Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0165330 | XP_013468467.1 | 97.531 | 1215 | 30 | 0 | 1 | 1215 | 1 | 1215 | 0.0 | 2453 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0165330 | sp|Q9ZV43|CHR8_ARATH | 64.039 | 1218 | 402 | 12 | 1 | 1214 | 1 | 1186 | 0.0 | 1509 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0165330 | A0A072VKG4 | 97.531 | 1215 | 30 | 0 | 1 | 1215 | 1 | 1215 | 0.0 | 2453 |
Gene ID | Type | Classification |
---|---|---|
Msa0165330 | TR | SNF2 |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0014130 | Msa0165330 | 0.820428 | 6.896761e-53 | -8.615850e-47 |
Msa0027420 | Msa0165330 | 0.977371 | 1.198413e-143 | -8.615850e-47 |
Msa0108870 | Msa0165330 | 0.804453 | 2.144732e-49 | -8.615850e-47 |
Msa0127040 | Msa0165330 | 0.802380 | 5.766944e-49 | -8.615850e-47 |
Msa0131450 | Msa0165330 | 0.827744 | 1.320944e-54 | -8.615850e-47 |
Msa0165330 | Msa0208810 | 0.801876 | 7.320942e-49 | -8.615850e-47 |
Msa0165330 | Msa0267870 | 0.802687 | 4.984133e-49 | -8.615850e-47 |
Msa0165330 | Msa0322590 | 0.815736 | 7.932938e-52 | -8.615850e-47 |
Msa0165330 | Msa0394690 | 0.802124 | 6.509848e-49 | -8.615850e-47 |
Msa0165330 | Msa0534080 | 0.808866 | 2.508852e-50 | -8.615850e-47 |
Msa0165330 | Msa0578090 | 0.807452 | 5.019093e-50 | -8.615850e-47 |
Msa0165330 | Msa0659990 | 0.824044 | 9.990463e-54 | -8.615850e-47 |
Msa0165330 | Msa0687230 | 0.812088 | 5.055443e-51 | -8.615850e-47 |
Msa0165330 | Msa0706390 | 0.805677 | 1.189251e-49 | -8.615850e-47 |
Msa0165330 | Msa0742510 | 0.812389 | 4.344888e-51 | -8.615850e-47 |
Msa0165330 | Msa0795660 | 0.812397 | 4.328003e-51 | -8.615850e-47 |
Msa0165330 | Msa0814250 | 0.824145 | 9.458956e-54 | -8.615850e-47 |
Msa0165330 | Msa0869010 | 0.813105 | 3.029246e-51 | -8.615850e-47 |
Msa0165330 | Msa0980940 | 0.803476 | 3.423989e-49 | -8.615850e-47 |
Msa0165330 | Msa1036740 | 0.803362 | 3.614271e-49 | -8.615850e-47 |
Msa0165330 | Msa1070390 | 0.818899 | 1.540615e-52 | -8.615850e-47 |
Msa0165330 | Msa1113590 | 0.807190 | 5.705825e-50 | -8.615850e-47 |
Msa0165330 | Msa1199290 | 0.804480 | 2.117079e-49 | -8.615850e-47 |
Msa0165330 | Msa1203900 | 0.818260 | 2.150394e-52 | -8.615850e-47 |
Msa0165330 | Msa1207730 | 0.810334 | 1.213658e-50 | -8.615850e-47 |
Msa0165330 | Msa1296300 | 0.804398 | 2.201703e-49 | -8.615850e-47 |
Msa0165330 | Msa1329450 | 0.804108 | 2.530712e-49 | -8.615850e-47 |
Msa0165330 | Msa1372310 | 0.807414 | 5.114397e-50 | -8.615850e-47 |
Msa0165330 | Msa1438450 | 0.817855 | 2.655762e-52 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0165330 | MtrunA17_Chr1g0183681 | 97.531 | 1215 | 30 | 0 | 1 | 1215 | 1 | 1215 | 0.0 | 2453 |
Msa0165330 | MtrunA17_Chr8g0384531 | 32.965 | 634 | 332 | 12 | 327 | 907 | 319 | 912 | 1.73e-99 | 342 |
Msa0165330 | MtrunA17_Chr3g0137091 | 34.137 | 539 | 285 | 14 | 366 | 882 | 273 | 763 | 2.57e-78 | 283 |
Msa0165330 | MtrunA17_Chr4g0066741 | 35.081 | 496 | 264 | 13 | 384 | 871 | 181 | 626 | 6.78e-77 | 276 |
Msa0165330 | MtrunA17_Chr4g0040301 | 28.878 | 606 | 296 | 15 | 419 | 935 | 18 | 577 | 2.20e-75 | 265 |
Msa0165330 | MtrunA17_Chr4g0066651 | 32.874 | 508 | 283 | 13 | 391 | 881 | 989 | 1455 | 6.22e-75 | 274 |
Msa0165330 | MtrunA17_Chr5g0403921 | 31.299 | 508 | 300 | 10 | 394 | 887 | 187 | 659 | 1.25e-74 | 263 |
Msa0165330 | MtrunA17_Chr2g0286291 | 35.010 | 497 | 263 | 13 | 384 | 871 | 184 | 629 | 1.47e-74 | 269 |
Msa0165330 | MtrunA17_Chr5g0394201 | 33.212 | 548 | 284 | 18 | 353 | 884 | 341 | 822 | 2.65e-73 | 265 |
Msa0165330 | MtrunA17_Chr1g0205891 | 33.399 | 506 | 280 | 13 | 391 | 884 | 376 | 836 | 5.25e-72 | 261 |
Msa0165330 | MtrunA17_Chr3g0095091 | 32.171 | 516 | 279 | 13 | 391 | 884 | 571 | 1037 | 7.01e-69 | 254 |
Msa0165330 | MtrunA17_Chr5g0442141 | 32.941 | 510 | 283 | 13 | 391 | 884 | 617 | 1083 | 8.48e-69 | 254 |
Msa0165330 | MtrunA17_Chr5g0393461 | 29.469 | 621 | 333 | 17 | 394 | 957 | 187 | 759 | 1.23e-68 | 249 |
Msa0165330 | MtrunA17_Chr4g0052341 | 30.242 | 496 | 285 | 11 | 390 | 868 | 744 | 1195 | 4.00e-68 | 253 |
Msa0165330 | MtrunA17_Chr1g0163011 | 31.746 | 567 | 255 | 17 | 385 | 869 | 188 | 704 | 4.81e-68 | 244 |
Msa0165330 | MtrunA17_Chr4g0017211 | 31.522 | 552 | 275 | 12 | 394 | 883 | 1453 | 1963 | 9.35e-67 | 248 |
Msa0165330 | MtrunA17_Chr8g0348721 | 31.098 | 492 | 268 | 11 | 391 | 855 | 987 | 1434 | 4.56e-60 | 227 |
Msa0165330 | MtrunA17_Chr7g0232121 | 29.842 | 506 | 293 | 11 | 394 | 871 | 42 | 513 | 6.20e-58 | 216 |
Msa0165330 | MtrunA17_Chr7g0248031 | 30.488 | 492 | 272 | 11 | 391 | 855 | 994 | 1442 | 2.45e-57 | 218 |
Msa0165330 | MtrunA17_Chr1g0175191 | 31.161 | 353 | 194 | 9 | 372 | 718 | 502 | 811 | 1.09e-42 | 171 |
Msa0165330 | MtrunA17_Chr1g0175191 | 37.097 | 248 | 147 | 4 | 735 | 976 | 1062 | 1306 | 5.46e-39 | 159 |
Msa0165330 | MtrunA17_Chr7g0257101 | 28.173 | 394 | 231 | 7 | 373 | 752 | 560 | 915 | 2.86e-37 | 153 |
Msa0165330 | MtrunA17_Chr7g0257101 | 44.667 | 150 | 83 | 0 | 734 | 883 | 1191 | 1340 | 1.05e-34 | 145 |
Msa0165330 | MtrunA17_Chr7g0232971 | 27.226 | 584 | 329 | 22 | 369 | 883 | 696 | 1252 | 2.06e-33 | 140 |
Msa0165330 | MtrunA17_Chr7g0233021 | 26.552 | 580 | 320 | 20 | 377 | 883 | 640 | 1186 | 2.48e-32 | 137 |
Msa0165330 | MtrunA17_Chr7g0225791 | 25.312 | 561 | 330 | 16 | 383 | 883 | 709 | 1240 | 3.46e-32 | 136 |
Msa0165330 | MtrunA17_Chr1g0190381 | 35.211 | 213 | 118 | 3 | 732 | 930 | 185 | 391 | 2.31e-31 | 130 |
Msa0165330 | MtrunA17_Chr7g0231521 | 33.735 | 249 | 142 | 6 | 640 | 871 | 192 | 434 | 5.98e-29 | 125 |
Msa0165330 | MtrunA17_Chr7g0231521 | 28.077 | 260 | 150 | 5 | 394 | 650 | 42 | 267 | 1.01e-23 | 108 |
Msa0165330 | MtrunA17_Chr7g0233031 | 25.521 | 576 | 310 | 20 | 383 | 883 | 668 | 1199 | 5.38e-28 | 122 |
Msa0165330 | MtrunA17_Chr4g0069451 | 24.644 | 491 | 316 | 13 | 382 | 869 | 165 | 604 | 2.15e-27 | 119 |
Msa0165330 | MtrunA17_Chr4g0047081 | 24.910 | 558 | 336 | 19 | 383 | 883 | 659 | 1190 | 3.80e-26 | 117 |
Msa0165330 | MtrunA17_Chr7g0233001 | 25.100 | 502 | 272 | 16 | 443 | 883 | 17 | 475 | 1.77e-25 | 112 |
Msa0165330 | MtrunA17_Chr8g0352361 | 26.453 | 499 | 306 | 18 | 410 | 879 | 382 | 848 | 9.37e-25 | 112 |
Msa0165330 | MtrunA17_Chr2g0296421 | 24.950 | 497 | 315 | 17 | 410 | 879 | 532 | 997 | 1.44e-24 | 111 |
Msa0165330 | MtrunA17_Chr1g0168031 | 34.171 | 199 | 127 | 3 | 706 | 901 | 955 | 1152 | 3.71e-22 | 103 |
Msa0165330 | MtrunA17_Chr2g0320751 | 30.841 | 214 | 144 | 3 | 691 | 901 | 803 | 1015 | 4.72e-21 | 100 |
Msa0165330 | MtrunA17_Chr2g0281601 | 34.395 | 157 | 98 | 2 | 751 | 903 | 1148 | 1303 | 4.06e-20 | 97.4 |
Msa0165330 | MtrunA17_Chr1g0212331 | 38.333 | 120 | 74 | 0 | 753 | 872 | 887 | 1006 | 4.50e-20 | 97.1 |
Msa0165330 | MtrunA17_Chr1g0212331 | 24.367 | 316 | 180 | 10 | 442 | 718 | 404 | 699 | 4.16e-11 | 67.8 |
Msa0165330 | MtrunA17_Chr7g0255821 | 34.266 | 143 | 90 | 2 | 734 | 872 | 647 | 789 | 9.05e-18 | 89.4 |
Msa0165330 | MtrunA17_Chr2g0320781 | 33.557 | 149 | 93 | 2 | 730 | 872 | 88 | 236 | 3.03e-17 | 82.8 |
Msa0165330 | MtrunA17_Chr7g0232991 | 32.432 | 148 | 95 | 2 | 730 | 872 | 456 | 603 | 2.98e-16 | 84.0 |
Msa0165330 | MtrunA17_Chr4g0024921 | 30.833 | 120 | 83 | 0 | 753 | 872 | 784 | 903 | 6.92e-14 | 76.6 |
Msa0165330 | MtrunA17_Chr3g0114161 | 31.013 | 158 | 100 | 5 | 733 | 883 | 1048 | 1203 | 3.54e-13 | 74.7 |
Msa0165330 | MtrunA17_Chr5g0437621 | 29.927 | 137 | 90 | 2 | 753 | 883 | 1123 | 1259 | 3.27e-12 | 71.6 |
Msa0165330 | MtrunA17_Chr7g0224051 | 29.286 | 140 | 93 | 3 | 750 | 883 | 933 | 1072 | 1.91e-11 | 68.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0165330 | AT2G18760.4 | 64.039 | 1218 | 402 | 12 | 1 | 1214 | 1 | 1186 | 0.0 | 1509 |
Msa0165330 | AT2G18760.1 | 64.039 | 1218 | 402 | 12 | 1 | 1214 | 1 | 1186 | 0.0 | 1509 |
Msa0165330 | AT2G18760.2 | 64.039 | 1218 | 402 | 12 | 1 | 1214 | 1 | 1186 | 0.0 | 1509 |
Msa0165330 | AT2G18760.7 | 64.039 | 1218 | 402 | 12 | 1 | 1214 | 1 | 1186 | 0.0 | 1509 |
Msa0165330 | AT2G18760.5 | 64.039 | 1218 | 402 | 12 | 1 | 1214 | 1 | 1186 | 0.0 | 1509 |
Msa0165330 | AT2G18760.6 | 64.039 | 1218 | 402 | 12 | 1 | 1214 | 1 | 1186 | 0.0 | 1509 |
Msa0165330 | AT2G18760.3 | 70.358 | 867 | 229 | 7 | 351 | 1214 | 404 | 1245 | 0.0 | 1234 |
Msa0165330 | AT2G18760.3 | 46.825 | 378 | 192 | 6 | 1 | 377 | 1 | 370 | 5.70e-78 | 281 |
Msa0165330 | AT5G63950.1 | 34.286 | 595 | 297 | 10 | 358 | 903 | 351 | 900 | 4.01e-99 | 341 |
Msa0165330 | AT5G63950.2 | 33.962 | 583 | 298 | 9 | 358 | 903 | 351 | 883 | 8.05e-93 | 323 |
Msa0165330 | AT5G19310.2 | 35.029 | 511 | 264 | 15 | 391 | 884 | 122 | 581 | 7.61e-77 | 271 |
Msa0165330 | AT2G25170.2 | 34.314 | 510 | 296 | 11 | 384 | 882 | 283 | 764 | 4.20e-76 | 277 |
Msa0165330 | AT2G25170.1 | 34.314 | 510 | 296 | 11 | 384 | 882 | 266 | 747 | 5.05e-76 | 276 |
Msa0165330 | AT2G25170.4 | 34.314 | 510 | 296 | 11 | 384 | 882 | 266 | 747 | 5.05e-76 | 276 |
Msa0165330 | AT2G25170.3 | 34.314 | 510 | 296 | 11 | 384 | 882 | 292 | 773 | 6.84e-76 | 276 |
Msa0165330 | AT5G19310.1 | 35.029 | 511 | 264 | 15 | 391 | 884 | 386 | 845 | 2.21e-75 | 272 |
Msa0165330 | AT3G06010.1 | 32.381 | 630 | 330 | 20 | 281 | 884 | 304 | 863 | 1.45e-73 | 267 |
Msa0165330 | AT3G06400.3 | 34.000 | 500 | 270 | 13 | 381 | 871 | 179 | 627 | 1.55e-73 | 266 |
Msa0165330 | AT3G06400.2 | 34.000 | 500 | 270 | 13 | 381 | 871 | 179 | 627 | 1.66e-73 | 266 |
Msa0165330 | AT3G06400.1 | 34.000 | 500 | 270 | 13 | 381 | 871 | 179 | 627 | 1.69e-73 | 266 |
Msa0165330 | AT2G28290.2 | 32.283 | 508 | 286 | 11 | 391 | 881 | 754 | 1220 | 2.13e-73 | 270 |
Msa0165330 | AT2G28290.3 | 32.283 | 508 | 286 | 11 | 391 | 881 | 754 | 1220 | 2.13e-73 | 270 |
Msa0165330 | AT2G28290.4 | 32.283 | 508 | 286 | 11 | 391 | 881 | 754 | 1220 | 2.13e-73 | 270 |
Msa0165330 | AT2G28290.6 | 32.283 | 508 | 286 | 11 | 391 | 881 | 755 | 1221 | 2.15e-73 | 270 |
Msa0165330 | AT2G28290.1 | 32.283 | 508 | 286 | 11 | 391 | 881 | 754 | 1220 | 2.30e-73 | 270 |
Msa0165330 | AT2G28290.5 | 32.283 | 508 | 286 | 11 | 391 | 881 | 755 | 1221 | 2.34e-73 | 270 |
Msa0165330 | AT2G13370.1 | 33.006 | 509 | 284 | 12 | 390 | 884 | 624 | 1089 | 1.01e-71 | 264 |
Msa0165330 | AT2G13370.2 | 33.006 | 509 | 284 | 12 | 390 | 884 | 624 | 1089 | 1.01e-71 | 264 |
Msa0165330 | AT2G13370.3 | 33.006 | 509 | 284 | 12 | 390 | 884 | 624 | 1089 | 1.01e-71 | 264 |
Msa0165330 | AT5G18620.1 | 33.141 | 519 | 282 | 14 | 379 | 884 | 179 | 645 | 2.08e-71 | 260 |
Msa0165330 | AT5G18620.2 | 33.141 | 519 | 282 | 14 | 379 | 884 | 179 | 645 | 2.30e-71 | 260 |
Msa0165330 | AT3G54280.1 | 32.014 | 556 | 268 | 13 | 394 | 883 | 1454 | 1965 | 2.72e-71 | 263 |
Msa0165330 | AT3G54280.2 | 32.014 | 556 | 268 | 13 | 394 | 883 | 1485 | 1996 | 3.62e-71 | 263 |
Msa0165330 | AT3G19210.3 | 30.728 | 563 | 307 | 15 | 394 | 906 | 183 | 712 | 1.43e-68 | 247 |
Msa0165330 | AT3G19210.1 | 30.442 | 565 | 306 | 15 | 394 | 906 | 183 | 712 | 3.96e-68 | 248 |
Msa0165330 | AT5G66750.1 | 29.206 | 630 | 380 | 16 | 316 | 923 | 130 | 715 | 8.80e-68 | 244 |
Msa0165330 | AT4G31900.1 | 32.157 | 510 | 282 | 13 | 384 | 881 | 218 | 675 | 1.29e-67 | 249 |
Msa0165330 | AT4G31900.3 | 32.157 | 510 | 282 | 13 | 384 | 881 | 218 | 675 | 1.31e-67 | 249 |
Msa0165330 | AT4G31900.2 | 32.157 | 510 | 282 | 13 | 384 | 881 | 177 | 634 | 1.49e-67 | 249 |
Msa0165330 | AT5G44800.1 | 31.154 | 520 | 296 | 12 | 390 | 891 | 688 | 1163 | 3.02e-67 | 250 |
Msa0165330 | AT3G19210.2 | 30.142 | 564 | 307 | 15 | 394 | 906 | 183 | 710 | 2.84e-66 | 243 |
Msa0165330 | AT2G44980.3 | 29.481 | 597 | 347 | 18 | 394 | 955 | 54 | 611 | 1.68e-62 | 231 |
Msa0165330 | AT2G02090.1 | 29.915 | 585 | 290 | 16 | 377 | 885 | 198 | 738 | 1.57e-61 | 226 |
Msa0165330 | AT2G46020.5 | 30.894 | 492 | 269 | 10 | 391 | 855 | 981 | 1428 | 4.87e-60 | 227 |
Msa0165330 | AT2G46020.1 | 30.894 | 492 | 269 | 10 | 391 | 855 | 981 | 1428 | 4.87e-60 | 227 |
Msa0165330 | AT2G46020.6 | 30.894 | 492 | 269 | 10 | 391 | 855 | 981 | 1428 | 4.87e-60 | 227 |
Msa0165330 | AT2G44980.2 | 29.097 | 598 | 349 | 19 | 394 | 955 | 54 | 612 | 2.03e-59 | 221 |
Msa0165330 | AT2G44980.1 | 28.866 | 582 | 352 | 16 | 394 | 955 | 54 | 593 | 3.27e-59 | 220 |
Msa0165330 | AT2G46020.2 | 30.691 | 492 | 271 | 10 | 391 | 855 | 981 | 1429 | 4.52e-59 | 224 |
Msa0165330 | AT2G46020.3 | 30.691 | 492 | 271 | 10 | 391 | 855 | 981 | 1429 | 4.52e-59 | 224 |
Msa0165330 | AT2G46020.4 | 30.691 | 492 | 271 | 10 | 391 | 855 | 981 | 1429 | 4.52e-59 | 224 |
Msa0165330 | AT1G08600.4 | 28.326 | 639 | 320 | 15 | 378 | 914 | 706 | 1308 | 7.24e-58 | 220 |
Msa0165330 | AT1G08600.3 | 28.326 | 639 | 320 | 15 | 378 | 914 | 706 | 1308 | 7.24e-58 | 220 |
Msa0165330 | AT1G08600.2 | 28.326 | 639 | 320 | 15 | 378 | 914 | 706 | 1308 | 7.24e-58 | 220 |
Msa0165330 | AT1G08600.1 | 30.275 | 436 | 232 | 6 | 551 | 914 | 852 | 1287 | 1.06e-46 | 184 |
Msa0165330 | AT3G12810.1 | 32.479 | 351 | 190 | 7 | 373 | 718 | 518 | 826 | 3.30e-46 | 183 |
Msa0165330 | AT3G12810.1 | 46.429 | 168 | 89 | 1 | 735 | 901 | 1075 | 1242 | 4.06e-41 | 166 |
Msa0165330 | AT3G12810.2 | 32.479 | 351 | 190 | 7 | 373 | 718 | 514 | 822 | 3.38e-46 | 183 |
Msa0165330 | AT3G12810.2 | 46.429 | 168 | 89 | 1 | 735 | 901 | 1071 | 1238 | 4.23e-41 | 166 |
Msa0165330 | AT1G03750.1 | 39.565 | 230 | 127 | 5 | 727 | 951 | 520 | 742 | 2.52e-45 | 177 |
Msa0165330 | AT1G03750.1 | 28.135 | 327 | 185 | 4 | 381 | 695 | 129 | 417 | 1.10e-37 | 154 |
Msa0165330 | AT3G57300.1 | 27.692 | 390 | 220 | 9 | 362 | 729 | 551 | 900 | 1.57e-36 | 151 |
Msa0165330 | AT3G57300.1 | 41.520 | 171 | 98 | 1 | 734 | 902 | 1205 | 1375 | 4.34e-35 | 146 |
Msa0165330 | AT3G57300.4 | 27.692 | 390 | 220 | 9 | 362 | 729 | 551 | 900 | 1.57e-36 | 151 |
Msa0165330 | AT3G57300.4 | 41.520 | 171 | 98 | 1 | 734 | 902 | 1205 | 1375 | 4.34e-35 | 146 |
Msa0165330 | AT3G57300.3 | 27.692 | 390 | 220 | 9 | 362 | 729 | 551 | 900 | 4.09e-36 | 149 |
Msa0165330 | AT3G57300.2 | 27.919 | 394 | 247 | 9 | 362 | 729 | 551 | 933 | 1.95e-35 | 147 |
Msa0165330 | AT3G57300.2 | 41.520 | 171 | 98 | 1 | 734 | 902 | 1238 | 1408 | 4.76e-35 | 146 |
Msa0165330 | AT1G05490.1 | 26.040 | 553 | 344 | 17 | 375 | 875 | 806 | 1345 | 1.12e-29 | 129 |
Msa0165330 | AT1G48310.1 | 24.286 | 490 | 319 | 10 | 382 | 869 | 163 | 602 | 2.03e-29 | 126 |
Msa0165330 | AT1G48310.2 | 24.082 | 490 | 320 | 11 | 382 | 869 | 168 | 607 | 2.46e-29 | 126 |
Msa0165330 | AT1G48310.3 | 24.145 | 497 | 311 | 13 | 382 | 869 | 163 | 602 | 7.96e-29 | 124 |
Msa0165330 | AT3G24340.1 | 23.679 | 549 | 339 | 17 | 387 | 889 | 573 | 1087 | 1.25e-24 | 112 |
Msa0165330 | AT2G21450.2 | 24.575 | 529 | 295 | 17 | 410 | 879 | 293 | 776 | 6.08e-23 | 106 |
Msa0165330 | AT2G21450.1 | 24.575 | 529 | 295 | 17 | 410 | 879 | 286 | 769 | 6.39e-23 | 106 |
Msa0165330 | AT1G02670.1 | 22.689 | 595 | 339 | 20 | 384 | 901 | 127 | 677 | 1.78e-22 | 104 |
Msa0165330 | AT2G21450.3 | 24.575 | 529 | 295 | 17 | 410 | 879 | 195 | 678 | 1.79e-22 | 104 |
Msa0165330 | AT1G02670.7 | 22.689 | 595 | 339 | 20 | 384 | 901 | 116 | 666 | 2.72e-22 | 103 |
Msa0165330 | AT5G22750.1 | 31.308 | 214 | 143 | 3 | 691 | 901 | 816 | 1028 | 2.94e-22 | 104 |
Msa0165330 | AT5G22750.1 | 22.764 | 369 | 180 | 8 | 411 | 717 | 414 | 739 | 1.57e-15 | 82.8 |
Msa0165330 | AT1G11100.2 | 33.333 | 186 | 112 | 4 | 720 | 902 | 1092 | 1268 | 2.02e-21 | 102 |
Msa0165330 | AT1G11100.4 | 33.333 | 186 | 112 | 4 | 720 | 902 | 1093 | 1269 | 2.02e-21 | 102 |
Msa0165330 | AT1G11100.3 | 33.333 | 186 | 112 | 4 | 720 | 902 | 950 | 1126 | 2.07e-21 | 102 |
Msa0165330 | AT1G11100.1 | 33.333 | 186 | 112 | 4 | 720 | 902 | 1049 | 1225 | 2.27e-21 | 101 |
Msa0165330 | AT1G11100.5 | 33.333 | 186 | 112 | 4 | 720 | 902 | 906 | 1082 | 2.33e-21 | 101 |
Msa0165330 | AT5G05130.1 | 39.855 | 138 | 79 | 2 | 755 | 889 | 729 | 865 | 6.85e-21 | 99.8 |
Msa0165330 | AT1G61140.1 | 30.387 | 181 | 118 | 2 | 703 | 879 | 1075 | 1251 | 1.04e-20 | 99.8 |
Msa0165330 | AT1G61140.3 | 30.387 | 181 | 118 | 2 | 703 | 879 | 917 | 1093 | 1.08e-20 | 99.4 |
Msa0165330 | AT2G16390.2 | 22.574 | 505 | 329 | 11 | 410 | 882 | 374 | 848 | 1.44e-20 | 99.0 |
Msa0165330 | AT2G16390.1 | 22.574 | 505 | 329 | 11 | 410 | 882 | 371 | 845 | 3.16e-20 | 97.8 |
Msa0165330 | AT5G43530.1 | 34.437 | 151 | 98 | 1 | 751 | 901 | 1127 | 1276 | 1.44e-19 | 95.9 |
Msa0165330 | AT3G20010.2 | 31.395 | 172 | 103 | 2 | 716 | 872 | 551 | 722 | 1.57e-18 | 92.0 |
Msa0165330 | AT3G20010.3 | 31.395 | 172 | 103 | 2 | 716 | 872 | 576 | 747 | 1.68e-18 | 92.0 |
Msa0165330 | AT3G20010.1 | 31.395 | 172 | 103 | 2 | 716 | 872 | 842 | 1013 | 2.15e-18 | 92.0 |
Msa0165330 | AT3G20010.5 | 31.395 | 172 | 103 | 2 | 716 | 872 | 842 | 1013 | 2.15e-18 | 92.0 |
Msa0165330 | AT3G20010.7 | 31.395 | 172 | 103 | 2 | 716 | 872 | 842 | 1013 | 2.15e-18 | 92.0 |
Msa0165330 | AT1G50410.2 | 36.667 | 120 | 76 | 0 | 753 | 872 | 828 | 947 | 1.38e-17 | 89.4 |
Msa0165330 | AT1G50410.1 | 36.667 | 120 | 76 | 0 | 753 | 872 | 828 | 947 | 1.38e-17 | 89.4 |
Msa0165330 | AT1G50410.3 | 36.667 | 120 | 76 | 0 | 753 | 872 | 828 | 947 | 1.38e-17 | 89.4 |
Msa0165330 | AT1G05120.1 | 31.667 | 120 | 82 | 0 | 753 | 872 | 682 | 801 | 2.10e-15 | 82.0 |
Msa0165330 | AT1G05120.2 | 31.667 | 120 | 82 | 0 | 753 | 872 | 725 | 844 | 2.43e-15 | 82.0 |
Msa0165330 | AT1G02670.6 | 29.114 | 158 | 110 | 1 | 746 | 901 | 505 | 662 | 2.35e-13 | 75.1 |
Msa0165330 | AT1G02670.3 | 29.114 | 158 | 110 | 1 | 746 | 901 | 532 | 689 | 2.72e-13 | 75.1 |
Msa0165330 | AT3G42670.2 | 30.387 | 181 | 114 | 5 | 709 | 883 | 1036 | 1210 | 4.21e-12 | 71.6 |
Msa0165330 | AT3G42670.3 | 30.387 | 181 | 114 | 5 | 709 | 883 | 1036 | 1210 | 4.21e-12 | 71.6 |
Msa0165330 | AT3G42670.1 | 30.387 | 181 | 114 | 5 | 709 | 883 | 1036 | 1210 | 4.21e-12 | 71.6 |
Msa0165330 | AT3G42670.4 | 30.387 | 181 | 114 | 5 | 709 | 883 | 1038 | 1212 | 4.43e-12 | 71.6 |
Msa0165330 | AT5G20420.1 | 40.506 | 79 | 47 | 0 | 805 | 883 | 1138 | 1216 | 1.88e-11 | 69.3 |
Msa0165330 | AT1G48310.4 | 21.374 | 393 | 255 | 12 | 382 | 771 | 163 | 504 | 7.74e-11 | 66.6 |
Find 299 sgRNAs with CRISPR-Local
Find 513 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATACAAGTATTGTCATTTC+TGG | 0.147108 | 1_4:+45788893 | Msa0165330:CDS |
AAAAGAACTTGTGATGTTAT+TGG | 0.160627 | 1_4:+45792561 | Msa0165330:three_prime_UTR |
TTCTTGATTACCTCGAATTT+TGG | 0.174611 | 1_4:-45791927 | None:intergenic |
GAATATCCGCCAACTCTTAT+AGG | 0.177890 | 1_4:-45789473 | None:intergenic |
ATCTCATGACACGATTTATT+AGG | 0.183607 | 1_4:-45789169 | None:intergenic |
TCTGAAGATGTAAATATTAT+TGG | 0.184454 | 1_4:+45791117 | Msa0165330:CDS |
CCCTCTCCTCTCTGGGAAAC+TGG | 0.204356 | 1_4:+45786405 | Msa0165330:five_prime_UTR |
AAAAGTTCAACATGGAATTT+AGG | 0.235396 | 1_4:-45789011 | None:intergenic |
GCCACCTTTCTGTTGGAAAA+AGG | 0.235886 | 1_4:-45792074 | None:intergenic |
CGTTCAGGATTTCCATAATC+TGG | 0.242674 | 1_4:-45790165 | None:intergenic |
ACAGCAGAAAAGGTTCTTTA+AGG | 0.244059 | 1_4:+45791011 | Msa0165330:CDS |
AGAGCTTCAAATATGTTATC+AGG | 0.245190 | 1_4:-45788774 | None:intergenic |
CGAATTCTGCTTTCTACTTT+AGG | 0.253420 | 1_4:+45786595 | Msa0165330:CDS |
CTTTGCTATTGTTTAGCAAC+TGG | 0.262300 | 1_4:-45791808 | None:intergenic |
AAAACAGAGAATGGCTTTAA+TGG | 0.269139 | 1_4:+45790350 | Msa0165330:CDS |
GGAGGCAGGAATTCACTTTA+TGG | 0.269702 | 1_4:+45790075 | Msa0165330:CDS |
ACTGCTGATCACAGAAGTTT+AGG | 0.271476 | 1_4:+45792287 | Msa0165330:three_prime_UTR |
ATTAATAAGTTATTGTTATA+CGG | 0.271802 | 1_4:-45786537 | None:intergenic |
TCCCAGAGAGGAGAGGGTTC+TGG | 0.278230 | 1_4:-45786399 | None:intergenic |
CCTGTTCAAGAATATGTTAA+AGG | 0.283069 | 1_4:+45792159 | Msa0165330:CDS |
TTGATGAAGGGCATAAAATT+AGG | 0.290044 | 1_4:+45789279 | Msa0165330:CDS |
CTCATTGTCGTCTAGAGGTT+TGG | 0.294525 | 1_4:-45787947 | None:intergenic |
GCCTTCAGCAATCCAGATTA+TGG | 0.299383 | 1_4:+45790153 | Msa0165330:CDS |
CTGAAGATGTAAATATTATT+GGG | 0.301082 | 1_4:+45791118 | Msa0165330:CDS |
CCGAGACGCTTTCATGATTT+CGG | 0.301794 | 1_4:-45791706 | None:intergenic |
TATGCTGCTGGGGCTTCTTC+TGG | 0.303252 | 1_4:+45791875 | Msa0165330:CDS |
TGTTCCCTTTCAAGTAGGTC+TGG | 0.306886 | 1_4:-45790129 | None:intergenic |
CAAAGAGCTGGTGGAATTAT+TGG | 0.309829 | 1_4:+45788846 | Msa0165330:CDS |
TCTTTCCTTTGAACTGAGTT+AGG | 0.313353 | 1_4:-45786489 | None:intergenic |
CTGCTGATCACAGAAGTTTA+GGG | 0.315421 | 1_4:+45792288 | Msa0165330:three_prime_UTR |
CACTGAGGTGGAGGAAATAT+TGG | 0.315867 | 1_4:+45790050 | Msa0165330:CDS |
CCACTTGTGGACATATTTAC+CGG | 0.320575 | 1_4:+45790304 | Msa0165330:CDS |
TTATGAGCAGCTAAGGATAT+TGG | 0.320593 | 1_4:+45789217 | Msa0165330:CDS |
AGAGCAATAGAATTTGAAAT+TGG | 0.326387 | 1_4:+45786895 | Msa0165330:CDS |
TCTCATGACACGATTTATTA+GGG | 0.326833 | 1_4:-45789168 | None:intergenic |
ATGTGAGGAGAATGAGAATT+TGG | 0.329806 | 1_4:+45786969 | Msa0165330:CDS |
GCCTAAGCAGCTTGGAGGTT+GGG | 0.332101 | 1_4:-45787855 | None:intergenic |
CAATAATTCCACCAGCTCTT+TGG | 0.338841 | 1_4:-45788845 | None:intergenic |
CATTGTCGCAGGAGTGTAAC+AGG | 0.339026 | 1_4:-45788963 | None:intergenic |
GTTGCAGTTACCGAAGATAA+AGG | 0.339108 | 1_4:+45786787 | Msa0165330:CDS |
TCAAGCTTCGGTACCTCTTC+AGG | 0.343037 | 1_4:-45787877 | None:intergenic |
CCTTTAACATATTCTTGAAC+AGG | 0.343556 | 1_4:-45792159 | None:intergenic |
TTCTTCTAAACTTTCACAAC+TGG | 0.352979 | 1_4:-45788685 | None:intergenic |
GTTCTCGATGCAGCCTCTGC+TGG | 0.357955 | 1_4:+45787273 | Msa0165330:CDS |
TTGAATGTGGATGGAGAAAC+TGG | 0.358958 | 1_4:+45791060 | Msa0165330:CDS |
ATATAGTCAAACTGCTGAAC+TGG | 0.360504 | 1_4:+45791170 | Msa0165330:CDS |
TCTTATAGGAACTGCAAATT+CGG | 0.361649 | 1_4:-45789459 | None:intergenic |
TTCTTCTGAGGATAGACAAC+TGG | 0.361961 | 1_4:+45788041 | Msa0165330:CDS |
TTACGACTAGTTGATGCTTC+AGG | 0.365157 | 1_4:-45787745 | None:intergenic |
TGATCATCTTTGACCCTGAT+TGG | 0.365360 | 1_4:+45790463 | Msa0165330:CDS |
ATCATTATTCCCTTTATCTT+CGG | 0.366891 | 1_4:-45786797 | None:intergenic |
TTTGTAGCTGTTTGCAAGCT+AGG | 0.367235 | 1_4:-45789322 | None:intergenic |
AGTTATCTTTAGTTTAGTTA+AGG | 0.367658 | 1_4:+45787143 | Msa0165330:CDS |
TCATCTGTTCGGCGGAAGTT+TGG | 0.369276 | 1_4:+45791770 | Msa0165330:CDS |
GCTAGGGTAACTTCGGCGTT+TGG | 0.369888 | 1_4:-45789305 | None:intergenic |
CTGTAGATGTTAGAACTTCC+AGG | 0.373491 | 1_4:+45791996 | Msa0165330:CDS |
TTTATTGCAGAAAATGCTAA+TGG | 0.375440 | 1_4:+45788648 | Msa0165330:intron |
ACCCAGAACCCTCTCCTCTC+TGG | 0.375825 | 1_4:+45786397 | Msa0165330:five_prime_UTR |
ATGTGGCGTTCGATGTCTTC+GGG | 0.381605 | 1_4:-45786634 | None:intergenic |
ACCAGTTGCTTAACATTGAA+TGG | 0.383660 | 1_4:+45789243 | Msa0165330:CDS |
GAAATAGCGACTCTGCATAA+AGG | 0.387468 | 1_4:+45792181 | Msa0165330:CDS |
CCCAGAGAGGAGAGGGTTCT+GGG | 0.388201 | 1_4:-45786398 | None:intergenic |
ACACGATTCTGCTCAGGATC+TGG | 0.388344 | 1_4:+45789034 | Msa0165330:CDS |
AGCAGGTTGACAAAAGTAAT+GGG | 0.397472 | 1_4:+45791262 | Msa0165330:CDS |
GAAGAAAACGAAGGCTCAAT+TGG | 0.398710 | 1_4:+45787062 | Msa0165330:CDS |
TCATTGTCGTCTAGAGGTTT+GGG | 0.400134 | 1_4:-45787946 | None:intergenic |
TCTTCGTATGTAACATTAGA+AGG | 0.401619 | 1_4:+45788738 | Msa0165330:CDS |
TATGAGCAGCTAAGGATATT+GGG | 0.401792 | 1_4:+45789218 | Msa0165330:CDS |
TCACTCAGTTTGTTCTGAAT+AGG | 0.402502 | 1_4:-45789374 | None:intergenic |
ATCTGAATACAGATTCAAAA+AGG | 0.411403 | 1_4:+45787974 | Msa0165330:CDS |
AGAGGATCTTCAAGAGGAAA+AGG | 0.413502 | 1_4:+45791234 | Msa0165330:CDS |
ACATACTATACTTGATAGTC+TGG | 0.414240 | 1_4:-45792232 | None:intergenic |
TGGGGCACATCAAGAAAATC+AGG | 0.418341 | 1_4:+45791137 | Msa0165330:CDS |
TGCAGCTCTTTGTGCAACCT+TGG | 0.418890 | 1_4:-45791657 | None:intergenic |
TAGCTCAAGTGCTTAACGTT+TGG | 0.420004 | 1_4:+45790208 | Msa0165330:CDS |
AACCCCTTCAACTTATGAAA+AGG | 0.420557 | 1_4:-45787703 | None:intergenic |
CACTCCTGCGACAATGGAAA+AGG | 0.423981 | 1_4:+45788970 | Msa0165330:CDS |
CATGATCAAATCATGGTTCA+TGG | 0.424447 | 1_4:-45791591 | None:intergenic |
TCAGTCGAAGGATTCCAATC+AGG | 0.425501 | 1_4:-45790477 | None:intergenic |
ATACAAGTATTGTCATTTCT+GGG | 0.429969 | 1_4:+45788894 | Msa0165330:CDS |
TGGACATATTTACCGGAGAA+TGG | 0.430465 | 1_4:+45790311 | Msa0165330:CDS |
CAATTCAATGGAAGAAGAAC+AGG | 0.432561 | 1_4:+45786570 | Msa0165330:exon |
GCGTTCGATGTCTTCGGGAT+TGG | 0.433413 | 1_4:-45786629 | None:intergenic |
GATTGATGAGGGTGGTGGTT+CGG | 0.433672 | 1_4:+45786999 | Msa0165330:CDS |
CCCATTCAATGTTAAGCAAC+TGG | 0.434195 | 1_4:-45789244 | None:intergenic |
AGAGAGCGTGCATGGCGAAT+TGG | 0.435088 | 1_4:+45790874 | Msa0165330:CDS |
CCAGTTGCTTAACATTGAAT+GGG | 0.435701 | 1_4:+45789244 | Msa0165330:CDS |
AAATTCAATGGATATGCTGC+TGG | 0.439036 | 1_4:+45791863 | Msa0165330:CDS |
GGCCTAAGCAGCTTGGAGGT+TGG | 0.439109 | 1_4:-45787856 | None:intergenic |
AGGGCTCCTGAAAATTCATC+TGG | 0.440060 | 1_4:+45792016 | Msa0165330:CDS |
GTTCCCTTTCAAGTAGGTCT+GGG | 0.440324 | 1_4:-45790128 | None:intergenic |
ACCCCTTCAACTTATGAAAA+GGG | 0.441098 | 1_4:-45787702 | None:intergenic |
TCAGCTTTAGCTTTCGATAA+CGG | 0.442383 | 1_4:-45786856 | None:intergenic |
GGGTTGGGGACAAATCTTAC+TGG | 0.443116 | 1_4:+45790429 | Msa0165330:CDS |
TGAAGAACCCACAGCAGAAA+AGG | 0.444273 | 1_4:+45791001 | Msa0165330:CDS |
CATCTGATGAATCGCCAAGC+AGG | 0.448274 | 1_4:+45791831 | Msa0165330:CDS |
CTGTTACACTCCTGCGACAA+TGG | 0.449553 | 1_4:+45788964 | Msa0165330:CDS |
TTTGTAGGCTAGGAATGATT+CGG | 0.450825 | 1_4:+45786765 | Msa0165330:intron |
CGTGTCATGAGATCAGAATC+TGG | 0.451318 | 1_4:+45789179 | Msa0165330:CDS |
AAATAGCGACTCTGCATAAA+GGG | 0.451334 | 1_4:+45792182 | Msa0165330:CDS |
CCAGTTTCCCAGAGAGGAGA+GGG | 0.454635 | 1_4:-45786405 | None:intergenic |
ATCAAAAGGTTGGTGTTCAA+TGG | 0.454705 | 1_4:+45788805 | Msa0165330:CDS |
AAGATACTTGCTCTGGTGTA+AGG | 0.455144 | 1_4:-45790005 | None:intergenic |
GAGAAATATTTGACCACTTG+TGG | 0.456900 | 1_4:+45790291 | Msa0165330:CDS |
TTCTTGCTGCCGATAGGTTG+AGG | 0.458693 | 1_4:+45787034 | Msa0165330:CDS |
GTCTCATCTTCTCCTCATCA+TGG | 0.459580 | 1_4:-45791619 | None:intergenic |
AGAGGTTTGGGTAATTGCAT+TGG | 0.463309 | 1_4:-45787934 | None:intergenic |
AACTCAGTTCAAAGGAAAGA+AGG | 0.465466 | 1_4:+45786492 | Msa0165330:five_prime_UTR |
AGGAAATATTGGATGGAGGC+AGG | 0.465489 | 1_4:+45790061 | Msa0165330:CDS |
GCCGGGCTTGAGCATCAGTT+TGG | 0.465538 | 1_4:+45791962 | Msa0165330:CDS |
TCATCTATAAGCTTCTTCTT+CGG | 0.468209 | 1_4:-45787177 | None:intergenic |
CTTTAAGGCCCGAGATATGA+AGG | 0.469277 | 1_4:+45791026 | Msa0165330:CDS |
ATTGGTGATGAGATGGGTCT+TGG | 0.469913 | 1_4:+45788864 | Msa0165330:CDS |
ATGCTCAAGCCCGGCACTGA+TGG | 0.470923 | 1_4:-45791954 | None:intergenic |
TTATCTTCTCCGACGAATGA+AGG | 0.471261 | 1_4:+45789930 | Msa0165330:CDS |
CGCTTGGTCCATTTCCTACC+AGG | 0.471849 | 1_4:-45788015 | None:intergenic |
AATGTGGCGTTCGATGTCTT+CGG | 0.472099 | 1_4:-45786635 | None:intergenic |
GTCCATTTCCTACCAGGCCC+AGG | 0.474923 | 1_4:-45788009 | None:intergenic |
TAGTTCAGCATTTCAAGGAC+AGG | 0.475898 | 1_4:+45792116 | Msa0165330:CDS |
AACGGGATGTAACTATATAT+AGG | 0.476551 | 1_4:+45790902 | Msa0165330:CDS |
AGCTCTGTTTGACTATCAAA+AGG | 0.478905 | 1_4:+45788791 | Msa0165330:CDS |
TTCAGGCCTAAGCAGCTTGG+AGG | 0.479949 | 1_4:-45787860 | None:intergenic |
TACAACTGCCACCTTTCTGT+TGG | 0.480183 | 1_4:-45792081 | None:intergenic |
CCTCTCCTCTCTGGGAAACT+GGG | 0.481284 | 1_4:+45786406 | Msa0165330:five_prime_UTR |
AGACCTACTTGAAAGGGAAC+AGG | 0.482185 | 1_4:+45790131 | Msa0165330:CDS |
GCTTAACGTTTGGAAGGAGC+AGG | 0.482366 | 1_4:+45790218 | Msa0165330:CDS |
CTCTTCAGGCCTAAGCAGCT+TGG | 0.482921 | 1_4:-45787863 | None:intergenic |
GACCTGGGCCTGGTAGGAAA+TGG | 0.485311 | 1_4:+45788007 | Msa0165330:CDS |
TGCTGGGGCTTCTTCTGGTA+AGG | 0.487387 | 1_4:+45791880 | Msa0165330:CDS |
ATGTGACGAAAACAATTCAA+TGG | 0.491428 | 1_4:+45786558 | Msa0165330:exon |
GATGATGCAGTTGGTGATGA+TGG | 0.492105 | 1_4:+45791201 | Msa0165330:CDS |
TTTGGCAAGCACTGAGGTGG+AGG | 0.493553 | 1_4:+45790041 | Msa0165330:CDS |
AGGGATGAATTGGTTAGAAA+AGG | 0.496652 | 1_4:+45787670 | Msa0165330:CDS |
TCCAACCTGAAGTAATGATT+CGG | 0.496931 | 1_4:+45792041 | Msa0165330:CDS |
GGTTATGCAGTTCTTGATGA+AGG | 0.496995 | 1_4:+45789266 | Msa0165330:CDS |
TGCAGCCTGAGAAAATGATC+TGG | 0.497771 | 1_4:-45787824 | None:intergenic |
TTGCAGTTACCGAAGATAAA+GGG | 0.499208 | 1_4:+45786788 | Msa0165330:CDS |
CCCAGAACCCTCTCCTCTCT+GGG | 0.499929 | 1_4:+45786398 | Msa0165330:five_prime_UTR |
TTCATTCGTCGGAGAAGATA+AGG | 0.501540 | 1_4:-45789928 | None:intergenic |
ATGGCGAATTGGTCAGAAAC+GGG | 0.502201 | 1_4:+45790885 | Msa0165330:CDS |
AGAATGAGAATTTGGACGAA+GGG | 0.503031 | 1_4:+45786977 | Msa0165330:CDS |
AGGGTCAAATGGTTCCCATT+GGG | 0.503238 | 1_4:+45792201 | Msa0165330:CDS |
CAGCATAGTTCAGCATTTCA+AGG | 0.504315 | 1_4:+45792111 | Msa0165330:CDS |
CACTCCTGTAAAACAGAGAA+TGG | 0.505391 | 1_4:+45790341 | Msa0165330:CDS |
GTCTGGCTTCAGAACCCAAT+GGG | 0.505996 | 1_4:-45792215 | None:intergenic |
TATCCTTAGCTGCTCATAAG+TGG | 0.506805 | 1_4:-45789213 | None:intergenic |
TTGTAGCTGTTTGCAAGCTA+GGG | 0.507608 | 1_4:-45789321 | None:intergenic |
ACAGGAAGGTCAGGAGCTGC+TGG | 0.513164 | 1_4:+45791740 | Msa0165330:CDS |
GCTTTCAGAGTCTGTTCCAT+CGG | 0.513216 | 1_4:-45789081 | None:intergenic |
CTGTTTGACTATCAAAAGGT+TGG | 0.513640 | 1_4:+45788795 | Msa0165330:CDS |
AACTTCCGCCGAACAGATGA+TGG | 0.514665 | 1_4:-45791767 | None:intergenic |
TGAATAGAACTCAATCGCAT+TGG | 0.514688 | 1_4:-45786464 | None:intergenic |
TTTGCTATTGTTTAGCAACT+GGG | 0.515205 | 1_4:-45791807 | None:intergenic |
GAATCCTTCGACTGATATGC+AGG | 0.515387 | 1_4:+45790485 | Msa0165330:CDS |
AATGATGAAAATGAATGTAA+AGG | 0.516605 | 1_4:+45786814 | Msa0165330:CDS |
CTTGAGCCTGCGAAAAGGAA+TGG | 0.517716 | 1_4:-45787908 | None:intergenic |
CTTTAACATATTCTTGAACA+GGG | 0.520567 | 1_4:-45792158 | None:intergenic |
ACGTAGACTGAACATTAGAC+AGG | 0.520949 | 1_4:+45792321 | Msa0165330:three_prime_UTR |
GTCTCGGTTCCTACATGGAC+AGG | 0.521528 | 1_4:+45791722 | Msa0165330:CDS |
AAGGGTCAAATGGTTCCCAT+TGG | 0.522050 | 1_4:+45792200 | Msa0165330:CDS |
AACAGGACAGACAATAATGC+TGG | 0.522323 | 1_4:-45788946 | None:intergenic |
AGGGGATCTAACAAATTCAA+TGG | 0.524381 | 1_4:+45791851 | Msa0165330:CDS |
CTTCAAACTCCTCAACCTAT+CGG | 0.525226 | 1_4:-45787043 | None:intergenic |
GCAGTTCCTATAAGAGTTGG+CGG | 0.525434 | 1_4:+45789467 | Msa0165330:CDS |
CTGGTGCACCATCATCTGTT+CGG | 0.525881 | 1_4:+45791759 | Msa0165330:CDS |
AGAACAAACTGAGTGAGTTA+TGG | 0.526350 | 1_4:+45789381 | Msa0165330:CDS |
TCCGAATCATTACTTCAGGT+TGG | 0.526761 | 1_4:-45792042 | None:intergenic |
TTTGCAGTTCCTATAAGAGT+TGG | 0.530100 | 1_4:+45789464 | Msa0165330:CDS |
CAGTTTCTTCGACAATTGAA+AGG | 0.530212 | 1_4:+45786920 | Msa0165330:CDS |
TACAAGTATCCACAGCATAC+AGG | 0.532080 | 1_4:+45789510 | Msa0165330:CDS |
CTATAAGAAGATACTTGCTC+TGG | 0.532480 | 1_4:-45790012 | None:intergenic |
CAGAACCAAATAAAAGAAAG+AGG | 0.532856 | 1_4:-45792495 | None:intergenic |
TGGAATTATTGGTGATGAGA+TGG | 0.533546 | 1_4:+45788857 | Msa0165330:CDS |
GATAGACAACTGGGTGAAAG+TGG | 0.533829 | 1_4:+45788051 | Msa0165330:CDS |
CATATTTACCGGAGAATGGA+TGG | 0.535121 | 1_4:+45790315 | Msa0165330:CDS |
ACTCTGCATAAAGGGTCAAA+TGG | 0.535759 | 1_4:+45792190 | Msa0165330:CDS |
AAAGCGTCTCGGTTCCTACA+TGG | 0.536121 | 1_4:+45791717 | Msa0165330:CDS |
ACCGTCTTAAACCGCTTCGC+AGG | 0.536930 | 1_4:-45787219 | None:intergenic |
TCACCCAGACCTACTTGAAA+GGG | 0.538242 | 1_4:+45790125 | Msa0165330:CDS |
GAGCTTCAAATATGTTATCA+GGG | 0.541463 | 1_4:-45788773 | None:intergenic |
GGAATTATTGGTGATGAGAT+GGG | 0.542035 | 1_4:+45788858 | Msa0165330:CDS |
CCTACATGGACAGGAAGGTC+AGG | 0.542696 | 1_4:+45791731 | Msa0165330:CDS |
AATCACACGTGGAACTATAG+AGG | 0.543110 | 1_4:+45790927 | Msa0165330:CDS |
CAGTCGAAGGATTCCAATCA+GGG | 0.543818 | 1_4:-45790476 | None:intergenic |
ATGGTGGGTGCATCAAGCTT+CGG | 0.543998 | 1_4:-45787889 | None:intergenic |
ATCACCCAGACCTACTTGAA+AGG | 0.545263 | 1_4:+45790124 | Msa0165330:CDS |
ATTGAAAGGCCGAGAGATGT+TGG | 0.545336 | 1_4:+45786934 | Msa0165330:CDS |
AGCATCAGTTTGGTCAGTCA+AGG | 0.545645 | 1_4:+45791972 | Msa0165330:CDS |
AAGAATGCACAATTGCATAT+CGG | 0.545775 | 1_4:+45792415 | Msa0165330:three_prime_UTR |
TTGGACGAAGGGATTGATGA+GGG | 0.546446 | 1_4:+45786988 | Msa0165330:CDS |
GGTTTCTTGAGCCTGCGAAA+AGG | 0.547778 | 1_4:-45787913 | None:intergenic |
TTTCAATTCAATGGAAAACA+AGG | 0.547984 | 1_4:-45786439 | None:intergenic |
GAGGATCTTCAAGAGGAAAA+GGG | 0.548056 | 1_4:+45791235 | Msa0165330:CDS |
ATCTGATGAATCGCCAAGCA+GGG | 0.549700 | 1_4:+45791832 | Msa0165330:CDS |
GCAAATTCGGCTTCAAACAC+AGG | 0.553367 | 1_4:-45789446 | None:intergenic |
GAGCAGGTTGACAAAAGTAA+TGG | 0.553570 | 1_4:+45791261 | Msa0165330:CDS |
AGGCCTGTTCCCTTTCAAGT+AGG | 0.553607 | 1_4:-45790134 | None:intergenic |
TTACATCAGCCTTCATTCGT+CGG | 0.554250 | 1_4:-45789939 | None:intergenic |
CCCAGTTTCCCAGAGAGGAG+AGG | 0.554581 | 1_4:-45786406 | None:intergenic |
ACTCCTGCGACAATGGAAAA+GGG | 0.554706 | 1_4:+45788971 | Msa0165330:CDS |
CATGGCGAATTGGTCAGAAA+CGG | 0.555011 | 1_4:+45790884 | Msa0165330:CDS |
TCCATAATCTGGATTGCTGA+AGG | 0.555850 | 1_4:-45790154 | None:intergenic |
ACTCGACGAGGAAGCTTCCA+AGG | 0.555931 | 1_4:+45791640 | Msa0165330:CDS |
AATTCAATGGATATGCTGCT+GGG | 0.556091 | 1_4:+45791864 | Msa0165330:CDS |
CTGAAAAGTTTGTCGAAGGA+TGG | 0.557129 | 1_4:+45787093 | Msa0165330:CDS |
AATTTGTTAGATCCCCTGCT+TGG | 0.557154 | 1_4:-45791845 | None:intergenic |
AGAAGCGACCTGGGCCTGGT+AGG | 0.557357 | 1_4:+45788001 | Msa0165330:CDS |
AGGTTGGTGTTCAATGGATG+TGG | 0.558382 | 1_4:+45788811 | Msa0165330:CDS |
GCCCAACCTCCAAGCTGCTT+AGG | 0.559091 | 1_4:+45787854 | Msa0165330:CDS |
AAGAGGAAAAGGGAAAGAGC+AGG | 0.559903 | 1_4:+45791245 | Msa0165330:CDS |
GAGTGAGACCATCCATTCTC+CGG | 0.561533 | 1_4:-45790323 | None:intergenic |
TCTCATCTTCTCCTCATCAT+GGG | 0.561709 | 1_4:-45791618 | None:intergenic |
GAAGGGATTGATGAGGGTGG+TGG | 0.562537 | 1_4:+45786994 | Msa0165330:CDS |
GTTATGCAGTTCTTGATGAA+GGG | 0.564545 | 1_4:+45789267 | Msa0165330:CDS |
GGGCATCCATGATCAAATCA+TGG | 0.564800 | 1_4:-45791598 | None:intergenic |
ATCCTCAGAAGAAACACGCT+TGG | 0.568220 | 1_4:-45788031 | None:intergenic |
ACCAAACTGATGCTCAAGCC+CGG | 0.569314 | 1_4:-45791963 | None:intergenic |
TTTGGACGAAGGGATTGATG+AGG | 0.569741 | 1_4:+45786987 | Msa0165330:CDS |
CGATTCCCAGTTTCCCAGAG+AGG | 0.569781 | 1_4:-45786411 | None:intergenic |
TCACCACTTATGAGCAGCTA+AGG | 0.570969 | 1_4:+45789210 | Msa0165330:CDS |
CGTATGTAACATTAGAAGGT+GGG | 0.573715 | 1_4:+45788742 | Msa0165330:CDS |
TTGCTATTGTTTAGCAACTG+GGG | 0.574075 | 1_4:-45791806 | None:intergenic |
AGAAAATGCTAATGGTTGCT+TGG | 0.574593 | 1_4:+45788656 | Msa0165330:intron |
TCAAGTGCTTAACGTTTGGA+AGG | 0.576802 | 1_4:+45790212 | Msa0165330:CDS |
ACCTGCGAAGCGGTTTAAGA+CGG | 0.578536 | 1_4:+45787218 | Msa0165330:CDS |
ACTTGGGAATATGCTGCAAA+TGG | 0.580695 | 1_4:+45792460 | Msa0165330:three_prime_UTR |
GTACACCGCATAATAATGAC+TGG | 0.580968 | 1_4:+45789347 | Msa0165330:CDS |
GACCAAGCGTGTTTCTTCTG+AGG | 0.581932 | 1_4:+45788029 | Msa0165330:CDS |
AAATTACCTCATCGAAAATG+TGG | 0.582300 | 1_4:-45786651 | None:intergenic |
GATCAGCAGTAATGAGCAGT+TGG | 0.583533 | 1_4:-45792274 | None:intergenic |
TATAGTCAAACTGCTGAACT+GGG | 0.584648 | 1_4:+45791171 | Msa0165330:CDS |
AATTAACCCGTTAAAACACT+AGG | 0.585951 | 1_4:-45792352 | None:intergenic |
TCGTATGTAACATTAGAAGG+TGG | 0.588323 | 1_4:+45788741 | Msa0165330:CDS |
ATGCTTCAGGTTGTTGAATG+CGG | 0.589321 | 1_4:-45787732 | None:intergenic |
CCTGACCTTCCTGTCCATGT+AGG | 0.589406 | 1_4:-45791731 | None:intergenic |
AGCGTGTTCTTGCTGCCGAT+AGG | 0.590587 | 1_4:+45787028 | Msa0165330:CDS |
TCTGGCAGCTCTTTCAACAC+TGG | 0.592561 | 1_4:-45787806 | None:intergenic |
GAGTTGCACTGCCAAAGAGC+TGG | 0.593338 | 1_4:+45788834 | Msa0165330:CDS |
GAGAATGAGAATTTGGACGA+AGG | 0.594788 | 1_4:+45786976 | Msa0165330:CDS |
CATGAACCATGATTTGATCA+TGG | 0.595013 | 1_4:+45791592 | Msa0165330:CDS |
TCAAACCTAACTCAGTTCAA+AGG | 0.596481 | 1_4:+45786484 | Msa0165330:five_prime_UTR |
AGAGCTGAAAAGTTTGTCGA+AGG | 0.602184 | 1_4:+45787089 | Msa0165330:CDS |
TTGCACTGCCAAAGAGCTGG+TGG | 0.602944 | 1_4:+45788837 | Msa0165330:CDS |
TATTCCCAAGTACAAAATTG+TGG | 0.603353 | 1_4:-45792448 | None:intergenic |
AAACCTCTAGACGACAATGA+GGG | 0.603961 | 1_4:+45787949 | Msa0165330:CDS |
GAAATATTATCCAAAATTCG+AGG | 0.604404 | 1_4:+45791917 | Msa0165330:CDS |
AAGAAGCGAGCTGAATCCGA+TGG | 0.605323 | 1_4:+45789065 | Msa0165330:CDS |
ATGGAAATCCTGAACGCAGT+GGG | 0.608573 | 1_4:+45790172 | Msa0165330:CDS |
CAAGCTGCTTAGGCCTGAAG+AGG | 0.609805 | 1_4:+45787864 | Msa0165330:CDS |
GGTTGGTGTTCAATGGATGT+GGG | 0.611364 | 1_4:+45788812 | Msa0165330:CDS |
TTTAACATATTCTTGAACAG+GGG | 0.611810 | 1_4:-45792157 | None:intergenic |
TTTGCAAGCTAGGGTAACTT+CGG | 0.613149 | 1_4:-45789312 | None:intergenic |
GACGAAGGGATTGATGAGGG+TGG | 0.613569 | 1_4:+45786991 | Msa0165330:CDS |
CCCCTTCAACTTATGAAAAG+GGG | 0.614862 | 1_4:-45787701 | None:intergenic |
GAGGTGGAGGAAATATTGGA+TGG | 0.616095 | 1_4:+45790054 | Msa0165330:CDS |
TATAGGCTAGAGAGCGTGCA+TGG | 0.616653 | 1_4:+45790866 | Msa0165330:intron |
CAAACCTCTAGACGACAATG+AGG | 0.618130 | 1_4:+45787948 | Msa0165330:CDS |
CAGTTGCTTAACATTGAATG+GGG | 0.622112 | 1_4:+45789245 | Msa0165330:CDS |
CGGTTCCTACATGGACAGGA+AGG | 0.624331 | 1_4:+45791726 | Msa0165330:CDS |
TGAAGATGTAAATATTATTG+GGG | 0.625799 | 1_4:+45791119 | Msa0165330:CDS |
AACCTCTAGACGACAATGAG+GGG | 0.625943 | 1_4:+45787950 | Msa0165330:CDS |
TGTAGATGTTAGAACTTCCA+GGG | 0.627049 | 1_4:+45791997 | Msa0165330:CDS |
TGCTGATCACAGAAGTTTAG+GGG | 0.631452 | 1_4:+45792289 | Msa0165330:three_prime_UTR |
AATAAGTTATTGTTATACGG+TGG | 0.632266 | 1_4:-45786534 | None:intergenic |
ACTGGAATAAGCAAGATCGT+TGG | 0.633062 | 1_4:-45787788 | None:intergenic |
ATTCAATGGATATGCTGCTG+GGG | 0.634015 | 1_4:+45791865 | Msa0165330:CDS |
GTGGAGGAAATATTGGATGG+AGG | 0.634170 | 1_4:+45790057 | Msa0165330:CDS |
CGTAGACTGAACATTAGACA+GGG | 0.636338 | 1_4:+45792322 | Msa0165330:three_prime_UTR |
CTTAACGTTTGGAAGGAGCA+GGG | 0.637676 | 1_4:+45790219 | Msa0165330:CDS |
CCGAAATCATGAAAGCGTCT+CGG | 0.637713 | 1_4:+45791706 | Msa0165330:CDS |
CCGGTAAATATGTCCACAAG+TGG | 0.639715 | 1_4:-45790304 | None:intergenic |
AATGCACAATTGCATATCGG+TGG | 0.643487 | 1_4:+45792418 | Msa0165330:three_prime_UTR |
GTGCACCATCATCTGTTCGG+CGG | 0.643644 | 1_4:+45791762 | Msa0165330:CDS |
CATACCTGCATATCAGTCGA+AGG | 0.646492 | 1_4:-45790489 | None:intergenic |
TCACGCAGAGGATCTTCAAG+AGG | 0.646752 | 1_4:+45791228 | Msa0165330:CDS |
AGCCTGCGAAAAGGAATGGT+GGG | 0.646877 | 1_4:-45787904 | None:intergenic |
ACAGGACAGACAATAATGCT+GGG | 0.649130 | 1_4:-45788945 | None:intergenic |
TCTTCTGAGGATAGACAACT+GGG | 0.651485 | 1_4:+45788042 | Msa0165330:CDS |
TCTGATGAATCGCCAAGCAG+GGG | 0.655077 | 1_4:+45791833 | Msa0165330:CDS |
GAGCCTGCGAAAAGGAATGG+TGG | 0.658450 | 1_4:-45787905 | None:intergenic |
TGTTGTTTACAGGTGTGCGG+TGG | 0.660670 | 1_4:+45789885 | Msa0165330:intron |
GATCATGGATGCCCATGATG+AGG | 0.675175 | 1_4:+45791607 | Msa0165330:CDS |
TATGGAAATCCTGAACGCAG+TGG | 0.677894 | 1_4:+45790171 | Msa0165330:CDS |
TATGCTGTGGATACTTGTAA+CGG | 0.678107 | 1_4:-45789506 | None:intergenic |
ACCTCTAGACGACAATGAGG+GGG | 0.678752 | 1_4:+45787951 | Msa0165330:CDS |
GGTTCTGAAGATGATGCAGT+TGG | 0.679380 | 1_4:+45791192 | Msa0165330:CDS |
AGTTTCAACAAATCCAGCAG+AGG | 0.683684 | 1_4:-45787286 | None:intergenic |
TAAGTAAAAGACCTGCGAAG+CGG | 0.684215 | 1_4:+45787208 | Msa0165330:CDS |
ATATATAGGTTAATCACACG+TGG | 0.685916 | 1_4:+45790916 | Msa0165330:CDS |
AGTCTGGCTTCAGAACCCAA+TGG | 0.686733 | 1_4:-45792216 | None:intergenic |
AATCGTGTAAAAGTTCAACA+TGG | 0.693558 | 1_4:-45789019 | None:intergenic |
TGGTAAAAGTGAAGAATGTG+AGG | 0.696031 | 1_4:+45786954 | Msa0165330:CDS |
GTGCACCAGTCATTATTATG+CGG | 0.697429 | 1_4:-45789352 | None:intergenic |
ATTGGCCCACCTGTATGCTG+TGG | 0.700108 | 1_4:-45789519 | None:intergenic |
GAGGAGTTTGAAGAAAACGA+AGG | 0.701495 | 1_4:+45787053 | Msa0165330:CDS |
GCAGGTTGACAAAAGTAATG+GGG | 0.706921 | 1_4:+45791263 | Msa0165330:CDS |
GATGATGGCAAATCACGCAG+AGG | 0.722724 | 1_4:+45791216 | Msa0165330:CDS |
TGAATGTGGATGGAGAAACT+GGG | 0.737142 | 1_4:+45791061 | Msa0165330:CDS |
GGAGAAGATGAGACTCGACG+AGG | 0.747821 | 1_4:+45791628 | Msa0165330:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTTTAAATTATATAATAA+AGG | - | chr1_4:45788255-45788274 | None:intergenic | 0.0% |
!! | ATTAATAAGTTATTGTTATA+CGG | - | chr1_4:45786540-45786559 | None:intergenic | 10.0% |
!! | TCATATTATCAATAATATAT+TGG | + | chr1_4:45787544-45787563 | Msa0165330:intron | 10.0% |
!!! | TAATTAAATTTTATCTTTGA+AGG | - | chr1_4:45789696-45789715 | None:intergenic | 10.0% |
!! | ATTATCAATAATATATTGGA+TGG | + | chr1_4:45787548-45787567 | Msa0165330:intron | 15.0% |
!! | TAATAGAATATGAATAATTG+AGG | + | chr1_4:45788113-45788132 | Msa0165330:intron | 15.0% |
!!! | AAATATCTTTTGTTTGTTAT+CGG | + | chr1_4:45788289-45788308 | Msa0165330:intron | 15.0% |
!! | ATTACAATTTAGAAAATTCT+GGG | - | chr1_4:45789673-45789692 | None:intergenic | 15.0% |
!! | AATGTTATTAATTAGATTGT+TGG | + | chr1_4:45789793-45789812 | Msa0165330:intron | 15.0% |
!!! | AATATTATTTTGTTGTTTAC+AGG | + | chr1_4:45789875-45789894 | Msa0165330:intron | 15.0% |
!!! | TTTTGAAGAAGAAAAATTCA+AGG | + | chr1_4:45786343-45786362 | Msa0165330:five_prime_UTR | 20.0% |
!! | TTTGAAGAAGAAAAATTCAA+GGG | + | chr1_4:45786344-45786363 | Msa0165330:five_prime_UTR | 20.0% |
!! | AATGATGAAAATGAATGTAA+AGG | + | chr1_4:45786814-45786833 | Msa0165330:CDS | 20.0% |
!!! | AGTTATCTTTAGTTTAGTTA+AGG | + | chr1_4:45787143-45787162 | Msa0165330:CDS | 20.0% |
!! | GAATCAAATTTGAACTTTAA+AGG | + | chr1_4:45787588-45787607 | Msa0165330:intron | 20.0% |
!! | TTCTATATATAACTCCAATA+GGG | + | chr1_4:45788145-45788164 | Msa0165330:intron | 20.0% |
!!! | TGATTCTTTGTTTTTATTGT+TGG | + | chr1_4:45788347-45788366 | Msa0165330:intron | 20.0% |
!!! | CATTTTCTTGTATTTTTAGA+CGG | - | chr1_4:45789143-45789162 | None:intergenic | 20.0% |
!! | GTCTAAAAATACAAGAAAAT+GGG | + | chr1_4:45789142-45789161 | Msa0165330:CDS | 20.0% |
!! | AACCAAAATAAAAGAAACAT+TGG | - | chr1_4:45789540-45789559 | None:intergenic | 20.0% |
!! | TTACAATTTAGAAAATTCTG+GGG | - | chr1_4:45789672-45789691 | None:intergenic | 20.0% |
!! | GATTACAATTTAGAAAATTC+TGG | - | chr1_4:45789674-45789693 | None:intergenic | 20.0% |
!! | TTCAAATTATTTGGTATGTT+GGG | - | chr1_4:45789857-45789876 | None:intergenic | 20.0% |
!! | ATTCAAATTATTTGGTATGT+TGG | - | chr1_4:45789858-45789877 | None:intergenic | 20.0% |
!! | ATTGAATCTGAAAATTATCA+GGG | - | chr1_4:45790797-45790816 | None:intergenic | 20.0% |
!! | AATTGAATCTGAAAATTATC+AGG | - | chr1_4:45790798-45790817 | None:intergenic | 20.0% |
!! | TCTGAAGATGTAAATATTAT+TGG | + | chr1_4:45791117-45791136 | Msa0165330:CDS | 20.0% |
!! | CTGAAGATGTAAATATTATT+GGG | + | chr1_4:45791118-45791137 | Msa0165330:CDS | 20.0% |
!! | TGAAGATGTAAATATTATTG+GGG | + | chr1_4:45791119-45791138 | Msa0165330:CDS | 20.0% |
!!! | CTTTTATTTGAGCATATTAT+TGG | + | chr1_4:45791391-45791410 | Msa0165330:intron | 20.0% |
!! | CTATATTAGATTGTACATAT+TGG | + | chr1_4:45791490-45791509 | Msa0165330:intron | 20.0% |
!!! | TATACTGATTAAGTTTTTGT+TGG | + | chr1_4:45792380-45792399 | Msa0165330:three_prime_UTR | 20.0% |
!!! | ATACTGATTAAGTTTTTGTT+GGG | + | chr1_4:45792381-45792400 | Msa0165330:three_prime_UTR | 20.0% |
! | TTTCAATTCAATGGAAAACA+AGG | - | chr1_4:45786442-45786461 | None:intergenic | 25.0% |
! | AATAAGTTATTGTTATACGG+TGG | - | chr1_4:45786537-45786556 | None:intergenic | 25.0% |
! | ATCATTATTCCCTTTATCTT+CGG | - | chr1_4:45786800-45786819 | None:intergenic | 25.0% |
!! | AGAGCAATAGAATTTGAAAT+TGG | + | chr1_4:45786895-45786914 | Msa0165330:CDS | 25.0% |
!! | TGTTTGTAGTTTGTACAATA+AGG | + | chr1_4:45787351-45787370 | Msa0165330:intron | 25.0% |
!! | TGAACTTTAAAGGATATAGT+TGG | + | chr1_4:45787598-45787617 | Msa0165330:intron | 25.0% |
!!! | ATTTTCGTTGTTTGTTTTTC+AGG | + | chr1_4:45787645-45787664 | Msa0165330:intron | 25.0% |
! | ATCTGAATACAGATTCAAAA+AGG | + | chr1_4:45787974-45787993 | Msa0165330:CDS | 25.0% |
!! | TGTCATGTTCTTATTTATCT+AGG | + | chr1_4:45788076-45788095 | Msa0165330:intron | 25.0% |
! | AATATGAATAATTGAGGTAG+TGG | + | chr1_4:45788119-45788138 | Msa0165330:intron | 25.0% |
! | ATATGAATAATTGAGGTAGT+GGG | + | chr1_4:45788120-45788139 | Msa0165330:intron | 25.0% |
! | GTTCTATATATAACTCCAAT+AGG | + | chr1_4:45788144-45788163 | Msa0165330:intron | 25.0% |
! | TCTATATATAACTCCAATAG+GGG | + | chr1_4:45788146-45788165 | Msa0165330:intron | 25.0% |
! | ACAAAGAATCATTACAAAAG+AGG | - | chr1_4:45788338-45788357 | None:intergenic | 25.0% |
! | ATCTTTCAATTCATCATCAT+TGG | - | chr1_4:45788461-45788480 | None:intergenic | 25.0% |
! | TTTATTGCAGAAAATGCTAA+TGG | + | chr1_4:45788648-45788667 | Msa0165330:intron | 25.0% |
!! | TATACAAGTATTGTCATTTC+TGG | + | chr1_4:45788893-45788912 | Msa0165330:CDS | 25.0% |
!! | ATACAAGTATTGTCATTTCT+GGG | + | chr1_4:45788894-45788913 | Msa0165330:CDS | 25.0% |
! | AAAAGTTCAACATGGAATTT+AGG | - | chr1_4:45789014-45789033 | None:intergenic | 25.0% |
! | CGTCTAAAAATACAAGAAAA+TGG | + | chr1_4:45789141-45789160 | Msa0165330:CDS | 25.0% |
!!! | TTTTATTTTGGTTTCGATGA+GGG | + | chr1_4:45789547-45789566 | Msa0165330:intron | 25.0% |
! | GTAGATTAAAAAAATCAGCT+TGG | + | chr1_4:45789569-45789588 | Msa0165330:intron | 25.0% |
! | AGTCTTTATTACTCATAAAC+TGG | + | chr1_4:45789638-45789657 | Msa0165330:intron | 25.0% |
! | ATTGTTGGCATATTTCATAT+AGG | + | chr1_4:45789808-45789827 | Msa0165330:intron | 25.0% |
! | TTGTTGGCATATTTCATATA+GGG | + | chr1_4:45789809-45789828 | Msa0165330:intron | 25.0% |
! | TCAAATTATTTGGTATGTTG+GGG | - | chr1_4:45789856-45789875 | None:intergenic | 25.0% |
!!! | ATCTTCTTATAGAGCATTTT+TGG | + | chr1_4:45790023-45790042 | Msa0165330:CDS | 25.0% |
! | TTTGAGTAAAAAGAAGAACA+CGG | - | chr1_4:45790248-45790267 | None:intergenic | 25.0% |
! | AAAAATGTCAAGCATTTGTT+GGG | - | chr1_4:45790271-45790290 | None:intergenic | 25.0% |
! | AATGAAAACAAAAATCTCAC+TGG | - | chr1_4:45790391-45790410 | None:intergenic | 25.0% |
!!! | TTCATTTTAACAACCAAAGT+TGG | + | chr1_4:45790405-45790424 | Msa0165330:CDS | 25.0% |
!!! | TCATTTTAACAACCAAAGTT+GGG | + | chr1_4:45790406-45790425 | Msa0165330:CDS | 25.0% |
! | TATGTTTGTATCTAACATGT+CGG | + | chr1_4:45790508-45790527 | Msa0165330:intron | 25.0% |
! | AAGTAGTTGAAATTGAAACA+TGG | + | chr1_4:45790541-45790560 | Msa0165330:intron | 25.0% |
! | ATGGAAAAACAGTGAATAAA+AGG | - | chr1_4:45790574-45790593 | None:intergenic | 25.0% |
!!! | TGTCTGGATGTTTTTTTAAA+GGG | + | chr1_4:45790611-45790630 | Msa0165330:intron | 25.0% |
! | TGTATTTAGATTGATGGAAA+AGG | - | chr1_4:45790758-45790777 | None:intergenic | 25.0% |
! | TTAGAGTGTATTTAGATTGA+TGG | - | chr1_4:45790764-45790783 | None:intergenic | 25.0% |
! | TTGAATCTGAAAATTATCAG+GGG | - | chr1_4:45790796-45790815 | None:intergenic | 25.0% |
!! | AAAAGTCTTTTTGATGCTAA+TGG | + | chr1_4:45791309-45791328 | Msa0165330:CDS | 25.0% |
!! | AAAGTCTTTTTGATGCTAAT+GGG | + | chr1_4:45791310-45791329 | Msa0165330:CDS | 25.0% |
! | TCTAATATAGTCTGAATATG+TGG | - | chr1_4:45791480-45791499 | None:intergenic | 25.0% |
! | TCATATAACAAGTTTATCAG+AGG | - | chr1_4:45791561-45791580 | None:intergenic | 25.0% |
! | GAAATATTATCCAAAATTCG+AGG | + | chr1_4:45791917-45791936 | Msa0165330:CDS | 25.0% |
! | TTTAACATATTCTTGAACAG+GGG | - | chr1_4:45792160-45792179 | None:intergenic | 25.0% |
! | CTTTAACATATTCTTGAACA+GGG | - | chr1_4:45792161-45792180 | None:intergenic | 25.0% |
!! | ATTAAGTTTTTGTTGGGATA+TGG | + | chr1_4:45792387-45792406 | Msa0165330:three_prime_UTR | 25.0% |
!! | TTAAGTTTTTGTTGGGATAT+GGG | + | chr1_4:45792388-45792407 | Msa0165330:three_prime_UTR | 25.0% |
!! | TAAAGCCTCTTTCTTTTATT+TGG | + | chr1_4:45792490-45792509 | Msa0165330:three_prime_UTR | 25.0% |
! | GCATTGGATTTTCAATTCAA+TGG | - | chr1_4:45786451-45786470 | None:intergenic | 30.0% |
ATGTGACGAAAACAATTCAA+TGG | + | chr1_4:45786558-45786577 | Msa0165330:exon | 30.0% | |
AAATTACCTCATCGAAAATG+TGG | - | chr1_4:45786654-45786673 | None:intergenic | 30.0% | |
!!! | ATGACTGTGTTGATTTTTGT+AGG | + | chr1_4:45786750-45786769 | Msa0165330:intron | 30.0% |
TCATCTATAAGCTTCTTCTT+CGG | - | chr1_4:45787180-45787199 | None:intergenic | 30.0% | |
GAAGATACAAGTTAAATGCA+CGG | - | chr1_4:45787434-45787453 | None:intergenic | 30.0% | |
! | ACTTTAAAGGATATAGTTGG+TGG | + | chr1_4:45787601-45787620 | Msa0165330:intron | 30.0% |
!!! | GTTGTTTGTTTTTCAGGAAA+GGG | + | chr1_4:45787651-45787670 | Msa0165330:intron | 30.0% |
TTTATGAGTAGTATGCAAGT+CGG | + | chr1_4:45788417-45788436 | Msa0165330:intron | 30.0% | |
TTCTTCTAAACTTTCACAAC+TGG | - | chr1_4:45788688-45788707 | None:intergenic | 30.0% | |
TCTTCGTATGTAACATTAGA+AGG | + | chr1_4:45788738-45788757 | Msa0165330:CDS | 30.0% | |
GAGCTTCAAATATGTTATCA+GGG | - | chr1_4:45788776-45788795 | None:intergenic | 30.0% | |
AGAGCTTCAAATATGTTATC+AGG | - | chr1_4:45788777-45788796 | None:intergenic | 30.0% | |
AATCGTGTAAAAGTTCAACA+TGG | - | chr1_4:45789022-45789041 | None:intergenic | 30.0% | |
TCTCATGACACGATTTATTA+GGG | - | chr1_4:45789171-45789190 | None:intergenic | 30.0% | |
ATCTCATGACACGATTTATT+AGG | - | chr1_4:45789172-45789191 | None:intergenic | 30.0% | |
! | TTGATGAAGGGCATAAAATT+AGG | + | chr1_4:45789279-45789298 | Msa0165330:CDS | 30.0% |
!!! | TTTTGTTTTCCCTGGAAAAT+TGG | + | chr1_4:45789415-45789434 | Msa0165330:CDS | 30.0% |
!! | TTTGTTTTCCCTGGAAAATT+GGG | + | chr1_4:45789416-45789435 | Msa0165330:CDS | 30.0% |
TCTTATAGGAACTGCAAATT+CGG | - | chr1_4:45789462-45789481 | None:intergenic | 30.0% | |
!! | GGCCAATGTTTCTTTTATTT+TGG | + | chr1_4:45789535-45789554 | Msa0165330:intron | 30.0% |
!!! | CTTTTATTTTGGTTTCGATG+AGG | + | chr1_4:45789546-45789565 | Msa0165330:intron | 30.0% |
! | TTTGATAACTTCATCTTTCC+TGG | - | chr1_4:45789762-45789781 | None:intergenic | 30.0% |
AAATTATTTGGTATGTTGGG+GGG | - | chr1_4:45789854-45789873 | None:intergenic | 30.0% | |
CAAATTATTTGGTATGTTGG+GGG | - | chr1_4:45789855-45789874 | None:intergenic | 30.0% | |
CAAAAATGTCAAGCATTTGT+TGG | - | chr1_4:45790272-45790291 | None:intergenic | 30.0% | |
!! | AAAACAGAGAATGGCTTTAA+TGG | + | chr1_4:45790350-45790369 | Msa0165330:CDS | 30.0% |
!! | CATTTTAACAACCAAAGTTG+GGG | + | chr1_4:45790407-45790426 | Msa0165330:CDS | 30.0% |
!! | ATTTTAACAACCAAAGTTGG+GGG | + | chr1_4:45790408-45790427 | Msa0165330:CDS | 30.0% |
!!! | GTGTCTGGATGTTTTTTTAA+AGG | + | chr1_4:45790610-45790629 | Msa0165330:intron | 30.0% |
!!! | GTCTGGATGTTTTTTTAAAG+GGG | + | chr1_4:45790612-45790631 | Msa0165330:intron | 30.0% |
!!! | TCTGGATGTTTTTTTAAAGG+GGG | + | chr1_4:45790613-45790632 | Msa0165330:intron | 30.0% |
AAAAGGAAAGAAACTGAATG+AGG | - | chr1_4:45790741-45790760 | None:intergenic | 30.0% | |
TTGTATCAACTTGATTCTCA+TGG | + | chr1_4:45790831-45790850 | Msa0165330:intron | 30.0% | |
CATGGAGACTAATGTTATAT+AGG | + | chr1_4:45790849-45790868 | Msa0165330:intron | 30.0% | |
AACGGGATGTAACTATATAT+AGG | + | chr1_4:45790902-45790921 | Msa0165330:CDS | 30.0% | |
ATATATAGGTTAATCACACG+TGG | + | chr1_4:45790916-45790935 | Msa0165330:CDS | 30.0% | |
AAAAAGATCCTTCATATCTC+GGG | - | chr1_4:45791037-45791056 | None:intergenic | 30.0% | |
CAAAAAGATCCTTCATATCT+CGG | - | chr1_4:45791038-45791057 | None:intergenic | 30.0% | |
!!! | GGATCTTTTTGTTTTGAATG+TGG | + | chr1_4:45791047-45791066 | Msa0165330:CDS | 30.0% |
!!! | CTTTTTGTTTTGAATGTGGA+TGG | + | chr1_4:45791051-45791070 | Msa0165330:CDS | 30.0% |
!! | TTGAAAAAGGGAGTACTAAA+AGG | - | chr1_4:45791527-45791546 | None:intergenic | 30.0% |
GAAACCAGTACATTGAAAAA+GGG | - | chr1_4:45791539-45791558 | None:intergenic | 30.0% | |
!! | TTTGCTATTGTTTAGCAACT+GGG | - | chr1_4:45791810-45791829 | None:intergenic | 30.0% |
! | TTCTTGATTACCTCGAATTT+TGG | - | chr1_4:45791930-45791949 | None:intergenic | 30.0% |
! | ATTTTCCGAATCATTACTTC+AGG | - | chr1_4:45792049-45792068 | None:intergenic | 30.0% |
CCTTTAACATATTCTTGAAC+AGG | - | chr1_4:45792162-45792181 | None:intergenic | 30.0% | |
CCTGTTCAAGAATATGTTAA+AGG | + | chr1_4:45792159-45792178 | Msa0165330:CDS | 30.0% | |
! | ACATACTATACTTGATAGTC+TGG | - | chr1_4:45792235-45792254 | None:intergenic | 30.0% |
!! | AAGCTTTCCTAGTGTTTTAA+CGG | + | chr1_4:45792345-45792364 | Msa0165330:three_prime_UTR | 30.0% |
AATTAACCCGTTAAAACACT+AGG | - | chr1_4:45792355-45792374 | None:intergenic | 30.0% | |
AAGAATGCACAATTGCATAT+CGG | + | chr1_4:45792415-45792434 | Msa0165330:three_prime_UTR | 30.0% | |
TATTCCCAAGTACAAAATTG+TGG | - | chr1_4:45792451-45792470 | None:intergenic | 30.0% | |
CAGAACCAAATAAAAGAAAG+AGG | - | chr1_4:45792498-45792517 | None:intergenic | 30.0% | |
!! | CTCTTTCTTTTATTTGGTTC+TGG | + | chr1_4:45792496-45792515 | Msa0165330:three_prime_UTR | 30.0% |
!!! | TCTTTTATTTGGTTCTGGTA+TGG | + | chr1_4:45792501-45792520 | Msa0165330:three_prime_UTR | 30.0% |
!!! | CTTTTATTTGGTTCTGGTAT+GGG | + | chr1_4:45792502-45792521 | Msa0165330:three_prime_UTR | 30.0% |
TGAATAGAACTCAATCGCAT+TGG | - | chr1_4:45786467-45786486 | None:intergenic | 35.0% | |
TCAAACCTAACTCAGTTCAA+AGG | + | chr1_4:45786484-45786503 | Msa0165330:five_prime_UTR | 35.0% | |
TCTTTCCTTTGAACTGAGTT+AGG | - | chr1_4:45786492-45786511 | None:intergenic | 35.0% | |
AACTCAGTTCAAAGGAAAGA+AGG | + | chr1_4:45786492-45786511 | Msa0165330:five_prime_UTR | 35.0% | |
CAATTCAATGGAAGAAGAAC+AGG | + | chr1_4:45786570-45786589 | Msa0165330:exon | 35.0% | |
CGAATTCTGCTTTCTACTTT+AGG | + | chr1_4:45786595-45786614 | Msa0165330:CDS | 35.0% | |
!!! | TGTGTTGATTTTTGTAGGCT+AGG | + | chr1_4:45786755-45786774 | Msa0165330:intron | 35.0% |
TTTGTAGGCTAGGAATGATT+CGG | + | chr1_4:45786765-45786784 | Msa0165330:intron | 35.0% | |
TTGCAGTTACCGAAGATAAA+GGG | + | chr1_4:45786788-45786807 | Msa0165330:CDS | 35.0% | |
!! | TCAGCTTTAGCTTTCGATAA+CGG | - | chr1_4:45786859-45786878 | None:intergenic | 35.0% |
CAGTTTCTTCGACAATTGAA+AGG | + | chr1_4:45786920-45786939 | Msa0165330:CDS | 35.0% | |
!! | TCACTTTTACCAACATCTCT+CGG | - | chr1_4:45786946-45786965 | None:intergenic | 35.0% |
TGGTAAAAGTGAAGAATGTG+AGG | + | chr1_4:45786954-45786973 | Msa0165330:CDS | 35.0% | |
ATGTGAGGAGAATGAGAATT+TGG | + | chr1_4:45786969-45786988 | Msa0165330:CDS | 35.0% | |
AGAATGAGAATTTGGACGAA+GGG | + | chr1_4:45786977-45786996 | Msa0165330:CDS | 35.0% | |
!! | TGGTTGGTTGTGAATTTTGA+TGG | + | chr1_4:45787474-45787493 | Msa0165330:intron | 35.0% |
!!! | CGTTGTTTGTTTTTCAGGAA+AGG | + | chr1_4:45787650-45787669 | Msa0165330:intron | 35.0% |
!! | TTTTCAGGAAAGGGATGAAT+TGG | + | chr1_4:45787660-45787679 | Msa0165330:intron | 35.0% |
AGGGATGAATTGGTTAGAAA+AGG | + | chr1_4:45787670-45787689 | Msa0165330:CDS | 35.0% | |
!! | ACCCCTTTTCATAAGTTGAA+GGG | + | chr1_4:45787700-45787719 | Msa0165330:CDS | 35.0% |
ACCCCTTCAACTTATGAAAA+GGG | - | chr1_4:45787705-45787724 | None:intergenic | 35.0% | |
AACCCCTTCAACTTATGAAA+AGG | - | chr1_4:45787706-45787725 | None:intergenic | 35.0% | |
CTCCAATAGGGGTAATAAAT+TGG | + | chr1_4:45788157-45788176 | Msa0165330:intron | 35.0% | |
TGCCAATTTATTACCCCTAT+TGG | - | chr1_4:45788162-45788181 | None:intergenic | 35.0% | |
TAATAAATTGGCAGTCCTGA+TGG | + | chr1_4:45788169-45788188 | Msa0165330:intron | 35.0% | |
AAGAATCCAGATATACCATC+AGG | - | chr1_4:45788187-45788206 | None:intergenic | 35.0% | |
GGTATATCTGGATTCTTAAG+AGG | + | chr1_4:45788190-45788209 | Msa0165330:intron | 35.0% | |
! | GTTATCGGTGTTTGTTTATC+TGG | + | chr1_4:45788304-45788323 | Msa0165330:intron | 35.0% |
AGAAAATGCTAATGGTTGCT+TGG | + | chr1_4:45788656-45788675 | Msa0165330:intron | 35.0% | |
TCGTATGTAACATTAGAAGG+TGG | + | chr1_4:45788741-45788760 | Msa0165330:CDS | 35.0% | |
CGTATGTAACATTAGAAGGT+GGG | + | chr1_4:45788742-45788761 | Msa0165330:CDS | 35.0% | |
AGCTCTGTTTGACTATCAAA+AGG | + | chr1_4:45788791-45788810 | Msa0165330:CDS | 35.0% | |
CTGTTTGACTATCAAAAGGT+TGG | + | chr1_4:45788795-45788814 | Msa0165330:CDS | 35.0% | |
!! | ATCAAAAGGTTGGTGTTCAA+TGG | + | chr1_4:45788805-45788824 | Msa0165330:CDS | 35.0% |
!! | TGGAATTATTGGTGATGAGA+TGG | + | chr1_4:45788857-45788876 | Msa0165330:CDS | 35.0% |
!! | GGAATTATTGGTGATGAGAT+GGG | + | chr1_4:45788858-45788877 | Msa0165330:CDS | 35.0% |
TTATGAGCAGCTAAGGATAT+TGG | + | chr1_4:45789217-45789236 | Msa0165330:CDS | 35.0% | |
TATGAGCAGCTAAGGATATT+GGG | + | chr1_4:45789218-45789237 | Msa0165330:CDS | 35.0% | |
ACCAGTTGCTTAACATTGAA+TGG | + | chr1_4:45789243-45789262 | Msa0165330:CDS | 35.0% | |
CCAGTTGCTTAACATTGAAT+GGG | + | chr1_4:45789244-45789263 | Msa0165330:CDS | 35.0% | |
CAGTTGCTTAACATTGAATG+GGG | + | chr1_4:45789245-45789264 | Msa0165330:CDS | 35.0% | |
GTTATGCAGTTCTTGATGAA+GGG | + | chr1_4:45789267-45789286 | Msa0165330:CDS | 35.0% | |
! | TCACTCAGTTTGTTCTGAAT+AGG | - | chr1_4:45789377-45789396 | None:intergenic | 35.0% |
AGAACAAACTGAGTGAGTTA+TGG | + | chr1_4:45789381-45789400 | Msa0165330:CDS | 35.0% | |
!!! | TTGTTCGATTTTGTTTTCCC+TGG | + | chr1_4:45789407-45789426 | Msa0165330:CDS | 35.0% |
TTTGCAGTTCCTATAAGAGT+TGG | + | chr1_4:45789464-45789483 | Msa0165330:CDS | 35.0% | |
TATGCTGTGGATACTTGTAA+CGG | - | chr1_4:45789509-45789528 | None:intergenic | 35.0% | |
!!! | TTTTGTTGTTTACAGGTGTG+CGG | + | chr1_4:45789882-45789901 | Msa0165330:intron | 35.0% |
CTATAAGAAGATACTTGCTC+TGG | - | chr1_4:45790015-45790034 | None:intergenic | 35.0% | |
GAGAAATATTTGACCACTTG+TGG | + | chr1_4:45790291-45790310 | Msa0165330:CDS | 35.0% | |
! | AAAGCCATTCTCTGTTTTAC+AGG | - | chr1_4:45790348-45790367 | None:intergenic | 35.0% |
GAAAACAAAAATCTCACTGG+AGG | - | chr1_4:45790388-45790407 | None:intergenic | 35.0% | |
! | TTTTAACAACCAAAGTTGGG+GGG | + | chr1_4:45790409-45790428 | Msa0165330:CDS | 35.0% |
TTAAAGGGGGAAACGAAAAA+TGG | + | chr1_4:45790626-45790645 | Msa0165330:intron | 35.0% | |
TAAAGGGGGAAACGAAAAAT+GGG | + | chr1_4:45790627-45790646 | Msa0165330:intron | 35.0% | |
AAACGAAAAATGGGGAAAAC+CGG | + | chr1_4:45790636-45790655 | Msa0165330:intron | 35.0% | |
GAAACTGAATGAGGTGATAA+AGG | - | chr1_4:45790732-45790751 | None:intergenic | 35.0% | |
! | TAAAGAACCTTTTCTGCTGT+GGG | - | chr1_4:45791011-45791030 | None:intergenic | 35.0% |
! | TTAAAGAACCTTTTCTGCTG+TGG | - | chr1_4:45791012-45791031 | None:intergenic | 35.0% |
ACAGCAGAAAAGGTTCTTTA+AGG | + | chr1_4:45791011-45791030 | Msa0165330:CDS | 35.0% | |
ATATAGTCAAACTGCTGAAC+TGG | + | chr1_4:45791170-45791189 | Msa0165330:CDS | 35.0% | |
TATAGTCAAACTGCTGAACT+GGG | + | chr1_4:45791171-45791190 | Msa0165330:CDS | 35.0% | |
! | AGCAGGTTGACAAAAGTAAT+GGG | + | chr1_4:45791262-45791281 | Msa0165330:CDS | 35.0% |
ATGCACGATAATTTAGATGC+AGG | - | chr1_4:45791366-45791385 | None:intergenic | 35.0% | |
!!! | TACTCCCTTTTTCAATGTAC+TGG | + | chr1_4:45791532-45791551 | Msa0165330:intron | 35.0% |
GGAAACCAGTACATTGAAAA+AGG | - | chr1_4:45791540-45791559 | None:intergenic | 35.0% | |
CATGATCAAATCATGGTTCA+TGG | - | chr1_4:45791594-45791613 | None:intergenic | 35.0% | |
CATGAACCATGATTTGATCA+TGG | + | chr1_4:45791592-45791611 | Msa0165330:CDS | 35.0% | |
! | TTGCTATTGTTTAGCAACTG+GGG | - | chr1_4:45791809-45791828 | None:intergenic | 35.0% |
!! | CTTTGCTATTGTTTAGCAAC+TGG | - | chr1_4:45791811-45791830 | None:intergenic | 35.0% |
AGGGGATCTAACAAATTCAA+TGG | + | chr1_4:45791851-45791870 | Msa0165330:CDS | 35.0% | |
AAATTCAATGGATATGCTGC+TGG | + | chr1_4:45791863-45791882 | Msa0165330:CDS | 35.0% | |
AATTCAATGGATATGCTGCT+GGG | + | chr1_4:45791864-45791883 | Msa0165330:CDS | 35.0% | |
TGTAGATGTTAGAACTTCCA+GGG | + | chr1_4:45791997-45792016 | Msa0165330:CDS | 35.0% | |
TCCAACCTGAAGTAATGATT+CGG | + | chr1_4:45792041-45792060 | Msa0165330:CDS | 35.0% | |
! | TGTACCTTTTTCCAACAGAA+AGG | + | chr1_4:45792070-45792089 | Msa0165330:CDS | 35.0% |
AAATAGCGACTCTGCATAAA+GGG | + | chr1_4:45792182-45792201 | Msa0165330:CDS | 35.0% | |
!!! | AGCTTTCCTAGTGTTTTAAC+GGG | + | chr1_4:45792346-45792365 | Msa0165330:three_prime_UTR | 35.0% |
! | TCTTGCCACAATTTTGTACT+TGG | + | chr1_4:45792443-45792462 | Msa0165330:three_prime_UTR | 35.0% |
! | CTTGCCACAATTTTGTACTT+GGG | + | chr1_4:45792444-45792463 | Msa0165330:three_prime_UTR | 35.0% |
GTTGCAGTTACCGAAGATAA+AGG | + | chr1_4:45786787-45786806 | Msa0165330:CDS | 40.0% | |
GAGAATGAGAATTTGGACGA+AGG | + | chr1_4:45786976-45786995 | Msa0165330:CDS | 40.0% | |
CTTCAAACTCCTCAACCTAT+CGG | - | chr1_4:45787046-45787065 | None:intergenic | 40.0% | |
GAGGAGTTTGAAGAAAACGA+AGG | + | chr1_4:45787053-45787072 | Msa0165330:CDS | 40.0% | |
GAAGAAAACGAAGGCTCAAT+TGG | + | chr1_4:45787062-45787081 | Msa0165330:CDS | 40.0% | |
AGAGCTGAAAAGTTTGTCGA+AGG | + | chr1_4:45787089-45787108 | Msa0165330:CDS | 40.0% | |
CTGAAAAGTTTGTCGAAGGA+TGG | + | chr1_4:45787093-45787112 | Msa0165330:CDS | 40.0% | |
TAAGTAAAAGACCTGCGAAG+CGG | + | chr1_4:45787208-45787227 | Msa0165330:CDS | 40.0% | |
AGTTTCAACAAATCCAGCAG+AGG | - | chr1_4:45787289-45787308 | None:intergenic | 40.0% | |
AAATTCACAACCAACCACGT+GGG | - | chr1_4:45787471-45787490 | None:intergenic | 40.0% | |
AAAATTCACAACCAACCACG+TGG | - | chr1_4:45787472-45787491 | None:intergenic | 40.0% | |
!! | CACCCCTTTTCATAAGTTGA+AGG | + | chr1_4:45787699-45787718 | Msa0165330:CDS | 40.0% |
CCCCTTCAACTTATGAAAAG+GGG | - | chr1_4:45787704-45787723 | None:intergenic | 40.0% | |
!! | CCCCTTTTCATAAGTTGAAG+GGG | + | chr1_4:45787701-45787720 | Msa0165330:CDS | 40.0% |
!! | ATGCTTCAGGTTGTTGAATG+CGG | - | chr1_4:45787735-45787754 | None:intergenic | 40.0% |
! | TTACGACTAGTTGATGCTTC+AGG | - | chr1_4:45787748-45787767 | None:intergenic | 40.0% |
ACTGGAATAAGCAAGATCGT+TGG | - | chr1_4:45787791-45787810 | None:intergenic | 40.0% | |
AGAGGTTTGGGTAATTGCAT+TGG | - | chr1_4:45787937-45787956 | None:intergenic | 40.0% | |
TCATTGTCGTCTAGAGGTTT+GGG | - | chr1_4:45787949-45787968 | None:intergenic | 40.0% | |
AAACCTCTAGACGACAATGA+GGG | + | chr1_4:45787949-45787968 | Msa0165330:CDS | 40.0% | |
AAAAGGAAAAAGAAGCGACC+TGG | + | chr1_4:45787991-45788010 | Msa0165330:CDS | 40.0% | |
AAAGGAAAAAGAAGCGACCT+GGG | + | chr1_4:45787992-45788011 | Msa0165330:CDS | 40.0% | |
! | TTCTTCTGAGGATAGACAAC+TGG | + | chr1_4:45788041-45788060 | Msa0165330:CDS | 40.0% |
! | TCTTCTGAGGATAGACAACT+GGG | + | chr1_4:45788042-45788061 | Msa0165330:CDS | 40.0% |
TACAGCAAGCAAAGTAGTCT+GGG | - | chr1_4:45788563-45788582 | None:intergenic | 40.0% | |
CAATAATTCCACCAGCTCTT+TGG | - | chr1_4:45788848-45788867 | None:intergenic | 40.0% | |
CAAAGAGCTGGTGGAATTAT+TGG | + | chr1_4:45788846-45788865 | Msa0165330:CDS | 40.0% | |
ACAGGACAGACAATAATGCT+GGG | - | chr1_4:45788948-45788967 | None:intergenic | 40.0% | |
AACAGGACAGACAATAATGC+TGG | - | chr1_4:45788949-45788968 | None:intergenic | 40.0% | |
GGAAAAGGGAAGCTAAAAAG+TGG | + | chr1_4:45788985-45789004 | Msa0165330:CDS | 40.0% | |
! | ACTTTTACACGATTCTGCTC+AGG | + | chr1_4:45789028-45789047 | Msa0165330:CDS | 40.0% |
TATCCTTAGCTGCTCATAAG+TGG | - | chr1_4:45789216-45789235 | None:intergenic | 40.0% | |
CCCATTCAATGTTAAGCAAC+TGG | - | chr1_4:45789247-45789266 | None:intergenic | 40.0% | |
GGTTATGCAGTTCTTGATGA+AGG | + | chr1_4:45789266-45789285 | Msa0165330:CDS | 40.0% | |
TTTGCAAGCTAGGGTAACTT+CGG | - | chr1_4:45789315-45789334 | None:intergenic | 40.0% | |
TTGTAGCTGTTTGCAAGCTA+GGG | - | chr1_4:45789324-45789343 | None:intergenic | 40.0% | |
TTTGTAGCTGTTTGCAAGCT+AGG | - | chr1_4:45789325-45789344 | None:intergenic | 40.0% | |
GTACACCGCATAATAATGAC+TGG | + | chr1_4:45789347-45789366 | Msa0165330:CDS | 40.0% | |
GTGCACCAGTCATTATTATG+CGG | - | chr1_4:45789355-45789374 | None:intergenic | 40.0% | |
! | GCAAAACACCCAATTTTCCA+GGG | - | chr1_4:45789427-45789446 | None:intergenic | 40.0% |
GAATATCCGCCAACTCTTAT+AGG | - | chr1_4:45789476-45789495 | None:intergenic | 40.0% | |
TACAAGTATCCACAGCATAC+AGG | + | chr1_4:45789510-45789529 | Msa0165330:CDS | 40.0% | |
! | GCTTGGCCACATTTGAAATT+AGG | + | chr1_4:45789586-45789605 | Msa0165330:intron | 40.0% |
CTAGCGCCTAATTTCAAATG+TGG | - | chr1_4:45789595-45789614 | None:intergenic | 40.0% | |
CATTCACCTATTGAGATCCT+AGG | + | chr1_4:45789732-45789751 | Msa0165330:intron | 40.0% | |
TTCATTCGTCGGAGAAGATA+AGG | - | chr1_4:45789931-45789950 | None:intergenic | 40.0% | |
TTATCTTCTCCGACGAATGA+AGG | + | chr1_4:45789930-45789949 | Msa0165330:CDS | 40.0% | |
TTACATCAGCCTTCATTCGT+CGG | - | chr1_4:45789942-45789961 | None:intergenic | 40.0% | |
! | AGAACGTGCTCAGTTTTCTT+TGG | - | chr1_4:45789976-45789995 | None:intergenic | 40.0% |
AAGATACTTGCTCTGGTGTA+AGG | - | chr1_4:45790008-45790027 | None:intergenic | 40.0% | |
TCCATAATCTGGATTGCTGA+AGG | - | chr1_4:45790157-45790176 | None:intergenic | 40.0% | |
CGTTCAGGATTTCCATAATC+TGG | - | chr1_4:45790168-45790187 | None:intergenic | 40.0% | |
TAGCTCAAGTGCTTAACGTT+TGG | + | chr1_4:45790208-45790227 | Msa0165330:CDS | 40.0% | |
TCAAGTGCTTAACGTTTGGA+AGG | + | chr1_4:45790212-45790231 | Msa0165330:CDS | 40.0% | |
GAGTAAAAAGAAGAACACGG+TGG | - | chr1_4:45790245-45790264 | None:intergenic | 40.0% | |
CCACTTGTGGACATATTTAC+CGG | + | chr1_4:45790304-45790323 | Msa0165330:CDS | 40.0% | |
CACTCCTGTAAAACAGAGAA+TGG | + | chr1_4:45790341-45790360 | Msa0165330:CDS | 40.0% | |
TGATCATCTTTGACCCTGAT+TGG | + | chr1_4:45790463-45790482 | Msa0165330:CDS | 40.0% | |
AAAGGGGGAAACGAAAAATG+GGG | + | chr1_4:45790628-45790647 | Msa0165330:intron | 40.0% | |
ACTGAATGAGGTGATAAAGG+AGG | - | chr1_4:45790729-45790748 | None:intergenic | 40.0% | |
AATCACACGTGGAACTATAG+AGG | + | chr1_4:45790927-45790946 | Msa0165330:CDS | 40.0% | |
TTGAATGTGGATGGAGAAAC+TGG | + | chr1_4:45791060-45791079 | Msa0165330:CDS | 40.0% | |
TGAATGTGGATGGAGAAACT+GGG | + | chr1_4:45791061-45791080 | Msa0165330:CDS | 40.0% | |
AGAGGATCTTCAAGAGGAAA+AGG | + | chr1_4:45791234-45791253 | Msa0165330:CDS | 40.0% | |
GAGGATCTTCAAGAGGAAAA+GGG | + | chr1_4:45791235-45791254 | Msa0165330:CDS | 40.0% | |
! | GAGCAGGTTGACAAAAGTAA+TGG | + | chr1_4:45791261-45791280 | Msa0165330:CDS | 40.0% |
! | GCAGGTTGACAAAAGTAATG+GGG | + | chr1_4:45791263-45791282 | Msa0165330:CDS | 40.0% |
TCTCATCTTCTCCTCATCAT+GGG | - | chr1_4:45791621-45791640 | None:intergenic | 40.0% | |
!! | AATTTGTTAGATCCCCTGCT+TGG | - | chr1_4:45791848-45791867 | None:intergenic | 40.0% |
ATTCAATGGATATGCTGCTG+GGG | + | chr1_4:45791865-45791884 | Msa0165330:CDS | 40.0% | |
CTGTAGATGTTAGAACTTCC+AGG | + | chr1_4:45791996-45792015 | Msa0165330:CDS | 40.0% | |
! | TGGACTCCAGATGAATTTTC+AGG | - | chr1_4:45792025-45792044 | None:intergenic | 40.0% |
TCCGAATCATTACTTCAGGT+TGG | - | chr1_4:45792045-45792064 | None:intergenic | 40.0% | |
! | ACCTTTTTCCAACAGAAAGG+TGG | + | chr1_4:45792073-45792092 | Msa0165330:CDS | 40.0% |
CAGCATAGTTCAGCATTTCA+AGG | + | chr1_4:45792111-45792130 | Msa0165330:CDS | 40.0% | |
TAGTTCAGCATTTCAAGGAC+AGG | + | chr1_4:45792116-45792135 | Msa0165330:CDS | 40.0% | |
! | AACAGGGGAAGATCTTTTGA+GGG | - | chr1_4:45792145-45792164 | None:intergenic | 40.0% |
GAAATAGCGACTCTGCATAA+AGG | + | chr1_4:45792181-45792200 | Msa0165330:CDS | 40.0% | |
ACTCTGCATAAAGGGTCAAA+TGG | + | chr1_4:45792190-45792209 | Msa0165330:CDS | 40.0% | |
ACTGCTGATCACAGAAGTTT+AGG | + | chr1_4:45792287-45792306 | Msa0165330:three_prime_UTR | 40.0% | |
CTGCTGATCACAGAAGTTTA+GGG | + | chr1_4:45792288-45792307 | Msa0165330:three_prime_UTR | 40.0% | |
TGCTGATCACAGAAGTTTAG+GGG | + | chr1_4:45792289-45792308 | Msa0165330:three_prime_UTR | 40.0% | |
ACGTAGACTGAACATTAGAC+AGG | + | chr1_4:45792321-45792340 | Msa0165330:three_prime_UTR | 40.0% | |
CGTAGACTGAACATTAGACA+GGG | + | chr1_4:45792322-45792341 | Msa0165330:three_prime_UTR | 40.0% | |
AATGCACAATTGCATATCGG+TGG | + | chr1_4:45792418-45792437 | Msa0165330:three_prime_UTR | 40.0% | |
ACTTGGGAATATGCTGCAAA+TGG | + | chr1_4:45792460-45792479 | Msa0165330:three_prime_UTR | 40.0% | |
AATGTGGCGTTCGATGTCTT+CGG | - | chr1_4:45786638-45786657 | None:intergenic | 45.0% | |
ATTGAAAGGCCGAGAGATGT+TGG | + | chr1_4:45786934-45786953 | Msa0165330:CDS | 45.0% | |
TTTGGACGAAGGGATTGATG+AGG | + | chr1_4:45786987-45787006 | Msa0165330:CDS | 45.0% | |
TTGGACGAAGGGATTGATGA+GGG | + | chr1_4:45786988-45787007 | Msa0165330:CDS | 45.0% | |
ATTGGATGGCATAGTGTGCT+AGG | + | chr1_4:45787562-45787581 | Msa0165330:intron | 45.0% | |
! | AGCTGCCAGATCATTTTCTC+AGG | + | chr1_4:45787819-45787838 | Msa0165330:CDS | 45.0% |
TGCAGCCTGAGAAAATGATC+TGG | - | chr1_4:45787827-45787846 | None:intergenic | 45.0% | |
CTCATTGTCGTCTAGAGGTT+TGG | - | chr1_4:45787950-45787969 | None:intergenic | 45.0% | |
CAAACCTCTAGACGACAATG+AGG | + | chr1_4:45787948-45787967 | Msa0165330:CDS | 45.0% | |
AACCTCTAGACGACAATGAG+GGG | + | chr1_4:45787950-45787969 | Msa0165330:CDS | 45.0% | |
ATCCTCAGAAGAAACACGCT+TGG | - | chr1_4:45788034-45788053 | None:intergenic | 45.0% | |
GATAGACAACTGGGTGAAAG+TGG | + | chr1_4:45788051-45788070 | Msa0165330:CDS | 45.0% | |
ACAGCAAGCAAAGTAGTCTG+GGG | - | chr1_4:45788562-45788581 | None:intergenic | 45.0% | |
CTACAGCAAGCAAAGTAGTC+TGG | - | chr1_4:45788564-45788583 | None:intergenic | 45.0% | |
!! | AGGTTGGTGTTCAATGGATG+TGG | + | chr1_4:45788811-45788830 | Msa0165330:CDS | 45.0% |
! | GGTTGGTGTTCAATGGATGT+GGG | + | chr1_4:45788812-45788831 | Msa0165330:CDS | 45.0% |
!! | ATTGGTGATGAGATGGGTCT+TGG | + | chr1_4:45788864-45788883 | Msa0165330:CDS | 45.0% |
! | CTGGGTGCTTTGCATTTTAG+TGG | + | chr1_4:45788912-45788931 | Msa0165330:CDS | 45.0% |
ACTCCTGCGACAATGGAAAA+GGG | + | chr1_4:45788971-45788990 | Msa0165330:CDS | 45.0% | |
GCTTTCAGAGTCTGTTCCAT+CGG | - | chr1_4:45789084-45789103 | None:intergenic | 45.0% | |
CGTGTCATGAGATCAGAATC+TGG | + | chr1_4:45789179-45789198 | Msa0165330:CDS | 45.0% | |
TCACCACTTATGAGCAGCTA+AGG | + | chr1_4:45789210-45789229 | Msa0165330:CDS | 45.0% | |
! | GGCAAAACACCCAATTTTCC+AGG | - | chr1_4:45789428-45789447 | None:intergenic | 45.0% |
GCAAATTCGGCTTCAAACAC+AGG | - | chr1_4:45789449-45789468 | None:intergenic | 45.0% | |
GCAGTTCCTATAAGAGTTGG+CGG | + | chr1_4:45789467-45789486 | Msa0165330:CDS | 45.0% | |
AAGTATCCACAGCATACAGG+TGG | + | chr1_4:45789513-45789532 | Msa0165330:intron | 45.0% | |
AGTATCCACAGCATACAGGT+GGG | + | chr1_4:45789514-45789533 | Msa0165330:intron | 45.0% | |
GGACATCCTAGGATCTCAAT+AGG | - | chr1_4:45789741-45789760 | None:intergenic | 45.0% | |
ATTGAGATCCTAGGATGTCC+AGG | + | chr1_4:45789741-45789760 | Msa0165330:intron | 45.0% | |
TCATCTTTCCTGGACATCCT+AGG | - | chr1_4:45789752-45789771 | None:intergenic | 45.0% | |
!!! | AGCATTTTTGGCAAGCACTG+AGG | + | chr1_4:45790035-45790054 | Msa0165330:CDS | 45.0% |
!!! | ATTTTTGGCAAGCACTGAGG+TGG | + | chr1_4:45790038-45790057 | Msa0165330:CDS | 45.0% |
CACTGAGGTGGAGGAAATAT+TGG | + | chr1_4:45790050-45790069 | Msa0165330:CDS | 45.0% | |
GAGGTGGAGGAAATATTGGA+TGG | + | chr1_4:45790054-45790073 | Msa0165330:CDS | 45.0% | |
GTGGAGGAAATATTGGATGG+AGG | + | chr1_4:45790057-45790076 | Msa0165330:CDS | 45.0% | |
AGGAAATATTGGATGGAGGC+AGG | + | chr1_4:45790061-45790080 | Msa0165330:CDS | 45.0% | |
GGAGGCAGGAATTCACTTTA+TGG | + | chr1_4:45790075-45790094 | Msa0165330:CDS | 45.0% | |
ATCACCCAGACCTACTTGAA+AGG | + | chr1_4:45790124-45790143 | Msa0165330:CDS | 45.0% | |
TCACCCAGACCTACTTGAAA+GGG | + | chr1_4:45790125-45790144 | Msa0165330:CDS | 45.0% | |
! | GTTCCCTTTCAAGTAGGTCT+GGG | - | chr1_4:45790131-45790150 | None:intergenic | 45.0% |
! | TGTTCCCTTTCAAGTAGGTC+TGG | - | chr1_4:45790132-45790151 | None:intergenic | 45.0% |
AGACCTACTTGAAAGGGAAC+AGG | + | chr1_4:45790131-45790150 | Msa0165330:CDS | 45.0% | |
GCCTTCAGCAATCCAGATTA+TGG | + | chr1_4:45790153-45790172 | Msa0165330:CDS | 45.0% | |
TATGGAAATCCTGAACGCAG+TGG | + | chr1_4:45790171-45790190 | Msa0165330:CDS | 45.0% | |
ATGGAAATCCTGAACGCAGT+GGG | + | chr1_4:45790172-45790191 | Msa0165330:CDS | 45.0% | |
! | TTCATTTTCCCACTGCGTTC+AGG | - | chr1_4:45790183-45790202 | None:intergenic | 45.0% |
CTTAACGTTTGGAAGGAGCA+GGG | + | chr1_4:45790219-45790238 | Msa0165330:CDS | 45.0% | |
CCGGTAAATATGTCCACAAG+TGG | - | chr1_4:45790307-45790326 | None:intergenic | 45.0% | |
CAGTCGAAGGATTCCAATCA+GGG | - | chr1_4:45790479-45790498 | None:intergenic | 45.0% | |
TCAGTCGAAGGATTCCAATC+AGG | - | chr1_4:45790480-45790499 | None:intergenic | 45.0% | |
GAATCCTTCGACTGATATGC+AGG | + | chr1_4:45790485-45790504 | Msa0165330:CDS | 45.0% | |
CATACCTGCATATCAGTCGA+AGG | - | chr1_4:45790492-45790511 | None:intergenic | 45.0% | |
CACAACTAGCAAACTGGTCA+TGG | - | chr1_4:45790593-45790612 | None:intergenic | 45.0% | |
!! | ACCAGTTTGCTAGTTGTGTC+TGG | + | chr1_4:45790595-45790614 | Msa0165330:intron | 45.0% |
TCCAGACACAACTAGCAAAC+TGG | - | chr1_4:45790599-45790618 | None:intergenic | 45.0% | |
CATGGCGAATTGGTCAGAAA+CGG | + | chr1_4:45790884-45790903 | Msa0165330:CDS | 45.0% | |
ATGGCGAATTGGTCAGAAAC+GGG | + | chr1_4:45790885-45790904 | Msa0165330:CDS | 45.0% | |
TGAAGAACCCACAGCAGAAA+AGG | + | chr1_4:45791001-45791020 | Msa0165330:CDS | 45.0% | |
!! | CTTTAAGGCCCGAGATATGA+AGG | + | chr1_4:45791026-45791045 | Msa0165330:CDS | 45.0% |
TGGGGCACATCAAGAAAATC+AGG | + | chr1_4:45791137-45791156 | Msa0165330:CDS | 45.0% | |
!! | GGTTCTGAAGATGATGCAGT+TGG | + | chr1_4:45791192-45791211 | Msa0165330:CDS | 45.0% |
!! | GATGATGCAGTTGGTGATGA+TGG | + | chr1_4:45791201-45791220 | Msa0165330:CDS | 45.0% |
AAGAGGAAAAGGGAAAGAGC+AGG | + | chr1_4:45791245-45791264 | Msa0165330:CDS | 45.0% | |
GGGCATCCATGATCAAATCA+TGG | - | chr1_4:45791601-45791620 | None:intergenic | 45.0% | |
GTCTCATCTTCTCCTCATCA+TGG | - | chr1_4:45791622-45791641 | None:intergenic | 45.0% | |
CCGAGACGCTTTCATGATTT+CGG | - | chr1_4:45791709-45791728 | None:intergenic | 45.0% | |
!! | CCGAAATCATGAAAGCGTCT+CGG | + | chr1_4:45791706-45791725 | Msa0165330:CDS | 45.0% |
ATCTGATGAATCGCCAAGCA+GGG | + | chr1_4:45791832-45791851 | Msa0165330:CDS | 45.0% | |
CAAGAAAAAGCCATCAGTGC+CGG | + | chr1_4:45791944-45791963 | Msa0165330:CDS | 45.0% | |
AAGAAAAAGCCATCAGTGCC+GGG | + | chr1_4:45791945-45791964 | Msa0165330:CDS | 45.0% | |
AGCATCAGTTTGGTCAGTCA+AGG | + | chr1_4:45791972-45791991 | Msa0165330:CDS | 45.0% | |
!! | AGATGAATTTTCAGGAGCCC+TGG | - | chr1_4:45792017-45792036 | None:intergenic | 45.0% |
AGGGCTCCTGAAAATTCATC+TGG | + | chr1_4:45792016-45792035 | Msa0165330:CDS | 45.0% | |
GCCACCTTTCTGTTGGAAAA+AGG | - | chr1_4:45792077-45792096 | None:intergenic | 45.0% | |
TACAACTGCCACCTTTCTGT+TGG | - | chr1_4:45792084-45792103 | None:intergenic | 45.0% | |
! | GAACAGGGGAAGATCTTTTG+AGG | - | chr1_4:45792146-45792165 | None:intergenic | 45.0% |
AAGGGTCAAATGGTTCCCAT+TGG | + | chr1_4:45792200-45792219 | Msa0165330:CDS | 45.0% | |
AGGGTCAAATGGTTCCCATT+GGG | + | chr1_4:45792201-45792220 | Msa0165330:CDS | 45.0% | |
GATCAGCAGTAATGAGCAGT+TGG | - | chr1_4:45792277-45792296 | None:intergenic | 45.0% | |
!! | TTATATAATTTAAAAATGTA+AGG | + | chr1_4:45788258-45788277 | Msa0165330:intron | 5.0% |
!! | TATATAATTTAAAAATGTAA+GGG | + | chr1_4:45788259-45788278 | Msa0165330:intron | 5.0% |
!! | AAAATAATATTCAAATTATT+TGG | - | chr1_4:45789866-45789885 | None:intergenic | 5.0% |
ATGTGGCGTTCGATGTCTTC+GGG | - | chr1_4:45786637-45786656 | None:intergenic | 50.0% | |
! | CGAACGCCACATTTTCGATG+AGG | + | chr1_4:45786645-45786664 | Msa0165330:CDS | 50.0% |
! | GATTGATGAGGGTGGTGGTT+CGG | + | chr1_4:45786999-45787018 | Msa0165330:CDS | 50.0% |
TTCTTGCTGCCGATAGGTTG+AGG | + | chr1_4:45787034-45787053 | Msa0165330:CDS | 50.0% | |
ACCTGCGAAGCGGTTTAAGA+CGG | + | chr1_4:45787218-45787237 | Msa0165330:CDS | 50.0% | |
TCTGGCAGCTCTTTCAACAC+TGG | - | chr1_4:45787809-45787828 | None:intergenic | 50.0% | |
TCAAGCTTCGGTACCTCTTC+AGG | - | chr1_4:45787880-45787899 | None:intergenic | 50.0% | |
!! | ATGGTGGGTGCATCAAGCTT+CGG | - | chr1_4:45787892-45787911 | None:intergenic | 50.0% |
AGCCTGCGAAAAGGAATGGT+GGG | - | chr1_4:45787907-45787926 | None:intergenic | 50.0% | |
CTTGAGCCTGCGAAAAGGAA+TGG | - | chr1_4:45787911-45787930 | None:intergenic | 50.0% | |
GGTTTCTTGAGCCTGCGAAA+AGG | - | chr1_4:45787916-45787935 | None:intergenic | 50.0% | |
ACCTCTAGACGACAATGAGG+GGG | + | chr1_4:45787951-45787970 | Msa0165330:CDS | 50.0% | |
GACCAAGCGTGTTTCTTCTG+AGG | + | chr1_4:45788029-45788048 | Msa0165330:CDS | 50.0% | |
GGCAGTCCTGATGGTATATC+TGG | + | chr1_4:45788178-45788197 | Msa0165330:intron | 50.0% | |
CCTTCTCCATCAGTGACAGA+GGG | - | chr1_4:45788495-45788514 | None:intergenic | 50.0% | |
ACCTTCTCCATCAGTGACAG+AGG | - | chr1_4:45788496-45788515 | None:intergenic | 50.0% | |
CTGTCACTGATGGAGAAGGT+TGG | + | chr1_4:45788496-45788515 | Msa0165330:intron | 50.0% | |
AACTGCCACCAGTGTATGGT+GGG | - | chr1_4:45788529-45788548 | None:intergenic | 50.0% | |
CATGAACTGCCACCAGTGTA+TGG | - | chr1_4:45788533-45788552 | None:intergenic | 50.0% | |
CAGCAAGCAAAGTAGTCTGG+GGG | - | chr1_4:45788561-45788580 | None:intergenic | 50.0% | |
! | CATTGTCGCAGGAGTGTAAC+AGG | - | chr1_4:45788966-45788985 | None:intergenic | 50.0% |
CTGTTACACTCCTGCGACAA+TGG | + | chr1_4:45788964-45788983 | Msa0165330:CDS | 50.0% | |
CACTCCTGCGACAATGGAAA+AGG | + | chr1_4:45788970-45788989 | Msa0165330:CDS | 50.0% | |
! | CTTCCCTTTTCCATTGTCGC+AGG | - | chr1_4:45788977-45788996 | None:intergenic | 50.0% |
ACACGATTCTGCTCAGGATC+TGG | + | chr1_4:45789034-45789053 | Msa0165330:CDS | 50.0% | |
AAGAAGCGAGCTGAATCCGA+TGG | + | chr1_4:45789065-45789084 | Msa0165330:CDS | 50.0% | |
! | TGTTGTTTACAGGTGTGCGG+TGG | + | chr1_4:45789885-45789904 | Msa0165330:intron | 50.0% |
! | AGGCCTGTTCCCTTTCAAGT+AGG | - | chr1_4:45790137-45790156 | None:intergenic | 50.0% |
GCTTAACGTTTGGAAGGAGC+AGG | + | chr1_4:45790218-45790237 | Msa0165330:CDS | 50.0% | |
AACAACCAAAGTTGGGGGGT+TGG | + | chr1_4:45790413-45790432 | Msa0165330:CDS | 50.0% | |
ACAACCAAAGTTGGGGGGTT+GGG | + | chr1_4:45790414-45790433 | Msa0165330:CDS | 50.0% | |
GGGTTGGGGACAAATCTTAC+TGG | + | chr1_4:45790429-45790448 | Msa0165330:CDS | 50.0% | |
AAGAGAGGATGGAAGGGGTA+TGG | + | chr1_4:45790684-45790703 | Msa0165330:intron | 50.0% | |
! | AGGATGGAAGGGGTATGGAA+GGG | + | chr1_4:45790689-45790708 | Msa0165330:intron | 50.0% |
! | TATAGGCTAGAGAGCGTGCA+TGG | + | chr1_4:45790866-45790885 | Msa0165330:intron | 50.0% |
! | GATGATGGCAAATCACGCAG+AGG | + | chr1_4:45791216-45791235 | Msa0165330:CDS | 50.0% |
TCACGCAGAGGATCTTCAAG+AGG | + | chr1_4:45791228-45791247 | Msa0165330:CDS | 50.0% | |
GATCATGGATGCCCATGATG+AGG | + | chr1_4:45791607-45791626 | Msa0165330:CDS | 50.0% | |
TGCAGCTCTTTGTGCAACCT+TGG | - | chr1_4:45791660-45791679 | None:intergenic | 50.0% | |
! | AAAGCGTCTCGGTTCCTACA+TGG | + | chr1_4:45791717-45791736 | Msa0165330:CDS | 50.0% |
CTGGTGCACCATCATCTGTT+CGG | + | chr1_4:45791759-45791778 | Msa0165330:CDS | 50.0% | |
AACTTCCGCCGAACAGATGA+TGG | - | chr1_4:45791770-45791789 | None:intergenic | 50.0% | |
TCATCTGTTCGGCGGAAGTT+TGG | + | chr1_4:45791770-45791789 | Msa0165330:CDS | 50.0% | |
CATCTGATGAATCGCCAAGC+AGG | + | chr1_4:45791831-45791850 | Msa0165330:CDS | 50.0% | |
TCTGATGAATCGCCAAGCAG+GGG | + | chr1_4:45791833-45791852 | Msa0165330:CDS | 50.0% | |
ACCAAACTGATGCTCAAGCC+CGG | - | chr1_4:45791966-45791985 | None:intergenic | 50.0% | |
! | GTCTGGCTTCAGAACCCAAT+GGG | - | chr1_4:45792218-45792237 | None:intergenic | 50.0% |
! | AGTCTGGCTTCAGAACCCAA+TGG | - | chr1_4:45792219-45792238 | None:intergenic | 50.0% |
CCAGTTTCCCAGAGAGGAGA+GGG | - | chr1_4:45786408-45786427 | None:intergenic | 55.0% | |
! | CCTCTCCTCTCTGGGAAACT+GGG | + | chr1_4:45786406-45786425 | Msa0165330:five_prime_UTR | 55.0% |
CGATTCCCAGTTTCCCAGAG+AGG | - | chr1_4:45786414-45786433 | None:intergenic | 55.0% | |
GCGTTCGATGTCTTCGGGAT+TGG | - | chr1_4:45786632-45786651 | None:intergenic | 55.0% | |
GACGAAGGGATTGATGAGGG+TGG | + | chr1_4:45786991-45787010 | Msa0165330:CDS | 55.0% | |
GAAGGGATTGATGAGGGTGG+TGG | + | chr1_4:45786994-45787013 | Msa0165330:CDS | 55.0% | |
AGCGTGTTCTTGCTGCCGAT+AGG | + | chr1_4:45787028-45787047 | Msa0165330:CDS | 55.0% | |
ACCGTCTTAAACCGCTTCGC+AGG | - | chr1_4:45787222-45787241 | None:intergenic | 55.0% | |
! | CACGTGGGTGACTCTAGAAG+TGG | - | chr1_4:45787456-45787475 | None:intergenic | 55.0% |
!! | CACTTCTAGAGTCACCCACG+TGG | + | chr1_4:45787454-45787473 | Msa0165330:intron | 55.0% |
! | TCTAGAGTCACCCACGTGGT+TGG | + | chr1_4:45787458-45787477 | Msa0165330:intron | 55.0% |
GCCTAAGCAGCTTGGAGGTT+GGG | - | chr1_4:45787858-45787877 | None:intergenic | 55.0% | |
TTCAGGCCTAAGCAGCTTGG+AGG | - | chr1_4:45787863-45787882 | None:intergenic | 55.0% | |
CTCTTCAGGCCTAAGCAGCT+TGG | - | chr1_4:45787866-45787885 | None:intergenic | 55.0% | |
CAAGCTGCTTAGGCCTGAAG+AGG | + | chr1_4:45787864-45787883 | Msa0165330:CDS | 55.0% | |
! | CACCCACCATTCCTTTTCGC+AGG | + | chr1_4:45787902-45787921 | Msa0165330:CDS | 55.0% |
GAGCCTGCGAAAAGGAATGG+TGG | - | chr1_4:45787908-45787927 | None:intergenic | 55.0% | |
TCCCCCTCATTGTCGTCTAG+AGG | - | chr1_4:45787955-45787974 | None:intergenic | 55.0% | |
AAAAAGAAGCGACCTGGGCC+TGG | + | chr1_4:45787997-45788016 | Msa0165330:CDS | 55.0% | |
CGCTTGGTCCATTTCCTACC+AGG | - | chr1_4:45788018-45788037 | None:intergenic | 55.0% | |
TTAGCGCCCTCTGTCACTGA+TGG | + | chr1_4:45788486-45788505 | Msa0165330:intron | 55.0% | |
CCCTCTGTCACTGATGGAGA+AGG | + | chr1_4:45788492-45788511 | Msa0165330:intron | 55.0% | |
GCTTACGACCCACCATACAC+TGG | + | chr1_4:45788518-45788537 | Msa0165330:intron | 55.0% | |
TACGACCCACCATACACTGG+TGG | + | chr1_4:45788521-45788540 | Msa0165330:intron | 55.0% | |
GAACTGCCACCAGTGTATGG+TGG | - | chr1_4:45788530-45788549 | None:intergenic | 55.0% | |
AGCAAAGTAGTCTGGGGGAG+TGG | - | chr1_4:45788556-45788575 | None:intergenic | 55.0% | |
GAGTTGCACTGCCAAAGAGC+TGG | + | chr1_4:45788834-45788853 | Msa0165330:CDS | 55.0% | |
TTGCACTGCCAAAGAGCTGG+TGG | + | chr1_4:45788837-45788856 | Msa0165330:CDS | 55.0% | |
GCTAGGGTAACTTCGGCGTT+TGG | - | chr1_4:45789308-45789327 | None:intergenic | 55.0% | |
ATTGGCCCACCTGTATGCTG+TGG | - | chr1_4:45789522-45789541 | None:intergenic | 55.0% | |
!! | TTTGGCAAGCACTGAGGTGG+AGG | + | chr1_4:45790041-45790060 | Msa0165330:CDS | 55.0% |
CAACCAAAGTTGGGGGGTTG+GGG | + | chr1_4:45790415-45790434 | Msa0165330:CDS | 55.0% | |
GGAAAACCGGTGTGTGTGTG+TGG | + | chr1_4:45790649-45790668 | Msa0165330:intron | 55.0% | |
AAACCGGTGTGTGTGTGTGG+TGG | + | chr1_4:45790652-45790671 | Msa0165330:intron | 55.0% | |
AACCGGTGTGTGTGTGTGGT+GGG | + | chr1_4:45790653-45790672 | Msa0165330:intron | 55.0% | |
TGGGGGAAGAGAGGATGGAA+GGG | + | chr1_4:45790678-45790697 | Msa0165330:intron | 55.0% | |
! | GAGGATGGAAGGGGTATGGA+AGG | + | chr1_4:45790688-45790707 | Msa0165330:intron | 55.0% |
! | GGATGGAAGGGGTATGGAAG+GGG | + | chr1_4:45790690-45790709 | Msa0165330:intron | 55.0% |
! | GATGGAAGGGGTATGGAAGG+GGG | + | chr1_4:45790691-45790710 | Msa0165330:intron | 55.0% |
! | ATGGAAGGGGGCATGGACAA+TGG | + | chr1_4:45790703-45790722 | Msa0165330:intron | 55.0% |
! | AGAGAGCGTGCATGGCGAAT+TGG | + | chr1_4:45790874-45790893 | Msa0165330:CDS | 55.0% |
GGAGAAGATGAGACTCGACG+AGG | + | chr1_4:45791628-45791647 | Msa0165330:CDS | 55.0% | |
ACTCGACGAGGAAGCTTCCA+AGG | + | chr1_4:45791640-45791659 | Msa0165330:CDS | 55.0% | |
GTCTCGGTTCCTACATGGAC+AGG | + | chr1_4:45791722-45791741 | Msa0165330:CDS | 55.0% | |
CGGTTCCTACATGGACAGGA+AGG | + | chr1_4:45791726-45791745 | Msa0165330:CDS | 55.0% | |
CCTGACCTTCCTGTCCATGT+AGG | - | chr1_4:45791734-45791753 | None:intergenic | 55.0% | |
CCTACATGGACAGGAAGGTC+AGG | + | chr1_4:45791731-45791750 | Msa0165330:CDS | 55.0% | |
GTGCACCATCATCTGTTCGG+CGG | + | chr1_4:45791762-45791781 | Msa0165330:CDS | 55.0% | |
TATGCTGCTGGGGCTTCTTC+TGG | + | chr1_4:45791875-45791894 | Msa0165330:CDS | 55.0% | |
TGCTGGGGCTTCTTCTGGTA+AGG | + | chr1_4:45791880-45791899 | Msa0165330:CDS | 55.0% | |
ACCCAGAACCCTCTCCTCTC+TGG | + | chr1_4:45786397-45786416 | Msa0165330:five_prime_UTR | 60.0% | |
CCCAGAGAGGAGAGGGTTCT+GGG | - | chr1_4:45786401-45786420 | None:intergenic | 60.0% | |
CCCAGAACCCTCTCCTCTCT+GGG | + | chr1_4:45786398-45786417 | Msa0165330:five_prime_UTR | 60.0% | |
TCCCAGAGAGGAGAGGGTTC+TGG | - | chr1_4:45786402-45786421 | None:intergenic | 60.0% | |
! | CCCTCTCCTCTCTGGGAAAC+TGG | + | chr1_4:45786405-45786424 | Msa0165330:five_prime_UTR | 60.0% |
CCCAGTTTCCCAGAGAGGAG+AGG | - | chr1_4:45786409-45786428 | None:intergenic | 60.0% | |
GTTCTCGATGCAGCCTCTGC+TGG | + | chr1_4:45787273-45787292 | Msa0165330:CDS | 60.0% | |
GCCCAACCTCCAAGCTGCTT+AGG | + | chr1_4:45787854-45787873 | Msa0165330:CDS | 60.0% | |
GGCCTAAGCAGCTTGGAGGT+TGG | - | chr1_4:45787859-45787878 | None:intergenic | 60.0% | |
GACCTGGGCCTGGTAGGAAA+TGG | + | chr1_4:45788007-45788026 | Msa0165330:CDS | 60.0% | |
GTCCATTTCCTACCAGGCCC+AGG | - | chr1_4:45788012-45788031 | None:intergenic | 60.0% | |
TGTCCCCAACCCCCCAACTT+TGG | - | chr1_4:45790421-45790440 | None:intergenic | 60.0% | |
ACCGGTGTGTGTGTGTGGTG+GGG | + | chr1_4:45790654-45790673 | Msa0165330:intron | 60.0% | |
! | TGTGTGTGTGTGGTGGGGGT+GGG | + | chr1_4:45790659-45790678 | Msa0165330:intron | 60.0% |
GTGGGGGAAGAGAGGATGGA+AGG | + | chr1_4:45790677-45790696 | Msa0165330:intron | 60.0% | |
GGGGGAAGAGAGGATGGAAG+GGG | + | chr1_4:45790679-45790698 | Msa0165330:intron | 60.0% | |
! | AAGGGGTATGGAAGGGGGCA+TGG | + | chr1_4:45790696-45790715 | Msa0165330:intron | 60.0% |
ACAGGAAGGTCAGGAGCTGC+TGG | + | chr1_4:45791740-45791759 | Msa0165330:CDS | 60.0% | |
! | ATGCTCAAGCCCGGCACTGA+TGG | - | chr1_4:45791957-45791976 | None:intergenic | 60.0% |
GCCGGGCTTGAGCATCAGTT+TGG | + | chr1_4:45791962-45791981 | Msa0165330:CDS | 60.0% | |
AGAAGCGACCTGGGCCTGGT+AGG | + | chr1_4:45788001-45788020 | Msa0165330:CDS | 65.0% | |
CCCCCACCACACACACACAC+CGG | - | chr1_4:45790658-45790677 | None:intergenic | 65.0% | |
CCGGTGTGTGTGTGTGGTGG+GGG | + | chr1_4:45790655-45790674 | Msa0165330:intron | 65.0% | |
! | GTGTGTGTGTGTGGTGGGGG+TGG | + | chr1_4:45790658-45790677 | Msa0165330:intron | 65.0% |
! | GTGTGTGTGTGGTGGGGGTG+GGG | + | chr1_4:45790660-45790679 | Msa0165330:intron | 65.0% |
! | TGTGTGTGTGGTGGGGGTGG+GGG | + | chr1_4:45790661-45790680 | Msa0165330:intron | 65.0% |
TGGTGGGGGTGGGGGAAGAG+AGG | + | chr1_4:45790669-45790688 | Msa0165330:intron | 70.0% | |
GGGGGTGGGGGAAGAGAGGA+TGG | + | chr1_4:45790673-45790692 | Msa0165330:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_4 | gene | 45786333 | 45792580 | 45786333 | ID=Msa0165330;Name=Msa0165330 |
chr1_4 | mRNA | 45786333 | 45792580 | 45786333 | ID=Msa0165330-mRNA-1;Parent=Msa0165330;Name=Msa0165330-mRNA-1;_AED=0.02;_eAED=0.02;_QI=244|1|1|1|1|1|7|331|1215 |
chr1_4 | exon | 45786333 | 45786666 | 45786333 | ID=Msa0165330-mRNA-1:exon:13134;Parent=Msa0165330-mRNA-1 |
chr1_4 | exon | 45786772 | 45787308 | 45786772 | ID=Msa0165330-mRNA-1:exon:13135;Parent=Msa0165330-mRNA-1 |
chr1_4 | exon | 45787667 | 45788072 | 45787667 | ID=Msa0165330-mRNA-1:exon:13136;Parent=Msa0165330-mRNA-1 |
chr1_4 | exon | 45788658 | 45789531 | 45788658 | ID=Msa0165330-mRNA-1:exon:13137;Parent=Msa0165330-mRNA-1 |
chr1_4 | exon | 45789897 | 45790506 | 45789897 | ID=Msa0165330-mRNA-1:exon:13138;Parent=Msa0165330-mRNA-1 |
chr1_4 | exon | 45790871 | 45791338 | 45790871 | ID=Msa0165330-mRNA-1:exon:13139;Parent=Msa0165330-mRNA-1 |
chr1_4 | exon | 45791587 | 45792580 | 45791587 | ID=Msa0165330-mRNA-1:exon:13140;Parent=Msa0165330-mRNA-1 |
chr1_4 | five_prime_UTR | 45786333 | 45786576 | 45786333 | ID=Msa0165330-mRNA-1:five_prime_utr;Parent=Msa0165330-mRNA-1 |
chr1_4 | CDS | 45786577 | 45786666 | 45786577 | ID=Msa0165330-mRNA-1:cds;Parent=Msa0165330-mRNA-1 |
chr1_4 | CDS | 45786772 | 45787308 | 45786772 | ID=Msa0165330-mRNA-1:cds;Parent=Msa0165330-mRNA-1 |
chr1_4 | CDS | 45787667 | 45788072 | 45787667 | ID=Msa0165330-mRNA-1:cds;Parent=Msa0165330-mRNA-1 |
chr1_4 | CDS | 45788658 | 45789531 | 45788658 | ID=Msa0165330-mRNA-1:cds;Parent=Msa0165330-mRNA-1 |
chr1_4 | CDS | 45789897 | 45790506 | 45789897 | ID=Msa0165330-mRNA-1:cds;Parent=Msa0165330-mRNA-1 |
chr1_4 | CDS | 45790871 | 45791338 | 45790871 | ID=Msa0165330-mRNA-1:cds;Parent=Msa0165330-mRNA-1 |
chr1_4 | CDS | 45791587 | 45792249 | 45791587 | ID=Msa0165330-mRNA-1:cds;Parent=Msa0165330-mRNA-1 |
chr1_4 | three_prime_UTR | 45792250 | 45792580 | 45792250 | ID=Msa0165330-mRNA-1:three_prime_utr;Parent=Msa0165330-mRNA-1 |
Gene Sequence |
Protein sequence |