Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0844560 | GAU49420.1 | 80.258 | 233 | 37 | 3 | 1 | 225 | 1 | 232 | 1.01e-127 | 370 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0844560 | sp|Q9FUS9|GSTUI_ARATH | 54.091 | 220 | 93 | 2 | 1 | 213 | 1 | 219 | 4.71e-76 | 231 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0844560 | A0A2Z6PF61 | 80.258 | 233 | 37 | 3 | 1 | 225 | 1 | 232 | 4.81e-128 | 370 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002930 | Msa0844560 | 0.819309 | 1.242934e-52 | -8.615850e-47 |
| Msa0007480 | Msa0844560 | 0.803371 | 3.598506e-49 | -8.615850e-47 |
| Msa0017510 | Msa0844560 | 0.860108 | 2.599439e-63 | -8.615850e-47 |
| Msa0019600 | Msa0844560 | 0.842906 | 1.942323e-58 | -8.615850e-47 |
| Msa0032840 | Msa0844560 | -0.800903 | 1.158620e-48 | -8.615850e-47 |
| Msa0046100 | Msa0844560 | 0.824139 | 9.490999e-54 | -8.615850e-47 |
| Msa0046750 | Msa0844560 | 0.805115 | 1.559537e-49 | -8.615850e-47 |
| Msa0089630 | Msa0844560 | 0.804342 | 2.262363e-49 | -8.615850e-47 |
| Msa0094140 | Msa0844560 | 0.802526 | 5.380014e-49 | -8.615850e-47 |
| Msa0106790 | Msa0844560 | 0.800324 | 1.520073e-48 | -8.615850e-47 |
| Msa0110970 | Msa0844560 | 0.850242 | 1.927850e-60 | -8.615850e-47 |
| Msa0114540 | Msa0844560 | -0.809487 | 1.846760e-50 | -8.615850e-47 |
| Msa0614250 | Msa0844560 | 0.800292 | 1.543356e-48 | -8.615850e-47 |
| Msa0641250 | Msa0844560 | 0.834426 | 3.017806e-56 | -8.615850e-47 |
| Msa0641360 | Msa0844560 | 0.804368 | 2.234063e-49 | -8.615850e-47 |
| Msa0669840 | Msa0844560 | 0.840275 | 9.591574e-58 | -8.615850e-47 |
| Msa0680150 | Msa0844560 | 0.800200 | 1.611165e-48 | -8.615850e-47 |
| Msa0707220 | Msa0844560 | 0.810645 | 1.039892e-50 | -8.615850e-47 |
| Msa0720040 | Msa0844560 | 0.807317 | 5.362327e-50 | -8.615850e-47 |
| Msa0737190 | Msa0844560 | 0.800271 | 1.558246e-48 | -8.615850e-47 |
| Msa0739580 | Msa0844560 | 0.808786 | 2.610274e-50 | -8.615850e-47 |
| Msa0764820 | Msa0844560 | 0.863360 | 2.631376e-64 | -8.615850e-47 |
| Msa0770290 | Msa0844560 | 0.819781 | 9.697670e-53 | -8.615850e-47 |
| Msa0778930 | Msa0844560 | 0.821911 | 3.138408e-53 | -8.615850e-47 |
| Msa0786500 | Msa0844560 | 0.814735 | 1.324426e-51 | -8.615850e-47 |
| Msa0130570 | Msa0844560 | 0.803532 | 3.333668e-49 | -8.615850e-47 |
| Msa0140780 | Msa0844560 | 0.801638 | 8.193056e-49 | -8.615850e-47 |
| Msa0147560 | Msa0844560 | 0.820843 | 5.535998e-53 | -8.615850e-47 |
| Msa0157290 | Msa0844560 | 0.860126 | 2.566298e-63 | -8.615850e-47 |
| Msa0157300 | Msa0844560 | 0.802298 | 5.995426e-49 | -8.615850e-47 |
| Msa0185490 | Msa0844560 | 0.803755 | 2.995895e-49 | -8.615850e-47 |
| Msa0197230 | Msa0844560 | 0.803492 | 3.396616e-49 | -8.615850e-47 |
| Msa0197420 | Msa0844560 | 0.802166 | 6.382221e-49 | -8.615850e-47 |
| Msa0197930 | Msa0844560 | 0.813726 | 2.212194e-51 | -8.615850e-47 |
| Msa0200260 | Msa0844560 | 0.816165 | 6.364493e-52 | -8.615850e-47 |
| Msa0203010 | Msa0844560 | 0.800282 | 1.550627e-48 | -8.615850e-47 |
| Msa0203030 | Msa0844560 | 0.857482 | 1.584469e-62 | -8.615850e-47 |
| Msa0218780 | Msa0844560 | 0.811965 | 5.375544e-51 | -8.615850e-47 |
| Msa0219190 | Msa0844560 | 0.856752 | 2.601988e-62 | -8.615850e-47 |
| Msa0221290 | Msa0844560 | 0.813921 | 2.003632e-51 | -8.615850e-47 |
| Msa0369170 | Msa0844560 | 0.811283 | 7.564226e-51 | -8.615850e-47 |
| Msa0378500 | Msa0844560 | 0.808251 | 3.395306e-50 | -8.615850e-47 |
| Msa0392420 | Msa0844560 | 0.865307 | 6.495453e-65 | -8.615850e-47 |
| Msa0392460 | Msa0844560 | 0.863460 | 2.450068e-64 | -8.615850e-47 |
| Msa0392490 | Msa0844560 | 0.861421 | 1.038429e-63 | -8.615850e-47 |
| Msa0406000 | Msa0844560 | 0.838556 | 2.680552e-57 | -8.615850e-47 |
| Msa0407920 | Msa0844560 | 0.811073 | 8.402617e-51 | -8.615850e-47 |
| Msa0408630 | Msa0844560 | 0.810045 | 1.401219e-50 | -8.615850e-47 |
| Msa0413930 | Msa0844560 | 0.801194 | 1.010167e-48 | -8.615850e-47 |
| Msa0416590 | Msa0844560 | 0.800351 | 1.501000e-48 | -8.615850e-47 |
| Msa0419820 | Msa0844560 | 0.837026 | 6.627019e-57 | -8.615850e-47 |
| Msa0424330 | Msa0844560 | 0.801764 | 7.718749e-49 | -8.615850e-47 |
| Msa0436500 | Msa0844560 | 0.821983 | 3.020305e-53 | -8.615850e-47 |
| Msa0451400 | Msa0844560 | 0.859129 | 5.122075e-63 | -8.615850e-47 |
| Msa0461720 | Msa0844560 | 0.823521 | 1.324217e-53 | -8.615850e-47 |
| Msa0480980 | Msa0844560 | 0.800955 | 1.130315e-48 | -8.615850e-47 |
| Msa0238890 | Msa0844560 | 0.801985 | 6.954870e-49 | -8.615850e-47 |
| Msa0239570 | Msa0844560 | 0.801753 | 7.760898e-49 | -8.615850e-47 |
| Msa0243100 | Msa0844560 | 0.824098 | 9.704605e-54 | -8.615850e-47 |
| Msa0252630 | Msa0844560 | 0.801444 | 8.978047e-49 | -8.615850e-47 |
| Msa0252770 | Msa0844560 | 0.804166 | 2.460614e-49 | -8.615850e-47 |
| Msa0277180 | Msa0844560 | 0.809116 | 2.218542e-50 | -8.615850e-47 |
| Msa0289890 | Msa0844560 | 0.809530 | 1.808282e-50 | -8.615850e-47 |
| Msa0297740 | Msa0844560 | 0.818596 | 1.805416e-52 | -8.615850e-47 |
| Msa0298240 | Msa0844560 | 0.842078 | 3.219704e-58 | -8.615850e-47 |
| Msa0305500 | Msa0844560 | 0.804418 | 2.181151e-49 | -8.615850e-47 |
| Msa0306300 | Msa0844560 | 0.815040 | 1.133238e-51 | -8.615850e-47 |
| Msa0308830 | Msa0844560 | 0.822541 | 2.241424e-53 | -8.615850e-47 |
| Msa0316810 | Msa0844560 | 0.815620 | 8.419194e-52 | -8.615850e-47 |
| Msa0317280 | Msa0844560 | 0.808056 | 3.735594e-50 | -8.615850e-47 |
| Msa0323610 | Msa0844560 | 0.843109 | 1.714909e-58 | -8.615850e-47 |
| Msa0329620 | Msa0844560 | 0.812142 | 4.918781e-51 | -8.615850e-47 |
| Msa0331900 | Msa0844560 | 0.804129 | 2.505736e-49 | -8.615850e-47 |
| Msa0344570 | Msa0844560 | 0.850203 | 1.975808e-60 | -8.615850e-47 |
| Msa0351770 | Msa0844560 | 0.807365 | 5.237269e-50 | -8.615850e-47 |
| Msa0359250 | Msa0844560 | 0.852018 | 6.079894e-61 | -8.615850e-47 |
| Msa0487570 | Msa0844560 | 0.868877 | 4.709014e-66 | -8.615850e-47 |
| Msa0487630 | Msa0844560 | 0.864264 | 1.378261e-64 | -8.615850e-47 |
| Msa0490390 | Msa0844560 | 0.812655 | 3.801486e-51 | -8.615850e-47 |
| Msa0492190 | Msa0844560 | 0.826463 | 2.676364e-54 | -8.615850e-47 |
| Msa0503580 | Msa0844560 | 0.814818 | 1.269318e-51 | -8.615850e-47 |
| Msa0515950 | Msa0844560 | 0.814960 | 1.180502e-51 | -8.615850e-47 |
| Msa0534930 | Msa0844560 | 0.832357 | 9.902281e-56 | -8.615850e-47 |
| Msa0535040 | Msa0844560 | 0.861508 | 9.769990e-64 | -8.615850e-47 |
| Msa0537920 | Msa0844560 | 0.841561 | 4.409855e-58 | -8.615850e-47 |
| Msa0571140 | Msa0844560 | 0.804542 | 2.055169e-49 | -8.615850e-47 |
| Msa0574890 | Msa0844560 | 0.816481 | 5.408062e-52 | -8.615850e-47 |
| Msa0581760 | Msa0844560 | 0.808046 | 3.753154e-50 | -8.615850e-47 |
| Msa0587610 | Msa0844560 | 0.800676 | 1.289151e-48 | -8.615850e-47 |
| Msa0591790 | Msa0844560 | 0.826251 | 3.005688e-54 | -8.615850e-47 |
| Msa0594090 | Msa0844560 | 0.852175 | 5.485328e-61 | -8.615850e-47 |
| Msa0843220 | Msa0844560 | 0.803856 | 2.854581e-49 | -8.615850e-47 |
| Msa0844560 | Msa0849280 | 0.805515 | 1.285953e-49 | -8.615850e-47 |
| Msa0844560 | Msa0851020 | 0.810982 | 8.791508e-51 | -8.615850e-47 |
| Msa0844560 | Msa0862100 | 0.801989 | 6.938904e-49 | -8.615850e-47 |
| Msa0844560 | Msa0867350 | 0.855033 | 8.272972e-62 | -8.615850e-47 |
| Msa0844560 | Msa0872310 | 0.806726 | 7.149822e-50 | -8.615850e-47 |
| Msa0844560 | Msa0873190 | 0.824410 | 8.195447e-54 | -8.615850e-47 |
| Msa0844560 | Msa0880140 | 0.857062 | 2.107295e-62 | -8.615850e-47 |
| Msa0844560 | Msa0880440 | 0.805697 | 1.177777e-49 | -8.615850e-47 |
| Msa0844560 | Msa0880780 | 0.811850 | 5.696101e-51 | -8.615850e-47 |
| Msa0844560 | Msa0885060 | 0.806801 | 6.893988e-50 | -8.615850e-47 |
| Msa0844560 | Msa0896970 | 0.855464 | 6.197711e-62 | -8.615850e-47 |
| Msa0844560 | Msa0898730 | 0.847048 | 1.479564e-59 | -8.615850e-47 |
| Msa0844560 | Msa0909120 | 0.805814 | 1.112858e-49 | -8.615850e-47 |
| Msa0844560 | Msa0909140 | 0.802243 | 6.152649e-49 | -8.615850e-47 |
| Msa0844560 | Msa0911990 | 0.802877 | 4.553307e-49 | -8.615850e-47 |
| Msa0844560 | Msa0929870 | 0.805697 | 1.177696e-49 | -8.615850e-47 |
| Msa0844560 | Msa0936340 | 0.846022 | 2.819814e-59 | -8.615850e-47 |
| Msa0844560 | Msa0937550 | 0.808068 | 3.713641e-50 | -8.615850e-47 |
| Msa0844560 | Msa0941730 | 0.810428 | 1.158240e-50 | -8.615850e-47 |
| Msa0844560 | Msa0944760 | 0.802473 | 5.518035e-49 | -8.615850e-47 |
| Msa0844560 | Msa0948290 | 0.826076 | 3.307715e-54 | -8.615850e-47 |
| Msa0844560 | Msa0972670 | 0.805117 | 1.558651e-49 | -8.615850e-47 |
| Msa0844560 | Msa0973250 | 0.804936 | 1.700588e-49 | -8.615850e-47 |
| Msa0844560 | Msa0975580 | 0.814366 | 1.597797e-51 | -8.615850e-47 |
| Msa0844560 | Msa0996960 | 0.830507 | 2.825271e-55 | -8.615850e-47 |
| Msa0844560 | Msa0999300 | 0.804150 | 2.480638e-49 | -8.615850e-47 |
| Msa0844560 | Msa0999360 | 0.807938 | 3.958485e-50 | -8.615850e-47 |
| Msa0844560 | Msa1014270 | 0.805464 | 1.318184e-49 | -8.615850e-47 |
| Msa0844560 | Msa1037890 | 0.820385 | 7.053402e-53 | -8.615850e-47 |
| Msa0844560 | Msa1037900 | 0.842542 | 2.427348e-58 | -8.615850e-47 |
| Msa0844560 | Msa1037910 | 0.812666 | 3.779981e-51 | -8.615850e-47 |
| Msa0844560 | Msa1037920 | 0.822263 | 2.601256e-53 | -8.615850e-47 |
| Msa0844560 | Msa1038050 | 0.807934 | 3.966642e-50 | -8.615850e-47 |
| Msa0844560 | Msa1040830 | 0.800794 | 1.219450e-48 | -8.615850e-47 |
| Msa0844560 | Msa1041530 | 0.827056 | 1.931700e-54 | -8.615850e-47 |
| Msa0844560 | Msa1049010 | 0.811557 | 6.595068e-51 | -8.615850e-47 |
| Msa0844560 | Msa1055260 | 0.817938 | 2.543399e-52 | -8.615850e-47 |
| Msa0844560 | Msa1055280 | 0.819707 | 1.008286e-52 | -8.615850e-47 |
| Msa0844560 | Msa1055300 | 0.846891 | 1.633473e-59 | -8.615850e-47 |
| Msa0844560 | Msa1066490 | 0.808641 | 2.802610e-50 | -8.615850e-47 |
| Msa0844560 | Msa1081570 | 0.828864 | 7.090652e-55 | -8.615850e-47 |
| Msa0844560 | Msa1114250 | 0.826194 | 3.101524e-54 | -8.615850e-47 |
| Msa0844560 | Msa1123880 | 0.824554 | 7.580387e-54 | -8.615850e-47 |
| Msa0844560 | Msa1124680 | -0.801430 | 9.038201e-49 | -8.615850e-47 |
| Msa0844560 | Msa1127140 | 0.835204 | 1.922139e-56 | -8.615850e-47 |
| Msa0844560 | Msa1129960 | 0.825198 | 5.343244e-54 | -8.615850e-47 |
| Msa0844560 | Msa1129980 | 0.815936 | 7.161166e-52 | -8.615850e-47 |
| Msa0844560 | Msa1130010 | 0.835029 | 2.128491e-56 | -8.615850e-47 |
| Msa0844560 | Msa1135390 | 0.805436 | 1.336244e-49 | -8.615850e-47 |
| Msa0844560 | Msa1139810 | 0.815839 | 7.525765e-52 | -8.615850e-47 |
| Msa0844560 | Msa1145020 | 0.811295 | 7.519100e-51 | -8.615850e-47 |
| Msa0844560 | Msa1166400 | 0.833184 | 6.168114e-56 | -8.615850e-47 |
| Msa0844560 | Msa1169710 | 0.847100 | 1.431931e-59 | -8.615850e-47 |
| Msa0844560 | Msa1173710 | 0.810888 | 9.214151e-51 | -8.615850e-47 |
| Msa0844560 | Msa1176160 | 0.821557 | 3.790746e-53 | -8.615850e-47 |
| Msa0844560 | Msa1190400 | 0.819031 | 1.437721e-52 | -8.615850e-47 |
| Msa0844560 | Msa1200440 | 0.810325 | 1.219405e-50 | -8.615850e-47 |
| Msa0844560 | Msa1201160 | 0.827366 | 1.627499e-54 | -8.615850e-47 |
| Msa0844560 | Msa1204880 | 0.811107 | 8.261854e-51 | -8.615850e-47 |
| Msa0844560 | Msa1218550 | 0.810746 | 9.889097e-51 | -8.615850e-47 |
| Msa0844560 | Msa1222970 | 0.810533 | 1.099495e-50 | -8.615850e-47 |
| Msa0844560 | Msa1222990 | 0.814187 | 1.750467e-51 | -8.615850e-47 |
| Msa0844560 | Msa1228190 | 0.832314 | 1.014638e-55 | -8.615850e-47 |
| Msa0844560 | Msa1228610 | 0.803655 | 3.143299e-49 | -8.615850e-47 |
| Msa0844560 | Msa1236100 | 0.816040 | 6.788937e-52 | -8.615850e-47 |
| Msa0844560 | Msa1238470 | 0.804320 | 2.286290e-49 | -8.615850e-47 |
| Msa0844560 | Msa1248040 | 0.801622 | 8.255390e-49 | -8.615850e-47 |
| Msa0844560 | Msa1267220 | 0.802299 | 5.991034e-49 | -8.615850e-47 |
| Msa0844560 | Msa1271260 | 0.816649 | 4.959491e-52 | -8.615850e-47 |
| Msa0844560 | Msa1283860 | 0.819082 | 1.399827e-52 | -8.615850e-47 |
| Msa0844560 | Msa1294290 | 0.805164 | 1.523208e-49 | -8.615850e-47 |
| Msa0844560 | Msa1305510 | 0.847406 | 1.179974e-59 | -8.615850e-47 |
| Msa0844560 | Msa1307190 | 0.805491 | 1.301094e-49 | -8.615850e-47 |
| Msa0844560 | Msa1346370 | 0.804852 | 1.770190e-49 | -8.615850e-47 |
| Msa0844560 | Msa1374550 | 0.874422 | 6.836496e-68 | -8.615850e-47 |
| Msa0844560 | Msa1378760 | 0.801223 | 9.962186e-49 | -8.615850e-47 |
| Msa0844560 | Msa1394890 | 0.802209 | 6.252600e-49 | -8.615850e-47 |
| Msa0844560 | Msa1406780 | 0.806872 | 6.661371e-50 | -8.615850e-47 |
| Msa0844560 | Msa1414930 | 0.812386 | 4.351476e-51 | -8.615850e-47 |
| Msa0844560 | Msa1420060 | 0.867161 | 1.677963e-65 | -8.615850e-47 |
| Msa0844560 | Msa1421550 | 0.857371 | 1.708158e-62 | -8.615850e-47 |
| Msa0844560 | Msa1423460 | 0.806993 | 6.278858e-50 | -8.615850e-47 |
| Msa0844560 | Msa1429250 | 0.822343 | 2.492139e-53 | -8.615850e-47 |
| Msa0844560 | Msa1431850 | 0.814249 | 1.696086e-51 | -8.615850e-47 |
| Msa0844560 | Msa1436570 | 0.812294 | 4.558695e-51 | -8.615850e-47 |
| Msa0844560 | Msa1438250 | 0.801224 | 9.958221e-49 | -8.615850e-47 |
| Msa0844560 | Msa1455320 | 0.807269 | 5.489280e-50 | -8.615850e-47 |
| Msa0844560 | Msa1459380 | 0.801221 | 9.973529e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0844560 | MtrunA17_Chr5g0415411 | 74.569 | 232 | 48 | 2 | 1 | 225 | 1 | 228 | 9.04e-120 | 340 |
| Msa0844560 | MtrunA17_Chr8g0363751 | 54.274 | 234 | 96 | 3 | 1 | 225 | 1 | 232 | 1.09e-82 | 246 |
| Msa0844560 | MtrunA17_Chr8g0391631 | 55.280 | 161 | 61 | 3 | 1 | 152 | 17 | 175 | 3.14e-56 | 176 |
| Msa0844560 | MtrunA17_Chr7g0240681 | 42.060 | 233 | 115 | 5 | 1 | 222 | 1 | 224 | 1.84e-51 | 166 |
| Msa0844560 | MtrunA17_Chr7g0240631 | 39.485 | 233 | 122 | 5 | 1 | 223 | 1 | 224 | 9.78e-51 | 164 |
| Msa0844560 | MtrunA17_Chr7g0240641 | 39.224 | 232 | 124 | 4 | 1 | 223 | 1 | 224 | 8.82e-50 | 162 |
| Msa0844560 | MtrunA17_Chr1g0196721 | 42.222 | 225 | 115 | 4 | 6 | 222 | 3 | 220 | 8.97e-49 | 159 |
| Msa0844560 | MtrunA17_Chr7g0240581 | 38.528 | 231 | 125 | 4 | 1 | 222 | 1 | 223 | 1.51e-48 | 159 |
| Msa0844560 | MtrunA17_Chr7g0240691 | 40.529 | 227 | 119 | 4 | 5 | 223 | 37 | 255 | 8.86e-48 | 157 |
| Msa0844560 | MtrunA17_Chr1g0196661 | 41.518 | 224 | 118 | 5 | 5 | 221 | 3 | 220 | 1.75e-47 | 156 |
| Msa0844560 | MtrunA17_Chr7g0240561 | 39.394 | 231 | 123 | 4 | 1 | 222 | 1 | 223 | 6.95e-47 | 154 |
| Msa0844560 | MtrunA17_Chr3g0132581 | 40.265 | 226 | 128 | 3 | 1 | 223 | 1 | 222 | 8.95e-47 | 154 |
| Msa0844560 | MtrunA17_Chr1g0212301 | 42.254 | 213 | 109 | 4 | 5 | 209 | 3 | 209 | 3.06e-46 | 152 |
| Msa0844560 | MtrunA17_Chr1g0196691 | 38.767 | 227 | 125 | 5 | 5 | 223 | 28 | 248 | 6.12e-46 | 152 |
| Msa0844560 | MtrunA17_Chr1g0196711 | 39.556 | 225 | 121 | 4 | 5 | 221 | 3 | 220 | 1.64e-45 | 151 |
| Msa0844560 | MtrunA17_Chr8g0379561 | 39.269 | 219 | 118 | 4 | 1 | 212 | 2 | 212 | 2.79e-45 | 150 |
| Msa0844560 | MtrunA17_Chr7g0240551 | 38.528 | 231 | 125 | 4 | 1 | 222 | 1 | 223 | 3.88e-45 | 150 |
| Msa0844560 | MtrunA17_Chr7g0240541 | 38.961 | 231 | 124 | 4 | 1 | 222 | 1 | 223 | 9.00e-45 | 149 |
| Msa0844560 | MtrunA17_Chr4g0008791 | 39.912 | 228 | 118 | 6 | 5 | 223 | 7 | 224 | 9.56e-45 | 149 |
| Msa0844560 | MtrunA17_Chr7g0240531 | 38.961 | 231 | 124 | 4 | 1 | 222 | 1 | 223 | 2.92e-44 | 147 |
| Msa0844560 | MtrunA17_Chr7g0240521 | 40.343 | 233 | 119 | 7 | 1 | 222 | 8 | 231 | 3.61e-44 | 147 |
| Msa0844560 | MtrunA17_Chr4g0008781 | 39.462 | 223 | 119 | 4 | 1 | 214 | 1 | 216 | 2.24e-43 | 145 |
| Msa0844560 | MtrunA17_Chr8g0379581 | 38.073 | 218 | 120 | 3 | 1 | 211 | 1 | 210 | 6.06e-43 | 144 |
| Msa0844560 | MtrunA17_Chr7g0240511 | 38.095 | 231 | 121 | 6 | 1 | 222 | 1 | 218 | 6.76e-43 | 144 |
| Msa0844560 | MtrunA17_Chr7g0240671 | 37.850 | 214 | 113 | 5 | 1 | 207 | 1 | 201 | 6.67e-42 | 141 |
| Msa0844560 | MtrunA17_Chr6g0483141 | 37.118 | 229 | 126 | 5 | 4 | 222 | 2 | 222 | 3.43e-41 | 140 |
| Msa0844560 | MtrunA17_Chr7g0240611 | 34.061 | 229 | 132 | 4 | 2 | 223 | 4 | 220 | 1.06e-40 | 138 |
| Msa0844560 | MtrunA17_Chr4g0029341 | 37.387 | 222 | 128 | 4 | 3 | 218 | 2 | 218 | 1.21e-40 | 138 |
| Msa0844560 | MtrunA17_Chr2g0312771 | 39.726 | 219 | 110 | 6 | 3 | 211 | 2 | 208 | 2.33e-40 | 137 |
| Msa0844560 | MtrunA17_Chr2g0312781 | 41.346 | 208 | 106 | 5 | 8 | 208 | 24 | 222 | 3.94e-40 | 137 |
| Msa0844560 | MtrunA17_Chr3g0107731 | 40.566 | 212 | 110 | 5 | 14 | 218 | 18 | 220 | 6.26e-40 | 136 |
| Msa0844560 | MtrunA17_Chr5g0417011 | 35.586 | 222 | 132 | 5 | 3 | 216 | 5 | 223 | 3.06e-39 | 135 |
| Msa0844560 | MtrunA17_Chr2g0312681 | 37.963 | 216 | 118 | 5 | 3 | 211 | 2 | 208 | 5.12e-39 | 134 |
| Msa0844560 | MtrunA17_Chr3g0107741 | 38.596 | 228 | 118 | 6 | 1 | 218 | 5 | 220 | 1.30e-38 | 133 |
| Msa0844560 | MtrunA17_Chr2g0312751 | 38.813 | 219 | 112 | 6 | 3 | 211 | 2 | 208 | 1.59e-38 | 133 |
| Msa0844560 | MtrunA17_Chr2g0312791 | 36.000 | 225 | 128 | 5 | 3 | 219 | 2 | 218 | 9.97e-38 | 130 |
| Msa0844560 | MtrunA17_Chr7g0240651 | 35.398 | 226 | 127 | 4 | 5 | 223 | 7 | 220 | 1.92e-37 | 130 |
| Msa0844560 | MtrunA17_Chr2g0312711 | 37.037 | 216 | 119 | 5 | 4 | 212 | 3 | 208 | 2.64e-37 | 129 |
| Msa0844560 | MtrunA17_Chr7g0240661 | 37.037 | 216 | 117 | 4 | 5 | 213 | 7 | 210 | 6.84e-37 | 129 |
| Msa0844560 | MtrunA17_Chr1g0196771 | 37.555 | 229 | 123 | 5 | 5 | 223 | 3 | 221 | 4.23e-36 | 127 |
| Msa0844560 | MtrunA17_Chr2g0312691 | 37.788 | 217 | 119 | 6 | 3 | 212 | 2 | 209 | 8.50e-36 | 125 |
| Msa0844560 | MtrunA17_Chr2g0312731 | 40.488 | 205 | 100 | 7 | 14 | 208 | 13 | 205 | 1.20e-35 | 125 |
| Msa0844560 | MtrunA17_Chr2g0312811 | 41.063 | 207 | 104 | 7 | 14 | 211 | 13 | 210 | 1.33e-35 | 125 |
| Msa0844560 | MtrunA17_Chr2g0312721 | 40.000 | 205 | 107 | 7 | 14 | 211 | 13 | 208 | 3.05e-34 | 122 |
| Msa0844560 | MtrunA17_Chr8g0357211 | 37.220 | 223 | 126 | 6 | 3 | 219 | 2 | 216 | 4.78e-34 | 121 |
| Msa0844560 | MtrunA17_Chr5g0433801 | 35.714 | 210 | 117 | 6 | 14 | 215 | 15 | 214 | 6.72e-34 | 121 |
| Msa0844560 | MtrunA17_Chr8g0357241 | 35.874 | 223 | 129 | 6 | 3 | 219 | 2 | 216 | 6.51e-33 | 118 |
| Msa0844560 | MtrunA17_Chr5g0415421 | 76.712 | 73 | 17 | 0 | 29 | 101 | 11 | 83 | 1.39e-31 | 112 |
| Msa0844560 | MtrunA17_Chr4g0069471 | 40.884 | 181 | 101 | 5 | 4 | 181 | 24 | 201 | 2.65e-29 | 108 |
| Msa0844560 | MtrunA17_Chr2g0313561 | 62.264 | 53 | 18 | 1 | 49 | 101 | 2 | 52 | 9.48e-17 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0844560 | AT1G10360.1 | 54.091 | 220 | 93 | 2 | 1 | 213 | 1 | 219 | 4.79e-77 | 231 |
| Msa0844560 | AT1G10370.1 | 54.545 | 220 | 92 | 2 | 1 | 213 | 1 | 219 | 4.44e-76 | 229 |
| Msa0844560 | AT1G59700.1 | 46.288 | 229 | 114 | 3 | 5 | 225 | 6 | 233 | 2.03e-66 | 205 |
| Msa0844560 | AT1G59670.1 | 46.847 | 222 | 109 | 3 | 5 | 218 | 6 | 226 | 8.86e-65 | 201 |
| Msa0844560 | AT1G69930.1 | 47.442 | 215 | 104 | 3 | 6 | 213 | 13 | 225 | 6.78e-59 | 186 |
| Msa0844560 | AT1G27130.1 | 44.843 | 223 | 111 | 4 | 1 | 213 | 1 | 221 | 3.75e-57 | 181 |
| Msa0844560 | AT1G27140.1 | 41.667 | 228 | 120 | 4 | 1 | 217 | 1 | 226 | 6.40e-54 | 173 |
| Msa0844560 | AT1G69920.1 | 40.724 | 221 | 120 | 3 | 2 | 213 | 31 | 249 | 2.02e-50 | 165 |
| Msa0844560 | AT3G09270.1 | 38.028 | 213 | 127 | 3 | 6 | 215 | 7 | 217 | 1.05e-40 | 139 |
| Msa0844560 | AT2G29420.1 | 34.529 | 223 | 133 | 3 | 3 | 219 | 7 | 222 | 4.22e-39 | 135 |
| Msa0844560 | AT2G29490.1 | 38.208 | 212 | 117 | 4 | 6 | 210 | 8 | 212 | 5.98e-38 | 132 |
| Msa0844560 | AT2G29470.1 | 38.222 | 225 | 122 | 7 | 6 | 221 | 8 | 224 | 2.16e-37 | 130 |
| Msa0844560 | AT1G78340.1 | 38.278 | 209 | 107 | 5 | 14 | 212 | 13 | 209 | 1.02e-36 | 128 |
| Msa0844560 | AT2G29480.1 | 36.364 | 220 | 126 | 4 | 6 | 218 | 8 | 220 | 1.43e-36 | 128 |
| Msa0844560 | AT2G29460.1 | 37.054 | 224 | 125 | 6 | 4 | 219 | 6 | 221 | 2.07e-36 | 128 |
| Msa0844560 | AT2G29450.1 | 35.398 | 226 | 131 | 4 | 5 | 222 | 6 | 224 | 2.14e-36 | 128 |
| Msa0844560 | AT1G17170.1 | 37.500 | 216 | 118 | 5 | 3 | 211 | 2 | 207 | 4.01e-35 | 124 |
| Msa0844560 | AT1G78320.1 | 38.614 | 202 | 110 | 5 | 14 | 209 | 13 | 206 | 6.21e-35 | 124 |
| Msa0844560 | AT1G78380.1 | 35.556 | 225 | 129 | 5 | 3 | 220 | 2 | 217 | 6.81e-35 | 124 |
| Msa0844560 | AT1G17180.1 | 36.620 | 213 | 119 | 6 | 14 | 219 | 13 | 216 | 1.04e-34 | 123 |
| Msa0844560 | AT1G78370.1 | 33.659 | 205 | 122 | 4 | 14 | 212 | 13 | 209 | 1.05e-34 | 123 |
| Msa0844560 | AT3G43800.1 | 36.530 | 219 | 123 | 6 | 1 | 210 | 1 | 212 | 2.34e-34 | 122 |
| Msa0844560 | AT2G29440.1 | 34.956 | 226 | 131 | 6 | 5 | 222 | 6 | 223 | 9.15e-34 | 121 |
| Msa0844560 | AT1G53680.1 | 35.407 | 209 | 111 | 5 | 14 | 210 | 16 | 212 | 2.98e-33 | 119 |
| Msa0844560 | AT5G62480.1 | 33.624 | 229 | 130 | 5 | 4 | 217 | 7 | 228 | 5.03e-33 | 119 |
| Msa0844560 | AT1G17190.1 | 35.747 | 221 | 120 | 6 | 1 | 211 | 1 | 209 | 3.70e-32 | 117 |
| Msa0844560 | AT1G78360.1 | 37.559 | 213 | 116 | 6 | 8 | 212 | 7 | 210 | 1.29e-31 | 115 |
| Msa0844560 | AT1G74590.1 | 29.412 | 221 | 148 | 3 | 8 | 222 | 10 | 228 | 8.78e-30 | 111 |
| Msa0844560 | AT1G78320.2 | 30.693 | 202 | 99 | 5 | 14 | 209 | 13 | 179 | 3.88e-19 | 82.0 |
| Msa0844560 | AT5G62480.3 | 27.074 | 229 | 118 | 5 | 4 | 217 | 7 | 201 | 1.04e-17 | 79.0 |
| Msa0844560 | AT5G62480.2 | 26.638 | 229 | 120 | 5 | 4 | 217 | 7 | 202 | 2.28e-17 | 77.8 |
Find 37 sgRNAs with CRISPR-Local
Find 124 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCGAGCCATTGCGAAATTT+TGG | 0.144442 | 5_4:+23087070 | Msa0844560:CDS |
| TCCACAAGTTTATCAGTTTC+TGG | 0.176738 | 5_4:-23087730 | None:intergenic |
| CTGAAGAAGCAAGTCACTTT+TGG | 0.216096 | 5_4:-23086908 | None:intergenic |
| CTTCTTTGACTCTTCATCTT+TGG | 0.228379 | 5_4:-23087458 | None:intergenic |
| TTGAATATATTGATGAAGTT+TGG | 0.240973 | 5_4:+23087004 | Msa0844560:CDS |
| TACAAATGACTTGAAGCTTT+TGG | 0.262387 | 5_4:+23086795 | Msa0844560:CDS |
| AAAATTCCAGTTCTCATTCA+TGG | 0.281479 | 5_4:+23086949 | Msa0844560:CDS |
| AATCCAATCCTTTGATGTTA+AGG | 0.308526 | 5_4:-23086858 | None:intergenic |
| AGACTCCAGCTTTGGTGAAA+TGG | 0.311703 | 5_4:+23087665 | Msa0844560:CDS |
| GACTCCAGCTTTGGTGAAAT+GGG | 0.333466 | 5_4:+23087666 | Msa0844560:CDS |
| GGAAGAAGTTCTTGAGAAGT+TGG | 0.342710 | 5_4:+23087498 | Msa0844560:CDS |
| ATCCAATCCTTTGATGTTAA+GGG | 0.362609 | 5_4:-23086857 | None:intergenic |
| TGCCCTTAACATCAAAGGAT+TGG | 0.392813 | 5_4:+23086855 | Msa0844560:CDS |
| GACCCTCAACCAACTCAAAT+AGG | 0.392914 | 5_4:-23087602 | None:intergenic |
| GAAACATTTCCCAATTACTT+TGG | 0.406351 | 5_4:-23087793 | None:intergenic |
| GGTCCTATTTGAGTTGGTTG+AGG | 0.441711 | 5_4:+23087599 | Msa0844560:CDS |
| GTCCTATTTGAGTTGGTTGA+GGG | 0.442650 | 5_4:+23087600 | Msa0844560:CDS |
| TTATCTCCATGAATGAGAAC+TGG | 0.442961 | 5_4:-23086955 | None:intergenic |
| TCAGCCCATTTCACCAAAGC+TGG | 0.450590 | 5_4:-23087670 | None:intergenic |
| GCATTTGAAGGAAGAATTGA+GGG | 0.456921 | 5_4:-23087042 | None:intergenic |
| TGGTATAATTCCTCGCGAAA+TGG | 0.461119 | 5_4:+23087427 | Msa0844560:CDS |
| TAGCAAGTATAGTGAAGAAA+AGG | 0.473052 | 5_4:+23087531 | Msa0844560:CDS |
| TGAAACAAAGACTCCAGCTT+TGG | 0.477233 | 5_4:+23087657 | Msa0844560:CDS |
| GGTAGAATTCCTTTCACAGC+AGG | 0.479065 | 5_4:-23087709 | None:intergenic |
| TAAACTTGTGGAGTTTGCTA+AGG | 0.485321 | 5_4:+23087741 | Msa0844560:CDS |
| TATGATTGCAGATTCACAAA+TGG | 0.490176 | 5_4:-23086980 | None:intergenic |
| AGCATTTGAAGGAAGAATTG+AGG | 0.502372 | 5_4:-23087043 | None:intergenic |
| AAAATTGCCCTTAACATCAA+AGG | 0.511770 | 5_4:+23086850 | Msa0844560:CDS |
| GCTGCTCATCCTGCTGTGAA+AGG | 0.525289 | 5_4:+23087700 | Msa0844560:CDS |
| GCTCGATCATAAGCATTTGA+AGG | 0.528885 | 5_4:-23087054 | None:intergenic |
| AAACTTGTGGAGTTTGCTAA+GGG | 0.551366 | 5_4:+23087742 | Msa0844560:CDS |
| ACCAGAAACTGATAAACTTG+TGG | 0.558982 | 5_4:+23087729 | Msa0844560:CDS |
| AGGGTCACTGAGAAAATGAC+AGG | 0.565602 | 5_4:+23087619 | Msa0844560:CDS |
| CAAAGATGAAGAGTCAAAGA+AGG | 0.584288 | 5_4:+23087459 | Msa0844560:CDS |
| CTTAATACAAATGGACTGAA+CGG | 0.585122 | 5_4:-23086823 | None:intergenic |
| GGCAATCAAACCATTTCGCG+AGG | 0.614236 | 5_4:-23087437 | None:intergenic |
| GGCAACCCAAAATTTCGCAA+TGG | 0.635242 | 5_4:-23087076 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAGACAAAAATTTATAA+AGG | - | chr5_4:23087150-23087169 | None:intergenic | 10.0% |
| !! | AAAAAGACAAAAATTTATAA+AGG | - | chr5_4:23087150-23087169 | None:intergenic | 10.0% |
| !!! | ATTTTTACTCTTAATACAAA+TGG | - | chr5_4:23086835-23086854 | None:intergenic | 15.0% |
| !! | ACAAACACTAAATATTTATA+CGG | - | chr5_4:23087273-23087292 | None:intergenic | 15.0% |
| !!! | ATTTTTACTCTTAATACAAA+TGG | - | chr5_4:23086835-23086854 | None:intergenic | 15.0% |
| !! | ACAAACACTAAATATTTATA+CGG | - | chr5_4:23087273-23087292 | None:intergenic | 15.0% |
| !! | TTGAATATATTGATGAAGTT+TGG | + | chr5_4:23087004-23087023 | Msa0844560:CDS | 20.0% |
| !!! | ATATTGTTTGTCATTGTTTT+TGG | + | chr5_4:23087386-23087405 | Msa0844560:intron | 20.0% |
| !!! | GATTTATTGATTTTGCTTTT+GGG | + | chr5_4:23087578-23087597 | Msa0844560:CDS | 20.0% |
| !! | TTGAATATATTGATGAAGTT+TGG | + | chr5_4:23087004-23087023 | Msa0844560:CDS | 20.0% |
| !!! | ATATTGTTTGTCATTGTTTT+TGG | + | chr5_4:23087386-23087405 | Msa0844560:intron | 20.0% |
| !!! | GATTTATTGATTTTGCTTTT+GGG | + | chr5_4:23087578-23087597 | Msa0844560:CDS | 20.0% |
| ! | GATGAAGTTTGGAAAAATAA+TGG | + | chr5_4:23087015-23087034 | Msa0844560:CDS | 25.0% |
| !!! | TCATTGTTTTTGGTTTCAAT+TGG | + | chr5_4:23087396-23087415 | Msa0844560:intron | 25.0% |
| !!! | CATTGTTTTTGGTTTCAATT+GGG | + | chr5_4:23087397-23087416 | Msa0844560:intron | 25.0% |
| !!! | GGATTTATTGATTTTGCTTT+TGG | + | chr5_4:23087577-23087596 | Msa0844560:CDS | 25.0% |
| ! | GATGAAGTTTGGAAAAATAA+TGG | + | chr5_4:23087015-23087034 | Msa0844560:CDS | 25.0% |
| !!! | TCATTGTTTTTGGTTTCAAT+TGG | + | chr5_4:23087396-23087415 | Msa0844560:intron | 25.0% |
| !!! | CATTGTTTTTGGTTTCAATT+GGG | + | chr5_4:23087397-23087416 | Msa0844560:intron | 25.0% |
| !!! | GGATTTATTGATTTTGCTTT+TGG | + | chr5_4:23087577-23087596 | Msa0844560:CDS | 25.0% |
| ! | TACAAATGACTTGAAGCTTT+TGG | + | chr5_4:23086795-23086814 | Msa0844560:CDS | 30.0% |
| ! | ACAAATGACTTGAAGCTTTT+GGG | + | chr5_4:23086796-23086815 | Msa0844560:CDS | 30.0% |
| !! | CTTAATACAAATGGACTGAA+CGG | - | chr5_4:23086826-23086845 | None:intergenic | 30.0% |
| AAAATTGCCCTTAACATCAA+AGG | + | chr5_4:23086850-23086869 | Msa0844560:CDS | 30.0% | |
| ATCCAATCCTTTGATGTTAA+GGG | - | chr5_4:23086860-23086879 | None:intergenic | 30.0% | |
| AATCCAATCCTTTGATGTTA+AGG | - | chr5_4:23086861-23086880 | None:intergenic | 30.0% | |
| !!! | ACTGGAATTTTTTTGTACAC+AGG | - | chr5_4:23086940-23086959 | None:intergenic | 30.0% |
| AAAATTCCAGTTCTCATTCA+TGG | + | chr5_4:23086949-23086968 | Msa0844560:CDS | 30.0% | |
| TATGATTGCAGATTCACAAA+TGG | - | chr5_4:23086983-23087002 | None:intergenic | 30.0% | |
| ! | AAATAACTTGTCATCGATGT+AGG | - | chr5_4:23087100-23087119 | None:intergenic | 30.0% |
| GACAAACAATATGATTCAGT+AGG | - | chr5_4:23087378-23087397 | None:intergenic | 30.0% | |
| TAGCAAGTATAGTGAAGAAA+AGG | + | chr5_4:23087531-23087550 | Msa0844560:CDS | 30.0% | |
| !!! | AGTGAAGAAAAGGTCTTTTT+TGG | + | chr5_4:23087541-23087560 | Msa0844560:CDS | 30.0% |
| !!! | TTTTTTGGAGGAGAGAAAAT+TGG | + | chr5_4:23087556-23087575 | Msa0844560:CDS | 30.0% |
| TGAGAAAATGACAGGAAAAA+AGG | + | chr5_4:23087627-23087646 | Msa0844560:CDS | 30.0% | |
| ! | TACAAATGACTTGAAGCTTT+TGG | + | chr5_4:23086795-23086814 | Msa0844560:CDS | 30.0% |
| ! | ACAAATGACTTGAAGCTTTT+GGG | + | chr5_4:23086796-23086815 | Msa0844560:CDS | 30.0% |
| !! | CTTAATACAAATGGACTGAA+CGG | - | chr5_4:23086826-23086845 | None:intergenic | 30.0% |
| AAAATTGCCCTTAACATCAA+AGG | + | chr5_4:23086850-23086869 | Msa0844560:CDS | 30.0% | |
| ATCCAATCCTTTGATGTTAA+GGG | - | chr5_4:23086860-23086879 | None:intergenic | 30.0% | |
| AATCCAATCCTTTGATGTTA+AGG | - | chr5_4:23086861-23086880 | None:intergenic | 30.0% | |
| !!! | ACTGGAATTTTTTTGTACAC+AGG | - | chr5_4:23086940-23086959 | None:intergenic | 30.0% |
| AAAATTCCAGTTCTCATTCA+TGG | + | chr5_4:23086949-23086968 | Msa0844560:CDS | 30.0% | |
| TATGATTGCAGATTCACAAA+TGG | - | chr5_4:23086983-23087002 | None:intergenic | 30.0% | |
| ! | AAATAACTTGTCATCGATGT+AGG | - | chr5_4:23087100-23087119 | None:intergenic | 30.0% |
| GACAAACAATATGATTCAGT+AGG | - | chr5_4:23087378-23087397 | None:intergenic | 30.0% | |
| TAGCAAGTATAGTGAAGAAA+AGG | + | chr5_4:23087531-23087550 | Msa0844560:CDS | 30.0% | |
| !!! | AGTGAAGAAAAGGTCTTTTT+TGG | + | chr5_4:23087541-23087560 | Msa0844560:CDS | 30.0% |
| !!! | TTTTTTGGAGGAGAGAAAAT+TGG | + | chr5_4:23087556-23087575 | Msa0844560:CDS | 30.0% |
| TGAGAAAATGACAGGAAAAA+AGG | + | chr5_4:23087627-23087646 | Msa0844560:CDS | 30.0% | |
| !!! | TGAAGAAGCAAGTCACTTTT+GGG | - | chr5_4:23086910-23086929 | None:intergenic | 35.0% |
| TTATCTCCATGAATGAGAAC+TGG | - | chr5_4:23086958-23086977 | None:intergenic | 35.0% | |
| GCATTTGAAGGAAGAATTGA+GGG | - | chr5_4:23087045-23087064 | None:intergenic | 35.0% | |
| AGCATTTGAAGGAAGAATTG+AGG | - | chr5_4:23087046-23087065 | None:intergenic | 35.0% | |
| CTTCTTTGACTCTTCATCTT+TGG | - | chr5_4:23087461-23087480 | None:intergenic | 35.0% | |
| CAAAGATGAAGAGTCAAAGA+AGG | + | chr5_4:23087459-23087478 | Msa0844560:CDS | 35.0% | |
| !! | GAAGGCATATTTTGAGCAAA+TGG | + | chr5_4:23087477-23087496 | Msa0844560:CDS | 35.0% |
| !!! | GAAGAAAAGGTCTTTTTTGG+AGG | + | chr5_4:23087544-23087563 | Msa0844560:CDS | 35.0% |
| ACCAGAAACTGATAAACTTG+TGG | + | chr5_4:23087729-23087748 | Msa0844560:CDS | 35.0% | |
| TCCACAAGTTTATCAGTTTC+TGG | - | chr5_4:23087733-23087752 | None:intergenic | 35.0% | |
| !! | TAAACTTGTGGAGTTTGCTA+AGG | + | chr5_4:23087741-23087760 | Msa0844560:CDS | 35.0% |
| !! | AAACTTGTGGAGTTTGCTAA+GGG | + | chr5_4:23087742-23087761 | Msa0844560:CDS | 35.0% |
| !! | TAAGGGTTTTGTGCAAAGAA+TGG | + | chr5_4:23087759-23087778 | Msa0844560:CDS | 35.0% |
| !!! | TGAAGAAGCAAGTCACTTTT+GGG | - | chr5_4:23086910-23086929 | None:intergenic | 35.0% |
| TTATCTCCATGAATGAGAAC+TGG | - | chr5_4:23086958-23086977 | None:intergenic | 35.0% | |
| GCATTTGAAGGAAGAATTGA+GGG | - | chr5_4:23087045-23087064 | None:intergenic | 35.0% | |
| AGCATTTGAAGGAAGAATTG+AGG | - | chr5_4:23087046-23087065 | None:intergenic | 35.0% | |
| CTTCTTTGACTCTTCATCTT+TGG | - | chr5_4:23087461-23087480 | None:intergenic | 35.0% | |
| CAAAGATGAAGAGTCAAAGA+AGG | + | chr5_4:23087459-23087478 | Msa0844560:CDS | 35.0% | |
| !! | GAAGGCATATTTTGAGCAAA+TGG | + | chr5_4:23087477-23087496 | Msa0844560:CDS | 35.0% |
| !!! | GAAGAAAAGGTCTTTTTTGG+AGG | + | chr5_4:23087544-23087563 | Msa0844560:CDS | 35.0% |
| ACCAGAAACTGATAAACTTG+TGG | + | chr5_4:23087729-23087748 | Msa0844560:CDS | 35.0% | |
| TCCACAAGTTTATCAGTTTC+TGG | - | chr5_4:23087733-23087752 | None:intergenic | 35.0% | |
| !! | TAAACTTGTGGAGTTTGCTA+AGG | + | chr5_4:23087741-23087760 | Msa0844560:CDS | 35.0% |
| !! | AAACTTGTGGAGTTTGCTAA+GGG | + | chr5_4:23087742-23087761 | Msa0844560:CDS | 35.0% |
| !! | TAAGGGTTTTGTGCAAAGAA+TGG | + | chr5_4:23087759-23087778 | Msa0844560:CDS | 35.0% |
| TGCCCTTAACATCAAAGGAT+TGG | + | chr5_4:23086855-23086874 | Msa0844560:CDS | 40.0% | |
| !!! | CAAGTCACTTTTGGGATTCA+TGG | - | chr5_4:23086902-23086921 | None:intergenic | 40.0% |
| !! | CTGAAGAAGCAAGTCACTTT+TGG | - | chr5_4:23086911-23086930 | None:intergenic | 40.0% |
| GCTCGATCATAAGCATTTGA+AGG | - | chr5_4:23087057-23087076 | None:intergenic | 40.0% | |
| ! | ATCGAGCCATTGCGAAATTT+TGG | + | chr5_4:23087070-23087089 | Msa0844560:CDS | 40.0% |
| ! | TCGAGCCATTGCGAAATTTT+GGG | + | chr5_4:23087071-23087090 | Msa0844560:CDS | 40.0% |
| CACACACTGTTTAGGTCATT+TGG | - | chr5_4:23087219-23087238 | None:intergenic | 40.0% | |
| TGGTATAATTCCTCGCGAAA+TGG | + | chr5_4:23087427-23087446 | Msa0844560:CDS | 40.0% | |
| GGAAGAAGTTCTTGAGAAGT+TGG | + | chr5_4:23087498-23087517 | Msa0844560:CDS | 40.0% | |
| !! | CTTTTGGGTCCTATTTGAGT+TGG | + | chr5_4:23087593-23087612 | Msa0844560:CDS | 40.0% |
| !! | GTCCTATTTGAGTTGGTTGA+GGG | + | chr5_4:23087600-23087619 | Msa0844560:CDS | 40.0% |
| TGAAACAAAGACTCCAGCTT+TGG | + | chr5_4:23087657-23087676 | Msa0844560:CDS | 40.0% | |
| TGCCCTTAACATCAAAGGAT+TGG | + | chr5_4:23086855-23086874 | Msa0844560:CDS | 40.0% | |
| !!! | CAAGTCACTTTTGGGATTCA+TGG | - | chr5_4:23086902-23086921 | None:intergenic | 40.0% |
| !! | CTGAAGAAGCAAGTCACTTT+TGG | - | chr5_4:23086911-23086930 | None:intergenic | 40.0% |
| GCTCGATCATAAGCATTTGA+AGG | - | chr5_4:23087057-23087076 | None:intergenic | 40.0% | |
| ! | ATCGAGCCATTGCGAAATTT+TGG | + | chr5_4:23087070-23087089 | Msa0844560:CDS | 40.0% |
| ! | TCGAGCCATTGCGAAATTTT+GGG | + | chr5_4:23087071-23087090 | Msa0844560:CDS | 40.0% |
| CACACACTGTTTAGGTCATT+TGG | - | chr5_4:23087219-23087238 | None:intergenic | 40.0% | |
| TGGTATAATTCCTCGCGAAA+TGG | + | chr5_4:23087427-23087446 | Msa0844560:CDS | 40.0% | |
| GGAAGAAGTTCTTGAGAAGT+TGG | + | chr5_4:23087498-23087517 | Msa0844560:CDS | 40.0% | |
| !! | CTTTTGGGTCCTATTTGAGT+TGG | + | chr5_4:23087593-23087612 | Msa0844560:CDS | 40.0% |
| !! | GTCCTATTTGAGTTGGTTGA+GGG | + | chr5_4:23087600-23087619 | Msa0844560:CDS | 40.0% |
| TGAAACAAAGACTCCAGCTT+TGG | + | chr5_4:23087657-23087676 | Msa0844560:CDS | 40.0% | |
| GGCAACCCAAAATTTCGCAA+TGG | - | chr5_4:23087079-23087098 | None:intergenic | 45.0% | |
| GGTTTCAATTGGGAGAGTAG+TGG | + | chr5_4:23087407-23087426 | Msa0844560:intron | 45.0% | |
| !! | GGTCCTATTTGAGTTGGTTG+AGG | + | chr5_4:23087599-23087618 | Msa0844560:CDS | 45.0% |
| GACCCTCAACCAACTCAAAT+AGG | - | chr5_4:23087605-23087624 | None:intergenic | 45.0% | |
| AGGGTCACTGAGAAAATGAC+AGG | + | chr5_4:23087619-23087638 | Msa0844560:CDS | 45.0% | |
| ! | AGACTCCAGCTTTGGTGAAA+TGG | + | chr5_4:23087665-23087684 | Msa0844560:CDS | 45.0% |
| ! | GACTCCAGCTTTGGTGAAAT+GGG | + | chr5_4:23087666-23087685 | Msa0844560:CDS | 45.0% |
| GGTAGAATTCCTTTCACAGC+AGG | - | chr5_4:23087712-23087731 | None:intergenic | 45.0% | |
| GGCAACCCAAAATTTCGCAA+TGG | - | chr5_4:23087079-23087098 | None:intergenic | 45.0% | |
| GGTTTCAATTGGGAGAGTAG+TGG | + | chr5_4:23087407-23087426 | Msa0844560:intron | 45.0% | |
| !! | GGTCCTATTTGAGTTGGTTG+AGG | + | chr5_4:23087599-23087618 | Msa0844560:CDS | 45.0% |
| GACCCTCAACCAACTCAAAT+AGG | - | chr5_4:23087605-23087624 | None:intergenic | 45.0% | |
| AGGGTCACTGAGAAAATGAC+AGG | + | chr5_4:23087619-23087638 | Msa0844560:CDS | 45.0% | |
| ! | AGACTCCAGCTTTGGTGAAA+TGG | + | chr5_4:23087665-23087684 | Msa0844560:CDS | 45.0% |
| ! | GACTCCAGCTTTGGTGAAAT+GGG | + | chr5_4:23087666-23087685 | Msa0844560:CDS | 45.0% |
| GGTAGAATTCCTTTCACAGC+AGG | - | chr5_4:23087712-23087731 | None:intergenic | 45.0% | |
| CACACGCACACACACTGTTT+AGG | - | chr5_4:23087227-23087246 | None:intergenic | 50.0% | |
| GGCAATCAAACCATTTCGCG+AGG | - | chr5_4:23087440-23087459 | None:intergenic | 50.0% | |
| TCAGCCCATTTCACCAAAGC+TGG | - | chr5_4:23087673-23087692 | None:intergenic | 50.0% | |
| CACACGCACACACACTGTTT+AGG | - | chr5_4:23087227-23087246 | None:intergenic | 50.0% | |
| GGCAATCAAACCATTTCGCG+AGG | - | chr5_4:23087440-23087459 | None:intergenic | 50.0% | |
| TCAGCCCATTTCACCAAAGC+TGG | - | chr5_4:23087673-23087692 | None:intergenic | 50.0% | |
| GCTGCTCATCCTGCTGTGAA+AGG | + | chr5_4:23087700-23087719 | Msa0844560:CDS | 55.0% | |
| GCTGCTCATCCTGCTGTGAA+AGG | + | chr5_4:23087700-23087719 | Msa0844560:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 23086790 | 23087801 | 23086790 | ID=Msa0844560;Name=Msa0844560 |
| chr5_4 | mRNA | 23086790 | 23087801 | 23086790 | ID=Msa0844560-mRNA-1;Parent=Msa0844560;Name=Msa0844560-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0|0|1|1|1|2|0|225 |
| chr5_4 | exon | 23086790 | 23087092 | 23086790 | ID=Msa0844560-mRNA-1:exon:9422;Parent=Msa0844560-mRNA-1 |
| chr5_4 | exon | 23087427 | 23087801 | 23087427 | ID=Msa0844560-mRNA-1:exon:9423;Parent=Msa0844560-mRNA-1 |
| chr5_4 | CDS | 23086790 | 23087092 | 23086790 | ID=Msa0844560-mRNA-1:cds;Parent=Msa0844560-mRNA-1 |
| chr5_4 | CDS | 23087427 | 23087801 | 23087427 | ID=Msa0844560-mRNA-1:cds;Parent=Msa0844560-mRNA-1 |
| Gene Sequence |
| Protein sequence |
