Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0218780 | XP_013464923.1 | 99.099 | 111 | 1 | 0 | 1 | 111 | 1 | 111 | 5.16e-71 | 217 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0218780 | sp|Q9FK81|Y5258_ARATH | 65.657 | 99 | 34 | 0 | 7 | 105 | 6 | 104 | 5.42e-41 | 134 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0218780 | B7FMZ0 | 99.099 | 111 | 1 | 0 | 1 | 111 | 1 | 111 | 2.46e-71 | 217 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002930 | Msa0218780 | 0.800270 | 1.559157e-48 | -8.615850e-47 |
| Msa0017510 | Msa0218780 | 0.846693 | 1.850438e-59 | -8.615850e-47 |
| Msa0032840 | Msa0218780 | -0.817909 | 2.582254e-52 | -8.615850e-47 |
| Msa0034270 | Msa0218780 | 0.802444 | 5.593698e-49 | -8.615850e-47 |
| Msa0040450 | Msa0218780 | 0.807736 | 4.368991e-50 | -8.615850e-47 |
| Msa0044020 | Msa0218780 | 0.804117 | 2.519450e-49 | -8.615850e-47 |
| Msa0046100 | Msa0218780 | 0.860529 | 1.938172e-63 | -8.615850e-47 |
| Msa0046750 | Msa0218780 | 0.806645 | 7.439306e-50 | -8.615850e-47 |
| Msa0053780 | Msa0218780 | 0.811928 | 5.477137e-51 | -8.615850e-47 |
| Msa0068680 | Msa0218780 | 0.802853 | 4.606833e-49 | -8.615850e-47 |
| Msa0069330 | Msa0218780 | 0.831259 | 1.847838e-55 | -8.615850e-47 |
| Msa0072370 | Msa0218780 | 0.808037 | 3.770203e-50 | -8.615850e-47 |
| Msa0077600 | Msa0218780 | 0.810867 | 9.308249e-51 | -8.615850e-47 |
| Msa0077680 | Msa0218780 | 0.803658 | 3.137976e-49 | -8.615850e-47 |
| Msa0078650 | Msa0218780 | 0.802943 | 4.412583e-49 | -8.615850e-47 |
| Msa0081360 | Msa0218780 | 0.805343 | 1.397641e-49 | -8.615850e-47 |
| Msa0081480 | Msa0218780 | 0.808434 | 3.103057e-50 | -8.615850e-47 |
| Msa0089380 | Msa0218780 | 0.850926 | 1.238114e-60 | -8.615850e-47 |
| Msa0089630 | Msa0218780 | 0.816515 | 5.315239e-52 | -8.615850e-47 |
| Msa0090590 | Msa0218780 | 0.806242 | 9.045027e-50 | -8.615850e-47 |
| Msa0094850 | Msa0218780 | 0.803175 | 3.950859e-49 | -8.615850e-47 |
| Msa0103000 | Msa0218780 | 0.814653 | 1.380995e-51 | -8.615850e-47 |
| Msa0104550 | Msa0218780 | 0.831890 | 1.291283e-55 | -8.615850e-47 |
| Msa0110970 | Msa0218780 | 0.859004 | 5.580184e-63 | -8.615850e-47 |
| Msa0114540 | Msa0218780 | -0.831592 | 1.529247e-55 | -8.615850e-47 |
| Msa0118400 | Msa0218780 | 0.800985 | 1.114462e-48 | -8.615850e-47 |
| Msa0126370 | Msa0218780 | 0.802755 | 4.827055e-49 | -8.615850e-47 |
| Msa0130570 | Msa0218780 | 0.815419 | 9.335787e-52 | -8.615850e-47 |
| Msa0143430 | Msa0218780 | 0.805870 | 1.083332e-49 | -8.615850e-47 |
| Msa0147560 | Msa0218780 | 0.809550 | 1.790262e-50 | -8.615850e-47 |
| Msa0148100 | Msa0218780 | 0.810147 | 1.332175e-50 | -8.615850e-47 |
| Msa0150570 | Msa0218780 | 0.806350 | 8.586599e-50 | -8.615850e-47 |
| Msa0157290 | Msa0218780 | 0.846809 | 1.719585e-59 | -8.615850e-47 |
| Msa0157300 | Msa0218780 | 0.813156 | 2.951421e-51 | -8.615850e-47 |
| Msa0168500 | Msa0218780 | 0.807112 | 5.927185e-50 | -8.615850e-47 |
| Msa0173990 | Msa0218780 | 0.819083 | 1.399419e-52 | -8.615850e-47 |
| Msa0192510 | Msa0218780 | 0.800248 | 1.575759e-48 | -8.615850e-47 |
| Msa0197660 | Msa0218780 | 0.815870 | 7.406244e-52 | -8.615850e-47 |
| Msa0197930 | Msa0218780 | 0.812475 | 4.160351e-51 | -8.615850e-47 |
| Msa0203030 | Msa0218780 | 0.814728 | 1.329187e-51 | -8.615850e-47 |
| Msa0218780 | Msa0219190 | 0.815522 | 8.856550e-52 | -8.615850e-47 |
| Msa0218780 | Msa0220740 | 0.811062 | 8.446207e-51 | -8.615850e-47 |
| Msa0218780 | Msa0221290 | 0.821882 | 3.188087e-53 | -8.615850e-47 |
| Msa0218780 | Msa0230550 | -0.808196 | 3.487988e-50 | -8.615850e-47 |
| Msa0218780 | Msa0239800 | 0.816980 | 4.179891e-52 | -8.615850e-47 |
| Msa0218780 | Msa0240110 | 0.803057 | 4.179211e-49 | -8.615850e-47 |
| Msa0218780 | Msa0240150 | 0.807322 | 5.348743e-50 | -8.615850e-47 |
| Msa0218780 | Msa0243100 | 0.816989 | 4.159945e-52 | -8.615850e-47 |
| Msa0218780 | Msa0258330 | 0.821422 | 4.072901e-53 | -8.615850e-47 |
| Msa0218780 | Msa0264150 | 0.803554 | 3.298540e-49 | -8.615850e-47 |
| Msa0218780 | Msa0266500 | 0.804391 | 2.209709e-49 | -8.615850e-47 |
| Msa0218780 | Msa0287650 | 0.822611 | 2.159045e-53 | -8.615850e-47 |
| Msa0218780 | Msa0292400 | 0.814222 | 1.719444e-51 | -8.615850e-47 |
| Msa0218780 | Msa0297740 | 0.826318 | 2.896899e-54 | -8.615850e-47 |
| Msa0218780 | Msa0298240 | 0.813639 | 2.312026e-51 | -8.615850e-47 |
| Msa0218780 | Msa0300120 | 0.807855 | 4.122846e-50 | -8.615850e-47 |
| Msa0218780 | Msa0300690 | 0.816018 | 6.865297e-52 | -8.615850e-47 |
| Msa0218780 | Msa0306300 | 0.846774 | 1.758494e-59 | -8.615850e-47 |
| Msa0218780 | Msa0308830 | 0.800973 | 1.120751e-48 | -8.615850e-47 |
| Msa0218780 | Msa0317280 | 0.800093 | 1.694272e-48 | -8.615850e-47 |
| Msa0218780 | Msa0317340 | 0.811642 | 6.321909e-51 | -8.615850e-47 |
| Msa0218780 | Msa0317510 | 0.817375 | 3.407932e-52 | -8.615850e-47 |
| Msa0218780 | Msa0323610 | 0.809761 | 1.612434e-50 | -8.615850e-47 |
| Msa0218780 | Msa0329620 | 0.803927 | 2.759450e-49 | -8.615850e-47 |
| Msa0218780 | Msa0334040 | 0.805506 | 1.292023e-49 | -8.615850e-47 |
| Msa0218780 | Msa0335780 | 0.824162 | 9.373826e-54 | -8.615850e-47 |
| Msa0218780 | Msa0340090 | 0.805020 | 1.633048e-49 | -8.615850e-47 |
| Msa0218780 | Msa0345970 | 0.803029 | 4.236707e-49 | -8.615850e-47 |
| Msa0218780 | Msa0362780 | 0.800710 | 1.268464e-48 | -8.615850e-47 |
| Msa0218780 | Msa0369850 | 0.809745 | 1.625605e-50 | -8.615850e-47 |
| Msa0218780 | Msa0376350 | 0.825356 | 4.902008e-54 | -8.615850e-47 |
| Msa0218780 | Msa0385390 | 0.811255 | 7.671261e-51 | -8.615850e-47 |
| Msa0218780 | Msa0392420 | 0.806088 | 9.745920e-50 | -8.615850e-47 |
| Msa0218780 | Msa0392460 | 0.803114 | 4.068567e-49 | -8.615850e-47 |
| Msa0218780 | Msa0410650 | 0.844802 | 6.034041e-59 | -8.615850e-47 |
| Msa0218780 | Msa0419820 | 0.824060 | 9.901634e-54 | -8.615850e-47 |
| Msa0218780 | Msa0420840 | 0.812457 | 4.199269e-51 | -8.615850e-47 |
| Msa0218780 | Msa0422850 | 0.870979 | 9.684468e-67 | -8.615850e-47 |
| Msa0218780 | Msa0422930 | 0.872173 | 3.896283e-67 | -8.615850e-47 |
| Msa0218780 | Msa0423040 | 0.801717 | 7.892956e-49 | -8.615850e-47 |
| Msa0218780 | Msa0424790 | 0.811158 | 8.053863e-51 | -8.615850e-47 |
| Msa0218780 | Msa0436050 | 0.828420 | 9.078928e-55 | -8.615850e-47 |
| Msa0218780 | Msa0436500 | 0.809211 | 2.116290e-50 | -8.615850e-47 |
| Msa0218780 | Msa0440750 | 0.812392 | 4.339487e-51 | -8.615850e-47 |
| Msa0218780 | Msa0450720 | 0.802121 | 6.518452e-49 | -8.615850e-47 |
| Msa0218780 | Msa0461720 | 0.841785 | 3.849766e-58 | -8.615850e-47 |
| Msa0218780 | Msa0464380 | 0.814831 | 1.260875e-51 | -8.615850e-47 |
| Msa0218780 | Msa0474950 | 0.806906 | 6.552680e-50 | -8.615850e-47 |
| Msa0218780 | Msa0479170 | 0.811049 | 8.501675e-51 | -8.615850e-47 |
| Msa0218780 | Msa0479660 | 0.806679 | 7.317017e-50 | -8.615850e-47 |
| Msa0218780 | Msa0484780 | 0.801352 | 9.377703e-49 | -8.615850e-47 |
| Msa0218780 | Msa0487570 | 0.806842 | 6.757913e-50 | -8.615850e-47 |
| Msa0218780 | Msa0487630 | 0.802683 | 4.994466e-49 | -8.615850e-47 |
| Msa0218780 | Msa0498060 | 0.805263 | 1.452568e-49 | -8.615850e-47 |
| Msa0218780 | Msa0503580 | 0.858231 | 9.491901e-63 | -8.615850e-47 |
| Msa0218780 | Msa0503590 | 0.804337 | 2.267021e-49 | -8.615850e-47 |
| Msa0218780 | Msa0507680 | 0.843027 | 1.802954e-58 | -8.615850e-47 |
| Msa0218780 | Msa0509610 | 0.800519 | 1.387309e-48 | -8.615850e-47 |
| Msa0218780 | Msa0516170 | 0.820878 | 5.434032e-53 | -8.615850e-47 |
| Msa0218780 | Msa0521540 | 0.807393 | 5.168024e-50 | -8.615850e-47 |
| Msa0218780 | Msa0523460 | 0.809387 | 1.940278e-50 | -8.615850e-47 |
| Msa0218780 | Msa0527550 | 0.812160 | 4.875964e-51 | -8.615850e-47 |
| Msa0218780 | Msa0535040 | 0.832628 | 8.481792e-56 | -8.615850e-47 |
| Msa0218780 | Msa0537920 | 0.801593 | 8.367332e-49 | -8.615850e-47 |
| Msa0218780 | Msa0546680 | 0.812755 | 3.614685e-51 | -8.615850e-47 |
| Msa0218780 | Msa0574890 | 0.819648 | 1.040286e-52 | -8.615850e-47 |
| Msa0218780 | Msa0578040 | 0.828918 | 6.882629e-55 | -8.615850e-47 |
| Msa0218780 | Msa0591790 | 0.800728 | 1.257676e-48 | -8.615850e-47 |
| Msa0218780 | Msa0602250 | 0.803714 | 3.056176e-49 | -8.615850e-47 |
| Msa0218780 | Msa0607050 | 0.802295 | 6.004149e-49 | -8.615850e-47 |
| Msa0218780 | Msa0612290 | 0.811258 | 7.658152e-51 | -8.615850e-47 |
| Msa0218780 | Msa0623080 | 0.803186 | 3.930474e-49 | -8.615850e-47 |
| Msa0218780 | Msa0643890 | 0.802954 | 4.389877e-49 | -8.615850e-47 |
| Msa0218780 | Msa0657970 | 0.808238 | 3.415880e-50 | -8.615850e-47 |
| Msa0218780 | Msa0677410 | 0.800532 | 1.379030e-48 | -8.615850e-47 |
| Msa0218780 | Msa0682330 | 0.803415 | 3.524387e-49 | -8.615850e-47 |
| Msa0218780 | Msa0682550 | 0.811143 | 8.114788e-51 | -8.615850e-47 |
| Msa0218780 | Msa0690150 | 0.801816 | 7.533471e-49 | -8.615850e-47 |
| Msa0218780 | Msa0696450 | 0.834401 | 3.062767e-56 | -8.615850e-47 |
| Msa0218780 | Msa0708520 | 0.815825 | 7.579935e-52 | -8.615850e-47 |
| Msa0218780 | Msa0729720 | 0.805729 | 1.159624e-49 | -8.615850e-47 |
| Msa0218780 | Msa0730430 | 0.810232 | 1.276675e-50 | -8.615850e-47 |
| Msa0218780 | Msa0738040 | 0.808600 | 2.860218e-50 | -8.615850e-47 |
| Msa0218780 | Msa0740640 | 0.808233 | 3.424207e-50 | -8.615850e-47 |
| Msa0218780 | Msa0741900 | 0.800121 | 1.672389e-48 | -8.615850e-47 |
| Msa0218780 | Msa0798430 | 0.816776 | 4.646059e-52 | -8.615850e-47 |
| Msa0218780 | Msa0828560 | 0.821765 | 3.393600e-53 | -8.615850e-47 |
| Msa0218780 | Msa0844240 | 0.808651 | 2.789069e-50 | -8.615850e-47 |
| Msa0218780 | Msa0844560 | 0.811965 | 5.375544e-51 | -8.615850e-47 |
| Msa0218780 | Msa0861870 | 0.801257 | 9.805381e-49 | -8.615850e-47 |
| Msa0218780 | Msa0863930 | 0.813298 | 2.747134e-51 | -8.615850e-47 |
| Msa0218780 | Msa0871270 | 0.804882 | 1.745302e-49 | -8.615850e-47 |
| Msa0218780 | Msa0872310 | 0.807320 | 5.354513e-50 | -8.615850e-47 |
| Msa0218780 | Msa0875620 | 0.805998 | 1.018150e-49 | -8.615850e-47 |
| Msa0218780 | Msa0876190 | 0.814706 | 1.343791e-51 | -8.615850e-47 |
| Msa0218780 | Msa0880140 | 0.845055 | 5.155839e-59 | -8.615850e-47 |
| Msa0218780 | Msa0888530 | 0.809413 | 1.915966e-50 | -8.615850e-47 |
| Msa0218780 | Msa0895790 | 0.820365 | 7.126788e-53 | -8.615850e-47 |
| Msa0218780 | Msa0896970 | 0.817892 | 2.604901e-52 | -8.615850e-47 |
| Msa0218780 | Msa0898730 | 0.802785 | 4.758341e-49 | -8.615850e-47 |
| Msa0218780 | Msa0909120 | 0.810322 | 1.221303e-50 | -8.615850e-47 |
| Msa0218780 | Msa0922410 | 0.801496 | 8.761701e-49 | -8.615850e-47 |
| Msa0218780 | Msa0930780 | 0.805053 | 1.607172e-49 | -8.615850e-47 |
| Msa0218780 | Msa0936410 | 0.834874 | 2.327949e-56 | -8.615850e-47 |
| Msa0218780 | Msa0958360 | 0.801773 | 7.685212e-49 | -8.615850e-47 |
| Msa0218780 | Msa0967380 | 0.804397 | 2.202718e-49 | -8.615850e-47 |
| Msa0218780 | Msa0972670 | 0.801871 | 7.338468e-49 | -8.615850e-47 |
| Msa0218780 | Msa0973250 | 0.820636 | 6.178880e-53 | -8.615850e-47 |
| Msa0218780 | Msa0979010 | 0.805567 | 1.254225e-49 | -8.615850e-47 |
| Msa0218780 | Msa0992020 | 0.807437 | 5.058231e-50 | -8.615850e-47 |
| Msa0218780 | Msa0993290 | 0.808575 | 2.895495e-50 | -8.615850e-47 |
| Msa0218780 | Msa0993600 | 0.807705 | 4.436190e-50 | -8.615850e-47 |
| Msa0218780 | Msa0993730 | 0.806936 | 6.455167e-50 | -8.615850e-47 |
| Msa0218780 | Msa0993750 | 0.805213 | 1.488003e-49 | -8.615850e-47 |
| Msa0218780 | Msa1005870 | 0.801878 | 7.315213e-49 | -8.615850e-47 |
| Msa0218780 | Msa1012700 | 0.809484 | 1.849254e-50 | -8.615850e-47 |
| Msa0218780 | Msa1013770 | 0.801764 | 7.717955e-49 | -8.615850e-47 |
| Msa0218780 | Msa1030970 | 0.814480 | 1.508053e-51 | -8.615850e-47 |
| Msa0218780 | Msa1031930 | 0.800145 | 1.653689e-48 | -8.615850e-47 |
| Msa0218780 | Msa1040830 | 0.803542 | 3.316856e-49 | -8.615850e-47 |
| Msa0218780 | Msa1041530 | 0.814317 | 1.638298e-51 | -8.615850e-47 |
| Msa0218780 | Msa1045200 | 0.817052 | 4.027972e-52 | -8.615850e-47 |
| Msa0218780 | Msa1052360 | 0.816568 | 5.170865e-52 | -8.615850e-47 |
| Msa0218780 | Msa1065390 | 0.820615 | 6.244846e-53 | -8.615850e-47 |
| Msa0218780 | Msa1066490 | 0.815515 | 8.888333e-52 | -8.615850e-47 |
| Msa0218780 | Msa1075540 | 0.800434 | 1.443806e-48 | -8.615850e-47 |
| Msa0218780 | Msa1077150 | 0.816748 | 4.713094e-52 | -8.615850e-47 |
| Msa0218780 | Msa1077180 | 0.805443 | 1.331934e-49 | -8.615850e-47 |
| Msa0218780 | Msa1079590 | 0.844501 | 7.269280e-59 | -8.615850e-47 |
| Msa0218780 | Msa1081570 | 0.822111 | 2.820437e-53 | -8.615850e-47 |
| Msa0218780 | Msa1082500 | 0.813373 | 2.645423e-51 | -8.615850e-47 |
| Msa0218780 | Msa1082700 | 0.808765 | 2.637354e-50 | -8.615850e-47 |
| Msa0218780 | Msa1085200 | 0.843719 | 1.178391e-58 | -8.615850e-47 |
| Msa0218780 | Msa1092010 | 0.806469 | 8.102014e-50 | -8.615850e-47 |
| Msa0218780 | Msa1096210 | 0.809776 | 1.600595e-50 | -8.615850e-47 |
| Msa0218780 | Msa1123380 | 0.805313 | 1.417866e-49 | -8.615850e-47 |
| Msa0218780 | Msa1123880 | 0.826902 | 2.102083e-54 | -8.615850e-47 |
| Msa0218780 | Msa1127140 | 0.826875 | 2.133538e-54 | -8.615850e-47 |
| Msa0218780 | Msa1127890 | 0.800055 | 1.724426e-48 | -8.615850e-47 |
| Msa0218780 | Msa1134110 | 0.823024 | 1.730717e-53 | -8.615850e-47 |
| Msa0218780 | Msa1139810 | 0.807267 | 5.495338e-50 | -8.615850e-47 |
| Msa0218780 | Msa1140210 | 0.801445 | 8.973323e-49 | -8.615850e-47 |
| Msa0218780 | Msa1151910 | 0.815854 | 7.468146e-52 | -8.615850e-47 |
| Msa0218780 | Msa1166400 | 0.829453 | 5.104827e-55 | -8.615850e-47 |
| Msa0218780 | Msa1168160 | 0.824138 | 9.491893e-54 | -8.615850e-47 |
| Msa0218780 | Msa1176160 | 0.810099 | 1.364027e-50 | -8.615850e-47 |
| Msa0218780 | Msa1189070 | 0.806234 | 9.081616e-50 | -8.615850e-47 |
| Msa0218780 | Msa1190400 | 0.801254 | 9.819328e-49 | -8.615850e-47 |
| Msa0218780 | Msa1200440 | 0.815433 | 9.267714e-52 | -8.615850e-47 |
| Msa0218780 | Msa1201110 | 0.803853 | 2.858724e-49 | -8.615850e-47 |
| Msa0218780 | Msa1209460 | 0.804937 | 1.699488e-49 | -8.615850e-47 |
| Msa0218780 | Msa1211150 | -0.807566 | 4.747220e-50 | -8.615850e-47 |
| Msa0218780 | Msa1233560 | 0.804167 | 2.460078e-49 | -8.615850e-47 |
| Msa0218780 | Msa1236100 | 0.849187 | 3.797113e-60 | -8.615850e-47 |
| Msa0218780 | Msa1239920 | 0.802014 | 6.858215e-49 | -8.615850e-47 |
| Msa0218780 | Msa1242220 | 0.829164 | 5.999351e-55 | -8.615850e-47 |
| Msa0218780 | Msa1264020 | 0.801974 | 6.990275e-49 | -8.615850e-47 |
| Msa0218780 | Msa1271280 | 0.820378 | 7.080322e-53 | -8.615850e-47 |
| Msa0218780 | Msa1271990 | 0.809926 | 1.485831e-50 | -8.615850e-47 |
| Msa0218780 | Msa1276660 | 0.819673 | 1.026567e-52 | -8.615850e-47 |
| Msa0218780 | Msa1278840 | 0.802145 | 6.446427e-49 | -8.615850e-47 |
| Msa0218780 | Msa1283840 | 0.821395 | 4.130390e-53 | -8.615850e-47 |
| Msa0218780 | Msa1283860 | 0.803027 | 4.239895e-49 | -8.615850e-47 |
| Msa0218780 | Msa1284260 | 0.805438 | 1.334664e-49 | -8.615850e-47 |
| Msa0218780 | Msa1294900 | 0.814186 | 1.751195e-51 | -8.615850e-47 |
| Msa0218780 | Msa1299300 | -0.801763 | 7.723531e-49 | -8.615850e-47 |
| Msa0218780 | Msa1303250 | 0.812085 | 5.063125e-51 | -8.615850e-47 |
| Msa0218780 | Msa1305510 | 0.801043 | 1.084440e-48 | -8.615850e-47 |
| Msa0218780 | Msa1307190 | 0.812488 | 4.133652e-51 | -8.615850e-47 |
| Msa0218780 | Msa1308380 | 0.820559 | 6.433192e-53 | -8.615850e-47 |
| Msa0218780 | Msa1320410 | 0.829763 | 4.292046e-55 | -8.615850e-47 |
| Msa0218780 | Msa1322860 | 0.806279 | 8.886181e-50 | -8.615850e-47 |
| Msa0218780 | Msa1322890 | 0.820749 | 5.820102e-53 | -8.615850e-47 |
| Msa0218780 | Msa1327050 | 0.812747 | 3.629385e-51 | -8.615850e-47 |
| Msa0218780 | Msa1340650 | 0.800913 | 1.152807e-48 | -8.615850e-47 |
| Msa0218780 | Msa1342900 | 0.805543 | 1.268604e-49 | -8.615850e-47 |
| Msa0218780 | Msa1346370 | 0.817750 | 2.805017e-52 | -8.615850e-47 |
| Msa0218780 | Msa1351760 | 0.810718 | 1.002990e-50 | -8.615850e-47 |
| Msa0218780 | Msa1361400 | 0.801430 | 9.037427e-49 | -8.615850e-47 |
| Msa0218780 | Msa1372760 | 0.807181 | 5.731258e-50 | -8.615850e-47 |
| Msa0218780 | Msa1374550 | 0.810891 | 9.199758e-51 | -8.615850e-47 |
| Msa0218780 | Msa1398340 | 0.817471 | 3.242104e-52 | -8.615850e-47 |
| Msa0218780 | Msa1420060 | 0.816167 | 6.359108e-52 | -8.615850e-47 |
| Msa0218780 | Msa1421550 | 0.812198 | 4.782834e-51 | -8.615850e-47 |
| Msa0218780 | Msa1448510 | 0.804473 | 2.123861e-49 | -8.615850e-47 |
| Msa0218780 | Msa1460020 | 0.818950 | 1.500228e-52 | -8.615850e-47 |
| Msa0218780 | Msa1461300 | 0.813466 | 2.524062e-51 | -8.615850e-47 |
| Msa0218780 | Msa1464810 | 0.804177 | 2.448497e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0218780 | MtrunA17_Chr2g0321051 | 99.099 | 111 | 1 | 0 | 1 | 111 | 1 | 111 | 4.75e-75 | 217 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0218780 | AT5G22580.1 | 65.657 | 99 | 34 | 0 | 7 | 105 | 6 | 104 | 5.51e-42 | 134 |
| Msa0218780 | AT3G17210.1 | 42.000 | 100 | 54 | 2 | 8 | 104 | 9 | 107 | 3.51e-22 | 84.0 |
| Msa0218780 | AT3G17210.2 | 42.000 | 100 | 54 | 2 | 8 | 104 | 9 | 107 | 3.51e-22 | 84.0 |
Find 43 sgRNAs with CRISPR-Local
Find 150 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAATATATAAGCACAATTT+AGG | 0.140551 | 2_1:+66227738 | None:intergenic |
| CTAAATTGTGCTTATATATT+AGG | 0.165553 | 2_1:-66227737 | Msa0218780:five_prime_UTR |
| GATTATGCTGCTTCCTTGAC+TGG | 0.289662 | 2_1:+66226774 | None:intergenic |
| AGAAGTTACATAATTGATTA+TGG | 0.298058 | 2_1:-66227838 | Msa0218780:five_prime_UTR |
| TACAAAAGGGATGGAGAAAT+TGG | 0.322091 | 2_1:-66227613 | Msa0218780:CDS |
| AATCATATCCATTGATTAGA+AGG | 0.325835 | 2_1:+66226575 | None:intergenic |
| AATAATGAATTATTTATTGT+TGG | 0.345498 | 2_1:+66226736 | None:intergenic |
| TAATATATAAGCACAATTTA+GGG | 0.373646 | 2_1:+66227739 | None:intergenic |
| AAGCTTTACTTCACAAAGAA+TGG | 0.408647 | 2_1:-66227703 | Msa0218780:exon |
| ACTGGCTTGACAAGGGTTGA+TGG | 0.410675 | 2_1:+66226792 | None:intergenic |
| CTTCCTTGACTGGCTTGACA+AGG | 0.415501 | 2_1:+66226784 | None:intergenic |
| ATTTGTATGGTAAAAGATAA+GGG | 0.415631 | 2_1:-66226602 | Msa0218780:three_prime_UTR |
| AGGGTTTGCCTTCTAATCAA+TGG | 0.422168 | 2_1:-66226583 | Msa0218780:three_prime_UTR |
| ATCTTGTCAAATCCTTTGAA+TGG | 0.422994 | 2_1:-66227578 | Msa0218780:intron |
| TTTGTACTGTGATATTTGTA+TGG | 0.444698 | 2_1:-66226615 | Msa0218780:three_prime_UTR |
| CTTGTTGAATGTCATCAAGA+AGG | 0.457412 | 2_1:+66226911 | None:intergenic |
| GTGATTGTTAAGTTCAAAGA+AGG | 0.458164 | 2_1:-66227654 | Msa0218780:CDS |
| TATTTGTATGGTAAAAGATA+AGG | 0.471222 | 2_1:-66226603 | Msa0218780:three_prime_UTR |
| ATTACTGAACTACGAACATA+AGG | 0.473723 | 2_1:+66226667 | None:intergenic |
| GTAGTGGAAGAGCTTACAAA+AGG | 0.480357 | 2_1:-66227627 | Msa0218780:CDS |
| GTTCAAAGAAGGTGTAGTAG+TGG | 0.481023 | 2_1:-66227643 | Msa0218780:CDS |
| GACTCATTTCATTACTATGT+TGG | 0.483365 | 2_1:+66227815 | None:intergenic |
| GGGACAGGATATTGAAAGCC+TGG | 0.493701 | 2_1:-66226961 | Msa0218780:CDS |
| TCAGAGAACTCAACATGACT+TGG | 0.494285 | 2_1:+66226858 | None:intergenic |
| AACCTTGTCTCAACACATCC+AGG | 0.501843 | 2_1:+66226943 | None:intergenic |
| AAGCACAATTTAGGGTTCAA+AGG | 0.525734 | 2_1:+66227747 | None:intergenic |
| ATAGTAATGAAATGAGTCGT+GGG | 0.527643 | 2_1:-66227810 | Msa0218780:five_prime_UTR |
| CTGGCTTGACAAGGGTTGAT+GGG | 0.538605 | 2_1:+66226793 | None:intergenic |
| TTCCTTGACTGGCTTGACAA+GGG | 0.547981 | 2_1:+66226785 | None:intergenic |
| TATTAGACGTTGACACATGT+TGG | 0.550823 | 2_1:-66227890 | Msa0218780:five_prime_UTR |
| ATTGACAGATCAAGACAGTA+AGG | 0.554102 | 2_1:-66227778 | Msa0218780:five_prime_UTR |
| AGAACTCAACATGACTTGGA+TGG | 0.554383 | 2_1:+66226862 | None:intergenic |
| GTATGTCTTATACAGGGGAC+AGG | 0.555403 | 2_1:-66226976 | Msa0218780:intron |
| TTCACAAAGAATGGTAGTCA+TGG | 0.559784 | 2_1:-66227694 | Msa0218780:exon |
| CGTTGACACATGTTGGACAC+TGG | 0.574307 | 2_1:-66227883 | Msa0218780:five_prime_UTR |
| GTATAAAACATACCATTCAA+AGG | 0.584418 | 2_1:+66227566 | None:intergenic |
| AACCCTTGTCAAGCCAGTCA+AGG | 0.586460 | 2_1:-66226787 | Msa0218780:CDS |
| TAGTGGAAGAGCTTACAAAA+GGG | 0.588758 | 2_1:-66227626 | Msa0218780:CDS |
| GGAAGAGCTTACAAAAGGGA+TGG | 0.589362 | 2_1:-66227622 | Msa0218780:CDS |
| CATAGTAATGAAATGAGTCG+TGG | 0.608824 | 2_1:-66227811 | Msa0218780:five_prime_UTR |
| AGCCTGGATGTGTTGAGACA+AGG | 0.635747 | 2_1:-66226945 | Msa0218780:CDS |
| ACAAAGAATGGTAGTCATGG+AGG | 0.636423 | 2_1:-66227691 | Msa0218780:exon |
| TAGTAATGAAATGAGTCGTG+GGG | 0.683523 | 2_1:-66227809 | Msa0218780:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATGAATTATTTATTGT+TGG | + | chr2_1:66227586-66227605 | None:intergenic | 10.0% |
| !! | AATAATGAATTATTTATTGT+TGG | + | chr2_1:66227586-66227605 | None:intergenic | 10.0% |
| !! | TAATATATAAGCACAATTTA+GGG | + | chr2_1:66226583-66226602 | None:intergenic | 15.0% |
| !! | TAATATATAAGCACAATTTA+GGG | + | chr2_1:66226583-66226602 | None:intergenic | 15.0% |
| !! | AGAAGTTACATAATTGATTA+TGG | - | chr2_1:66226481-66226500 | Msa0218780:three_prime_UTR | 20.0% |
| !! | CTAATATATAAGCACAATTT+AGG | + | chr2_1:66226584-66226603 | None:intergenic | 20.0% |
| !! | CTAAATTGTGCTTATATATT+AGG | - | chr2_1:66226582-66226601 | Msa0218780:three_prime_UTR | 20.0% |
| !! | AAAAACTATCAGTATCTATA+AGG | + | chr2_1:66226871-66226890 | None:intergenic | 20.0% |
| !! | AACAAAGACAGTAATTTAAA+GGG | - | chr2_1:66226954-66226973 | Msa0218780:CDS | 20.0% |
| !!! | ACATCAAAAGATTTGATTTT+GGG | - | chr2_1:66227074-66227093 | Msa0218780:intron | 20.0% |
| !! | ATGTGATGATTATGATTATT+TGG | - | chr2_1:66227256-66227275 | Msa0218780:intron | 20.0% |
| !! | TATTTGTATGGTAAAAGATA+AGG | - | chr2_1:66227716-66227735 | Msa0218780:five_prime_UTR | 20.0% |
| !! | ATTTGTATGGTAAAAGATAA+GGG | - | chr2_1:66227717-66227736 | Msa0218780:five_prime_UTR | 20.0% |
| !! | AGAAGTTACATAATTGATTA+TGG | - | chr2_1:66226481-66226500 | Msa0218780:three_prime_UTR | 20.0% |
| !! | CTAATATATAAGCACAATTT+AGG | + | chr2_1:66226584-66226603 | None:intergenic | 20.0% |
| !! | CTAAATTGTGCTTATATATT+AGG | - | chr2_1:66226582-66226601 | Msa0218780:three_prime_UTR | 20.0% |
| !! | AAAAACTATCAGTATCTATA+AGG | + | chr2_1:66226871-66226890 | None:intergenic | 20.0% |
| !! | AACAAAGACAGTAATTTAAA+GGG | - | chr2_1:66226954-66226973 | Msa0218780:CDS | 20.0% |
| !!! | ACATCAAAAGATTTGATTTT+GGG | - | chr2_1:66227074-66227093 | Msa0218780:intron | 20.0% |
| !! | ATGTGATGATTATGATTATT+TGG | - | chr2_1:66227256-66227275 | Msa0218780:intron | 20.0% |
| !! | TATTTGTATGGTAAAAGATA+AGG | - | chr2_1:66227716-66227735 | Msa0218780:five_prime_UTR | 20.0% |
| !! | ATTTGTATGGTAAAAGATAA+GGG | - | chr2_1:66227717-66227736 | Msa0218780:five_prime_UTR | 20.0% |
| ! | GTATAAAACATACCATTCAA+AGG | + | chr2_1:66226756-66226775 | None:intergenic | 25.0% |
| !! | TACCTTTTATATTATGCAAG+AGG | - | chr2_1:66226779-66226798 | Msa0218780:CDS | 25.0% |
| ! | CTATAAGGTTAATAAACTGA+AGG | + | chr2_1:66226856-66226875 | None:intergenic | 25.0% |
| ! | TCTGTTATCAAATATATCAG+TGG | + | chr2_1:66226907-66226926 | None:intergenic | 25.0% |
| ! | TAACAGAAACAGAAATAACA+AGG | - | chr2_1:66226920-66226939 | Msa0218780:CDS | 25.0% |
| ! | AACAGAAACAGAAATAACAA+GGG | - | chr2_1:66226921-66226940 | Msa0218780:CDS | 25.0% |
| ! | GAACAAAGACAGTAATTTAA+AGG | - | chr2_1:66226953-66226972 | Msa0218780:CDS | 25.0% |
| ! | ACTGAGATTTATAGCTAAAT+AGG | - | chr2_1:66227020-66227039 | Msa0218780:intron | 25.0% |
| !!! | GACATCAAAAGATTTGATTT+TGG | - | chr2_1:66227073-66227092 | Msa0218780:intron | 25.0% |
| ! | TGATATGATAGTACTAAGTA+GGG | + | chr2_1:66227307-66227326 | None:intergenic | 25.0% |
| ! | ATGATATGATAGTACTAAGT+AGG | + | chr2_1:66227308-66227327 | None:intergenic | 25.0% |
| ! | TAATCAAGTATGTCTTATAC+AGG | - | chr2_1:66227336-66227355 | Msa0218780:intron | 25.0% |
| ! | AATCAAGTATGTCTTATACA+GGG | - | chr2_1:66227337-66227356 | Msa0218780:intron | 25.0% |
| ! | TTTGTACTGTGATATTTGTA+TGG | - | chr2_1:66227704-66227723 | Msa0218780:exon | 25.0% |
| !! | AATCATATCCATTGATTAGA+AGG | + | chr2_1:66227747-66227766 | None:intergenic | 25.0% |
| ! | GTATAAAACATACCATTCAA+AGG | + | chr2_1:66226756-66226775 | None:intergenic | 25.0% |
| !! | TACCTTTTATATTATGCAAG+AGG | - | chr2_1:66226779-66226798 | Msa0218780:CDS | 25.0% |
| ! | CTATAAGGTTAATAAACTGA+AGG | + | chr2_1:66226856-66226875 | None:intergenic | 25.0% |
| ! | TCTGTTATCAAATATATCAG+TGG | + | chr2_1:66226907-66226926 | None:intergenic | 25.0% |
| ! | TAACAGAAACAGAAATAACA+AGG | - | chr2_1:66226920-66226939 | Msa0218780:CDS | 25.0% |
| ! | AACAGAAACAGAAATAACAA+GGG | - | chr2_1:66226921-66226940 | Msa0218780:CDS | 25.0% |
| ! | GAACAAAGACAGTAATTTAA+AGG | - | chr2_1:66226953-66226972 | Msa0218780:CDS | 25.0% |
| ! | ACTGAGATTTATAGCTAAAT+AGG | - | chr2_1:66227020-66227039 | Msa0218780:intron | 25.0% |
| !!! | GACATCAAAAGATTTGATTT+TGG | - | chr2_1:66227073-66227092 | Msa0218780:intron | 25.0% |
| ! | TGATATGATAGTACTAAGTA+GGG | + | chr2_1:66227307-66227326 | None:intergenic | 25.0% |
| ! | ATGATATGATAGTACTAAGT+AGG | + | chr2_1:66227308-66227327 | None:intergenic | 25.0% |
| ! | TAATCAAGTATGTCTTATAC+AGG | - | chr2_1:66227336-66227355 | Msa0218780:intron | 25.0% |
| ! | AATCAAGTATGTCTTATACA+GGG | - | chr2_1:66227337-66227356 | Msa0218780:intron | 25.0% |
| ! | TTTGTACTGTGATATTTGTA+TGG | - | chr2_1:66227704-66227723 | Msa0218780:exon | 25.0% |
| !! | AATCATATCCATTGATTAGA+AGG | + | chr2_1:66227747-66227766 | None:intergenic | 25.0% |
| GACTCATTTCATTACTATGT+TGG | + | chr2_1:66226507-66226526 | None:intergenic | 30.0% | |
| ATAGTAATGAAATGAGTCGT+GGG | - | chr2_1:66226509-66226528 | Msa0218780:three_prime_UTR | 30.0% | |
| AAGCTTTACTTCACAAAGAA+TGG | - | chr2_1:66226616-66226635 | Msa0218780:three_prime_UTR | 30.0% | |
| GTGATTGTTAAGTTCAAAGA+AGG | - | chr2_1:66226665-66226684 | Msa0218780:three_prime_UTR | 30.0% | |
| ATCTTGTCAAATCCTTTGAA+TGG | - | chr2_1:66226741-66226760 | Msa0218780:three_prime_UTR | 30.0% | |
| TGCCTCTTGCATAATATAAA+AGG | + | chr2_1:66226784-66226803 | None:intergenic | 30.0% | |
| ATCAAGTATGTCTTATACAG+GGG | - | chr2_1:66227338-66227357 | Msa0218780:intron | 30.0% | |
| ATTACTGAACTACGAACATA+AGG | + | chr2_1:66227655-66227674 | None:intergenic | 30.0% | |
| GACTCATTTCATTACTATGT+TGG | + | chr2_1:66226507-66226526 | None:intergenic | 30.0% | |
| ATAGTAATGAAATGAGTCGT+GGG | - | chr2_1:66226509-66226528 | Msa0218780:three_prime_UTR | 30.0% | |
| AAGCTTTACTTCACAAAGAA+TGG | - | chr2_1:66226616-66226635 | Msa0218780:three_prime_UTR | 30.0% | |
| GTGATTGTTAAGTTCAAAGA+AGG | - | chr2_1:66226665-66226684 | Msa0218780:three_prime_UTR | 30.0% | |
| ATCTTGTCAAATCCTTTGAA+TGG | - | chr2_1:66226741-66226760 | Msa0218780:three_prime_UTR | 30.0% | |
| TGCCTCTTGCATAATATAAA+AGG | + | chr2_1:66226784-66226803 | None:intergenic | 30.0% | |
| ATCAAGTATGTCTTATACAG+GGG | - | chr2_1:66227338-66227357 | Msa0218780:intron | 30.0% | |
| ATTACTGAACTACGAACATA+AGG | + | chr2_1:66227655-66227674 | None:intergenic | 30.0% | |
| CATAGTAATGAAATGAGTCG+TGG | - | chr2_1:66226508-66226527 | Msa0218780:three_prime_UTR | 35.0% | |
| TAGTAATGAAATGAGTCGTG+GGG | - | chr2_1:66226510-66226529 | Msa0218780:three_prime_UTR | 35.0% | |
| ATTGACAGATCAAGACAGTA+AGG | - | chr2_1:66226541-66226560 | Msa0218780:three_prime_UTR | 35.0% | |
| ! | AAGCACAATTTAGGGTTCAA+AGG | + | chr2_1:66226575-66226594 | None:intergenic | 35.0% |
| TTCACAAAGAATGGTAGTCA+TGG | - | chr2_1:66226625-66226644 | Msa0218780:three_prime_UTR | 35.0% | |
| TAGTGGAAGAGCTTACAAAA+GGG | - | chr2_1:66226693-66226712 | Msa0218780:three_prime_UTR | 35.0% | |
| TACAAAAGGGATGGAGAAAT+TGG | - | chr2_1:66226706-66226725 | Msa0218780:three_prime_UTR | 35.0% | |
| ! | TTGATTTTGGGCTTACATCA+CGG | - | chr2_1:66227086-66227105 | Msa0218780:intron | 35.0% |
| ! | GTATACGATTAGTTGTGACT+TGG | + | chr2_1:66227192-66227211 | None:intergenic | 35.0% |
| CTTGTTGAATGTCATCAAGA+AGG | + | chr2_1:66227411-66227430 | None:intergenic | 35.0% | |
| CATAGTAATGAAATGAGTCG+TGG | - | chr2_1:66226508-66226527 | Msa0218780:three_prime_UTR | 35.0% | |
| TAGTAATGAAATGAGTCGTG+GGG | - | chr2_1:66226510-66226529 | Msa0218780:three_prime_UTR | 35.0% | |
| ATTGACAGATCAAGACAGTA+AGG | - | chr2_1:66226541-66226560 | Msa0218780:three_prime_UTR | 35.0% | |
| ! | AAGCACAATTTAGGGTTCAA+AGG | + | chr2_1:66226575-66226594 | None:intergenic | 35.0% |
| TTCACAAAGAATGGTAGTCA+TGG | - | chr2_1:66226625-66226644 | Msa0218780:three_prime_UTR | 35.0% | |
| TAGTGGAAGAGCTTACAAAA+GGG | - | chr2_1:66226693-66226712 | Msa0218780:three_prime_UTR | 35.0% | |
| TACAAAAGGGATGGAGAAAT+TGG | - | chr2_1:66226706-66226725 | Msa0218780:three_prime_UTR | 35.0% | |
| ! | TTGATTTTGGGCTTACATCA+CGG | - | chr2_1:66227086-66227105 | Msa0218780:intron | 35.0% |
| ! | GTATACGATTAGTTGTGACT+TGG | + | chr2_1:66227192-66227211 | None:intergenic | 35.0% |
| CTTGTTGAATGTCATCAAGA+AGG | + | chr2_1:66227411-66227430 | None:intergenic | 35.0% | |
| ACAAAGAATGGTAGTCATGG+AGG | - | chr2_1:66226628-66226647 | Msa0218780:three_prime_UTR | 40.0% | |
| ! | GTTCAAAGAAGGTGTAGTAG+TGG | - | chr2_1:66226676-66226695 | Msa0218780:three_prime_UTR | 40.0% |
| ! | GTAGTGGAAGAGCTTACAAA+AGG | - | chr2_1:66226692-66226711 | Msa0218780:three_prime_UTR | 40.0% |
| ! | ATCTTTTGATGTCTTCGCGT+TGG | + | chr2_1:66227066-66227085 | None:intergenic | 40.0% |
| !! | GATTAGTTGTGACTTGGTGT+CGG | + | chr2_1:66227186-66227205 | None:intergenic | 40.0% |
| ! | AGAACTCAACATGACTTGGA+TGG | + | chr2_1:66227460-66227479 | None:intergenic | 40.0% |
| TCAGAGAACTCAACATGACT+TGG | + | chr2_1:66227464-66227483 | None:intergenic | 40.0% | |
| AGGGTTTGCCTTCTAATCAA+TGG | - | chr2_1:66227736-66227755 | Msa0218780:five_prime_UTR | 40.0% | |
| ACAAAGAATGGTAGTCATGG+AGG | - | chr2_1:66226628-66226647 | Msa0218780:three_prime_UTR | 40.0% | |
| ! | GTTCAAAGAAGGTGTAGTAG+TGG | - | chr2_1:66226676-66226695 | Msa0218780:three_prime_UTR | 40.0% |
| ! | GTAGTGGAAGAGCTTACAAA+AGG | - | chr2_1:66226692-66226711 | Msa0218780:three_prime_UTR | 40.0% |
| ! | ATCTTTTGATGTCTTCGCGT+TGG | + | chr2_1:66227066-66227085 | None:intergenic | 40.0% |
| !! | GATTAGTTGTGACTTGGTGT+CGG | + | chr2_1:66227186-66227205 | None:intergenic | 40.0% |
| ! | AGAACTCAACATGACTTGGA+TGG | + | chr2_1:66227460-66227479 | None:intergenic | 40.0% |
| TCAGAGAACTCAACATGACT+TGG | + | chr2_1:66227464-66227483 | None:intergenic | 40.0% | |
| AGGGTTTGCCTTCTAATCAA+TGG | - | chr2_1:66227736-66227755 | Msa0218780:five_prime_UTR | 40.0% | |
| GGAAGAGCTTACAAAAGGGA+TGG | - | chr2_1:66226697-66226716 | Msa0218780:three_prime_UTR | 45.0% | |
| AGCTAAATAGGCCTCGATTG+CGG | - | chr2_1:66227032-66227051 | Msa0218780:intron | 45.0% | |
| !! | ATGTCTTCGCGTTGGTAATG+TGG | + | chr2_1:66227058-66227077 | None:intergenic | 45.0% |
| CGGTTGTAGACTCGTAGTTA+TGG | - | chr2_1:66227106-66227125 | Msa0218780:intron | 45.0% | |
| GTATGTCTTATACAGGGGAC+AGG | - | chr2_1:66227343-66227362 | Msa0218780:intron | 45.0% | |
| AACCTTGTCTCAACACATCC+AGG | + | chr2_1:66227379-66227398 | None:intergenic | 45.0% | |
| !! | TTCCTTGACTGGCTTGACAA+GGG | + | chr2_1:66227537-66227556 | None:intergenic | 45.0% |
| ! | GATTATGCTGCTTCCTTGAC+TGG | + | chr2_1:66227548-66227567 | None:intergenic | 45.0% |
| GGAAGAGCTTACAAAAGGGA+TGG | - | chr2_1:66226697-66226716 | Msa0218780:three_prime_UTR | 45.0% | |
| AGCTAAATAGGCCTCGATTG+CGG | - | chr2_1:66227032-66227051 | Msa0218780:intron | 45.0% | |
| !! | ATGTCTTCGCGTTGGTAATG+TGG | + | chr2_1:66227058-66227077 | None:intergenic | 45.0% |
| CGGTTGTAGACTCGTAGTTA+TGG | - | chr2_1:66227106-66227125 | Msa0218780:intron | 45.0% | |
| GTATGTCTTATACAGGGGAC+AGG | - | chr2_1:66227343-66227362 | Msa0218780:intron | 45.0% | |
| AACCTTGTCTCAACACATCC+AGG | + | chr2_1:66227379-66227398 | None:intergenic | 45.0% | |
| !! | TTCCTTGACTGGCTTGACAA+GGG | + | chr2_1:66227537-66227556 | None:intergenic | 45.0% |
| ! | GATTATGCTGCTTCCTTGAC+TGG | + | chr2_1:66227548-66227567 | None:intergenic | 45.0% |
| CGTTGACACATGTTGGACAC+TGG | - | chr2_1:66226436-66226455 | Msa0218780:three_prime_UTR | 50.0% | |
| AAGGGAAATTCCCCAACCAG+AGG | - | chr2_1:66226972-66226991 | Msa0218780:intron | 50.0% | |
| AATTCCCCAACCAGAGGTTG+CGG | - | chr2_1:66226978-66226997 | Msa0218780:intron | 50.0% | |
| AGAGGTTGCGGTCATGTTCA+CGG | - | chr2_1:66226990-66227009 | Msa0218780:intron | 50.0% | |
| GGGACAGGATATTGAAAGCC+TGG | - | chr2_1:66227358-66227377 | Msa0218780:intron | 50.0% | |
| AGCCTGGATGTGTTGAGACA+AGG | - | chr2_1:66227374-66227393 | Msa0218780:intron | 50.0% | |
| ! | CTGGCTTGACAAGGGTTGAT+GGG | + | chr2_1:66227529-66227548 | None:intergenic | 50.0% |
| !! | ACTGGCTTGACAAGGGTTGA+TGG | + | chr2_1:66227530-66227549 | None:intergenic | 50.0% |
| AACCCTTGTCAAGCCAGTCA+AGG | - | chr2_1:66227532-66227551 | Msa0218780:intron | 50.0% | |
| !! | CTTCCTTGACTGGCTTGACA+AGG | + | chr2_1:66227538-66227557 | None:intergenic | 50.0% |
| CGTTGACACATGTTGGACAC+TGG | - | chr2_1:66226436-66226455 | Msa0218780:three_prime_UTR | 50.0% | |
| AAGGGAAATTCCCCAACCAG+AGG | - | chr2_1:66226972-66226991 | Msa0218780:intron | 50.0% | |
| AATTCCCCAACCAGAGGTTG+CGG | - | chr2_1:66226978-66226997 | Msa0218780:intron | 50.0% | |
| AGAGGTTGCGGTCATGTTCA+CGG | - | chr2_1:66226990-66227009 | Msa0218780:intron | 50.0% | |
| GGGACAGGATATTGAAAGCC+TGG | - | chr2_1:66227358-66227377 | Msa0218780:intron | 50.0% | |
| AGCCTGGATGTGTTGAGACA+AGG | - | chr2_1:66227374-66227393 | Msa0218780:intron | 50.0% | |
| ! | CTGGCTTGACAAGGGTTGAT+GGG | + | chr2_1:66227529-66227548 | None:intergenic | 50.0% |
| !! | ACTGGCTTGACAAGGGTTGA+TGG | + | chr2_1:66227530-66227549 | None:intergenic | 50.0% |
| AACCCTTGTCAAGCCAGTCA+AGG | - | chr2_1:66227532-66227551 | Msa0218780:intron | 50.0% | |
| !! | CTTCCTTGACTGGCTTGACA+AGG | + | chr2_1:66227538-66227557 | None:intergenic | 50.0% |
| ATGACCGCAACCTCTGGTTG+GGG | + | chr2_1:66226985-66227004 | None:intergenic | 55.0% | |
| CATGACCGCAACCTCTGGTT+GGG | + | chr2_1:66226986-66227005 | None:intergenic | 55.0% | |
| ACATGACCGCAACCTCTGGT+TGG | + | chr2_1:66226987-66227006 | None:intergenic | 55.0% | |
| GTGAACATGACCGCAACCTC+TGG | + | chr2_1:66226991-66227010 | None:intergenic | 55.0% | |
| ! | TGGTAATGTGGCCGCAATCG+AGG | + | chr2_1:66227046-66227065 | None:intergenic | 55.0% |
| ATGACCGCAACCTCTGGTTG+GGG | + | chr2_1:66226985-66227004 | None:intergenic | 55.0% | |
| CATGACCGCAACCTCTGGTT+GGG | + | chr2_1:66226986-66227005 | None:intergenic | 55.0% | |
| ACATGACCGCAACCTCTGGT+TGG | + | chr2_1:66226987-66227006 | None:intergenic | 55.0% | |
| GTGAACATGACCGCAACCTC+TGG | + | chr2_1:66226991-66227010 | None:intergenic | 55.0% | |
| ! | TGGTAATGTGGCCGCAATCG+AGG | + | chr2_1:66227046-66227065 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 66226431 | 66227910 | 66226431 | ID=Msa0218780;Name=Msa0218780 |
| chr2_1 | mRNA | 66226431 | 66227910 | 66226431 | ID=Msa0218780-mRNA-1;Parent=Msa0218780;Name=Msa0218780-mRNA-1;_AED=0.00;_eAED=0.00;_QI=204|1|1|1|1|1|2|345|111 |
| chr2_1 | exon | 66226431 | 66226983 | 66226431 | ID=Msa0218780-mRNA-1:exon:18615;Parent=Msa0218780-mRNA-1 |
| chr2_1 | exon | 66227579 | 66227910 | 66227579 | ID=Msa0218780-mRNA-1:exon:18614;Parent=Msa0218780-mRNA-1 |
| chr2_1 | five_prime_UTR | 66227707 | 66227910 | 66227707 | ID=Msa0218780-mRNA-1:five_prime_utr;Parent=Msa0218780-mRNA-1 |
| chr2_1 | CDS | 66227579 | 66227706 | 66227579 | ID=Msa0218780-mRNA-1:cds;Parent=Msa0218780-mRNA-1 |
| chr2_1 | CDS | 66226776 | 66226983 | 66226776 | ID=Msa0218780-mRNA-1:cds;Parent=Msa0218780-mRNA-1 |
| chr2_1 | three_prime_UTR | 66226431 | 66226775 | 66226431 | ID=Msa0218780-mRNA-1:three_prime_utr;Parent=Msa0218780-mRNA-1 |
| Gene Sequence |
| Protein sequence |
