AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0742510


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0742510 MtrunA17_Chr5g0444231 99.371 159 1 0 1 159 1 159 3.23e-117 331
Msa0742510 MtrunA17_Chr3g0099051 71.069 159 42 2 1 159 1 155 4.98e-79 234
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0742510 AT1G28490.1 64.375 160 53 3 1 159 1 157 7.35e-71 214
Msa0742510 AT1G28490.3 62.857 105 36 2 55 159 11 112 4.62e-40 134
Msa0742510 AT1G28490.2 62.857 105 36 2 55 159 17 118 7.09e-40 134

Find 46 sgRNAs with CRISPR-Local

Find 564 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTCTTTGACAACGTAAAA+TGG 0.199042 5_1:+62436227 None:intergenic
CAAAATTCTGAATATTTAAA+AGG 0.232840 5_1:-62436479 None:intergenic
TACCTGGGTGCGAGCATTGC+TGG 0.310121 5_1:+62434591 None:intergenic
AAAAGGGTTAATTAAGTAAA+TGG 0.324269 5_1:+62436455 None:intergenic
TGATAGAAAGGTGGATGAAT+TGG 0.340172 5_1:-62434695 Msa0742510:intron
CAGAATCTGGAATTGGGAAT+TGG 0.351772 5_1:+62436277 None:intergenic
GACGTACTTTGATGAGAATC+TGG 0.370989 5_1:+62434275 None:intergenic
CATTATCCCCAGAGGCATAT+TGG 0.373000 5_1:+62434243 None:intergenic
TAGCATCTAGAGATCCTTCT+TGG 0.380240 5_1:-62434657 Msa0742510:CDS
TGGGAAAACACTTCTGATAC+TGG 0.386415 5_1:-62435601 Msa0742510:CDS
AACGAACACTAAGCTTTGTT+TGG 0.402381 5_1:+62436340 None:intergenic
CATTGCTGGTCCACCTCCTC+CGG 0.425273 5_1:+62434605 None:intergenic
AAGTCTAACCAATATGCCTC+TGG 0.429106 5_1:-62434251 Msa0742510:CDS
ACACGAAATTGATGAACAAA+TGG 0.457215 5_1:+62436310 None:intergenic
GTGAAAAGAAAAGAAAGTAT+TGG 0.466803 5_1:+62436386 None:intergenic
CAGCAAGAACTTCCTTTGAA+AGG 0.473857 5_1:+62435566 None:intergenic
TTGTGGAAGTATTGAGTGGC+AGG 0.474925 5_1:-62435542 Msa0742510:intron
AAGGAAGTTCTTGCTGCTTG+TGG 0.475725 5_1:-62435559 Msa0742510:CDS
CTAGTATAAGTGGGATGCAC+AGG 0.476219 5_1:-62434313 Msa0742510:CDS
ACAACTCATGCTAGTATAAG+TGG 0.493222 5_1:-62434323 Msa0742510:CDS
ATTAAGAGAACAGTGGAAGC+TGG 0.496755 5_1:-62434362 Msa0742510:CDS
TCATAGAATCAGAATCAGAT+AGG 0.505091 5_1:-62434214 Msa0742510:CDS
ATGAAGTGGAGATTGAAAAC+CGG 0.508658 5_1:-62434624 Msa0742510:CDS
GAGAACAGTGGAAGCTGGAA+AGG 0.519334 5_1:-62434357 Msa0742510:CDS
AGTCTAACCAATATGCCTCT+GGG 0.528315 5_1:-62434250 Msa0742510:CDS
AGATTGAAAACCGGAGGAGG+TGG 0.529877 5_1:-62434615 Msa0742510:CDS
TCTAGAGATCCTTCTTGGTA+TGG 0.537717 5_1:-62434652 Msa0742510:CDS
TCTGGAATTGGGAATTGGAA+TGG 0.545373 5_1:+62436282 None:intergenic
AGAACAGTGGAAGCTGGAAA+GGG 0.568137 5_1:-62434356 Msa0742510:CDS
TGGAGATTGAAAACCGGAGG+AGG 0.573238 5_1:-62434618 Msa0742510:CDS
TTGGTATGGCATTGATGAAG+TGG 0.577534 5_1:-62434638 Msa0742510:CDS
TAAAATGGATCTTGAGCTGA+GGG 0.587285 5_1:+62436242 None:intergenic
CGAAATTGATGAACAAATGG+AGG 0.592194 5_1:+62436313 None:intergenic
ATTGATGAACAAATGGAGGA+AGG 0.594980 5_1:+62436317 None:intergenic
TGAGCATTTGAACCTTTCAA+AGG 0.596975 5_1:-62435578 Msa0742510:CDS
CTGCTTGTGGAAGTATTGAG+TGG 0.603126 5_1:-62435546 Msa0742510:CDS
TCATCAATGCCATACCAAGA+AGG 0.605775 5_1:+62434643 None:intergenic
GGATGCACAGGGAATTAATG+AGG 0.609838 5_1:-62434301 Msa0742510:CDS
GACCAGCAATGCTCGCACCC+AGG 0.617619 5_1:-62434593 Msa0742510:intron
CAACTCATGCTAGTATAAGT+GGG 0.625213 5_1:-62434322 Msa0742510:CDS
TAGTATAAGTGGGATGCACA+GGG 0.644916 5_1:-62434312 Msa0742510:CDS
GTAAAATGGATCTTGAGCTG+AGG 0.647163 5_1:+62436241 None:intergenic
GTCTAACCAATATGCCTCTG+GGG 0.647453 5_1:-62434249 Msa0742510:CDS
AAGTGGAGATTGAAAACCGG+AGG 0.652309 5_1:-62434621 Msa0742510:CDS
GCGCACAATTAAGAGAACAG+TGG 0.704934 5_1:-62434369 Msa0742510:CDS
GAAATCATCATTATCCCCAG+AGG 0.750638 5_1:+62434235 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTCATTATCAATTATTATTT+GGG - chr5_1:62433191-62433210 Msa0742510:intron 10.0%
!! ATATTTGTAAATATCATTAT+TGG - chr5_1:62433669-62433688 Msa0742510:intron 10.0%
!!! TATAATATTTTCATAGTTTA+GGG + chr5_1:62433868-62433887 None:intergenic 10.0%
!!! TTATAATATTTTCATAGTTT+AGG + chr5_1:62433869-62433888 None:intergenic 10.0%
!!! TGTCAATTTTTTTTTATATT+AGG - chr5_1:62436442-62436461 Msa0742510:five_prime_UTR 10.0%
!! TTCATTATCAATTATTATTT+GGG - chr5_1:62433191-62433210 Msa0742510:intron 10.0%
!! ATATTTGTAAATATCATTAT+TGG - chr5_1:62433669-62433688 Msa0742510:intron 10.0%
!!! TATAATATTTTCATAGTTTA+GGG + chr5_1:62433868-62433887 None:intergenic 10.0%
!!! TTATAATATTTTCATAGTTT+AGG + chr5_1:62433869-62433888 None:intergenic 10.0%
!!! TGTCAATTTTTTTTTATATT+AGG - chr5_1:62436442-62436461 Msa0742510:five_prime_UTR 10.0%
!!! CAAATAATAATTGATAATGA+AGG + chr5_1:62433192-62433211 None:intergenic 15.0%
!! CTTCATTATCAATTATTATT+TGG - chr5_1:62433190-62433209 Msa0742510:intron 15.0%
!!! ATTTTATGGTTTTTTTTATG+TGG - chr5_1:62433228-62433247 Msa0742510:intron 15.0%
!! AGTAACTTTAACATAAATAT+AGG - chr5_1:62435142-62435161 Msa0742510:intron 15.0%
!!! TTGGTTTTAAAAGTTAAATT+TGG - chr5_1:62435199-62435218 Msa0742510:intron 15.0%
!!! CAAATAATAATTGATAATGA+AGG + chr5_1:62433192-62433211 None:intergenic 15.0%
!! CTTCATTATCAATTATTATT+TGG - chr5_1:62433190-62433209 Msa0742510:intron 15.0%
!!! ATTTTATGGTTTTTTTTATG+TGG - chr5_1:62433228-62433247 Msa0742510:intron 15.0%
!! AGTAACTTTAACATAAATAT+AGG - chr5_1:62435142-62435161 Msa0742510:intron 15.0%
!!! TTGGTTTTAAAAGTTAAATT+TGG - chr5_1:62435199-62435218 Msa0742510:intron 15.0%
!! AAAAGGGTTAATTAAGTAAA+TGG + chr5_1:62432434-62432453 None:intergenic 20.0%
!!! AAATTTGCATTTTTTCTTCA+TGG - chr5_1:62432738-62432757 Msa0742510:intron 20.0%
!! CATCAATAAAAATAGGAATT+GGG + chr5_1:62432855-62432874 None:intergenic 20.0%
!! TACATTGCATCAATAAAAAT+AGG + chr5_1:62432862-62432881 None:intergenic 20.0%
!! CATCAATAAAAATAAGAACT+GGG + chr5_1:62433113-62433132 None:intergenic 20.0%
!!! TGTGATTGATATTGATTTTA+TGG - chr5_1:62433214-62433233 Msa0742510:intron 20.0%
!! TTCTTTAGCAAGAAAATTTA+AGG - chr5_1:62433609-62433628 Msa0742510:intron 20.0%
!! ATGGTTTATTCAAAATAAGA+AGG - chr5_1:62433971-62433990 Msa0742510:intron 20.0%
!! TGGTTTATTCAAAATAAGAA+GGG - chr5_1:62433972-62433991 Msa0742510:intron 20.0%
!!! GTGTTAATTTTTTGATAGAA+AGG - chr5_1:62434179-62434198 Msa0742510:intron 20.0%
!!! TTAATTTTTTGATAGAAAGG+TGG - chr5_1:62434182-62434201 Msa0742510:intron 20.0%
!!! TTTATTTTCTTGGTTACAAA+AGG + chr5_1:62434432-62434451 None:intergenic 20.0%
!!! AATGGAAAACTTTATTTTCT+TGG + chr5_1:62434442-62434461 None:intergenic 20.0%
!! AACAAATGTTGTTCATTAAT+AGG - chr5_1:62434493-62434512 Msa0742510:intron 20.0%
!! TACTATATAAGATGAAGAAA+GGG + chr5_1:62434727-62434746 None:intergenic 20.0%
!! ATACTATATAAGATGAAGAA+AGG + chr5_1:62434728-62434747 None:intergenic 20.0%
!! ATGTACACAAATTCAATTTA+AGG + chr5_1:62434768-62434787 None:intergenic 20.0%
!! AAACAATATAACTGAAATAG+TGG - chr5_1:62435057-62435076 Msa0742510:intron 20.0%
!! AATACAATGTTCAAGTATTT+AGG - chr5_1:62435170-62435189 Msa0742510:intron 20.0%
!! ATTTGGAAACAAAATATGTT+TGG - chr5_1:62435216-62435235 Msa0742510:intron 20.0%
!! TTTGGAAACAAAATATGTTT+GGG - chr5_1:62435217-62435236 Msa0742510:intron 20.0%
!! AAATATGTTTGGGTAAAATA+CGG - chr5_1:62435227-62435246 Msa0742510:intron 20.0%
!!! CTTAAAACTTTTTCAAGATT+GGG + chr5_1:62435269-62435288 None:intergenic 20.0%
!!! CAATCTTGAAAAAGTTTTAA+GGG - chr5_1:62435268-62435287 Msa0742510:intron 20.0%
!!! AAATGTATTTATGTGGTTTT+TGG + chr5_1:62435297-62435316 None:intergenic 20.0%
!! AATCAGAAAATGTATTTATG+TGG + chr5_1:62435304-62435323 None:intergenic 20.0%
!!! TTTAGAATTTCAAAAGTTTG+AGG + chr5_1:62435963-62435982 None:intergenic 20.0%
!! TATATAATGAAAAAGCAACT+GGG + chr5_1:62436230-62436249 None:intergenic 20.0%
!!! TTTGATTGATGATAGAAAAT+TGG - chr5_1:62436275-62436294 Msa0742510:five_prime_UTR 20.0%
!!! TTGATTGATGATAGAAAATT+GGG - chr5_1:62436276-62436295 Msa0742510:five_prime_UTR 20.0%
!!! TAATTGTTTTACTTTGTTTG+TGG - chr5_1:62436301-62436320 Msa0742510:five_prime_UTR 20.0%
!!! AATTGTTTTACTTTGTTTGT+GGG - chr5_1:62436302-62436321 Msa0742510:five_prime_UTR 20.0%
!! AAAAGGGTTAATTAAGTAAA+TGG + chr5_1:62432434-62432453 None:intergenic 20.0%
!!! AAATTTGCATTTTTTCTTCA+TGG - chr5_1:62432738-62432757 Msa0742510:intron 20.0%
!! CATCAATAAAAATAGGAATT+GGG + chr5_1:62432855-62432874 None:intergenic 20.0%
!! TACATTGCATCAATAAAAAT+AGG + chr5_1:62432862-62432881 None:intergenic 20.0%
!! CATCAATAAAAATAAGAACT+GGG + chr5_1:62433113-62433132 None:intergenic 20.0%
!!! TGTGATTGATATTGATTTTA+TGG - chr5_1:62433214-62433233 Msa0742510:intron 20.0%
!! TTCTTTAGCAAGAAAATTTA+AGG - chr5_1:62433609-62433628 Msa0742510:intron 20.0%
!! ATGGTTTATTCAAAATAAGA+AGG - chr5_1:62433971-62433990 Msa0742510:intron 20.0%
!! TGGTTTATTCAAAATAAGAA+GGG - chr5_1:62433972-62433991 Msa0742510:intron 20.0%
!!! GTGTTAATTTTTTGATAGAA+AGG - chr5_1:62434179-62434198 Msa0742510:intron 20.0%
!!! TTAATTTTTTGATAGAAAGG+TGG - chr5_1:62434182-62434201 Msa0742510:intron 20.0%
!!! TTTATTTTCTTGGTTACAAA+AGG + chr5_1:62434432-62434451 None:intergenic 20.0%
!!! AATGGAAAACTTTATTTTCT+TGG + chr5_1:62434442-62434461 None:intergenic 20.0%
!! AACAAATGTTGTTCATTAAT+AGG - chr5_1:62434493-62434512 Msa0742510:intron 20.0%
!! TACTATATAAGATGAAGAAA+GGG + chr5_1:62434727-62434746 None:intergenic 20.0%
!! ATACTATATAAGATGAAGAA+AGG + chr5_1:62434728-62434747 None:intergenic 20.0%
!! ATGTACACAAATTCAATTTA+AGG + chr5_1:62434768-62434787 None:intergenic 20.0%
!! AAACAATATAACTGAAATAG+TGG - chr5_1:62435057-62435076 Msa0742510:intron 20.0%
!! AATACAATGTTCAAGTATTT+AGG - chr5_1:62435170-62435189 Msa0742510:intron 20.0%
!! ATTTGGAAACAAAATATGTT+TGG - chr5_1:62435216-62435235 Msa0742510:intron 20.0%
!! TTTGGAAACAAAATATGTTT+GGG - chr5_1:62435217-62435236 Msa0742510:intron 20.0%
!! AAATATGTTTGGGTAAAATA+CGG - chr5_1:62435227-62435246 Msa0742510:intron 20.0%
!!! CTTAAAACTTTTTCAAGATT+GGG + chr5_1:62435269-62435288 None:intergenic 20.0%
!!! CAATCTTGAAAAAGTTTTAA+GGG - chr5_1:62435268-62435287 Msa0742510:intron 20.0%
!!! AAATGTATTTATGTGGTTTT+TGG + chr5_1:62435297-62435316 None:intergenic 20.0%
!! AATCAGAAAATGTATTTATG+TGG + chr5_1:62435304-62435323 None:intergenic 20.0%
!!! TTTAGAATTTCAAAAGTTTG+AGG + chr5_1:62435963-62435982 None:intergenic 20.0%
!! TATATAATGAAAAAGCAACT+GGG + chr5_1:62436230-62436249 None:intergenic 20.0%
!!! TTTGATTGATGATAGAAAAT+TGG - chr5_1:62436275-62436294 Msa0742510:five_prime_UTR 20.0%
!!! TTGATTGATGATAGAAAATT+GGG - chr5_1:62436276-62436295 Msa0742510:five_prime_UTR 20.0%
!!! TAATTGTTTTACTTTGTTTG+TGG - chr5_1:62436301-62436320 Msa0742510:five_prime_UTR 20.0%
!!! AATTGTTTTACTTTGTTTGT+GGG - chr5_1:62436302-62436321 Msa0742510:five_prime_UTR 20.0%
!!! TATTGGAGTTTTTTCTTGTT+TGG + chr5_1:62432486-62432505 None:intergenic 25.0%
!! GTGAAAAGAAAAGAAAGTAT+TGG + chr5_1:62432503-62432522 None:intergenic 25.0%
! AATTCAATACACAATCAGAT+TGG + chr5_1:62432795-62432814 None:intergenic 25.0%
! GCATCAATAAAAATAGGAAT+TGG + chr5_1:62432856-62432875 None:intergenic 25.0%
! CATCAATAAAAATAAGAGCT+GGG + chr5_1:62432959-62432978 None:intergenic 25.0%
! TCATCAATAAAAATAAGAGC+TGG + chr5_1:62432960-62432979 None:intergenic 25.0%
! CATCAACAAAAATAGGAATT+GGG + chr5_1:62433011-62433030 None:intergenic 25.0%
!!! ATGCAAAGTTTTGATATTTG+AGG - chr5_1:62433083-62433102 Msa0742510:intron 25.0%
! GCATCAATAAAAATAAGAAC+TGG + chr5_1:62433114-62433133 None:intergenic 25.0%
!! TGCAATCTAATTTTCATCAA+TGG - chr5_1:62433265-62433284 Msa0742510:intron 25.0%
!! GCAATCTAATTTTCATCAAT+GGG - chr5_1:62433266-62433285 Msa0742510:intron 25.0%
! AAAATACATTGACCAAATTG+TGG + chr5_1:62433401-62433420 None:intergenic 25.0%
! TTTATTTATTCCTCCAACAT+TGG - chr5_1:62433435-62433454 Msa0742510:intron 25.0%
!! ACTAATTTGTATACCAATGT+TGG + chr5_1:62433451-62433470 None:intergenic 25.0%
! GTAAAATAACTTCTGAACAT+GGG + chr5_1:62433576-62433595 None:intergenic 25.0%
! AGTAAAATAACTTCTGAACA+TGG + chr5_1:62433577-62433596 None:intergenic 25.0%
! GATACAATCAAAGAAAAACA+AGG + chr5_1:62433792-62433811 None:intergenic 25.0%
! ACGAAGTTTCAAATACTAAA+GGG + chr5_1:62433897-62433916 None:intergenic 25.0%
!! TTTAGTATTTGAAACTTCGT+CGG - chr5_1:62433897-62433916 Msa0742510:intron 25.0%
! AATTAATGGTTTCTGATTGA+TGG - chr5_1:62433952-62433971 Msa0742510:intron 25.0%
! TTTATTCAAAATAAGAAGGG+TGG - chr5_1:62433975-62433994 Msa0742510:intron 25.0%
!! ACACAAATTCAATTTAAGGT+GGG + chr5_1:62434764-62434783 None:intergenic 25.0%
! TACACAAATTCAATTTAAGG+TGG + chr5_1:62434765-62434784 None:intergenic 25.0%
!!! TACAAAAAAGTGTCCATAAT+TGG + chr5_1:62434808-62434827 None:intergenic 25.0%
! ACAATTTATTGCAAGTACAA+AGG + chr5_1:62434918-62434937 None:intergenic 25.0%
! CAACATTAAAACAATTAGCA+CGG + chr5_1:62435012-62435031 None:intergenic 25.0%
! CCTATAGAAGATAAGAAAAT+CGG - chr5_1:62435095-62435114 Msa0742510:intron 25.0%
! CTATAGAAGATAAGAAAATC+GGG - chr5_1:62435096-62435115 Msa0742510:intron 25.0%
!!! CCTTAAAACTTTTTCAAGAT+TGG + chr5_1:62435270-62435289 None:intergenic 25.0%
!! CCAATCTTGAAAAAGTTTTA+AGG - chr5_1:62435267-62435286 Msa0742510:intron 25.0%
!! TTTTGTTGAGATATAGCTTT+TGG - chr5_1:62435729-62435748 Msa0742510:intron 25.0%
!! TTTGTTGAGATATAGCTTTT+GGG - chr5_1:62435730-62435749 Msa0742510:intron 25.0%
! TGGAAAAGTTTGTAAAAAAG+AGG + chr5_1:62436100-62436119 None:intergenic 25.0%
! CTATATAATGAAAAAGCAAC+TGG + chr5_1:62436231-62436250 None:intergenic 25.0%
!!! ATTGTTTTACTTTGTTTGTG+GGG - chr5_1:62436303-62436322 Msa0742510:five_prime_UTR 25.0%
! AAAGCAAAAAGATAGAACAA+AGG + chr5_1:62436356-62436375 None:intergenic 25.0%
!!! TATTGGAGTTTTTTCTTGTT+TGG + chr5_1:62432486-62432505 None:intergenic 25.0%
!! GTGAAAAGAAAAGAAAGTAT+TGG + chr5_1:62432503-62432522 None:intergenic 25.0%
! AATTCAATACACAATCAGAT+TGG + chr5_1:62432795-62432814 None:intergenic 25.0%
! GCATCAATAAAAATAGGAAT+TGG + chr5_1:62432856-62432875 None:intergenic 25.0%
! CATCAATAAAAATAAGAGCT+GGG + chr5_1:62432959-62432978 None:intergenic 25.0%
! TCATCAATAAAAATAAGAGC+TGG + chr5_1:62432960-62432979 None:intergenic 25.0%
! CATCAACAAAAATAGGAATT+GGG + chr5_1:62433011-62433030 None:intergenic 25.0%
!!! ATGCAAAGTTTTGATATTTG+AGG - chr5_1:62433083-62433102 Msa0742510:intron 25.0%
! GCATCAATAAAAATAAGAAC+TGG + chr5_1:62433114-62433133 None:intergenic 25.0%
!! TGCAATCTAATTTTCATCAA+TGG - chr5_1:62433265-62433284 Msa0742510:intron 25.0%
!! GCAATCTAATTTTCATCAAT+GGG - chr5_1:62433266-62433285 Msa0742510:intron 25.0%
! AAAATACATTGACCAAATTG+TGG + chr5_1:62433401-62433420 None:intergenic 25.0%
! TTTATTTATTCCTCCAACAT+TGG - chr5_1:62433435-62433454 Msa0742510:intron 25.0%
!! ACTAATTTGTATACCAATGT+TGG + chr5_1:62433451-62433470 None:intergenic 25.0%
! GTAAAATAACTTCTGAACAT+GGG + chr5_1:62433576-62433595 None:intergenic 25.0%
! AGTAAAATAACTTCTGAACA+TGG + chr5_1:62433577-62433596 None:intergenic 25.0%
! GATACAATCAAAGAAAAACA+AGG + chr5_1:62433792-62433811 None:intergenic 25.0%
! ACGAAGTTTCAAATACTAAA+GGG + chr5_1:62433897-62433916 None:intergenic 25.0%
!! TTTAGTATTTGAAACTTCGT+CGG - chr5_1:62433897-62433916 Msa0742510:intron 25.0%
! AATTAATGGTTTCTGATTGA+TGG - chr5_1:62433952-62433971 Msa0742510:intron 25.0%
! TTTATTCAAAATAAGAAGGG+TGG - chr5_1:62433975-62433994 Msa0742510:intron 25.0%
!! ACACAAATTCAATTTAAGGT+GGG + chr5_1:62434764-62434783 None:intergenic 25.0%
! TACACAAATTCAATTTAAGG+TGG + chr5_1:62434765-62434784 None:intergenic 25.0%
!!! TACAAAAAAGTGTCCATAAT+TGG + chr5_1:62434808-62434827 None:intergenic 25.0%
! ACAATTTATTGCAAGTACAA+AGG + chr5_1:62434918-62434937 None:intergenic 25.0%
! CAACATTAAAACAATTAGCA+CGG + chr5_1:62435012-62435031 None:intergenic 25.0%
! CCTATAGAAGATAAGAAAAT+CGG - chr5_1:62435095-62435114 Msa0742510:intron 25.0%
! CTATAGAAGATAAGAAAATC+GGG - chr5_1:62435096-62435115 Msa0742510:intron 25.0%
!!! CCTTAAAACTTTTTCAAGAT+TGG + chr5_1:62435270-62435289 None:intergenic 25.0%
!! CCAATCTTGAAAAAGTTTTA+AGG - chr5_1:62435267-62435286 Msa0742510:intron 25.0%
!! TTTTGTTGAGATATAGCTTT+TGG - chr5_1:62435729-62435748 Msa0742510:intron 25.0%
!! TTTGTTGAGATATAGCTTTT+GGG - chr5_1:62435730-62435749 Msa0742510:intron 25.0%
! TGGAAAAGTTTGTAAAAAAG+AGG + chr5_1:62436100-62436119 None:intergenic 25.0%
! CTATATAATGAAAAAGCAAC+TGG + chr5_1:62436231-62436250 None:intergenic 25.0%
!!! ATTGTTTTACTTTGTTTGTG+GGG - chr5_1:62436303-62436322 Msa0742510:five_prime_UTR 25.0%
! AAAGCAAAAAGATAGAACAA+AGG + chr5_1:62436356-62436375 None:intergenic 25.0%
ACACGAAATTGATGAACAAA+TGG + chr5_1:62432579-62432598 None:intergenic 30.0%
!! TTTTCTCAGAATCTGGAATT+GGG + chr5_1:62432618-62432637 None:intergenic 30.0%
!! TTTTTCTCAGAATCTGGAAT+TGG + chr5_1:62432619-62432638 None:intergenic 30.0%
!!! GCATTTTTTTTCTCAGAATC+TGG + chr5_1:62432625-62432644 None:intergenic 30.0%
TCTTCTTTGACAACGTAAAA+TGG + chr5_1:62432662-62432681 None:intergenic 30.0%
TTCTAACAATTGCGAAATGA+AGG + chr5_1:62432716-62432735 None:intergenic 30.0%
ATCAACAAAAAAAGGGAACT+GGG + chr5_1:62432907-62432926 None:intergenic 30.0%
GCATTGCATCAACAAAAAAA+GGG + chr5_1:62432914-62432933 None:intergenic 30.0%
TGCATTGCATCAACAAAAAA+AGG + chr5_1:62432915-62432934 None:intergenic 30.0%
GCATCAACAAAAATAGGAAT+TGG + chr5_1:62433012-62433031 None:intergenic 30.0%
TGCAATGCATCAACAAAAAT+AGG + chr5_1:62433018-62433037 None:intergenic 30.0%
TGCATTGCATCAACAAAAAT+GGG + chr5_1:62433068-62433087 None:intergenic 30.0%
TTGCATTGCATCAACAAAAA+TGG + chr5_1:62432916-62432935 None:intergenic 30.0%
! TTTTATGTGGCAAGATTGAT+AGG - chr5_1:62433241-62433260 Msa0742510:intron 30.0%
AATTTGTATACCAATGTTGG+AGG + chr5_1:62433448-62433467 None:intergenic 30.0%
AGTTATTAAACACGCACTTA+AGG - chr5_1:62433501-62433520 Msa0742510:intron 30.0%
AATCAAAGAAAAACAAGGCT+GGG + chr5_1:62433787-62433806 None:intergenic 30.0%
GACGAAGTTTCAAATACTAA+AGG + chr5_1:62433898-62433917 None:intergenic 30.0%
TCCCTAACATCTTAATATCA+GGG - chr5_1:62433925-62433944 Msa0742510:intron 30.0%
TCCCTGATATTAAGATGTTA+GGG + chr5_1:62433929-62433948 None:intergenic 30.0%
AATATCAGGGACTGAATTAA+TGG - chr5_1:62433938-62433957 Msa0742510:intron 30.0%
AATAAGAAGGGTGGTAAAAA+TGG - chr5_1:62433984-62434003 Msa0742510:intron 30.0%
!! TGACATAGGTTATTTTACCT+GGG + chr5_1:62434313-62434332 None:intergenic 30.0%
!! TTGACATAGGTTATTTTACC+TGG + chr5_1:62434314-62434333 None:intergenic 30.0%
ACCTATGTCAAACTTTAACA+AGG - chr5_1:62434323-62434342 Msa0742510:CDS 30.0%
TAAATGAACAGCTGTAGATT+AGG + chr5_1:62434378-62434397 None:intergenic 30.0%
GAAAGGAAATCTAATATCTG+TGG + chr5_1:62434410-62434429 None:intergenic 30.0%
TTTCTTGGTTACAAAAGGAA+AGG + chr5_1:62434427-62434446 None:intergenic 30.0%
TCATAGAATCAGAATCAGAT+AGG - chr5_1:62434672-62434691 Msa0742510:CDS 30.0%
GTGATATCAAACTCCAATTA+TGG - chr5_1:62434792-62434811 Msa0742510:intron 30.0%
TGAGATGGAAAATATTCTCT+TGG - chr5_1:62434828-62434847 Msa0742510:intron 30.0%
! CCGATTTTCTTATCTTCTAT+AGG + chr5_1:62435098-62435117 None:intergenic 30.0%
GGAAAGAATAGTATAAACTC+TGG - chr5_1:62435117-62435136 Msa0742510:intron 30.0%
ACAATGTTCAAGTATTTAGG+TGG - chr5_1:62435173-62435192 Msa0742510:intron 30.0%
! TCAAGTATTTAGGTGGTTTT+TGG - chr5_1:62435180-62435199 Msa0742510:intron 30.0%
AGAAAAAATCAACGCAAACA+GGG + chr5_1:62435682-62435701 None:intergenic 30.0%
AAGAAAAAATCAACGCAAAC+AGG + chr5_1:62435683-62435702 None:intergenic 30.0%
!!! TGCGTTGATTTTTTCTTACT+TGG - chr5_1:62435686-62435705 Msa0742510:intron 30.0%
! TTGTTGAGATATAGCTTTTG+GGG - chr5_1:62435731-62435750 Msa0742510:intron 30.0%
ACACAACAAAAATATGCAGA+AGG + chr5_1:62435774-62435793 None:intergenic 30.0%
!! TGCATATTTTTGTTGTGTGT+GGG - chr5_1:62435776-62435795 Msa0742510:intron 30.0%
! AACTGTTTTGCATTACAACA+AGG + chr5_1:62435803-62435822 None:intergenic 30.0%
! CATAATGGAAGCCTTAATTA+GGG + chr5_1:62435875-62435894 None:intergenic 30.0%
! TCATAATGGAAGCCTTAATT+AGG + chr5_1:62435876-62435895 None:intergenic 30.0%
CAAAATCATGCAGAGATAAT+TGG + chr5_1:62436120-62436139 None:intergenic 30.0%
ACACGAAATTGATGAACAAA+TGG + chr5_1:62432579-62432598 None:intergenic 30.0%
!! TTTTCTCAGAATCTGGAATT+GGG + chr5_1:62432618-62432637 None:intergenic 30.0%
!! TTTTTCTCAGAATCTGGAAT+TGG + chr5_1:62432619-62432638 None:intergenic 30.0%
!!! GCATTTTTTTTCTCAGAATC+TGG + chr5_1:62432625-62432644 None:intergenic 30.0%
TCTTCTTTGACAACGTAAAA+TGG + chr5_1:62432662-62432681 None:intergenic 30.0%
TTCTAACAATTGCGAAATGA+AGG + chr5_1:62432716-62432735 None:intergenic 30.0%
ATCAACAAAAAAAGGGAACT+GGG + chr5_1:62432907-62432926 None:intergenic 30.0%
GCATTGCATCAACAAAAAAA+GGG + chr5_1:62432914-62432933 None:intergenic 30.0%
TGCATTGCATCAACAAAAAA+AGG + chr5_1:62432915-62432934 None:intergenic 30.0%
GCATCAACAAAAATAGGAAT+TGG + chr5_1:62433012-62433031 None:intergenic 30.0%
TGCAATGCATCAACAAAAAT+AGG + chr5_1:62433018-62433037 None:intergenic 30.0%
TGCATTGCATCAACAAAAAT+GGG + chr5_1:62433068-62433087 None:intergenic 30.0%
TTGCATTGCATCAACAAAAA+TGG + chr5_1:62432916-62432935 None:intergenic 30.0%
! TTTTATGTGGCAAGATTGAT+AGG - chr5_1:62433241-62433260 Msa0742510:intron 30.0%
AATTTGTATACCAATGTTGG+AGG + chr5_1:62433448-62433467 None:intergenic 30.0%
AGTTATTAAACACGCACTTA+AGG - chr5_1:62433501-62433520 Msa0742510:intron 30.0%
AATCAAAGAAAAACAAGGCT+GGG + chr5_1:62433787-62433806 None:intergenic 30.0%
GACGAAGTTTCAAATACTAA+AGG + chr5_1:62433898-62433917 None:intergenic 30.0%
TCCCTAACATCTTAATATCA+GGG - chr5_1:62433925-62433944 Msa0742510:intron 30.0%
TCCCTGATATTAAGATGTTA+GGG + chr5_1:62433929-62433948 None:intergenic 30.0%
AATATCAGGGACTGAATTAA+TGG - chr5_1:62433938-62433957 Msa0742510:intron 30.0%
AATAAGAAGGGTGGTAAAAA+TGG - chr5_1:62433984-62434003 Msa0742510:intron 30.0%
!! TGACATAGGTTATTTTACCT+GGG + chr5_1:62434313-62434332 None:intergenic 30.0%
!! TTGACATAGGTTATTTTACC+TGG + chr5_1:62434314-62434333 None:intergenic 30.0%
ACCTATGTCAAACTTTAACA+AGG - chr5_1:62434323-62434342 Msa0742510:CDS 30.0%
TAAATGAACAGCTGTAGATT+AGG + chr5_1:62434378-62434397 None:intergenic 30.0%
GAAAGGAAATCTAATATCTG+TGG + chr5_1:62434410-62434429 None:intergenic 30.0%
TTTCTTGGTTACAAAAGGAA+AGG + chr5_1:62434427-62434446 None:intergenic 30.0%
TCATAGAATCAGAATCAGAT+AGG - chr5_1:62434672-62434691 Msa0742510:CDS 30.0%
GTGATATCAAACTCCAATTA+TGG - chr5_1:62434792-62434811 Msa0742510:intron 30.0%
TGAGATGGAAAATATTCTCT+TGG - chr5_1:62434828-62434847 Msa0742510:intron 30.0%
! CCGATTTTCTTATCTTCTAT+AGG + chr5_1:62435098-62435117 None:intergenic 30.0%
GGAAAGAATAGTATAAACTC+TGG - chr5_1:62435117-62435136 Msa0742510:intron 30.0%
ACAATGTTCAAGTATTTAGG+TGG - chr5_1:62435173-62435192 Msa0742510:intron 30.0%
! TCAAGTATTTAGGTGGTTTT+TGG - chr5_1:62435180-62435199 Msa0742510:intron 30.0%
AGAAAAAATCAACGCAAACA+GGG + chr5_1:62435682-62435701 None:intergenic 30.0%
AAGAAAAAATCAACGCAAAC+AGG + chr5_1:62435683-62435702 None:intergenic 30.0%
!!! TGCGTTGATTTTTTCTTACT+TGG - chr5_1:62435686-62435705 Msa0742510:intron 30.0%
! TTGTTGAGATATAGCTTTTG+GGG - chr5_1:62435731-62435750 Msa0742510:intron 30.0%
ACACAACAAAAATATGCAGA+AGG + chr5_1:62435774-62435793 None:intergenic 30.0%
!! TGCATATTTTTGTTGTGTGT+GGG - chr5_1:62435776-62435795 Msa0742510:intron 30.0%
! AACTGTTTTGCATTACAACA+AGG + chr5_1:62435803-62435822 None:intergenic 30.0%
! CATAATGGAAGCCTTAATTA+GGG + chr5_1:62435875-62435894 None:intergenic 30.0%
! TCATAATGGAAGCCTTAATT+AGG + chr5_1:62435876-62435895 None:intergenic 30.0%
CAAAATCATGCAGAGATAAT+TGG + chr5_1:62436120-62436139 None:intergenic 30.0%
!! AACGAACACTAAGCTTTGTT+TGG + chr5_1:62432549-62432568 None:intergenic 35.0%
ATTGATGAACAAATGGAGGA+AGG + chr5_1:62432572-62432591 None:intergenic 35.0%
CGAAATTGATGAACAAATGG+AGG + chr5_1:62432576-62432595 None:intergenic 35.0%
TAAAATGGATCTTGAGCTGA+GGG + chr5_1:62432647-62432666 None:intergenic 35.0%
TGGATCATGCAATAAAGTGA+TGG + chr5_1:62432775-62432794 None:intergenic 35.0%
CATCAACAAAAAAAGGGAAC+TGG + chr5_1:62432908-62432927 None:intergenic 35.0%
CATCAACAAAAATGGGAACT+GGG + chr5_1:62433061-62433080 None:intergenic 35.0%
CATAGTTACAGATCAGAACT+GGG + chr5_1:62433167-62433186 None:intergenic 35.0%
TCATAGTTACAGATCAGAAC+TGG + chr5_1:62433168-62433187 None:intergenic 35.0%
TGAGCATTTGAACCTTTCAA+AGG - chr5_1:62433308-62433327 Msa0742510:intron 35.0%
TACATTGACCAAATTGTGGA+AGG + chr5_1:62433397-62433416 None:intergenic 35.0%
ACTTAAGGTATGTCTGAGTT+TGG - chr5_1:62433516-62433535 Msa0742510:intron 35.0%
ATCAAAGAAAAACAAGGCTG+GGG + chr5_1:62433786-62433805 None:intergenic 35.0%
CAATCAAAGAAAAACAAGGC+TGG + chr5_1:62433788-62433807 None:intergenic 35.0%
GTCCCTAACATCTTAATATC+AGG - chr5_1:62433924-62433943 Msa0742510:intron 35.0%
GTCCCTGATATTAAGATGTT+AGG + chr5_1:62433930-62433949 None:intergenic 35.0%
ATGGAGTCTAGTGAAAATGT+TGG - chr5_1:62434003-62434022 Msa0742510:intron 35.0%
TGAACATGTGTGATAAAGAG+AGG + chr5_1:62434095-62434114 None:intergenic 35.0%
AGCATTGCTAATATTTGACG+TGG - chr5_1:62434114-62434133 Msa0742510:intron 35.0%
AGTTTGAACAGATTGTATCG+CGG + chr5_1:62434151-62434170 None:intergenic 35.0%
TGATAGAAAGGTGGATGAAT+TGG - chr5_1:62434191-62434210 Msa0742510:intron 35.0%
ATGAAGTGGAGATTGAAAAC+CGG - chr5_1:62434262-62434281 Msa0742510:CDS 35.0%
! GCCTTGTTAAAGTTTGACAT+AGG + chr5_1:62434327-62434346 None:intergenic 35.0%
GTCAAACTTTAACAAGGCTA+AGG - chr5_1:62434329-62434348 Msa0742510:CDS 35.0%
ACAACTCATGCTAGTATAAG+TGG - chr5_1:62434563-62434582 Msa0742510:intron 35.0%
CAACTCATGCTAGTATAAGT+GGG - chr5_1:62434564-62434583 Msa0742510:intron 35.0%
!!! GGACACTTTTTTGTATGAGA+TGG - chr5_1:62434813-62434832 Msa0742510:intron 35.0%
TATAATGCACTCTGCTTAAG+AGG + chr5_1:62434869-62434888 None:intergenic 35.0%
AGTACAAAGGATCTTACATC+TGG + chr5_1:62434905-62434924 None:intergenic 35.0%
! AACAATTAGCACGGATTACA+AGG + chr5_1:62435003-62435022 None:intergenic 35.0%
AGACTGAGAAACTGTATTGA+AGG + chr5_1:62435627-62435646 None:intergenic 35.0%
TATCTCAACAAAAGAAGCCA+CGG + chr5_1:62435722-62435741 None:intergenic 35.0%
! TGTTGAGATATAGCTTTTGG+GGG - chr5_1:62435732-62435751 Msa0742510:intron 35.0%
!! CTGCATATTTTTGTTGTGTG+TGG - chr5_1:62435775-62435794 Msa0742510:intron 35.0%
TAATGCAAAACAGTTGCTGT+TGG - chr5_1:62435808-62435827 Msa0742510:intron 35.0%
! AATGCAAAACAGTTGCTGTT+GGG - chr5_1:62435809-62435828 Msa0742510:intron 35.0%
TTAAGGCTTCCATTATGAGT+TGG - chr5_1:62435878-62435897 Msa0742510:intron 35.0%
! TTCAAAAGTTTGAGGTGCAT+GGG + chr5_1:62435955-62435974 None:intergenic 35.0%
! TTTCAAAAGTTTGAGGTGCA+TGG + chr5_1:62435956-62435975 None:intergenic 35.0%
CTCTTTACTACACTGTTGAA+TGG - chr5_1:62436167-62436186 Msa0742510:intron 35.0%
TACTGTTGAAAATCAACTGC+AGG + chr5_1:62436203-62436222 None:intergenic 35.0%
!! TTTTACTTTGTTTGTGGGGT+TGG - chr5_1:62436307-62436326 Msa0742510:five_prime_UTR 35.0%
! TTTACTTTGTTTGTGGGGTT+GGG - chr5_1:62436308-62436327 Msa0742510:five_prime_UTR 35.0%
!! AACGAACACTAAGCTTTGTT+TGG + chr5_1:62432549-62432568 None:intergenic 35.0%
ATTGATGAACAAATGGAGGA+AGG + chr5_1:62432572-62432591 None:intergenic 35.0%
CGAAATTGATGAACAAATGG+AGG + chr5_1:62432576-62432595 None:intergenic 35.0%
TAAAATGGATCTTGAGCTGA+GGG + chr5_1:62432647-62432666 None:intergenic 35.0%
TGGATCATGCAATAAAGTGA+TGG + chr5_1:62432775-62432794 None:intergenic 35.0%
CATCAACAAAAAAAGGGAAC+TGG + chr5_1:62432908-62432927 None:intergenic 35.0%
CATCAACAAAAATGGGAACT+GGG + chr5_1:62433061-62433080 None:intergenic 35.0%
CATAGTTACAGATCAGAACT+GGG + chr5_1:62433167-62433186 None:intergenic 35.0%
TCATAGTTACAGATCAGAAC+TGG + chr5_1:62433168-62433187 None:intergenic 35.0%
TGAGCATTTGAACCTTTCAA+AGG - chr5_1:62433308-62433327 Msa0742510:intron 35.0%
TACATTGACCAAATTGTGGA+AGG + chr5_1:62433397-62433416 None:intergenic 35.0%
ACTTAAGGTATGTCTGAGTT+TGG - chr5_1:62433516-62433535 Msa0742510:intron 35.0%
ATCAAAGAAAAACAAGGCTG+GGG + chr5_1:62433786-62433805 None:intergenic 35.0%
CAATCAAAGAAAAACAAGGC+TGG + chr5_1:62433788-62433807 None:intergenic 35.0%
GTCCCTAACATCTTAATATC+AGG - chr5_1:62433924-62433943 Msa0742510:intron 35.0%
GTCCCTGATATTAAGATGTT+AGG + chr5_1:62433930-62433949 None:intergenic 35.0%
ATGGAGTCTAGTGAAAATGT+TGG - chr5_1:62434003-62434022 Msa0742510:intron 35.0%
TGAACATGTGTGATAAAGAG+AGG + chr5_1:62434095-62434114 None:intergenic 35.0%
AGCATTGCTAATATTTGACG+TGG - chr5_1:62434114-62434133 Msa0742510:intron 35.0%
AGTTTGAACAGATTGTATCG+CGG + chr5_1:62434151-62434170 None:intergenic 35.0%
TGATAGAAAGGTGGATGAAT+TGG - chr5_1:62434191-62434210 Msa0742510:intron 35.0%
ATGAAGTGGAGATTGAAAAC+CGG - chr5_1:62434262-62434281 Msa0742510:CDS 35.0%
! GCCTTGTTAAAGTTTGACAT+AGG + chr5_1:62434327-62434346 None:intergenic 35.0%
GTCAAACTTTAACAAGGCTA+AGG - chr5_1:62434329-62434348 Msa0742510:CDS 35.0%
ACAACTCATGCTAGTATAAG+TGG - chr5_1:62434563-62434582 Msa0742510:intron 35.0%
CAACTCATGCTAGTATAAGT+GGG - chr5_1:62434564-62434583 Msa0742510:intron 35.0%
!!! GGACACTTTTTTGTATGAGA+TGG - chr5_1:62434813-62434832 Msa0742510:intron 35.0%
TATAATGCACTCTGCTTAAG+AGG + chr5_1:62434869-62434888 None:intergenic 35.0%
AGTACAAAGGATCTTACATC+TGG + chr5_1:62434905-62434924 None:intergenic 35.0%
! AACAATTAGCACGGATTACA+AGG + chr5_1:62435003-62435022 None:intergenic 35.0%
AGACTGAGAAACTGTATTGA+AGG + chr5_1:62435627-62435646 None:intergenic 35.0%
TATCTCAACAAAAGAAGCCA+CGG + chr5_1:62435722-62435741 None:intergenic 35.0%
! TGTTGAGATATAGCTTTTGG+GGG - chr5_1:62435732-62435751 Msa0742510:intron 35.0%
!! CTGCATATTTTTGTTGTGTG+TGG - chr5_1:62435775-62435794 Msa0742510:intron 35.0%
TAATGCAAAACAGTTGCTGT+TGG - chr5_1:62435808-62435827 Msa0742510:intron 35.0%
! AATGCAAAACAGTTGCTGTT+GGG - chr5_1:62435809-62435828 Msa0742510:intron 35.0%
TTAAGGCTTCCATTATGAGT+TGG - chr5_1:62435878-62435897 Msa0742510:intron 35.0%
! TTCAAAAGTTTGAGGTGCAT+GGG + chr5_1:62435955-62435974 None:intergenic 35.0%
! TTTCAAAAGTTTGAGGTGCA+TGG + chr5_1:62435956-62435975 None:intergenic 35.0%
CTCTTTACTACACTGTTGAA+TGG - chr5_1:62436167-62436186 Msa0742510:intron 35.0%
TACTGTTGAAAATCAACTGC+AGG + chr5_1:62436203-62436222 None:intergenic 35.0%
!! TTTTACTTTGTTTGTGGGGT+TGG - chr5_1:62436307-62436326 Msa0742510:five_prime_UTR 35.0%
! TTTACTTTGTTTGTGGGGTT+GGG - chr5_1:62436308-62436327 Msa0742510:five_prime_UTR 35.0%
! TCTGGAATTGGGAATTGGAA+TGG + chr5_1:62432607-62432626 None:intergenic 40.0%
! CAGAATCTGGAATTGGGAAT+TGG + chr5_1:62432612-62432631 None:intergenic 40.0%
GTAAAATGGATCTTGAGCTG+AGG + chr5_1:62432648-62432667 None:intergenic 40.0%
GCATCAACAAAAATGGGAAC+TGG + chr5_1:62433062-62433081 None:intergenic 40.0%
TGGGAAAACACTTCTGATAC+TGG - chr5_1:62433285-62433304 Msa0742510:intron 40.0%
CAGCAAGAACTTCCTTTGAA+AGG + chr5_1:62433323-62433342 None:intergenic 40.0%
TAGTGAAGCCTTCCACAATT+TGG - chr5_1:62433386-62433405 Msa0742510:intron 40.0%
TTATCATCGCTTGCATGAAC+TGG - chr5_1:62433470-62433489 Msa0742510:intron 40.0%
TATCATCGCTTGCATGAACT+GGG - chr5_1:62433471-62433490 Msa0742510:intron 40.0%
GGAGTTTAATCTAGATCAGC+CGG - chr5_1:62433537-62433556 Msa0742510:intron 40.0%
! TTTTCACCTTTCCTACCACA+GGG + chr5_1:62433819-62433838 None:intergenic 40.0%
! TTTTTCACCTTTCCTACCAC+AGG + chr5_1:62433820-62433839 None:intergenic 40.0%
TAGCATCTAGAGATCCTTCT+TGG - chr5_1:62434229-62434248 Msa0742510:CDS 40.0%
TCTAGAGATCCTTCTTGGTA+TGG - chr5_1:62434234-62434253 Msa0742510:CDS 40.0%
TCATCAATGCCATACCAAGA+AGG + chr5_1:62434246-62434265 None:intergenic 40.0%
!! TTGGTATGGCATTGATGAAG+TGG - chr5_1:62434248-62434267 Msa0742510:CDS 40.0%
CAGCAGATAGAGAAAAGGAA+TGG + chr5_1:62434460-62434479 None:intergenic 40.0%
TCATGCAGCAGATAGAGAAA+AGG + chr5_1:62434465-62434484 None:intergenic 40.0%
ATTAAGAGAACAGTGGAAGC+TGG - chr5_1:62434524-62434543 Msa0742510:intron 40.0%
TAGTATAAGTGGGATGCACA+GGG - chr5_1:62434574-62434593 Msa0742510:intron 40.0%
GACGTACTTTGATGAGAATC+TGG + chr5_1:62434614-62434633 None:intergenic 40.0%
AAGTCTAACCAATATGCCTC+TGG - chr5_1:62434635-62434654 Msa0742510:CDS 40.0%
AGTCTAACCAATATGCCTCT+GGG - chr5_1:62434636-62434655 Msa0742510:CDS 40.0%
GAAATCATCATTATCCCCAG+AGG + chr5_1:62434654-62434673 None:intergenic 40.0%
TCAAAAGAGAATACACACGG+TGG + chr5_1:62435366-62435385 None:intergenic 40.0%
GCGTCAAAAGAGAATACACA+CGG + chr5_1:62435369-62435388 None:intergenic 40.0%
GTCCACAATTGTTCCAGTTA+CGG - chr5_1:62435435-62435454 Msa0742510:intron 40.0%
AAAACAATGTCGCACAGGAA+CGG + chr5_1:62435471-62435490 None:intergenic 40.0%
ATCTCAACAAAAGAAGCCAC+GGG + chr5_1:62435721-62435740 None:intergenic 40.0%
! AAAACAGTTGCTGTTGGGTT+GGG - chr5_1:62435814-62435833 Msa0742510:intron 40.0%
TGCATCTCATGTTTAAGCCA+GGG - chr5_1:62435840-62435859 Msa0742510:intron 40.0%
! TTCCATTATGAGTTGGCAGT+AGG - chr5_1:62435885-62435904 Msa0742510:intron 40.0%
! TCCATTATGAGTTGGCAGTA+GGG - chr5_1:62435886-62435905 Msa0742510:intron 40.0%
ATTATGCTCAACAGTGTGAC+TGG - chr5_1:62436019-62436038 Msa0742510:intron 40.0%
! TCTGGAATTGGGAATTGGAA+TGG + chr5_1:62432607-62432626 None:intergenic 40.0%
! CAGAATCTGGAATTGGGAAT+TGG + chr5_1:62432612-62432631 None:intergenic 40.0%
GTAAAATGGATCTTGAGCTG+AGG + chr5_1:62432648-62432667 None:intergenic 40.0%
GCATCAACAAAAATGGGAAC+TGG + chr5_1:62433062-62433081 None:intergenic 40.0%
TGGGAAAACACTTCTGATAC+TGG - chr5_1:62433285-62433304 Msa0742510:intron 40.0%
CAGCAAGAACTTCCTTTGAA+AGG + chr5_1:62433323-62433342 None:intergenic 40.0%
TAGTGAAGCCTTCCACAATT+TGG - chr5_1:62433386-62433405 Msa0742510:intron 40.0%
TTATCATCGCTTGCATGAAC+TGG - chr5_1:62433470-62433489 Msa0742510:intron 40.0%
TATCATCGCTTGCATGAACT+GGG - chr5_1:62433471-62433490 Msa0742510:intron 40.0%
GGAGTTTAATCTAGATCAGC+CGG - chr5_1:62433537-62433556 Msa0742510:intron 40.0%
! TTTTCACCTTTCCTACCACA+GGG + chr5_1:62433819-62433838 None:intergenic 40.0%
! TTTTTCACCTTTCCTACCAC+AGG + chr5_1:62433820-62433839 None:intergenic 40.0%
TAGCATCTAGAGATCCTTCT+TGG - chr5_1:62434229-62434248 Msa0742510:CDS 40.0%
TCTAGAGATCCTTCTTGGTA+TGG - chr5_1:62434234-62434253 Msa0742510:CDS 40.0%
TCATCAATGCCATACCAAGA+AGG + chr5_1:62434246-62434265 None:intergenic 40.0%
!! TTGGTATGGCATTGATGAAG+TGG - chr5_1:62434248-62434267 Msa0742510:CDS 40.0%
CAGCAGATAGAGAAAAGGAA+TGG + chr5_1:62434460-62434479 None:intergenic 40.0%
TCATGCAGCAGATAGAGAAA+AGG + chr5_1:62434465-62434484 None:intergenic 40.0%
ATTAAGAGAACAGTGGAAGC+TGG - chr5_1:62434524-62434543 Msa0742510:intron 40.0%
TAGTATAAGTGGGATGCACA+GGG - chr5_1:62434574-62434593 Msa0742510:intron 40.0%
GACGTACTTTGATGAGAATC+TGG + chr5_1:62434614-62434633 None:intergenic 40.0%
AAGTCTAACCAATATGCCTC+TGG - chr5_1:62434635-62434654 Msa0742510:CDS 40.0%
AGTCTAACCAATATGCCTCT+GGG - chr5_1:62434636-62434655 Msa0742510:CDS 40.0%
GAAATCATCATTATCCCCAG+AGG + chr5_1:62434654-62434673 None:intergenic 40.0%
TCAAAAGAGAATACACACGG+TGG + chr5_1:62435366-62435385 None:intergenic 40.0%
GCGTCAAAAGAGAATACACA+CGG + chr5_1:62435369-62435388 None:intergenic 40.0%
GTCCACAATTGTTCCAGTTA+CGG - chr5_1:62435435-62435454 Msa0742510:intron 40.0%
AAAACAATGTCGCACAGGAA+CGG + chr5_1:62435471-62435490 None:intergenic 40.0%
ATCTCAACAAAAGAAGCCAC+GGG + chr5_1:62435721-62435740 None:intergenic 40.0%
! AAAACAGTTGCTGTTGGGTT+GGG - chr5_1:62435814-62435833 Msa0742510:intron 40.0%
TGCATCTCATGTTTAAGCCA+GGG - chr5_1:62435840-62435859 Msa0742510:intron 40.0%
! TTCCATTATGAGTTGGCAGT+AGG - chr5_1:62435885-62435904 Msa0742510:intron 40.0%
! TCCATTATGAGTTGGCAGTA+GGG - chr5_1:62435886-62435905 Msa0742510:intron 40.0%
ATTATGCTCAACAGTGTGAC+TGG - chr5_1:62436019-62436038 Msa0742510:intron 40.0%
! AAGGAAGTTCTTGCTGCTTG+TGG - chr5_1:62433327-62433346 Msa0742510:intron 45.0%
!! CTGCTTGTGGAAGTATTGAG+TGG - chr5_1:62433340-62433359 Msa0742510:intron 45.0%
!! TTGTGGAAGTATTGAGTGGC+AGG - chr5_1:62433344-62433363 Msa0742510:intron 45.0%
GTTTAATCTAGATCAGCCGG+AGG - chr5_1:62433540-62433559 Msa0742510:intron 45.0%
AAAGAAAAACAAGGCTGGGG+AGG + chr5_1:62433783-62433802 None:intergenic 45.0%
TTGATTGTATCCCTTCCCTG+TGG - chr5_1:62433801-62433820 Msa0742510:intron 45.0%
TAAGTGTGTGCTTGTGGAGT+TGG + chr5_1:62434046-62434065 None:intergenic 45.0%
GTAGACTAAGTGTGTGCTTG+TGG + chr5_1:62434052-62434071 None:intergenic 45.0%
CATGTGTGATAAAGAGAGGC+TGG + chr5_1:62434091-62434110 None:intergenic 45.0%
AAGTGGAGATTGAAAACCGG+AGG - chr5_1:62434265-62434284 Msa0742510:CDS 45.0%
GCGCACAATTAAGAGAACAG+TGG - chr5_1:62434517-62434536 Msa0742510:intron 45.0%
AGAACAGTGGAAGCTGGAAA+GGG - chr5_1:62434530-62434549 Msa0742510:intron 45.0%
CTAGTATAAGTGGGATGCAC+AGG - chr5_1:62434573-62434592 Msa0742510:intron 45.0%
GGATGCACAGGGAATTAATG+AGG - chr5_1:62434585-62434604 Msa0742510:intron 45.0%
GTCTAACCAATATGCCTCTG+GGG - chr5_1:62434637-62434656 Msa0742510:CDS 45.0%
! CATTATCCCCAGAGGCATAT+TGG + chr5_1:62434646-62434665 None:intergenic 45.0%
CAATTGTGGACGAACGGAAA+TGG + chr5_1:62435426-62435445 None:intergenic 45.0%
CTGGAACAATTGTGGACGAA+CGG + chr5_1:62435432-62435451 None:intergenic 45.0%
TGCCGTAACTGGAACAATTG+TGG + chr5_1:62435440-62435459 None:intergenic 45.0%
TTGCGCAACATCGTTTCTGT+CGG - chr5_1:62435490-62435509 Msa0742510:intron 45.0%
AGGAACGTTACTCACAGGAA+AGG + chr5_1:62435521-62435540 None:intergenic 45.0%
GGTCGATACAGTGAAGGTTA+CGG + chr5_1:62435572-62435591 None:intergenic 45.0%
!! TAAAGCGTCGCACACAATGA+AGG + chr5_1:62435601-62435620 None:intergenic 45.0%
TCAACGCAAACAGGGTAACA+TGG + chr5_1:62435674-62435693 None:intergenic 45.0%
TACTTGGCATTGTTATCCCG+TGG - chr5_1:62435702-62435721 Msa0742510:intron 45.0%
!! TGAGATATAGCTTTTGGGGG+TGG - chr5_1:62435735-62435754 Msa0742510:intron 45.0%
! CAAAACAGTTGCTGTTGGGT+TGG - chr5_1:62435813-62435832 Msa0742510:intron 45.0%
! AAACAGTTGCTGTTGGGTTG+GGG - chr5_1:62435815-62435834 Msa0742510:intron 45.0%
CTGCATCTCATGTTTAAGCC+AGG - chr5_1:62435839-62435858 Msa0742510:intron 45.0%
ATCTCATGTTTAAGCCAGGG+AGG - chr5_1:62435843-62435862 Msa0742510:intron 45.0%
TCTCATGTTTAAGCCAGGGA+GGG - chr5_1:62435844-62435863 Msa0742510:intron 45.0%
GGAGGGTGATTCCCTAATTA+AGG - chr5_1:62435861-62435880 Msa0742510:intron 45.0%
TCCCTACTGCCAACTCATAA+TGG + chr5_1:62435890-62435909 None:intergenic 45.0%
! TTATGAGTTGGCAGTAGGGA+AGG - chr5_1:62435890-62435909 Msa0742510:intron 45.0%
! TATGAGTTGGCAGTAGGGAA+GGG - chr5_1:62435891-62435910 Msa0742510:intron 45.0%
!! TTGTGGGGTTGGGTTTGTTT+TGG - chr5_1:62436318-62436337 Msa0742510:five_prime_UTR 45.0%
! AAGGAAGTTCTTGCTGCTTG+TGG - chr5_1:62433327-62433346 Msa0742510:intron 45.0%
!! CTGCTTGTGGAAGTATTGAG+TGG - chr5_1:62433340-62433359 Msa0742510:intron 45.0%
!! TTGTGGAAGTATTGAGTGGC+AGG - chr5_1:62433344-62433363 Msa0742510:intron 45.0%
GTTTAATCTAGATCAGCCGG+AGG - chr5_1:62433540-62433559 Msa0742510:intron 45.0%
AAAGAAAAACAAGGCTGGGG+AGG + chr5_1:62433783-62433802 None:intergenic 45.0%
TTGATTGTATCCCTTCCCTG+TGG - chr5_1:62433801-62433820 Msa0742510:intron 45.0%
TAAGTGTGTGCTTGTGGAGT+TGG + chr5_1:62434046-62434065 None:intergenic 45.0%
GTAGACTAAGTGTGTGCTTG+TGG + chr5_1:62434052-62434071 None:intergenic 45.0%
CATGTGTGATAAAGAGAGGC+TGG + chr5_1:62434091-62434110 None:intergenic 45.0%
AAGTGGAGATTGAAAACCGG+AGG - chr5_1:62434265-62434284 Msa0742510:CDS 45.0%
GCGCACAATTAAGAGAACAG+TGG - chr5_1:62434517-62434536 Msa0742510:intron 45.0%
AGAACAGTGGAAGCTGGAAA+GGG - chr5_1:62434530-62434549 Msa0742510:intron 45.0%
CTAGTATAAGTGGGATGCAC+AGG - chr5_1:62434573-62434592 Msa0742510:intron 45.0%
GGATGCACAGGGAATTAATG+AGG - chr5_1:62434585-62434604 Msa0742510:intron 45.0%
GTCTAACCAATATGCCTCTG+GGG - chr5_1:62434637-62434656 Msa0742510:CDS 45.0%
! CATTATCCCCAGAGGCATAT+TGG + chr5_1:62434646-62434665 None:intergenic 45.0%
CAATTGTGGACGAACGGAAA+TGG + chr5_1:62435426-62435445 None:intergenic 45.0%
CTGGAACAATTGTGGACGAA+CGG + chr5_1:62435432-62435451 None:intergenic 45.0%
TGCCGTAACTGGAACAATTG+TGG + chr5_1:62435440-62435459 None:intergenic 45.0%
TTGCGCAACATCGTTTCTGT+CGG - chr5_1:62435490-62435509 Msa0742510:intron 45.0%
AGGAACGTTACTCACAGGAA+AGG + chr5_1:62435521-62435540 None:intergenic 45.0%
GGTCGATACAGTGAAGGTTA+CGG + chr5_1:62435572-62435591 None:intergenic 45.0%
!! TAAAGCGTCGCACACAATGA+AGG + chr5_1:62435601-62435620 None:intergenic 45.0%
TCAACGCAAACAGGGTAACA+TGG + chr5_1:62435674-62435693 None:intergenic 45.0%
TACTTGGCATTGTTATCCCG+TGG - chr5_1:62435702-62435721 Msa0742510:intron 45.0%
!! TGAGATATAGCTTTTGGGGG+TGG - chr5_1:62435735-62435754 Msa0742510:intron 45.0%
! CAAAACAGTTGCTGTTGGGT+TGG - chr5_1:62435813-62435832 Msa0742510:intron 45.0%
! AAACAGTTGCTGTTGGGTTG+GGG - chr5_1:62435815-62435834 Msa0742510:intron 45.0%
CTGCATCTCATGTTTAAGCC+AGG - chr5_1:62435839-62435858 Msa0742510:intron 45.0%
ATCTCATGTTTAAGCCAGGG+AGG - chr5_1:62435843-62435862 Msa0742510:intron 45.0%
TCTCATGTTTAAGCCAGGGA+GGG - chr5_1:62435844-62435863 Msa0742510:intron 45.0%
GGAGGGTGATTCCCTAATTA+AGG - chr5_1:62435861-62435880 Msa0742510:intron 45.0%
TCCCTACTGCCAACTCATAA+TGG + chr5_1:62435890-62435909 None:intergenic 45.0%
! TTATGAGTTGGCAGTAGGGA+AGG - chr5_1:62435890-62435909 Msa0742510:intron 45.0%
! TATGAGTTGGCAGTAGGGAA+GGG - chr5_1:62435891-62435910 Msa0742510:intron 45.0%
!! TTGTGGGGTTGGGTTTGTTT+TGG - chr5_1:62436318-62436337 Msa0742510:five_prime_UTR 45.0%
!!! TATTTTATCATTAAAAAAAA+GGG + chr5_1:62432450-62432469 None:intergenic 5.0%
!!! ATATTTTATCATTAAAAAAA+AGG + chr5_1:62432451-62432470 None:intergenic 5.0%
!!! TATTTTATCATTAAAAAAAA+GGG + chr5_1:62432450-62432469 None:intergenic 5.0%
!!! ATATTTTATCATTAAAAAAA+AGG + chr5_1:62432451-62432470 None:intergenic 5.0%
CATGGGAAGATCACTTCCTC+CGG + chr5_1:62433559-62433578 None:intergenic 50.0%
TTGTATCCCTTCCCTGTGGT+AGG - chr5_1:62433805-62433824 Msa0742510:intron 50.0%
ACCTTTCCTACCACAGGGAA+GGG + chr5_1:62433814-62433833 None:intergenic 50.0%
TGTGATAAAGAGAGGCTGGC+AGG + chr5_1:62434087-62434106 None:intergenic 50.0%
TGGAGATTGAAAACCGGAGG+AGG - chr5_1:62434268-62434287 Msa0742510:CDS 50.0%
AGATTGAAAACCGGAGGAGG+TGG - chr5_1:62434271-62434290 Msa0742510:CDS 50.0%
GAGAACAGTGGAAGCTGGAA+AGG - chr5_1:62434529-62434548 Msa0742510:intron 50.0%
GCGCAAAAACAATGTCGCAC+AGG + chr5_1:62435476-62435495 None:intergenic 50.0%
TCGCACACAATGAAGGCTAG+GGG + chr5_1:62435594-62435613 None:intergenic 50.0%
GTCGCACACAATGAAGGCTA+GGG + chr5_1:62435595-62435614 None:intergenic 50.0%
!! AACAGTTGCTGTTGGGTTGG+GGG - chr5_1:62435816-62435835 Msa0742510:intron 50.0%
AATTAGGGAATCACCCTCCC+TGG + chr5_1:62435860-62435879 None:intergenic 50.0%
CATGGGAAGATCACTTCCTC+CGG + chr5_1:62433559-62433578 None:intergenic 50.0%
TTGTATCCCTTCCCTGTGGT+AGG - chr5_1:62433805-62433824 Msa0742510:intron 50.0%
ACCTTTCCTACCACAGGGAA+GGG + chr5_1:62433814-62433833 None:intergenic 50.0%
TGTGATAAAGAGAGGCTGGC+AGG + chr5_1:62434087-62434106 None:intergenic 50.0%
TGGAGATTGAAAACCGGAGG+AGG - chr5_1:62434268-62434287 Msa0742510:CDS 50.0%
AGATTGAAAACCGGAGGAGG+TGG - chr5_1:62434271-62434290 Msa0742510:CDS 50.0%
GAGAACAGTGGAAGCTGGAA+AGG - chr5_1:62434529-62434548 Msa0742510:intron 50.0%
GCGCAAAAACAATGTCGCAC+AGG + chr5_1:62435476-62435495 None:intergenic 50.0%
TCGCACACAATGAAGGCTAG+GGG + chr5_1:62435594-62435613 None:intergenic 50.0%
GTCGCACACAATGAAGGCTA+GGG + chr5_1:62435595-62435614 None:intergenic 50.0%
!! AACAGTTGCTGTTGGGTTGG+GGG - chr5_1:62435816-62435835 Msa0742510:intron 50.0%
AATTAGGGAATCACCCTCCC+TGG + chr5_1:62435860-62435879 None:intergenic 50.0%
AAAAACAAGGCTGGGGAGGC+GGG + chr5_1:62433779-62433798 None:intergenic 55.0%
GAAAAACAAGGCTGGGGAGG+CGG + chr5_1:62433780-62433799 None:intergenic 55.0%
TCCCTTCCCTGTGGTAGGAA+AGG - chr5_1:62433810-62433829 Msa0742510:intron 55.0%
CACCTTTCCTACCACAGGGA+AGG + chr5_1:62433815-62433834 None:intergenic 55.0%
TGGACGAACGGAAATGGCAG+GGG + chr5_1:62435420-62435439 None:intergenic 55.0%
GTGGACGAACGGAAATGGCA+GGG + chr5_1:62435421-62435440 None:intergenic 55.0%
TGTGGACGAACGGAAATGGC+AGG + chr5_1:62435422-62435441 None:intergenic 55.0%
ACAATGTCGCACAGGAACGG+TGG + chr5_1:62435468-62435487 None:intergenic 55.0%
CCTGCAGGAACGTTACTCAC+AGG + chr5_1:62435526-62435545 None:intergenic 55.0%
CCTGTGAGTAACGTTCCTGC+AGG - chr5_1:62435523-62435542 Msa0742510:intron 55.0%
AGGTTACGGCATCACGAGCA+GGG + chr5_1:62435558-62435577 None:intergenic 55.0%
AAGGTTACGGCATCACGAGC+AGG + chr5_1:62435559-62435578 None:intergenic 55.0%
CTAGGGGGTCGATACAGTGA+AGG + chr5_1:62435578-62435597 None:intergenic 55.0%
CGCACACAATGAAGGCTAGG+GGG + chr5_1:62435593-62435612 None:intergenic 55.0%
CGTCGCACACAATGAAGGCT+AGG + chr5_1:62435596-62435615 None:intergenic 55.0%
GGTAACATGGAGCGCAGGAA+GGG + chr5_1:62435661-62435680 None:intergenic 55.0%
AACAGGGTAACATGGAGCGC+AGG + chr5_1:62435666-62435685 None:intergenic 55.0%
AAAAACAAGGCTGGGGAGGC+GGG + chr5_1:62433779-62433798 None:intergenic 55.0%
GAAAAACAAGGCTGGGGAGG+CGG + chr5_1:62433780-62433799 None:intergenic 55.0%
TCCCTTCCCTGTGGTAGGAA+AGG - chr5_1:62433810-62433829 Msa0742510:intron 55.0%
CACCTTTCCTACCACAGGGA+AGG + chr5_1:62433815-62433834 None:intergenic 55.0%
TGGACGAACGGAAATGGCAG+GGG + chr5_1:62435420-62435439 None:intergenic 55.0%
GTGGACGAACGGAAATGGCA+GGG + chr5_1:62435421-62435440 None:intergenic 55.0%
TGTGGACGAACGGAAATGGC+AGG + chr5_1:62435422-62435441 None:intergenic 55.0%
ACAATGTCGCACAGGAACGG+TGG + chr5_1:62435468-62435487 None:intergenic 55.0%
CCTGCAGGAACGTTACTCAC+AGG + chr5_1:62435526-62435545 None:intergenic 55.0%
CCTGTGAGTAACGTTCCTGC+AGG - chr5_1:62435523-62435542 Msa0742510:intron 55.0%
AGGTTACGGCATCACGAGCA+GGG + chr5_1:62435558-62435577 None:intergenic 55.0%
AAGGTTACGGCATCACGAGC+AGG + chr5_1:62435559-62435578 None:intergenic 55.0%
CTAGGGGGTCGATACAGTGA+AGG + chr5_1:62435578-62435597 None:intergenic 55.0%
CGCACACAATGAAGGCTAGG+GGG + chr5_1:62435593-62435612 None:intergenic 55.0%
CGTCGCACACAATGAAGGCT+AGG + chr5_1:62435596-62435615 None:intergenic 55.0%
GGTAACATGGAGCGCAGGAA+GGG + chr5_1:62435661-62435680 None:intergenic 55.0%
AACAGGGTAACATGGAGCGC+AGG + chr5_1:62435666-62435685 None:intergenic 55.0%
AAAACAAGGCTGGGGAGGCG+GGG + chr5_1:62433778-62433797 None:intergenic 60.0%
CATTGCTGGTCCACCTCCTC+CGG + chr5_1:62434284-62434303 None:intergenic 60.0%
! TACCTGGGTGCGAGCATTGC+TGG + chr5_1:62434298-62434317 None:intergenic 60.0%
ACGAACGGAAATGGCAGGGG+GGG + chr5_1:62435417-62435436 None:intergenic 60.0%
GACGAACGGAAATGGCAGGG+GGG + chr5_1:62435418-62435437 None:intergenic 60.0%
GGACGAACGGAAATGGCAGG+GGG + chr5_1:62435419-62435438 None:intergenic 60.0%
ATGTCGCACAGGAACGGTGG+CGG + chr5_1:62435465-62435484 None:intergenic 60.0%
TACGGCATCACGAGCAGGGA+AGG + chr5_1:62435554-62435573 None:intergenic 60.0%
AGCGCAGGAAGGGAATGGTG+TGG + chr5_1:62435651-62435670 None:intergenic 60.0%
CATGGAGCGCAGGAAGGGAA+TGG + chr5_1:62435656-62435675 None:intergenic 60.0%
GGGTAACATGGAGCGCAGGA+AGG + chr5_1:62435662-62435681 None:intergenic 60.0%
AAAACAAGGCTGGGGAGGCG+GGG + chr5_1:62433778-62433797 None:intergenic 60.0%
CATTGCTGGTCCACCTCCTC+CGG + chr5_1:62434284-62434303 None:intergenic 60.0%
! TACCTGGGTGCGAGCATTGC+TGG + chr5_1:62434298-62434317 None:intergenic 60.0%
ACGAACGGAAATGGCAGGGG+GGG + chr5_1:62435417-62435436 None:intergenic 60.0%
GACGAACGGAAATGGCAGGG+GGG + chr5_1:62435418-62435437 None:intergenic 60.0%
GGACGAACGGAAATGGCAGG+GGG + chr5_1:62435419-62435438 None:intergenic 60.0%
ATGTCGCACAGGAACGGTGG+CGG + chr5_1:62435465-62435484 None:intergenic 60.0%
TACGGCATCACGAGCAGGGA+AGG + chr5_1:62435554-62435573 None:intergenic 60.0%
AGCGCAGGAAGGGAATGGTG+TGG + chr5_1:62435651-62435670 None:intergenic 60.0%
CATGGAGCGCAGGAAGGGAA+TGG + chr5_1:62435656-62435675 None:intergenic 60.0%
GGGTAACATGGAGCGCAGGA+AGG + chr5_1:62435662-62435681 None:intergenic 60.0%
GACCAGCAATGCTCGCACCC+AGG - chr5_1:62434293-62434312 Msa0742510:CDS 65.0%
GACCAGCAATGCTCGCACCC+AGG - chr5_1:62434293-62434312 Msa0742510:CDS 65.0%
AAGGCTGGGGAGGCGGGGAA+AGG + chr5_1:62433773-62433792 None:intergenic 70.0%
GCAGGGAAGGCTGTGCCTGC+AGG + chr5_1:62435541-62435560 None:intergenic 70.0%
AAGGCTGGGGAGGCGGGGAA+AGG + chr5_1:62433773-62433792 None:intergenic 70.0%
GCAGGGAAGGCTGTGCCTGC+AGG + chr5_1:62435541-62435560 None:intergenic 70.0%
! CGGTGGCGGCGTGCCGTAAC+TGG + chr5_1:62435451-62435470 None:intergenic 75.0%
! CGGTGGCGGCGTGCCGTAAC+TGG + chr5_1:62435451-62435470 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 62432414 62436494 62432414 ID=Msa0742510;Name=Msa0742510
chr5_1 mRNA 62432414 62436494 62432414 ID=Msa0742510-mRNA-1;Parent=Msa0742510;Name=Msa0742510-mRNA-1;_AED=0.27;_eAED=0.27;_QI=227|0.75|0.8|0.8|1|1|5|0|168
chr5_1 exon 62432414 62432444 62432414 ID=Msa0742510-mRNA-1:exon:18345;Parent=Msa0742510-mRNA-1
chr5_1 exon 62434197 62434393 62434197 ID=Msa0742510-mRNA-1:exon:18344;Parent=Msa0742510-mRNA-1
chr5_1 exon 62434594 62434707 62434594 ID=Msa0742510-mRNA-1:exon:18343;Parent=Msa0742510-mRNA-1
chr5_1 exon 62435543 62435653 62435543 ID=Msa0742510-mRNA-1:exon:18342;Parent=Msa0742510-mRNA-1
chr5_1 exon 62436214 62436494 62436214 ID=Msa0742510-mRNA-1:exon:18341;Parent=Msa0742510-mRNA-1
chr5_1 five_prime_UTR 62436268 62436494 62436268 ID=Msa0742510-mRNA-1:five_prime_utr;Parent=Msa0742510-mRNA-1
chr5_1 CDS 62436214 62436267 62436214 ID=Msa0742510-mRNA-1:cds;Parent=Msa0742510-mRNA-1
chr5_1 CDS 62435543 62435653 62435543 ID=Msa0742510-mRNA-1:cds;Parent=Msa0742510-mRNA-1
chr5_1 CDS 62434594 62434707 62434594 ID=Msa0742510-mRNA-1:cds;Parent=Msa0742510-mRNA-1
chr5_1 CDS 62434197 62434393 62434197 ID=Msa0742510-mRNA-1:cds;Parent=Msa0742510-mRNA-1
chr5_1 CDS 62432414 62432444 62432414 ID=Msa0742510-mRNA-1:cds;Parent=Msa0742510-mRNA-1
Gene Sequence

>Msa0742510

ATGCCCTCAGCTCAAGATCCATTTTACGTTGTCAAAGAAGATATTCAAGATTCTATTGATAGGTTGCAATCTAATTTTCATCAATGGGAAAACACTTCTGATACTGGTGAGCATTTGAACCTTTCAAAGGAAGTTCTTGCTGCTTGTGGAAGTATTGAGTGGCAGGTGGATGAATTGGACAAAGCAATTTCTGTAGCATCTAGAGATCCTTCTTGGTATGGCATTGATGAAGTGGAGATTGAAAACCGGAGGAGGTGGACCAGCAATGCTCGCACCCAGGTGCGCACAATTAAGAGAACAGTGGAAGCTGGAAAGGGATCAAATACAACAACTCATGCTAGTATAAGTGGGATGCACAGGGAATTAATGAGGCTTCCAGATTCTCATCAAAGTACGTCTAAGTCTAACCAATATGCCTCTGGGGATAATGATGATTTCATAGAATCAGAATCAGATAGGCAAATGCTTCTTATAAAGTTAATTCATAGTGAAGTTAATAGAGTGTAA

Protein sequence

>Msa0742510

MPSAQDPFYVVKEDIQDSIDRLQSNFHQWENTSDTGEHLNLSKEVLAACGSIEWQVDELDKAISVASRDPSWYGIDEVEIENRRRWTSNARTQVRTIKRTVEAGKGSNTTTHASISGMHRELMRLPDSHQSTSKSNQYASGDNDDFIESESDRQMLLIKLIHSEVNRV*