATGCTTGTCAGA+GGG | - | tig0018513:55071-55090 | Msa1367370:intron | 40.0% | |
TGAGTTTATGCTTGTCAGAG+GGG | - | tig0018513:55072-55091 | Msa1367370:intron | 40.0% | |
CCATCAGCACATAGTAAAGT+TGG | + | tig0018513:55110-55129 | None:intergenic | 40.0% | |
CCAACTTTACTATGTGCTGA+TGG | - | tig0018513:55107-55126 | Msa1367370:intron | 40.0% | |
! | ATCTGGCTTAAGCAATAGCA+TGG | + | tig0018513:55536-55555 | None:intergenic | 40.0% |
TGCTGAAGGGAAAGAGTTTA+TGG | - | tig0018513:55555-55574 | Msa1367370:CDS | 40.0% | |
!!! | TATGAGAAGCCACTTTTGGT+TGG | - | tig0018513:55615-55634 | Msa1367370:CDS | 40.0% |
GCTTCAAATCCAACCAAAAG+TGG | + | tig0018513:55627-55646 | None:intergenic | 40.0% | |
TTCCCGATTCTTTACCAGAT+TGG | - | tig0018513:55716-55735 | Msa1367370:intron | 40.0% | |
! | ATAAAGTATCCGCCATGATG+AGG | + | tig0018513:55757-55776 | None:intergenic | 40.0% |
!! | CATCATGGCGGATACTTTAT+TGG | - | tig0018513:55757-55776 | Msa1367370:intron | 40.0% |
CTTTATTGGGAATGTGAGTC+CGG | - | tig0018513:55771-55790 | Msa1367370:intron | 40.0% | |
AATTACCAAGGCAAAACCAG+CGG | + | tig0018513:55810-55829 | None:intergenic | 40.0% | |
! | CATAGCAATTTTGTCCTGCT+TGG | - | tig0018513:55831-55850 | Msa1367370:intron | 40.0% |
TCACGGTGGGAAGAATTAAT+TGG | - | tig0018513:55895-55914 | Msa1367370:CDS | 40.0% | |
CACGGTGGGAAGAATTAATT+GGG | - | tig0018513:55896-55915 | Msa1367370:CDS | 40.0% | |
ACGGTGGGAAGAATTAATTG+GGG | - | tig0018513:55897-55916 | Msa1367370:CDS | 40.0% | |
GCTGGATAACAAACTTTGAC+AGG | + | tig0018513:55928-55947 | None:intergenic | 40.0% | |
!! | CATTCATGATTTTCAAGGGC+TGG | + | tig0018513:55946-55965 | None:intergenic | 40.0% |
CAGCCCTTGAAAATCATGAA+TGG | - | tig0018513:55944-55963 | Msa1367370:CDS | 40.0% | |
CCCTTGAAAATCATGAATGG+AGG | - | tig0018513:55947-55966 | Msa1367370:CDS | 40.0% | |
CATGAATGGAGGATCATAAC+AGG | - | tig0018513:55958-55977 | Msa1367370:CDS | 40.0% | |
ACTAGATGGAGTTACCACAA+TGG | - | tig0018513:55997-56016 | Msa1367370:CDS | 40.0% | |
CTAGATGGAGTTACCACAAT+GGG | - | tig0018513:55998-56017 | Msa1367370:CDS | 40.0% | |
TAGATGGAGTTACCACAATG+GGG | - | tig0018513:55999-56018 | Msa1367370:CDS | 40.0% | |
!! | AATGGTAGCATAAGAGTACC+TGG | + | tig0018513:56033-56052 | None:intergenic | 40.0% |
! | TGTGTGTGTACGACTTTTGA+GGG | - | tig0018513:56080-56099 | Msa1367370:CDS | 40.0% |
TATTAGCCAGTCTCCAAACA+AGG | - | tig0018513:56312-56331 | Msa1367370:five_prime_UTR | 40.0% | |
ATTAGCCAGTCTCCAAACAA+GGG | - | tig0018513:56313-56332 | Msa1367370:five_prime_UTR | 40.0% | |
!! | AAGGGCACGTTTTGCAATTT+GGG | + | tig0018513:56497-56516 | None:intergenic | 40.0% |
! | CCAGTTGTCTTTTAGCAATC+TGG | + | tig0018513:56533-56552 | None:intergenic | 40.0% |
CCAGATTGCTAAAAGACAAC+TGG | - | tig0018513:56530-56549 | Msa1367370:intron | 40.0% | |
ATTGCTAAAAGACAACTGGC+CGG | - | tig0018513:56534-56553 | Msa1367370:intron | 40.0% | |
AACTGGCCGGAATATTATGA+CGG | - | tig0018513:56547-56566 | Msa1367370:intron | 40.0% | |
GAACACATGGTCGATACATT+GGG | - | tig0018513:56569-56588 | Msa1367370:intron | 40.0% | |
CAAATAACCAGCAATAGACC+AGG | + | tig0018513:56617-56636 | None:intergenic | 40.0% | |
! | CTGGTCTATTGCTGGTTATT+TGG | - | tig0018513:56615-56634 | Msa1367370:intron | 40.0% |
! | GTCTATTGCTGGTTATTTGG+TGG | - | tig0018513:56618-56637 | Msa1367370:intron | 40.0% |
GAATTTGATCTCTTGAGCAC+AGG | + | tig0018513:56715-56734 | None:intergenic | 40.0% | |
ATACGCAAACACTAGACATG+TGG | + | tig0018513:56866-56885 | None:intergenic | 40.0% | |
ACTTATGAGCATTCCACTGA+AGG | + | tig0018513:56890-56909 | None:intergenic | 40.0% | |
! | CTGTGTTCTGTAGAGTTTTC+AGG | - | tig0018513:56917-56936 | Msa1367370:intron | 40.0% |
!! | AGAGTTTTCAGGATCGTCAA+TGG | - | tig0018513:56928-56947 | Msa1367370:intron | 40.0% |
TATGCACAAGGTGAAACCAA+TGG | - | tig0018513:56962-56981 | Msa1367370:intron | 40.0% | |
GAAACCAATGGTTCGTTATC+AGG | - | tig0018513:56974-56993 | Msa1367370:intron | 40.0% | |
! | TGTTCCTGATAACGAACCAT+TGG | + | tig0018513:56981-57000 | None:intergenic | 40.0% |
TAGCTTCACATTTCGTGATG+TGG | + | tig0018513:57116-57135 | None:intergenic | 40.0% | |
TCCTCAAAATCCTGCAGACA+GGG | + | tig0018513:54025-54044 | None:intergenic | 45.0% | |
AGGCTTATCTCCACGTCTAT+TGG | - | tig0018513:54269-54288 | Msa1367370:intron | 45.0% | |
!!! | AGTTTTGAGGCCAATAGACG+TGG | + | tig0018513:54282-54301 | None:intergenic | 45.0% |
AGATTTGTGCACGGGAGAAA+AGG | + | tig0018513:54343-54362 | None:intergenic | 45.0% | |
! | TTTTCTCCCGTGCACAAATC+TGG | - | tig0018513:54342-54361 | Msa1367370:CDS | 45.0% |
GAGTCCAATAGCAGTGATCT+TGG | + | tig0018513:54378-54397 | None:intergenic | 45.0% | |
! | CGTTCCTTGGTACATTTTCG+TGG | - | tig0018513:54435-54454 | Msa1367370:CDS | 45.0% |
! | CATTTTCGTGGTGAACCAGT+TGG | - | tig0018513:54447-54466 | Msa1367370:CDS | 45.0% |
AAGGCAGCAATTGTTCCAAC+TGG | + | tig0018513:54465-54484 | None:intergenic | 45.0% | |
AGTTGGAACAATTGCTGCCT+TGG | - | tig0018513:54464-54483 | Msa1367370:CDS | 45.0% | |
TCCTATGGAGGCCTAATATG+GGG | - | tig0018513:54682-54701 | Msa1367370:CDS | 45.0% | |
GGGGAATTATACTTGTGCCT+AGG | - | tig0018513:54701-54720 | Msa1367370:CDS | 45.0% | |
AGACTTTGTTCCAAGTGCTC+TGG | - | tig0018513:54734-54753 | Msa1367370:CDS | 45.0% | |
!!! | GCTCTGGCTTTTTTGATGCA+TGG | - | tig0018513:54750-54769 | Msa1367370:CDS | 45.0% |
GATAGGTTTCATCTGGCAGA+AGG | - | tig0018513:54840-54859 | Msa1367370:CDS | 45.0% | |
TAGGTTTCATCTGGCAGAAG+GGG | - | tig0018513:54842-54861 | Msa1367370:CDS | 45.0% | |
!!! | GGTGATGCCTGCTAGTTTTA+AGG | - | tig0018513:54863-54882 | Msa1367370:CDS | 45.0% |
! | TTGGTGAAAGTGCAATAGGC+AGG | - | tig0018513:54931-54950 | Msa1367370:intron | 45.0% |
! | TGGTGAAAGTGCAATAGGCA+GGG | - | tig0018513:54932-54951 | Msa1367370:intron | 45.0% |
TGACCAGCCTGAATGTCAAA+AGG | - | tig0018513:55034-55053 | Msa1367370:intron | 45.0% | |
GACCAGCCTGAATGTCAAAA+GGG | - | tig0018513:55035-55054 | Msa1367370:intron | 45.0% | |
! | TACCCTTTTGACATTCAGGC+TGG | + | tig0018513:55040-55059 | None:intergenic | 45.0% |
! | CGCATACCCTTTTGACATTC+AGG | + | tig0018513:55044-55063 | None:intergenic | 45.0% |
TTGCTTAAGCCAGATGCTGA+AGG | - | tig0018513:55541-55560 | Msa1367370:CDS | 45.0% | |
TGCTTAAGCCAGATGCTGAA+GGG | - | tig0018513:55542-55561 | Msa1367370:CDS | 45.0% | |
AACTCTTTCCCTTCAGCATC+TGG | + | tig0018513:55553-55572 | None:intergenic | 45.0% | |
GATTTCATGCCTCATCATGG+CGG | - | tig0018513:55745-55764 | Msa1367370:intron | 45.0% | |
TGGATCTCATAGAATCACGG+TGG | - | tig0018513:55881-55900 | Msa1367370:CDS | 45.0% | |
GGATCTCATAGAATCACGGT+GGG | - | tig0018513:55882-55901 | Msa1367370:CDS | 45.0% | |
AGATGGAGTTACCACAATGG+GGG | - | tig0018513:56000-56019 | Msa1367370:CDS | 45.0% | |
! | GTGTGTGTGTACGACTTTTG+AGG | - | tig0018513:56079-56098 | Msa1367370:CDS | 45.0% |
GACTAAATCACGATGACACG+TGG | + | tig0018513:56256-56275 | None:intergenic | 45.0% | |
GCATTAGCATAGCCCTTGTT+TGG | + | tig0018513:56328-56347 | None:intergenic | 45.0% | |
! | GTTATGGTTTTTGTCTGCGG+CGG | - | tig0018513:56453-56472 | Msa1367370:intron | 45.0% |
! | AGGGCACGTTTTGCAATTTG+GGG | + | tig0018513:56496-56515 | None:intergenic | 45.0% |
!! | GAAGGGCACGTTTTGCAATT+TGG | + | tig0018513:56498-56517 | None:intergenic | 45.0% |
TCTGGCCTCAGCAATTTGAA+GGG | + | tig0018513:56515-56534 | None:intergenic | 45.0% | |
ATCTGGCCTCAGCAATTTGA+AGG | + | tig0018513:56516-56535 | None:intergenic | 45.0% | |
GGAACACATGGTCGATACAT+TGG | - | tig0018513:56568-56587 | Msa1367370:intron | 45.0% | |
AACCAGCAATAGACCAGGTT+TGG | + | tig0018513:56612-56631 | None:intergenic | 45.0% | |
! | TTGCTGGTTATTTGGTGGCT+AGG | - | tig0018513:56623-56642 | Msa1367370:intron | 45.0% |
TGAAGAAGACCGACAGCTAA+AGG | - | tig0018513:56687-56706 | Msa1367370:intron | 45.0% | |
GTAGTGAGTGGAAGAATGTG+TGG | - | tig0018513:56808-56827 | Msa1367370:intron | 45.0% | |
GTGTTTGCGTATTCCTTCAG+TGG | - | tig0018513:56874-56893 | Msa1367370:intron | 45.0% | |
! | CGTCGTGATGGAAATGCGAA+GGG | + | tig0018513:53231-53250 | None:intergenic | 50.0% |
! | ACGTCGTGATGGAAATGCGA+AGG | + | tig0018513:53232-53251 | None:intergenic | 50.0% |
! | ACCCTGTCTGCAGGATTTTG+AGG | - | tig0018513:54021-54040 | Msa1367370:intron | 50.0% |
GTCCTCAAAATCCTGCAGAC+AGG | + | tig0018513:54026-54045 | None:intergenic | 50.0% | |
CCAATCTATTGGAGGGGTAG+AGG | + | tig0018513:54088-54107 | None:intergenic | 50.0% | |
CCTCTACCCCTCCAATAGAT+TGG | - | tig0018513:54085-54104 | Msa1367370:intron | 50.0% | |
CAAGATGTTCTCCAAGGCGA+GGG | + | tig0018513:54314-54333 | None:intergenic | 50.0% | |
TCAAGATGTTCTCCAAGGCG+AGG | + | tig0018513:54315-54334 | None:intergenic | 50.0% | |
ACCTTGTCATGCTGGATCAG+TGG | - | tig0018513:54622-54641 | Msa1367370:CDS | 50.0% | |
ACCACTGATCCAGCATGACA+AGG | + | tig0018513:54626-54645 | None:intergenic | 50.0% | |
TCCCCATATTAGGCCTCCAT+AGG | + | tig0018513:54686-54705 | None:intergenic | 50.0% | |
AAGGTTTCGCGGTTTCTGAC+CGG | + | tig0018513:54900-54919 | None:intergenic | 50.0% | |
!! | AGGGTTGCTCCTGTTGATTC+TGG | - | tig0018513:54951-54970 | Msa1367370:intron | 50.0% |
!! | TGCTACTACTAGGCACTGAC+AGG | - | tig0018513:55372-55391 | Msa1367370:CDS | 50.0% |
!! | GCTACTACTAGGCACTGACA+GGG | - | tig0018513:55373-55392 | Msa1367370:CDS | 50.0% |
!! | CTACTACTAGGCACTGACAG+GGG | - | tig0018513:55374-55393 | Msa1367370:CDS | 50.0% |
!!! | GATTTCCGCTGGTTTTGCCT+TGG | - | tig0018513:55802-55821 | Msa1367370:intron | 50.0% |
GTTACCACAATGGGGGATCT+TGG | - | tig0018513:56007-56026 | Msa1367370:CDS | 50.0% | |
! | CATAGCCCTTGTTTGGAGAC+TGG | + | tig0018513:56321-56340 | None:intergenic | 50.0% |
ACGTGCCCTTCAAATTGCTG+AGG | - | tig0018513:56507-56526 | Msa1367370:intron | 50.0% | |
TGGTCGATACATTGGGAAGC+AGG | - | tig0018513:56576-56595 | Msa1367370:intron | 50.0% | |
AGGCTCGAAAATGCCAAACC+TGG | - | tig0018513:56596-56615 | Msa1367370:intron | 50.0% | |
TGCCAAACCTGGTCTATTGC+TGG | - | tig0018513:56607-56626 | Msa1367370:intron | 50.0% | |
GCACAGGATCCTTTAGCTGT+CGG | + | tig0018513:56699-56718 | None:intergenic | 50.0% | |
CAGGAACAGCTTGCAGTTCT+TGG | - | tig0018513:56993-57012 | Msa1367370:intron | 50.0% | |
GAACAGCTTGCAGTTCTTGG+TGG | - | tig0018513:56996-57015 | Msa1367370:intron | 50.0% | |
CTTGACAACTTCCCTCGCCT+TGG | - | tig0018513:54300-54319 | Msa1367370:intron | 55.0% | |
CTGAGAGCTTCCCAAGCTTC+GGG | + | tig0018513:54414-54433 | None:intergenic | 55.0% | |
CCTGAGAGCTTCCCAAGCTT+CGG | + | tig0018513:54415-54434 | None:intergenic | 55.0% | |
TTGGGAATGTGAGTCCGGCT+AGG | - | tig0018513:55776-55795 | Msa1367370:intron | 55.0% | |
GAATGTGAGTCCGGCTAGGA+TGG | - | tig0018513:55780-55799 | Msa1367370:intron | 55.0% | |
CAGCGGAAATCCATCCTAGC+CGG | + | tig0018513:55793-55812 | None:intergenic | 55.0% | |
CTGTTCAGGAGTTGCCAAGC+AGG | + | tig0018513:55848-55867 | None:intergenic | 55.0% | |
! | GCTTGCAGTTCTTGGTGGAC+TGG | - | tig0018513:57001-57020 | Msa1367370:intron | 55.0% |
CCGAAGCTTGGGAAGCTCTC+AGG | - | tig0018513:54412-54431 | Msa1367370:CDS | 60.0% | |
GGAAGCTCTCAGGCGTTCCT+TGG | - | tig0018513:54422-54441 | Msa1367370:CDS | 60.0% | |
CGCGGTTTCTGACCGGATCA+TGG | + | tig0018513:54893-54912 | None:intergenic | 60.0% | |
! | CGGCTAGGATGGATTTCCGC+TGG | - | tig0018513:55791-55810 | Msa1367370:intron | 60.0% |
CTGGCCAAGATCCCCCATTG+TGG | + | tig0018513:56014-56033 | None:intergenic | 60.0% | |
CACAATGGGGGATCTTGGCC+AGG | - | tig0018513:56012-56031 | Msa1367370:CDS | 60.0% | |
TCTGCGGCGGCTATCAAGAC+TGG | - | tig0018513:56466-56485 | Msa1367370:intron | 60.0% | |
CTGCGGCGGCTATCAAGACT+GGG | - | tig0018513:56467-56486 | Msa1367370:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0018513 | gene | 53069 | 57303 | 53069 | ID=Msa1367370;Name=Msa1367370 |
tig0018513 | mRNA | 53069 | 57303 | 53069 | ID=Msa1367370-mRNA-1;Parent=Msa1367370;Name=Msa1367370-mRNA-1;_AED=0.05;_eAED=0.05;_QI=129|1|1|1|0.75|0.6|5|556|576 |
tig0018513 | exon | 53069 | 53923 | 53069 | ID=Msa1367370-mRNA-1:exon:15525;Parent=Msa1367370-mRNA-1 |
tig0018513 | exon | 54339 | 54897 | 54339 | ID=Msa1367370-mRNA-1:exon:15524;Parent=Msa1367370-mRNA-1 |
tig0018513 | exon | 55218 | 55649 | 55218 | ID=Msa1367370-mRNA-1:exon:15523;Parent=Msa1367370-mRNA-1 |
tig0018513 | exon | 55854 | 56338 | 55854 | ID=Msa1367370-mRNA-1:exon:15522;Parent=Msa1367370-mRNA-1 |
tig0018513 | exon | 57219 | 57303 | 57219 | ID=Msa1367370-mRNA-1:exon:15521;Parent=Msa1367370-mRNA-1 |
tig0018513 | five_prime_UTR | 57219 | 57303 | 57219 | ID=Msa1367370-mRNA-1:five_prime_utr;Parent=Msa1367370-mRNA-1 |
tig0018513 | five_prime_UTR | 56295 | 56338 | 56295 | ID=Msa1367370-mRNA-1:five_prime_utr;Parent=Msa1367370-mRNA-1 |
tig0018513 | CDS | 55854 | 56294 | 55854 | ID=Msa1367370-mRNA-1:cds;Parent=Msa1367370-mRNA-1 |
tig0018513 | CDS | 55218 | 55649 | 55218 | ID=Msa1367370-mRNA-1:cds;Parent=Msa1367370-mRNA-1 |
tig0018513 | CDS | 54339 | 54897 | 54339 | ID=Msa1367370-mRNA-1:cds;Parent=Msa1367370-mRNA-1 |
tig0018513 | CDS | 53625 | 53923 | 53625 | ID=Msa1367370-mRNA-1:cds;Parent=Msa1367370-mRNA-1 |
tig0018513 | three_prime_UTR | 53069 | 53624 | 53069 | ID=Msa1367370-mRNA-1:three_prime_utr;Parent=Msa1367370-mRNA-1 |
Gene Sequence |
Protein sequence |