Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0198310 | XP_013449662.3 | 96.657 | 329 | 11 | 0 | 3 | 331 | 149 | 477 | 0.0 | 628 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0198310 | sp|P93051|ERDL7_ARATH | 72.308 | 325 | 90 | 0 | 3 | 327 | 135 | 459 | 1.49e-172 | 490 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0198310 | A0A072UCW0 | 96.657 | 329 | 11 | 0 | 3 | 331 | 149 | 477 | 0.0 | 628 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0198310 | Msa0198440 | 0.823306 | 1.486982e-53 | -8.615850e-47 |
| Msa0198310 | Msa0240660 | 0.997019 | 1.231179e-235 | -8.615850e-47 |
| Msa0198310 | Msa0240780 | 0.805657 | 1.200813e-49 | -8.615850e-47 |
| Msa0198310 | Msa0278670 | 0.828071 | 1.101875e-54 | -8.615850e-47 |
| Msa0198310 | Msa0302990 | -0.802007 | 6.879849e-49 | -8.615850e-47 |
| Msa0198310 | Msa0318070 | 0.815153 | 1.069397e-51 | -8.615850e-47 |
| Msa0198310 | Msa0318230 | 0.867861 | 1.001462e-65 | -8.615850e-47 |
| Msa0198310 | Msa0318260 | 0.881672 | 1.975217e-70 | -8.615850e-47 |
| Msa0198310 | Msa0377280 | 0.827088 | 1.897964e-54 | -8.615850e-47 |
| Msa0198310 | Msa0404690 | 0.822686 | 2.073924e-53 | -8.615850e-47 |
| Msa0198310 | Msa0462590 | 0.808427 | 3.114217e-50 | -8.615850e-47 |
| Msa0198310 | Msa0643020 | -0.808022 | 3.797650e-50 | -8.615850e-47 |
| Msa0198310 | Msa0714600 | 0.810433 | 1.155255e-50 | -8.615850e-47 |
| Msa0198310 | Msa0723140 | 0.805361 | 1.385619e-49 | -8.615850e-47 |
| Msa0198310 | Msa0812970 | 0.813771 | 2.162464e-51 | -8.615850e-47 |
| Msa0198310 | Msa0828570 | 0.829416 | 5.212669e-55 | -8.615850e-47 |
| Msa0198310 | Msa1162980 | 0.803080 | 4.133808e-49 | -8.615850e-47 |
| Msa0198310 | Msa1237260 | 0.813855 | 2.071716e-51 | -8.615850e-47 |
| Msa0198310 | Msa1317710 | 0.825376 | 4.848726e-54 | -8.615850e-47 |
| Msa0198310 | Msa1335970 | -0.811303 | 7.491150e-51 | -8.615850e-47 |
| Msa0198310 | Msa1460310 | -0.801048 | 1.082270e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0198310 | MtrunA17_Chr7g0259221 | 96.657 | 329 | 11 | 0 | 3 | 331 | 149 | 477 | 0.0 | 628 |
| Msa0198310 | MtrunA17_Chr7g0259471 | 90.881 | 329 | 30 | 0 | 3 | 331 | 147 | 475 | 0.0 | 597 |
| Msa0198310 | MtrunA17_Chr4g0066581 | 59.202 | 326 | 132 | 1 | 5 | 329 | 161 | 486 | 3.44e-137 | 398 |
| Msa0198310 | MtrunA17_Chr2g0286721 | 58.589 | 326 | 134 | 1 | 5 | 329 | 158 | 483 | 1.50e-132 | 386 |
| Msa0198310 | MtrunA17_Chr7g0273281 | 51.385 | 325 | 158 | 0 | 5 | 329 | 171 | 495 | 2.49e-121 | 358 |
| Msa0198310 | MtrunA17_Chr1g0155221 | 45.732 | 328 | 172 | 2 | 5 | 326 | 158 | 485 | 1.69e-100 | 304 |
| Msa0198310 | MtrunA17_Chr8g0373181 | 44.954 | 327 | 175 | 3 | 5 | 326 | 156 | 482 | 1.83e-98 | 299 |
| Msa0198310 | MtrunA17_Chr8g0373191 | 44.578 | 332 | 177 | 3 | 5 | 330 | 128 | 458 | 9.76e-95 | 288 |
| Msa0198310 | MtrunA17_Chr7g0273261 | 49.778 | 225 | 111 | 1 | 105 | 329 | 15 | 237 | 3.65e-80 | 244 |
| Msa0198310 | MtrunA17_Chr6g0457781 | 32.530 | 332 | 208 | 6 | 7 | 329 | 218 | 542 | 2.50e-51 | 178 |
| Msa0198310 | MtrunA17_Chr1g0213631 | 33.134 | 335 | 203 | 7 | 8 | 326 | 100 | 429 | 2.99e-51 | 176 |
| Msa0198310 | MtrunA17_Chr7g0250881 | 31.928 | 332 | 210 | 6 | 7 | 329 | 178 | 502 | 1.33e-48 | 170 |
| Msa0198310 | MtrunA17_Chr4g0032021 | 31.818 | 352 | 208 | 9 | 4 | 330 | 211 | 555 | 4.18e-48 | 169 |
| Msa0198310 | MtrunA17_Chr4g0021771 | 32.448 | 339 | 203 | 9 | 8 | 326 | 167 | 499 | 6.02e-48 | 169 |
| Msa0198310 | MtrunA17_Chr1g0213611 | 32.544 | 338 | 204 | 7 | 8 | 326 | 193 | 525 | 1.32e-47 | 168 |
| Msa0198310 | MtrunA17_Chr4g0039651 | 32.081 | 346 | 206 | 10 | 4 | 327 | 160 | 498 | 7.01e-47 | 165 |
| Msa0198310 | MtrunA17_Chr7g0214451 | 33.134 | 335 | 202 | 8 | 8 | 326 | 148 | 476 | 1.51e-46 | 164 |
| Msa0198310 | MtrunA17_Chr7g0221631 | 90.123 | 81 | 6 | 1 | 216 | 296 | 39 | 117 | 2.70e-45 | 150 |
| Msa0198310 | MtrunA17_Chr4g0034681 | 30.312 | 353 | 210 | 8 | 8 | 328 | 142 | 490 | 9.64e-42 | 152 |
| Msa0198310 | MtrunA17_Chr2g0282031 | 31.548 | 336 | 210 | 5 | 8 | 326 | 165 | 497 | 3.32e-41 | 150 |
| Msa0198310 | MtrunA17_Chr3g0144361 | 31.161 | 353 | 205 | 8 | 8 | 326 | 140 | 488 | 3.91e-41 | 150 |
| Msa0198310 | MtrunA17_Chr3g0115711 | 31.212 | 330 | 214 | 5 | 8 | 325 | 154 | 482 | 4.26e-39 | 144 |
| Msa0198310 | MtrunA17_Chr3g0115741 | 30.952 | 336 | 208 | 9 | 8 | 325 | 157 | 486 | 9.13e-38 | 140 |
| Msa0198310 | MtrunA17_Chr4g0065324 | 29.518 | 332 | 217 | 7 | 7 | 325 | 159 | 486 | 6.88e-36 | 135 |
| Msa0198310 | MtrunA17_Chr3g0115781 | 29.341 | 334 | 218 | 7 | 8 | 326 | 156 | 486 | 7.57e-36 | 135 |
| Msa0198310 | MtrunA17_Chr3g0115751 | 29.641 | 334 | 215 | 8 | 8 | 325 | 159 | 488 | 8.75e-36 | 135 |
| Msa0198310 | MtrunA17_Chr4g0036021 | 30.791 | 354 | 206 | 11 | 8 | 328 | 139 | 486 | 1.19e-35 | 135 |
| Msa0198310 | MtrunA17_Chr3g0121674 | 31.399 | 293 | 172 | 9 | 50 | 325 | 2 | 282 | 4.12e-35 | 129 |
| Msa0198310 | MtrunA17_Chr3g0115721 | 29.217 | 332 | 219 | 6 | 8 | 325 | 154 | 483 | 4.26e-35 | 133 |
| Msa0198310 | MtrunA17_Chr4g0004821 | 30.699 | 329 | 217 | 6 | 9 | 331 | 151 | 474 | 2.58e-33 | 128 |
| Msa0198310 | MtrunA17_Chr4g0065311 | 29.042 | 334 | 216 | 8 | 7 | 325 | 151 | 478 | 5.43e-33 | 127 |
| Msa0198310 | MtrunA17_Chr3g0128171 | 30.029 | 343 | 215 | 7 | 2 | 325 | 102 | 438 | 1.21e-32 | 126 |
| Msa0198310 | MtrunA17_Chr8g0390141 | 29.518 | 332 | 218 | 9 | 7 | 325 | 157 | 485 | 1.35e-32 | 126 |
| Msa0198310 | MtrunA17_Chr5g0404191 | 41.935 | 124 | 72 | 0 | 5 | 128 | 159 | 282 | 3.86e-32 | 121 |
| Msa0198310 | MtrunA17_Chr3g0078791 | 27.381 | 336 | 213 | 6 | 2 | 325 | 94 | 410 | 4.62e-32 | 124 |
| Msa0198310 | MtrunA17_Chr1g0205691 | 27.083 | 336 | 230 | 5 | 7 | 329 | 154 | 487 | 6.75e-32 | 124 |
| Msa0198310 | MtrunA17_Chr5g0394341 | 26.409 | 337 | 231 | 7 | 7 | 329 | 154 | 487 | 9.29e-32 | 124 |
| Msa0198310 | MtrunA17_Chr6g0486021 | 28.107 | 338 | 212 | 7 | 9 | 330 | 165 | 487 | 1.28e-31 | 123 |
| Msa0198310 | MtrunA17_Chr4g0065351 | 29.231 | 325 | 213 | 6 | 14 | 325 | 1 | 321 | 2.00e-31 | 121 |
| Msa0198310 | MtrunA17_Chr6g0485661 | 28.909 | 339 | 210 | 6 | 8 | 321 | 170 | 502 | 2.37e-31 | 123 |
| Msa0198310 | MtrunA17_Chr5g0420841 | 28.947 | 342 | 222 | 9 | 2 | 326 | 148 | 485 | 4.02e-31 | 122 |
| Msa0198310 | MtrunA17_Chr5g0404181 | 51.020 | 98 | 48 | 0 | 229 | 326 | 31 | 128 | 7.21e-31 | 113 |
| Msa0198310 | MtrunA17_Chr5g0432581 | 30.199 | 351 | 211 | 11 | 8 | 326 | 131 | 479 | 8.65e-31 | 121 |
| Msa0198310 | MtrunA17_Chr1g0205671 | 26.488 | 336 | 232 | 5 | 7 | 329 | 154 | 487 | 1.34e-30 | 120 |
| Msa0198310 | MtrunA17_Chr3g0085971 | 27.859 | 341 | 227 | 8 | 2 | 326 | 148 | 485 | 3.39e-30 | 120 |
| Msa0198310 | MtrunA17_Chr3g0128081 | 28.824 | 340 | 223 | 7 | 2 | 325 | 149 | 485 | 4.92e-30 | 119 |
| Msa0198310 | MtrunA17_Chr3g0115731 | 29.268 | 287 | 194 | 4 | 47 | 325 | 177 | 462 | 5.35e-30 | 119 |
| Msa0198310 | MtrunA17_Chr5g0417611 | 28.863 | 343 | 219 | 8 | 2 | 325 | 150 | 486 | 7.47e-30 | 119 |
| Msa0198310 | MtrunA17_Chr1g0205681 | 26.190 | 336 | 233 | 5 | 7 | 329 | 155 | 488 | 8.30e-30 | 119 |
| Msa0198310 | MtrunA17_Chr8g0390521 | 28.696 | 345 | 214 | 9 | 8 | 326 | 130 | 468 | 1.01e-29 | 118 |
| Msa0198310 | MtrunA17_Chr7g0257631 | 28.485 | 330 | 223 | 6 | 7 | 325 | 191 | 518 | 2.39e-29 | 117 |
| Msa0198310 | MtrunA17_Chr8g0373531 | 30.769 | 351 | 209 | 10 | 8 | 326 | 131 | 479 | 2.42e-29 | 117 |
| Msa0198310 | MtrunA17_Chr3g0078971 | 26.488 | 336 | 226 | 8 | 7 | 326 | 154 | 484 | 2.07e-28 | 115 |
| Msa0198310 | MtrunA17_Chr5g0445601 | 27.273 | 330 | 227 | 6 | 7 | 325 | 157 | 484 | 2.46e-28 | 114 |
| Msa0198310 | MtrunA17_Chr4g0048411 | 27.515 | 338 | 222 | 7 | 7 | 326 | 154 | 486 | 3.92e-28 | 114 |
| Msa0198310 | MtrunA17_Chr8g0376601 | 32.127 | 221 | 137 | 4 | 8 | 215 | 141 | 361 | 4.14e-28 | 114 |
| Msa0198310 | MtrunA17_Chr8g0376601 | 39.130 | 92 | 55 | 1 | 229 | 319 | 450 | 541 | 5.61e-13 | 69.7 |
| Msa0198310 | MtrunA17_Chr3g0078991 | 26.866 | 335 | 227 | 8 | 7 | 326 | 154 | 485 | 9.47e-28 | 113 |
| Msa0198310 | MtrunA17_Chr8g0390261 | 25.904 | 332 | 230 | 7 | 7 | 325 | 157 | 485 | 9.50e-28 | 113 |
| Msa0198310 | MtrunA17_Chr7g0259451 | 92.000 | 50 | 4 | 0 | 245 | 294 | 1 | 50 | 1.14e-27 | 102 |
| Msa0198310 | MtrunA17_Chr6g0486681 | 25.904 | 332 | 230 | 8 | 7 | 325 | 157 | 485 | 1.70e-27 | 112 |
| Msa0198310 | MtrunA17_Chr6g0486671 | 25.904 | 332 | 230 | 8 | 7 | 325 | 157 | 485 | 1.70e-27 | 112 |
| Msa0198310 | MtrunA17_Chr1g0173341 | 94.545 | 55 | 3 | 0 | 163 | 217 | 67 | 121 | 5.29e-27 | 103 |
| Msa0198310 | MtrunA17_Chr4g0048051 | 28.235 | 340 | 217 | 7 | 7 | 326 | 154 | 486 | 5.74e-27 | 110 |
| Msa0198310 | MtrunA17_Chr1g0164851 | 28.012 | 332 | 225 | 5 | 7 | 326 | 155 | 484 | 7.31e-27 | 110 |
| Msa0198310 | MtrunA17_Chr1g0164871 | 27.711 | 332 | 226 | 5 | 7 | 326 | 155 | 484 | 1.48e-26 | 109 |
| Msa0198310 | MtrunA17_Chr3g0119401 | 28.035 | 346 | 207 | 10 | 7 | 329 | 206 | 532 | 1.83e-26 | 109 |
| Msa0198310 | MtrunA17_Chr2g0303731 | 30.804 | 224 | 136 | 6 | 8 | 215 | 141 | 361 | 6.96e-26 | 108 |
| Msa0198310 | MtrunA17_Chr2g0303731 | 40.000 | 100 | 57 | 2 | 229 | 326 | 452 | 550 | 5.33e-14 | 72.8 |
| Msa0198310 | MtrunA17_Chr5g0403831 | 26.316 | 361 | 215 | 9 | 7 | 326 | 142 | 492 | 2.21e-25 | 106 |
| Msa0198310 | MtrunA17_Chr8g0376611 | 31.220 | 205 | 128 | 4 | 8 | 199 | 74 | 278 | 3.42e-25 | 105 |
| Msa0198310 | MtrunA17_Chr8g0376611 | 36.893 | 103 | 56 | 2 | 229 | 326 | 382 | 480 | 7.66e-13 | 68.9 |
| Msa0198310 | MtrunA17_Chr2g0303701 | 29.864 | 221 | 137 | 5 | 8 | 214 | 141 | 357 | 1.18e-24 | 104 |
| Msa0198310 | MtrunA17_Chr5g0437021 | 27.246 | 334 | 225 | 7 | 7 | 326 | 155 | 484 | 3.34e-24 | 102 |
| Msa0198310 | MtrunA17_Chr8g0376631 | 30.049 | 203 | 129 | 4 | 8 | 197 | 141 | 343 | 3.53e-24 | 103 |
| Msa0198310 | MtrunA17_Chr8g0376631 | 37.864 | 103 | 55 | 2 | 229 | 326 | 451 | 549 | 5.92e-14 | 72.8 |
| Msa0198310 | MtrunA17_Chr7g0273271 | 57.746 | 71 | 30 | 0 | 5 | 75 | 136 | 206 | 3.28e-21 | 90.1 |
| Msa0198310 | MtrunA17_Chr5g0419321 | 29.921 | 254 | 152 | 6 | 93 | 323 | 479 | 729 | 2.14e-20 | 92.0 |
| Msa0198310 | MtrunA17_Chr5g0419321 | 36.634 | 101 | 56 | 3 | 8 | 101 | 146 | 245 | 6.09e-12 | 66.6 |
| Msa0198310 | MtrunA17_Chr3g0146061 | 30.000 | 230 | 143 | 4 | 109 | 323 | 495 | 721 | 5.93e-19 | 87.8 |
| Msa0198310 | MtrunA17_Chr3g0146061 | 40.426 | 94 | 49 | 3 | 7 | 93 | 117 | 210 | 3.79e-11 | 64.3 |
| Msa0198310 | MtrunA17_Chr3g0144261 | 31.163 | 215 | 131 | 3 | 123 | 323 | 500 | 711 | 7.28e-19 | 87.4 |
| Msa0198310 | MtrunA17_Chr3g0144261 | 40.196 | 102 | 53 | 3 | 7 | 101 | 115 | 215 | 1.77e-13 | 71.2 |
| Msa0198310 | MtrunA17_Chr2g0290181 | 29.310 | 232 | 142 | 7 | 8 | 220 | 142 | 370 | 1.15e-18 | 86.7 |
| Msa0198310 | MtrunA17_Chr2g0290181 | 35.354 | 99 | 63 | 1 | 229 | 326 | 455 | 553 | 6.78e-13 | 69.3 |
| Msa0198310 | MtrunA17_Chr5g0407441 | 30.172 | 232 | 144 | 5 | 107 | 323 | 475 | 703 | 2.80e-18 | 85.9 |
| Msa0198310 | MtrunA17_Chr5g0407441 | 37.624 | 101 | 55 | 3 | 8 | 101 | 118 | 217 | 1.62e-12 | 68.6 |
| Msa0198310 | MtrunA17_Chr5g0434261 | 25.083 | 303 | 182 | 8 | 56 | 319 | 7 | 303 | 1.05e-17 | 82.4 |
| Msa0198310 | MtrunA17_Chr8g0370151 | 27.615 | 239 | 149 | 5 | 106 | 323 | 107 | 342 | 7.27e-17 | 80.5 |
| Msa0198310 | MtrunA17_Chr2g0290161 | 27.200 | 250 | 133 | 8 | 8 | 240 | 75 | 292 | 1.00e-14 | 74.7 |
| Msa0198310 | MtrunA17_Chr5g0434251 | 34.906 | 106 | 60 | 2 | 229 | 329 | 38 | 139 | 2.31e-12 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0198310 | AT2G48020.2 | 72.308 | 325 | 90 | 0 | 3 | 327 | 135 | 459 | 1.51e-173 | 490 |
| Msa0198310 | AT2G48020.1 | 72.308 | 325 | 90 | 0 | 3 | 327 | 135 | 459 | 1.51e-173 | 490 |
| Msa0198310 | AT5G18840.1 | 57.927 | 328 | 137 | 1 | 3 | 329 | 151 | 478 | 1.49e-130 | 381 |
| Msa0198310 | AT3G05150.2 | 55.046 | 327 | 146 | 1 | 5 | 330 | 144 | 470 | 4.82e-127 | 372 |
| Msa0198310 | AT3G05150.1 | 54.740 | 327 | 147 | 1 | 5 | 330 | 144 | 470 | 6.21e-127 | 372 |
| Msa0198310 | AT3G05150.3 | 54.740 | 327 | 147 | 1 | 5 | 330 | 144 | 470 | 6.21e-127 | 372 |
| Msa0198310 | AT1G54730.2 | 50.765 | 327 | 161 | 0 | 3 | 329 | 139 | 465 | 1.97e-121 | 357 |
| Msa0198310 | AT2G48020.4 | 69.231 | 234 | 72 | 0 | 3 | 236 | 135 | 368 | 2.87e-112 | 331 |
| Msa0198310 | AT1G54730.3 | 52.055 | 292 | 140 | 0 | 3 | 294 | 139 | 430 | 6.02e-109 | 324 |
| Msa0198310 | AT1G54730.5 | 47.706 | 327 | 150 | 1 | 3 | 329 | 139 | 444 | 2.57e-108 | 323 |
| Msa0198310 | AT3G05165.3 | 47.077 | 325 | 172 | 0 | 5 | 329 | 139 | 463 | 7.35e-107 | 320 |
| Msa0198310 | AT3G05165.2 | 47.077 | 325 | 172 | 0 | 5 | 329 | 139 | 463 | 7.35e-107 | 320 |
| Msa0198310 | AT3G05165.1 | 47.077 | 325 | 172 | 0 | 5 | 329 | 139 | 463 | 7.35e-107 | 320 |
| Msa0198310 | AT3G05160.3 | 46.462 | 325 | 174 | 0 | 5 | 329 | 81 | 405 | 3.12e-106 | 317 |
| Msa0198310 | AT3G05160.2 | 46.462 | 325 | 174 | 0 | 5 | 329 | 81 | 405 | 3.12e-106 | 317 |
| Msa0198310 | AT3G05160.1 | 46.462 | 325 | 174 | 0 | 5 | 329 | 130 | 454 | 1.27e-105 | 317 |
| Msa0198310 | AT3G05155.1 | 45.820 | 323 | 171 | 2 | 5 | 326 | 136 | 455 | 1.47e-100 | 304 |
| Msa0198310 | AT1G19450.1 | 46.547 | 333 | 163 | 3 | 5 | 327 | 158 | 485 | 1.97e-100 | 304 |
| Msa0198310 | AT1G08920.1 | 44.308 | 325 | 181 | 0 | 5 | 329 | 141 | 465 | 2.10e-99 | 301 |
| Msa0198310 | AT1G08930.1 | 44.000 | 325 | 182 | 0 | 3 | 327 | 165 | 489 | 2.33e-99 | 302 |
| Msa0198310 | AT1G08930.2 | 44.000 | 325 | 182 | 0 | 3 | 327 | 165 | 489 | 2.33e-99 | 302 |
| Msa0198310 | AT4G04760.3 | 45.872 | 327 | 174 | 1 | 4 | 327 | 80 | 406 | 9.76e-99 | 298 |
| Msa0198310 | AT1G75220.1 | 46.341 | 328 | 171 | 2 | 5 | 327 | 157 | 484 | 1.17e-98 | 300 |
| Msa0198310 | AT4G04760.1 | 45.872 | 327 | 174 | 1 | 4 | 327 | 139 | 465 | 5.65e-98 | 298 |
| Msa0198310 | AT4G04750.1 | 44.785 | 326 | 178 | 1 | 5 | 328 | 145 | 470 | 7.62e-98 | 298 |
| Msa0198310 | AT4G04750.2 | 44.785 | 326 | 178 | 1 | 5 | 328 | 145 | 470 | 7.62e-98 | 298 |
| Msa0198310 | AT4G04750.3 | 44.785 | 326 | 178 | 1 | 5 | 328 | 189 | 514 | 1.55e-97 | 298 |
| Msa0198310 | AT3G05400.2 | 46.037 | 328 | 173 | 3 | 5 | 330 | 115 | 440 | 6.10e-97 | 294 |
| Msa0198310 | AT3G05400.1 | 46.037 | 328 | 173 | 3 | 5 | 330 | 135 | 460 | 9.42e-97 | 294 |
| Msa0198310 | AT1G08920.2 | 43.373 | 332 | 181 | 1 | 5 | 329 | 141 | 472 | 9.53e-97 | 295 |
| Msa0198310 | AT5G27360.2 | 43.865 | 326 | 183 | 0 | 5 | 330 | 40 | 365 | 5.13e-96 | 289 |
| Msa0198310 | AT5G27360.5 | 43.865 | 326 | 183 | 0 | 5 | 330 | 40 | 365 | 5.13e-96 | 289 |
| Msa0198310 | AT1G54730.4 | 48.630 | 292 | 129 | 1 | 3 | 294 | 139 | 409 | 1.09e-95 | 290 |
| Msa0198310 | AT5G27350.1 | 44.172 | 326 | 182 | 0 | 5 | 330 | 140 | 465 | 6.45e-95 | 290 |
| Msa0198310 | AT5G27360.1 | 43.865 | 326 | 183 | 0 | 5 | 330 | 144 | 469 | 7.23e-95 | 290 |
| Msa0198310 | AT3G20460.1 | 43.385 | 325 | 184 | 0 | 5 | 329 | 162 | 486 | 8.99e-95 | 290 |
| Msa0198310 | AT5G27360.3 | 43.865 | 326 | 183 | 0 | 5 | 330 | 192 | 517 | 2.05e-94 | 290 |
| Msa0198310 | AT2G48020.3 | 69.543 | 197 | 60 | 0 | 3 | 199 | 135 | 331 | 7.43e-94 | 283 |
| Msa0198310 | AT3G05165.6 | 46.102 | 295 | 159 | 0 | 5 | 299 | 139 | 433 | 2.86e-92 | 284 |
| Msa0198310 | AT1G54730.9 | 50.000 | 258 | 129 | 0 | 3 | 260 | 139 | 396 | 2.12e-88 | 271 |
| Msa0198310 | AT1G54730.7 | 50.000 | 258 | 129 | 0 | 3 | 260 | 139 | 396 | 2.12e-88 | 271 |
| Msa0198310 | AT1G08920.3 | 44.138 | 290 | 162 | 0 | 5 | 294 | 141 | 430 | 1.63e-86 | 268 |
| Msa0198310 | AT1G08900.5 | 40.184 | 326 | 195 | 0 | 5 | 330 | 92 | 417 | 1.45e-84 | 261 |
| Msa0198310 | AT1G08890.1 | 39.692 | 325 | 196 | 0 | 5 | 329 | 136 | 460 | 1.80e-84 | 263 |
| Msa0198310 | AT1G08900.3 | 40.184 | 326 | 195 | 0 | 5 | 330 | 126 | 451 | 2.40e-84 | 262 |
| Msa0198310 | AT1G08900.1 | 40.184 | 326 | 195 | 0 | 5 | 330 | 134 | 459 | 3.09e-84 | 262 |
| Msa0198310 | AT1G08900.2 | 40.184 | 326 | 195 | 0 | 5 | 330 | 134 | 459 | 3.09e-84 | 262 |
| Msa0198310 | AT4G04760.2 | 43.333 | 330 | 175 | 4 | 4 | 327 | 139 | 462 | 7.70e-84 | 261 |
| Msa0198310 | AT3G05165.4 | 45.196 | 281 | 154 | 0 | 5 | 285 | 139 | 419 | 2.09e-83 | 260 |
| Msa0198310 | AT3G05165.5 | 45.196 | 281 | 154 | 0 | 5 | 285 | 139 | 419 | 2.09e-83 | 260 |
| Msa0198310 | AT1G54730.8 | 46.124 | 258 | 118 | 1 | 3 | 260 | 139 | 375 | 3.37e-75 | 236 |
| Msa0198310 | AT1G08900.4 | 40.690 | 290 | 172 | 0 | 5 | 294 | 134 | 423 | 2.66e-71 | 228 |
| Msa0198310 | AT1G54730.11 | 52.041 | 196 | 94 | 0 | 3 | 198 | 139 | 334 | 1.19e-67 | 216 |
| Msa0198310 | AT5G27360.4 | 39.837 | 246 | 148 | 0 | 5 | 250 | 144 | 389 | 2.57e-59 | 197 |
| Msa0198310 | AT1G54730.10 | 51.429 | 175 | 85 | 0 | 3 | 177 | 139 | 313 | 8.13e-59 | 192 |
| Msa0198310 | AT1G54730.6 | 51.429 | 175 | 85 | 0 | 3 | 177 | 139 | 313 | 8.13e-59 | 192 |
| Msa0198310 | AT3G05155.2 | 45.876 | 194 | 102 | 1 | 5 | 198 | 136 | 326 | 8.06e-55 | 182 |
| Msa0198310 | AT2G43330.1 | 32.738 | 336 | 204 | 9 | 8 | 326 | 146 | 476 | 8.19e-49 | 171 |
| Msa0198310 | AT5G16150.2 | 31.437 | 334 | 213 | 6 | 7 | 331 | 218 | 544 | 1.17e-48 | 171 |
| Msa0198310 | AT5G16150.1 | 31.437 | 334 | 213 | 6 | 7 | 331 | 218 | 544 | 1.17e-48 | 171 |
| Msa0198310 | AT5G16150.3 | 31.437 | 334 | 213 | 6 | 7 | 331 | 218 | 544 | 1.17e-48 | 171 |
| Msa0198310 | AT5G17010.1 | 33.141 | 347 | 201 | 10 | 4 | 327 | 162 | 500 | 3.03e-48 | 169 |
| Msa0198310 | AT5G17010.3 | 33.141 | 347 | 201 | 10 | 4 | 327 | 162 | 500 | 3.03e-48 | 169 |
| Msa0198310 | AT5G17010.4 | 33.141 | 347 | 201 | 10 | 4 | 327 | 162 | 500 | 3.03e-48 | 169 |
| Msa0198310 | AT3G03090.1 | 32.754 | 345 | 205 | 9 | 4 | 327 | 162 | 500 | 4.41e-47 | 166 |
| Msa0198310 | AT5G59250.1 | 32.102 | 352 | 207 | 10 | 4 | 330 | 213 | 557 | 7.01e-47 | 166 |
| Msa0198310 | AT2G20780.2 | 30.838 | 334 | 213 | 8 | 8 | 326 | 109 | 439 | 1.24e-40 | 148 |
| Msa0198310 | AT2G20780.1 | 30.838 | 334 | 213 | 8 | 8 | 326 | 167 | 497 | 4.25e-40 | 147 |
| Msa0198310 | AT2G16120.1 | 29.014 | 355 | 210 | 11 | 8 | 326 | 138 | 486 | 1.40e-36 | 138 |
| Msa0198310 | AT2G16130.1 | 28.652 | 356 | 212 | 11 | 8 | 327 | 138 | 487 | 1.09e-35 | 135 |
| Msa0198310 | AT1G67300.2 | 29.799 | 349 | 197 | 9 | 9 | 331 | 166 | 492 | 2.01e-35 | 134 |
| Msa0198310 | AT1G67300.1 | 29.885 | 348 | 197 | 9 | 9 | 331 | 166 | 491 | 2.28e-35 | 134 |
| Msa0198310 | AT1G67300.3 | 29.885 | 348 | 197 | 9 | 9 | 331 | 166 | 491 | 2.28e-35 | 134 |
| Msa0198310 | AT1G05030.2 | 30.240 | 334 | 214 | 8 | 7 | 329 | 140 | 465 | 3.30e-35 | 134 |
| Msa0198310 | AT1G05030.1 | 30.240 | 334 | 214 | 8 | 7 | 329 | 192 | 517 | 8.17e-35 | 133 |
| Msa0198310 | AT5G26340.1 | 27.893 | 337 | 226 | 7 | 7 | 329 | 155 | 488 | 9.98e-34 | 130 |
| Msa0198310 | AT1G50310.2 | 26.786 | 336 | 232 | 5 | 3 | 325 | 9 | 343 | 1.09e-33 | 127 |
| Msa0198310 | AT3G18830.1 | 27.714 | 350 | 220 | 9 | 8 | 326 | 148 | 495 | 2.51e-33 | 129 |
| Msa0198310 | AT1G50310.1 | 27.190 | 331 | 227 | 5 | 8 | 325 | 157 | 486 | 9.32e-33 | 127 |
| Msa0198310 | AT4G36670.1 | 29.972 | 357 | 205 | 10 | 8 | 327 | 129 | 477 | 1.38e-32 | 127 |
| Msa0198310 | AT1G67300.6 | 31.884 | 276 | 170 | 6 | 9 | 274 | 166 | 433 | 7.54e-32 | 124 |
| Msa0198310 | AT1G67300.7 | 31.884 | 276 | 170 | 6 | 9 | 274 | 166 | 433 | 7.54e-32 | 124 |
| Msa0198310 | AT3G19940.1 | 26.284 | 331 | 229 | 6 | 8 | 325 | 157 | 485 | 1.88e-31 | 124 |
| Msa0198310 | AT4G02050.2 | 27.576 | 330 | 226 | 6 | 7 | 325 | 157 | 484 | 6.24e-31 | 122 |
| Msa0198310 | AT4G02050.1 | 27.576 | 330 | 226 | 6 | 7 | 325 | 157 | 484 | 6.24e-31 | 122 |
| Msa0198310 | AT1G79820.2 | 28.190 | 337 | 215 | 6 | 9 | 331 | 169 | 492 | 6.30e-31 | 122 |
| Msa0198310 | AT1G79820.1 | 28.190 | 337 | 215 | 6 | 9 | 331 | 169 | 492 | 6.30e-31 | 122 |
| Msa0198310 | AT1G11260.1 | 28.198 | 344 | 210 | 8 | 7 | 325 | 154 | 485 | 1.60e-30 | 121 |
| Msa0198310 | AT1G67300.4 | 32.210 | 267 | 163 | 6 | 9 | 265 | 166 | 424 | 1.71e-30 | 120 |
| Msa0198310 | AT1G67300.5 | 32.210 | 267 | 163 | 6 | 9 | 265 | 166 | 424 | 1.71e-30 | 120 |
| Msa0198310 | AT3G19930.1 | 27.545 | 334 | 226 | 5 | 7 | 326 | 153 | 484 | 9.08e-30 | 119 |
| Msa0198310 | AT3G19930.2 | 27.545 | 334 | 226 | 5 | 7 | 326 | 153 | 484 | 9.08e-30 | 119 |
| Msa0198310 | AT4G21480.1 | 29.706 | 340 | 210 | 9 | 7 | 326 | 154 | 484 | 2.32e-29 | 117 |
| Msa0198310 | AT1G34580.2 | 30.030 | 333 | 218 | 8 | 8 | 325 | 105 | 437 | 1.05e-28 | 115 |
| Msa0198310 | AT2G18480.1 | 27.841 | 352 | 216 | 9 | 8 | 326 | 134 | 480 | 1.34e-28 | 115 |
| Msa0198310 | AT1G34580.1 | 30.030 | 333 | 218 | 8 | 8 | 325 | 155 | 487 | 1.79e-28 | 115 |
| Msa0198310 | AT5G26250.1 | 27.586 | 348 | 211 | 9 | 7 | 329 | 152 | 483 | 2.15e-28 | 115 |
| Msa0198310 | AT5G23270.1 | 26.946 | 334 | 226 | 7 | 7 | 325 | 156 | 486 | 2.19e-28 | 115 |
| Msa0198310 | AT3G05960.1 | 29.598 | 348 | 204 | 10 | 7 | 329 | 151 | 482 | 4.69e-28 | 114 |
| Msa0198310 | AT1G07340.1 | 30.178 | 338 | 208 | 10 | 7 | 325 | 153 | 481 | 6.07e-28 | 114 |
| Msa0198310 | AT1G79820.4 | 29.242 | 277 | 174 | 4 | 9 | 274 | 169 | 434 | 3.23e-27 | 111 |
| Msa0198310 | AT1G30220.1 | 30.165 | 242 | 153 | 7 | 8 | 234 | 143 | 383 | 6.20e-26 | 108 |
| Msa0198310 | AT1G30220.1 | 37.864 | 103 | 55 | 2 | 229 | 326 | 455 | 553 | 2.37e-14 | 74.3 |
| Msa0198310 | AT5G17010.2 | 27.536 | 345 | 159 | 11 | 4 | 327 | 163 | 437 | 1.17e-25 | 107 |
| Msa0198310 | AT1G77210.3 | 25.982 | 331 | 229 | 7 | 7 | 324 | 8 | 335 | 7.30e-24 | 100 |
| Msa0198310 | AT1G77210.2 | 26.126 | 333 | 228 | 7 | 7 | 325 | 157 | 485 | 3.92e-23 | 100 |
| Msa0198310 | AT1G77210.1 | 26.126 | 333 | 228 | 7 | 7 | 325 | 157 | 485 | 3.92e-23 | 100 |
| Msa0198310 | AT5G61520.2 | 27.616 | 344 | 208 | 13 | 7 | 325 | 112 | 439 | 5.33e-21 | 93.6 |
| Msa0198310 | AT5G61520.1 | 27.616 | 344 | 208 | 13 | 7 | 325 | 160 | 487 | 6.84e-21 | 93.6 |
| Msa0198310 | AT3G51490.2 | 32.057 | 209 | 123 | 5 | 130 | 323 | 510 | 714 | 2.66e-18 | 86.3 |
| Msa0198310 | AT3G51490.2 | 40.196 | 102 | 53 | 4 | 7 | 101 | 117 | 217 | 3.66e-13 | 70.9 |
| Msa0198310 | AT4G16480.2 | 27.876 | 226 | 141 | 5 | 8 | 214 | 142 | 364 | 2.70e-18 | 86.3 |
| Msa0198310 | AT4G16480.2 | 37.374 | 99 | 61 | 1 | 229 | 326 | 459 | 557 | 2.25e-14 | 74.3 |
| Msa0198310 | AT4G16480.3 | 27.876 | 226 | 141 | 5 | 8 | 214 | 142 | 364 | 2.70e-18 | 86.3 |
| Msa0198310 | AT4G16480.3 | 37.374 | 99 | 61 | 1 | 229 | 326 | 459 | 557 | 2.25e-14 | 74.3 |
| Msa0198310 | AT4G16480.1 | 27.876 | 226 | 141 | 5 | 8 | 214 | 142 | 364 | 2.70e-18 | 86.3 |
| Msa0198310 | AT4G16480.1 | 37.374 | 99 | 61 | 1 | 229 | 326 | 459 | 557 | 2.25e-14 | 74.3 |
| Msa0198310 | AT3G51490.3 | 28.627 | 255 | 154 | 6 | 84 | 323 | 423 | 664 | 3.16e-18 | 85.9 |
| Msa0198310 | AT3G51490.3 | 40.196 | 102 | 53 | 4 | 7 | 101 | 67 | 167 | 3.65e-13 | 70.9 |
| Msa0198310 | AT1G20840.2 | 31.163 | 215 | 131 | 3 | 123 | 323 | 502 | 713 | 5.03e-18 | 85.5 |
| Msa0198310 | AT1G20840.2 | 30.935 | 139 | 76 | 4 | 7 | 126 | 115 | 252 | 1.38e-13 | 72.0 |
| Msa0198310 | AT1G20840.1 | 31.163 | 215 | 131 | 3 | 123 | 323 | 502 | 713 | 5.03e-18 | 85.5 |
| Msa0198310 | AT1G20840.1 | 30.935 | 139 | 76 | 4 | 7 | 126 | 115 | 252 | 1.38e-13 | 72.0 |
| Msa0198310 | AT2G35740.1 | 25.561 | 223 | 150 | 5 | 8 | 214 | 141 | 363 | 6.49e-18 | 85.1 |
| Msa0198310 | AT2G35740.1 | 41.414 | 99 | 57 | 1 | 229 | 326 | 458 | 556 | 4.09e-15 | 76.6 |
| Msa0198310 | AT4G35300.9 | 31.019 | 216 | 132 | 5 | 122 | 323 | 498 | 710 | 1.62e-17 | 84.0 |
| Msa0198310 | AT4G35300.2 | 31.019 | 216 | 132 | 5 | 122 | 323 | 498 | 710 | 1.62e-17 | 84.0 |
| Msa0198310 | AT4G35300.3 | 31.019 | 216 | 132 | 5 | 122 | 323 | 498 | 710 | 1.62e-17 | 84.0 |
| Msa0198310 | AT4G35300.4 | 31.019 | 216 | 132 | 5 | 122 | 323 | 508 | 720 | 1.87e-17 | 84.0 |
| Msa0198310 | AT4G35300.8 | 31.019 | 216 | 132 | 5 | 122 | 323 | 508 | 720 | 1.87e-17 | 84.0 |
| Msa0198310 | AT4G35300.6 | 31.019 | 216 | 132 | 5 | 122 | 323 | 508 | 720 | 1.87e-17 | 84.0 |
| Msa0198310 | AT4G35300.11 | 31.019 | 216 | 132 | 5 | 122 | 323 | 508 | 720 | 1.87e-17 | 84.0 |
| Msa0198310 | AT4G35300.1 | 31.019 | 216 | 132 | 5 | 122 | 323 | 508 | 720 | 1.87e-17 | 84.0 |
| Msa0198310 | AT4G35300.10 | 31.019 | 216 | 132 | 5 | 122 | 323 | 508 | 720 | 1.87e-17 | 84.0 |
| Msa0198310 | AT4G35300.7 | 31.019 | 216 | 132 | 5 | 122 | 323 | 508 | 720 | 1.87e-17 | 84.0 |
| Msa0198310 | AT4G35300.5 | 31.019 | 216 | 132 | 5 | 122 | 323 | 311 | 523 | 1.94e-17 | 83.6 |
| Msa0198310 | AT3G51490.1 | 29.600 | 250 | 150 | 6 | 84 | 323 | 473 | 706 | 1.93e-16 | 80.9 |
| Msa0198310 | AT3G51490.1 | 40.196 | 102 | 53 | 4 | 7 | 101 | 117 | 217 | 3.61e-13 | 70.9 |
| Msa0198310 | AT1G79820.3 | 23.442 | 337 | 183 | 7 | 9 | 331 | 169 | 444 | 3.41e-13 | 70.5 |
| Msa0198310 | AT1G79820.5 | 23.145 | 337 | 184 | 7 | 9 | 331 | 107 | 382 | 6.24e-13 | 69.3 |
Find 102 sgRNAs with CRISPR-Local
Find 191 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCCACTGCTGTGTTGCTTC+TGG | 0.130660 | 2_1:+16896605 | Msa0198310:CDS |
| CTTGGTTTCAATTAGGTATC+TGG | 0.196736 | 2_1:+16897805 | Msa0198310:intron |
| CTTATGGTTTGCCAGCAATT+AGG | 0.210158 | 2_1:+16897270 | Msa0198310:CDS |
| GATATTTCCAGTCAATATTA+AGG | 0.214954 | 2_1:+16898468 | Msa0198310:intron |
| TTATGGTTTGCCAGCAATTA+GGG | 0.246534 | 2_1:+16897271 | Msa0198310:CDS |
| AGGGCACCTCGGAGTTCTTT+TGG | 0.268637 | 2_1:-16896245 | None:intergenic |
| GTGTAGTGTTTGGTGGAAAT+TGG | 0.274589 | 2_1:+16898859 | Msa0198310:three_prime_UTR |
| TTAGATGTGTTACATATATA+AGG | 0.279239 | 2_1:+16896196 | None:intergenic |
| CCCACTGCTGTGTTGCTTCT+GGG | 0.289747 | 2_1:+16896606 | Msa0198310:CDS |
| GCAACACAGCAGTGGGAATA+AGG | 0.301338 | 2_1:-16896599 | None:intergenic |
| GTCCCAGCACTTGCCGTAAC+TGG | 0.304986 | 2_1:+16897983 | Msa0198310:CDS |
| GCAAACTTCCTACGCGATAA+TGG | 0.308259 | 2_1:-16898831 | None:intergenic |
| GTATCAGTGTCATTCATAAT+TGG | 0.311203 | 2_1:+16896413 | Msa0198310:CDS |
| GGAAATGCATTATACTATTA+AGG | 0.312683 | 2_1:-16899046 | None:intergenic |
| AGGCCGGAAGCCACTACTTT+TGG | 0.317735 | 2_1:+16897703 | Msa0198310:CDS |
| TAAAAGCCTTGAACAATTAC+AGG | 0.318980 | 2_1:+16898805 | Msa0198310:CDS |
| ACATGTGGTTTCATAAAGAA+TGG | 0.363136 | 2_1:+16899096 | Msa0198310:three_prime_UTR |
| TAATTGGAACAGTACTTTCA+TGG | 0.363139 | 2_1:+16896429 | Msa0198310:CDS |
| GTAGATTGGAGTAGGGCTTA+TGG | 0.368425 | 2_1:+16897254 | Msa0198310:intron |
| TTCAATTAGGTATCTGGATC+AGG | 0.372298 | 2_1:+16897811 | Msa0198310:intron |
| TGAAGAGGCAGAAGAAATTC+AGG | 0.379612 | 2_1:+16896836 | Msa0198310:CDS |
| ACTTGCCGTAACTGGCATAT+TGG | 0.383471 | 2_1:+16897991 | Msa0198310:CDS |
| TATAATATACGCTATCCTTC+AGG | 0.395137 | 2_1:+16897546 | Msa0198310:CDS |
| TTACCAAAAGTAGTGGCTTC+CGG | 0.404414 | 2_1:-16897706 | None:intergenic |
| ATACCTGATTTAAGGTAGTC+AGG | 0.404425 | 2_1:-16896265 | None:intergenic |
| CTCATGAGTTGGAGCTCCTA+TGG | 0.410624 | 2_1:+16898562 | Msa0198310:CDS |
| TTATTACTTACCAGCCATCT+AGG | 0.415487 | 2_1:-16896651 | None:intergenic |
| TGGAGGGCTTTAGCTATAAT+CGG | 0.425528 | 2_1:+16896449 | Msa0198310:CDS |
| TGCCCTGACTACCTTAAATC+AGG | 0.427867 | 2_1:+16896262 | Msa0198310:CDS |
| TGGCTGCCTGTAATTGTTCA+AGG | 0.428537 | 2_1:-16898811 | None:intergenic |
| ATGCCAGTTACGGCAAGTGC+TGG | 0.435143 | 2_1:-16897986 | None:intergenic |
| TCATTCCAGAGTCTCCTAGA+TGG | 0.435503 | 2_1:+16896637 | Msa0198310:CDS |
| CTTTCAACTTTCTCATGAGT+TGG | 0.435734 | 2_1:+16898551 | Msa0198310:CDS |
| TCTGGATCAGGATTGGTTGC+AGG | 0.437259 | 2_1:+16897823 | Msa0198310:CDS |
| GCATAGCAACATTAGTGAAC+TGG | 0.437404 | 2_1:+16898503 | Msa0198310:CDS |
| CTTCATGAGTAGATTGGAGT+AGG | 0.442194 | 2_1:+16897246 | Msa0198310:intron |
| ATATTTCCAGTCAATATTAA+GGG | 0.442648 | 2_1:+16898469 | Msa0198310:CDS |
| TGTAACAAATCCAGCACCTT+CGG | 0.447034 | 2_1:-16897009 | None:intergenic |
| GTCAATATTAAGGGGCAGGC+AGG | 0.454849 | 2_1:+16898478 | Msa0198310:CDS |
| ACAAATTATAATCAAAATCA+TGG | 0.458705 | 2_1:-16898976 | None:intergenic |
| TGAAACCACATGTTAAATCA+AGG | 0.459071 | 2_1:-16899086 | None:intergenic |
| ATAGGATTTCCTTCTGCGAC+GGG | 0.459192 | 2_1:+16897520 | Msa0198310:intron |
| GCAACATTAGTGAACTGGTT+TGG | 0.459624 | 2_1:+16898508 | Msa0198310:CDS |
| TCCGGCCTGCTCTATCTATG+AGG | 0.461836 | 2_1:-16897688 | None:intergenic |
| ATCAAGGAGGGAATTCGTAG+GGG | 0.462019 | 2_1:-16899070 | None:intergenic |
| CATGAGAAAGTTGAAAGTAT+AGG | 0.464787 | 2_1:-16898545 | None:intergenic |
| TTTGCGATTTGTGTAGTGTT+TGG | 0.466010 | 2_1:+16898849 | Msa0198310:three_prime_UTR |
| TCCAGTCAATATTAAGGGGC+AGG | 0.473585 | 2_1:+16898474 | Msa0198310:CDS |
| GCTCGCAAAACCGAAGGTGC+TGG | 0.477284 | 2_1:+16896999 | Msa0198310:CDS |
| GCCTGCCCCTTAATATTGAC+TGG | 0.493013 | 2_1:-16898475 | None:intergenic |
| GCGATTTGTGTAGTGTTTGG+TGG | 0.502161 | 2_1:+16898852 | Msa0198310:three_prime_UTR |
| TCAAGGAGGGAATTCGTAGG+GGG | 0.513902 | 2_1:-16899069 | None:intergenic |
| CCATACCAATATGCCAGTTA+CGG | 0.517135 | 2_1:-16897996 | None:intergenic |
| TTAGGTATCTGGATCAGGAT+TGG | 0.517795 | 2_1:+16897816 | Msa0198310:intron |
| TCCCTCCTTGATTTAACATG+TGG | 0.518704 | 2_1:+16899081 | Msa0198310:three_prime_UTR |
| TCCAGAGTCTCCTAGATGGC+TGG | 0.523060 | 2_1:+16896641 | Msa0198310:CDS |
| CAGATTGTGATCACAGGTGT+TGG | 0.523824 | 2_1:+16897659 | Msa0198310:intron |
| TAGGAATGGGAGCAATTCCA+TGG | 0.529632 | 2_1:+16898138 | Msa0198310:CDS |
| TGCCAGTTACGGCAAGTGCT+GGG | 0.531195 | 2_1:-16897985 | None:intergenic |
| TGGAACAGTACTTTCATGGA+GGG | 0.532101 | 2_1:+16896433 | Msa0198310:CDS |
| TTCATGAGTAGATTGGAGTA+GGG | 0.538540 | 2_1:+16897247 | Msa0198310:intron |
| ACCAGCCATCTAGGAGACTC+TGG | 0.543206 | 2_1:-16896642 | None:intergenic |
| CATAGGATTTCCTTCTGCGA+CGG | 0.543429 | 2_1:+16897519 | Msa0198310:intron |
| ACAGGTTCATGATGTGGCTG+TGG | 0.549609 | 2_1:+16897955 | Msa0198310:intron |
| TGCTGATATTAGGTCTACAT+AGG | 0.553729 | 2_1:+16898104 | Msa0198310:intron |
| TTTGAATTTACCAAAAGTAG+TGG | 0.554019 | 2_1:-16897713 | None:intergenic |
| CCGGCCTGCTCTATCTATGA+GGG | 0.555047 | 2_1:-16897687 | None:intergenic |
| TAGTGAACTGGTTTGGTGCA+TGG | 0.558886 | 2_1:+16898515 | Msa0198310:CDS |
| ACCTCGGACATCACAACCCA+TGG | 0.560460 | 2_1:-16898155 | None:intergenic |
| TACCTGATTTAAGGTAGTCA+GGG | 0.563340 | 2_1:-16896264 | None:intergenic |
| CAAGGAGGGAATTCGTAGGG+GGG | 0.563710 | 2_1:-16899068 | None:intergenic |
| ATTATACTCCCCGTCGCAGA+AGG | 0.566503 | 2_1:-16897529 | None:intergenic |
| AGCAGTTGCATTCTATCTCA+AGG | 0.573615 | 2_1:+16897858 | Msa0198310:CDS |
| AGATGCTGATATATCTGAAG+AGG | 0.576120 | 2_1:+16896821 | Msa0198310:CDS |
| ACCCAGAAGCAACACAGCAG+TGG | 0.576369 | 2_1:-16896607 | None:intergenic |
| CCCAGAAGCAACACAGCAGT+GGG | 0.578353 | 2_1:-16896606 | None:intergenic |
| AATCAAGGAGGGAATTCGTA+GGG | 0.578579 | 2_1:-16899071 | None:intergenic |
| GCAATTTCTGCTACGAACAC+AGG | 0.587269 | 2_1:-16896221 | None:intergenic |
| AAGGAGGGAATTCGTAGGGG+GGG | 0.587854 | 2_1:-16899067 | None:intergenic |
| TATTTCCAGTCAATATTAAG+GGG | 0.587860 | 2_1:+16898470 | Msa0198310:CDS |
| GCAGCCCTCATAGATAGAGC+AGG | 0.590573 | 2_1:+16897683 | Msa0198310:CDS |
| AAATCAAGGAGGGAATTCGT+AGG | 0.594919 | 2_1:-16899072 | None:intergenic |
| GGTGGAAATTGGAACAACAA+AGG | 0.604202 | 2_1:+16898870 | Msa0198310:three_prime_UTR |
| ATGGTTTGCCAGCAATTAGG+GGG | 0.608563 | 2_1:+16897273 | Msa0198310:CDS |
| CAGGTTCATGATGTGGCTGT+GGG | 0.612693 | 2_1:+16897956 | Msa0198310:intron |
| ACCACATGTTAAATCAAGGA+GGG | 0.613521 | 2_1:-16899082 | None:intergenic |
| CCCTCATAGATAGAGCAGGC+CGG | 0.622479 | 2_1:+16897687 | Msa0198310:CDS |
| TAATGAATGCAGGCAAAGCG+AGG | 0.623838 | 2_1:+16896753 | Msa0198310:intron |
| ACAGGCAGCCATTATCGCGT+AGG | 0.629676 | 2_1:+16898823 | Msa0198310:CDS |
| TATGGTTTGCCAGCAATTAG+GGG | 0.634878 | 2_1:+16897272 | Msa0198310:CDS |
| AGAACAGCTCGCAAAACCGA+AGG | 0.635960 | 2_1:+16896993 | Msa0198310:CDS |
| GCAGCATTACAAATACTTCG+CGG | 0.650248 | 2_1:+16896795 | Msa0198310:CDS |
| GTAGTAGTCCCAGAAACCAA+AGG | 0.657750 | 2_1:+16898782 | Msa0198310:CDS |
| TTGGAACAGTACTTTCATGG+AGG | 0.660408 | 2_1:+16896432 | Msa0198310:CDS |
| TAGGATTTCCTTCTGCGACG+GGG | 0.661364 | 2_1:+16897521 | Msa0198310:intron |
| AACCACATGTTAAATCAAGG+AGG | 0.666340 | 2_1:-16899083 | None:intergenic |
| TTAAGGTAGTCAGGGCACCT+CGG | 0.669152 | 2_1:-16896256 | None:intergenic |
| TATGTAACAGGTTCATGATG+TGG | 0.670944 | 2_1:+16897949 | Msa0198310:intron |
| AGGAATGGGAGCAATTCCAT+GGG | 0.675398 | 2_1:+16898139 | Msa0198310:CDS |
| GATTGCAGCGTAAAGAACGA+AGG | 0.710685 | 2_1:-16898732 | None:intergenic |
| TCCATGGGTTGTGATGTCCG+AGG | 0.731376 | 2_1:+16898154 | Msa0198310:CDS |
| ATTGCGCCAAAAGAACTCCG+AGG | 0.763517 | 2_1:+16896239 | Msa0198310:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATCAATTTTACATAAATATT+AGG | - | chr2_1:16897924-16897943 | None:intergenic | 10.0% |
| !!! | ATTTTGATTATAATTTGTAT+TGG | + | chr2_1:16898981-16899000 | Msa0198310:three_prime_UTR | 10.0% |
| !!! | TTTATTTTGTTTTGGTTTAT+TGG | + | chr2_1:16897485-16897504 | Msa0198310:intron | 15.0% |
| !! | ATTAACCAATAATTAATTCT+TGG | + | chr2_1:16897582-16897601 | Msa0198310:intron | 15.0% |
| !!! | ATTTTCCAAGAATTAATTAT+TGG | - | chr2_1:16897590-16897609 | None:intergenic | 15.0% |
| !!! | TACTTTTATTTATGATTTTC+AGG | + | chr2_1:16898707-16898726 | Msa0198310:intron | 15.0% |
| !! | ACAAATTATAATCAAAATCA+TGG | - | chr2_1:16898979-16898998 | None:intergenic | 15.0% |
| !! | AGAAAAATATACCTGATTTA+AGG | - | chr2_1:16896276-16896295 | None:intergenic | 20.0% |
| !!! | CTCAGATTTTTATTTTGTTT+TGG | + | chr2_1:16897477-16897496 | Msa0198310:intron | 20.0% |
| !! | ATTTAAAAATAAGAACCTGA+AGG | - | chr2_1:16897564-16897583 | None:intergenic | 20.0% |
| !!! | ATACTCTTATTGTTATTTCT+TGG | + | chr2_1:16897787-16897806 | Msa0198310:intron | 20.0% |
| !! | TTGATATTAAAAACTGAAAG+TGG | - | chr2_1:16898198-16898217 | None:intergenic | 20.0% |
| !! | ATATTTCCAGTCAATATTAA+GGG | + | chr2_1:16898469-16898488 | Msa0198310:CDS | 20.0% |
| !! | AATGTATTAGTATTTACCAT+AGG | - | chr2_1:16898581-16898600 | None:intergenic | 20.0% |
| !! | TGATTATCGTATAATAATTC+TGG | - | chr2_1:16898646-16898665 | None:intergenic | 20.0% |
| ! | CAGCTTAATTGCATTATATT+TGG | - | chr2_1:16896933-16896952 | None:intergenic | 25.0% |
| ! | CAAATATAATGCAATTAAGC+TGG | + | chr2_1:16896931-16896950 | Msa0198310:intron | 25.0% |
| ! | AATAGAACAAATATGAGAAG+TGG | - | chr2_1:16897177-16897196 | None:intergenic | 25.0% |
| !! | AGGAAGATGAAAATTTTGAA+TGG | - | chr2_1:16897220-16897239 | None:intergenic | 25.0% |
| ! | ATCTACTCATGAAGAAAAAT+AGG | - | chr2_1:16897240-16897259 | None:intergenic | 25.0% |
| !! | ATTTTTCTTCATGAGTAGAT+TGG | + | chr2_1:16897240-16897259 | Msa0198310:intron | 25.0% |
| !!! | TATTGGTGTATTTTTGTCAT+AGG | + | chr2_1:16897502-16897521 | Msa0198310:intron | 25.0% |
| ! | AATAAAAATCATGACTGAGT+TGG | - | chr2_1:16897635-16897654 | None:intergenic | 25.0% |
| ! | TTTGAATTTACCAAAAGTAG+TGG | - | chr2_1:16897716-16897735 | None:intergenic | 25.0% |
| !!! | GTTATTTCTTGGTTTCAATT+AGG | + | chr2_1:16897798-16897817 | Msa0198310:intron | 25.0% |
| ! | AATTGATATCCTTATGTAAC+AGG | + | chr2_1:16897937-16897956 | Msa0198310:intron | 25.0% |
| !! | TTTTTCTTTTTCTTTGACCA+GGG | + | chr2_1:16898328-16898347 | Msa0198310:intron | 25.0% |
| ! | GATATTTCCAGTCAATATTA+AGG | + | chr2_1:16898468-16898487 | Msa0198310:intron | 25.0% |
| ! | TATTTCCAGTCAATATTAAG+GGG | + | chr2_1:16898470-16898489 | Msa0198310:CDS | 25.0% |
| !! | ATTGGTTTCTTGAACTAAAT+GGG | - | chr2_1:16898673-16898692 | None:intergenic | 25.0% |
| !!! | TATTGGTTTCTTGAACTAAA+TGG | - | chr2_1:16898674-16898693 | None:intergenic | 25.0% |
| ! | GGAAATGCATTATACTATTA+AGG | - | chr2_1:16899049-16899068 | None:intergenic | 25.0% |
| ! | GTATCAGTGTCATTCATAAT+TGG | + | chr2_1:16896413-16896432 | Msa0198310:CDS | 30.0% |
| TAATTGGAACAGTACTTTCA+TGG | + | chr2_1:16896429-16896448 | Msa0198310:CDS | 30.0% | |
| TCATATGATCTTCTTCTTAG+TGG | - | chr2_1:16896505-16896524 | None:intergenic | 30.0% | |
| ATTTAGATGAAAACATGCAG+TGG | + | chr2_1:16896690-16896709 | Msa0198310:intron | 30.0% | |
| ! | TTCATTATTTGGTTGGTACT+TGG | - | chr2_1:16896740-16896759 | None:intergenic | 30.0% |
| ACTAGTTATATAATCCTGTG+TGG | - | chr2_1:16896971-16896990 | None:intergenic | 30.0% | |
| AAATGAACTGATATTCAGAG+TGG | - | chr2_1:16897076-16897095 | None:intergenic | 30.0% | |
| ! | ATTTTCTTCAAGAATGTGTG+TGG | + | chr2_1:16897092-16897111 | Msa0198310:intron | 30.0% |
| AGAGGTGGAAAATAAAGTAT+TGG | + | chr2_1:16897130-16897149 | Msa0198310:intron | 30.0% | |
| !! | AGTAGTATTTTTGATCTAGC+AGG | + | chr2_1:16897321-16897340 | Msa0198310:CDS | 30.0% |
| TATAATATACGCTATCCTTC+AGG | + | chr2_1:16897546-16897565 | Msa0198310:CDS | 30.0% | |
| !! | TAAGAGTATCATACATGAAG+CGG | - | chr2_1:16897776-16897795 | None:intergenic | 30.0% |
| AAGCTGTAAAGTTCTTAGTT+GGG | - | chr2_1:16897889-16897908 | None:intergenic | 30.0% | |
| ! | CTCTTTCATTTGCTGATATT+AGG | + | chr2_1:16898094-16898113 | Msa0198310:intron | 30.0% |
| ! | TACATAGGATCGTTTTCAAT+AGG | + | chr2_1:16898119-16898138 | Msa0198310:CDS | 30.0% |
| TAAAAACTGAAAGTGGAGAA+AGG | - | chr2_1:16898191-16898210 | None:intergenic | 30.0% | |
| !!! | TTAAGTGCAACTCTTGTTTT+TGG | - | chr2_1:16898275-16898294 | None:intergenic | 30.0% |
| AAAAGAAAAACAGTTCCAGT+CGG | - | chr2_1:16898318-16898337 | None:intergenic | 30.0% | |
| ! | GTTTTTCTTTTTCTTTGACC+AGG | + | chr2_1:16898327-16898346 | Msa0198310:intron | 30.0% |
| ! | TTTTCTTTTTCTTTGACCAG+GGG | + | chr2_1:16898329-16898348 | Msa0198310:intron | 30.0% |
| ! | CATGAGAAAGTTGAAAGTAT+AGG | - | chr2_1:16898548-16898567 | None:intergenic | 30.0% |
| AGTAAACTTGCATGTTCTAT+TGG | - | chr2_1:16898691-16898710 | None:intergenic | 30.0% | |
| TAAAAGCCTTGAACAATTAC+AGG | + | chr2_1:16898805-16898824 | Msa0198310:CDS | 30.0% | |
| CCAACAGACTATAAAAAACA+AGG | - | chr2_1:16898927-16898946 | None:intergenic | 30.0% | |
| !!! | CCTTGTTTTTTATAGTCTGT+TGG | + | chr2_1:16898924-16898943 | Msa0198310:three_prime_UTR | 30.0% |
| TGAAACCACATGTTAAATCA+AGG | - | chr2_1:16899089-16899108 | None:intergenic | 30.0% | |
| ACATGTGGTTTCATAAAGAA+TGG | + | chr2_1:16899096-16899115 | Msa0198310:three_prime_UTR | 30.0% | |
| ! | TACCTGATTTAAGGTAGTCA+GGG | - | chr2_1:16896267-16896286 | None:intergenic | 35.0% |
| ! | ATACCTGATTTAAGGTAGTC+AGG | - | chr2_1:16896268-16896287 | None:intergenic | 35.0% |
| AAATGAGTGTTTGCAATTGC+AGG | + | chr2_1:16896576-16896595 | Msa0198310:intron | 35.0% | |
| TTATTACTTACCAGCCATCT+AGG | - | chr2_1:16896654-16896673 | None:intergenic | 35.0% | |
| ACCAACCAAATAATGAATGC+AGG | + | chr2_1:16896743-16896762 | Msa0198310:intron | 35.0% | |
| CTTTGCCTGCATTCATTATT+TGG | - | chr2_1:16896751-16896770 | None:intergenic | 35.0% | |
| AGATGCTGATATATCTGAAG+AGG | + | chr2_1:16896821-16896840 | Msa0198310:CDS | 35.0% | |
| GTCTTTATTATTGTGCCTGA+AGG | - | chr2_1:16896904-16896923 | None:intergenic | 35.0% | |
| TTCATGAGTAGATTGGAGTA+GGG | + | chr2_1:16897247-16897266 | Msa0198310:intron | 35.0% | |
| ! | TTATGGTTTGCCAGCAATTA+GGG | + | chr2_1:16897271-16897290 | Msa0198310:CDS | 35.0% |
| ! | AAGCATGATGGTGTTAAACT+TGG | - | chr2_1:16897377-16897396 | None:intergenic | 35.0% |
| ! | TGATATGCAAGAAAGCATGA+TGG | - | chr2_1:16897389-16897408 | None:intergenic | 35.0% |
| ! | TTTTCACAGATTGTGATCAC+AGG | + | chr2_1:16897653-16897672 | Msa0198310:intron | 35.0% |
| CTTGGTTTCAATTAGGTATC+TGG | + | chr2_1:16897805-16897824 | Msa0198310:intron | 35.0% | |
| TTCAATTAGGTATCTGGATC+AGG | + | chr2_1:16897811-16897830 | Msa0198310:intron | 35.0% | |
| GAAGCTGTAAAGTTCTTAGT+TGG | - | chr2_1:16897890-16897909 | None:intergenic | 35.0% | |
| CATCATGAACCTGTTACATA+AGG | - | chr2_1:16897949-16897968 | None:intergenic | 35.0% | |
| TATGTAACAGGTTCATGATG+TGG | + | chr2_1:16897949-16897968 | Msa0198310:intron | 35.0% | |
| AATGAAAGAGCAGTGTTACA+TGG | - | chr2_1:16898084-16898103 | None:intergenic | 35.0% | |
| TGCTGATATTAGGTCTACAT+AGG | + | chr2_1:16898104-16898123 | Msa0198310:intron | 35.0% | |
| ! | AGGATCGTTTTCAATAGGAA+TGG | + | chr2_1:16898124-16898143 | Msa0198310:CDS | 35.0% |
| ! | GGATCGTTTTCAATAGGAAT+GGG | + | chr2_1:16898125-16898144 | Msa0198310:CDS | 35.0% |
| AAAGAAAAACAGTTCCAGTC+GGG | - | chr2_1:16898317-16898336 | None:intergenic | 35.0% | |
| TAAATCAACTTCGAATTCGC+CGG | + | chr2_1:16898379-16898398 | Msa0198310:intron | 35.0% | |
| ! | AAGAGGACACATTTTGTAAC+CGG | - | chr2_1:16898401-16898420 | None:intergenic | 35.0% |
| GTGTCCTCTTAGTAAAAAGA+CGG | + | chr2_1:16898411-16898430 | Msa0198310:intron | 35.0% | |
| ! | TATGCCGTCTTTTTACTAAG+AGG | - | chr2_1:16898418-16898437 | None:intergenic | 35.0% |
| CTGGAAATATCTGCAACATA+AGG | - | chr2_1:16898459-16898478 | None:intergenic | 35.0% | |
| CTTTCAACTTTCTCATGAGT+TGG | + | chr2_1:16898551-16898570 | Msa0198310:CDS | 35.0% | |
| ! | TTGTTCAAGGCTTTTACCTT+TGG | - | chr2_1:16898801-16898820 | None:intergenic | 35.0% |
| TTTGCGATTTGTGTAGTGTT+TGG | + | chr2_1:16898849-16898868 | Msa0198310:three_prime_UTR | 35.0% | |
| ACCACATGTTAAATCAAGGA+GGG | - | chr2_1:16899085-16899104 | None:intergenic | 35.0% | |
| AACCACATGTTAAATCAAGG+AGG | - | chr2_1:16899086-16899105 | None:intergenic | 35.0% | |
| TTGGAACAGTACTTTCATGG+AGG | + | chr2_1:16896432-16896451 | Msa0198310:CDS | 40.0% | |
| TGGAACAGTACTTTCATGGA+GGG | + | chr2_1:16896433-16896452 | Msa0198310:CDS | 40.0% | |
| ! | TGGAGGGCTTTAGCTATAAT+CGG | + | chr2_1:16896449-16896468 | Msa0198310:CDS | 40.0% |
| GCCTGCATTCATTATTTGGT+TGG | - | chr2_1:16896747-16896766 | None:intergenic | 40.0% | |
| ! | AGGACGCACAAAAGATTTTG+TGG | + | chr2_1:16896773-16896792 | Msa0198310:CDS | 40.0% |
| GCAGCATTACAAATACTTCG+CGG | + | chr2_1:16896795-16896814 | Msa0198310:CDS | 40.0% | |
| TGAAGAGGCAGAAGAAATTC+AGG | + | chr2_1:16896836-16896855 | Msa0198310:CDS | 40.0% | |
| AGGTAACTGTGTGTTAGTGT+TGG | + | chr2_1:16896856-16896875 | Msa0198310:intron | 40.0% | |
| TATTAAGTGACCTTGCCTTC+AGG | + | chr2_1:16896886-16896905 | Msa0198310:intron | 40.0% | |
| TATTATTGTGCCTGAAGGCA+AGG | - | chr2_1:16896899-16896918 | None:intergenic | 40.0% | |
| TGTAACAAATCCAGCACCTT+CGG | - | chr2_1:16897012-16897031 | None:intergenic | 40.0% | |
| TTCTTCAAGAATGTGTGTGG+TGG | + | chr2_1:16897095-16897114 | Msa0198310:intron | 40.0% | |
| CTTCATGAGTAGATTGGAGT+AGG | + | chr2_1:16897246-16897265 | Msa0198310:intron | 40.0% | |
| ! | CTTATGGTTTGCCAGCAATT+AGG | + | chr2_1:16897270-16897289 | Msa0198310:CDS | 40.0% |
| ! | TATGGTTTGCCAGCAATTAG+GGG | + | chr2_1:16897272-16897291 | Msa0198310:CDS | 40.0% |
| TTACCAAAAGTAGTGGCTTC+CGG | - | chr2_1:16897709-16897728 | None:intergenic | 40.0% | |
| TTAGGTATCTGGATCAGGAT+TGG | + | chr2_1:16897816-16897835 | Msa0198310:intron | 40.0% | |
| AGCAGTTGCATTCTATCTCA+AGG | + | chr2_1:16897858-16897877 | Msa0198310:CDS | 40.0% | |
| CCATACCAATATGCCAGTTA+CGG | - | chr2_1:16897999-16898018 | None:intergenic | 40.0% | |
| ACTGAAAGTGGAGAAAGGAT+GGG | - | chr2_1:16898186-16898205 | None:intergenic | 40.0% | |
| AACTGAAAGTGGAGAAAGGA+TGG | - | chr2_1:16898187-16898206 | None:intergenic | 40.0% | |
| AAGAAAAACAGTTCCAGTCG+GGG | - | chr2_1:16898316-16898335 | None:intergenic | 40.0% | |
| GCATAGCAACATTAGTGAAC+TGG | + | chr2_1:16898503-16898522 | Msa0198310:CDS | 40.0% | |
| GCAACATTAGTGAACTGGTT+TGG | + | chr2_1:16898508-16898527 | Msa0198310:CDS | 40.0% | |
| !! | GGCTTTTACCTTTGGTTTCT+GGG | - | chr2_1:16898793-16898812 | None:intergenic | 40.0% |
| !! | AGGCTTTTACCTTTGGTTTC+TGG | - | chr2_1:16898794-16898813 | None:intergenic | 40.0% |
| ! | GTGTAGTGTTTGGTGGAAAT+TGG | + | chr2_1:16898859-16898878 | Msa0198310:three_prime_UTR | 40.0% |
| GGTGGAAATTGGAACAACAA+AGG | + | chr2_1:16898870-16898889 | Msa0198310:three_prime_UTR | 40.0% | |
| AATCAAGGAGGGAATTCGTA+GGG | - | chr2_1:16899074-16899093 | None:intergenic | 40.0% | |
| AAATCAAGGAGGGAATTCGT+AGG | - | chr2_1:16899075-16899094 | None:intergenic | 40.0% | |
| TCCCTCCTTGATTTAACATG+TGG | + | chr2_1:16899081-16899100 | Msa0198310:three_prime_UTR | 40.0% | |
| GCAATTTCTGCTACGAACAC+AGG | - | chr2_1:16896224-16896243 | None:intergenic | 45.0% | |
| TGCCCTGACTACCTTAAATC+AGG | + | chr2_1:16896262-16896281 | Msa0198310:CDS | 45.0% | |
| TCATTCCAGAGTCTCCTAGA+TGG | + | chr2_1:16896637-16896656 | Msa0198310:CDS | 45.0% | |
| TAATGAATGCAGGCAAAGCG+AGG | + | chr2_1:16896753-16896772 | Msa0198310:intron | 45.0% | |
| !! | AATGTGTGTGGTGGACTACT+AGG | + | chr2_1:16897104-16897123 | Msa0198310:intron | 45.0% |
| GTAGATTGGAGTAGGGCTTA+TGG | + | chr2_1:16897254-16897273 | Msa0198310:intron | 45.0% | |
| ! | ATGGTTTGCCAGCAATTAGG+GGG | + | chr2_1:16897273-16897292 | Msa0198310:CDS | 45.0% |
| !! | CATTGATTCCCCCTAATTGC+TGG | - | chr2_1:16897284-16897303 | None:intergenic | 45.0% |
| CAGCAATTAGGGGGAATCAA+TGG | + | chr2_1:16897282-16897301 | Msa0198310:CDS | 45.0% | |
| CATAGGATTTCCTTCTGCGA+CGG | + | chr2_1:16897519-16897538 | Msa0198310:intron | 45.0% | |
| ATAGGATTTCCTTCTGCGAC+GGG | + | chr2_1:16897520-16897539 | Msa0198310:intron | 45.0% | |
| ! | CATGACTGAGTTGGATTCGA+GGG | - | chr2_1:16897626-16897645 | None:intergenic | 45.0% |
| ! | TCATGACTGAGTTGGATTCG+AGG | - | chr2_1:16897627-16897646 | None:intergenic | 45.0% |
| CAGATTGTGATCACAGGTGT+TGG | + | chr2_1:16897659-16897678 | Msa0198310:intron | 45.0% | |
| ACTTGCCGTAACTGGCATAT+TGG | + | chr2_1:16897991-16898010 | Msa0198310:CDS | 45.0% | |
| CCGTAACTGGCATATTGGTA+TGG | + | chr2_1:16897996-16898015 | Msa0198310:intron | 45.0% | |
| TAGGAATGGGAGCAATTCCA+TGG | + | chr2_1:16898138-16898157 | Msa0198310:CDS | 45.0% | |
| AGGAATGGGAGCAATTCCAT+GGG | + | chr2_1:16898139-16898158 | Msa0198310:CDS | 45.0% | |
| CTGAAAGTGGAGAAAGGATG+GGG | - | chr2_1:16898185-16898204 | None:intergenic | 45.0% | |
| ! | TCTTTTTCTTTGACCAGGGG+AGG | + | chr2_1:16898332-16898351 | Msa0198310:intron | 45.0% |
| TGCATAAATAGATCCTCCCC+TGG | - | chr2_1:16898348-16898367 | None:intergenic | 45.0% | |
| TCCAGTCAATATTAAGGGGC+AGG | + | chr2_1:16898474-16898493 | Msa0198310:CDS | 45.0% | |
| !! | TAGTGAACTGGTTTGGTGCA+TGG | + | chr2_1:16898515-16898534 | Msa0198310:CDS | 45.0% |
| GATTGCAGCGTAAAGAACGA+AGG | - | chr2_1:16898735-16898754 | None:intergenic | 45.0% | |
| GTAGTAGTCCCAGAAACCAA+AGG | + | chr2_1:16898782-16898801 | Msa0198310:CDS | 45.0% | |
| TGGCTGCCTGTAATTGTTCA+AGG | - | chr2_1:16898814-16898833 | None:intergenic | 45.0% | |
| GCAAACTTCCTACGCGATAA+TGG | - | chr2_1:16898834-16898853 | None:intergenic | 45.0% | |
| GCGATTTGTGTAGTGTTTGG+TGG | + | chr2_1:16898852-16898871 | Msa0198310:three_prime_UTR | 45.0% | |
| ATCAAGGAGGGAATTCGTAG+GGG | - | chr2_1:16899073-16899092 | None:intergenic | 45.0% | |
| ATTGCGCCAAAAGAACTCCG+AGG | + | chr2_1:16896239-16896258 | Msa0198310:CDS | 50.0% | |
| ! | TTAAGGTAGTCAGGGCACCT+CGG | - | chr2_1:16896259-16896278 | None:intergenic | 50.0% |
| GCAACACAGCAGTGGGAATA+AGG | - | chr2_1:16896602-16896621 | None:intergenic | 50.0% | |
| TGTATCTGTCACTGCCACAC+AGG | + | chr2_1:16896954-16896973 | Msa0198310:intron | 50.0% | |
| AGAACAGCTCGCAAAACCGA+AGG | + | chr2_1:16896993-16897012 | Msa0198310:CDS | 50.0% | |
| !! | TGGTGGACTACTAGGTTGAG+AGG | + | chr2_1:16897112-16897131 | Msa0198310:intron | 50.0% |
| ! | TGGACTACTAGGTTGAGAGG+TGG | + | chr2_1:16897115-16897134 | Msa0198310:intron | 50.0% |
| TAGGATTTCCTTCTGCGACG+GGG | + | chr2_1:16897521-16897540 | Msa0198310:intron | 50.0% | |
| ATTATACTCCCCGTCGCAGA+AGG | - | chr2_1:16897532-16897551 | None:intergenic | 50.0% | |
| !! | TCTGGATCAGGATTGGTTGC+AGG | + | chr2_1:16897823-16897842 | Msa0198310:CDS | 50.0% |
| ACAGGTTCATGATGTGGCTG+TGG | + | chr2_1:16897955-16897974 | Msa0198310:intron | 50.0% | |
| CAGGTTCATGATGTGGCTGT+GGG | + | chr2_1:16897956-16897975 | Msa0198310:intron | 50.0% | |
| !! | GAAAGGATGGGGAAGTACCT+CGG | - | chr2_1:16898174-16898193 | None:intergenic | 50.0% |
| AGCAAATGTTGATCCCCGAC+TGG | + | chr2_1:16898300-16898319 | Msa0198310:intron | 50.0% | |
| GCCTGCCCCTTAATATTGAC+TGG | - | chr2_1:16898478-16898497 | None:intergenic | 50.0% | |
| GTCAATATTAAGGGGCAGGC+AGG | + | chr2_1:16898478-16898497 | Msa0198310:CDS | 50.0% | |
| ! | CTCATGAGTTGGAGCTCCTA+TGG | + | chr2_1:16898562-16898581 | Msa0198310:CDS | 50.0% |
| TCAAGGAGGGAATTCGTAGG+GGG | - | chr2_1:16899072-16899091 | None:intergenic | 50.0% | |
| !! | AGGGCACCTCGGAGTTCTTT+TGG | - | chr2_1:16896248-16896267 | None:intergenic | 55.0% |
| !! | TCCCACTGCTGTGTTGCTTC+TGG | + | chr2_1:16896605-16896624 | Msa0198310:CDS | 55.0% |
| CCCAGAAGCAACACAGCAGT+GGG | - | chr2_1:16896609-16896628 | None:intergenic | 55.0% | |
| !! | CCCACTGCTGTGTTGCTTCT+GGG | + | chr2_1:16896606-16896625 | Msa0198310:CDS | 55.0% |
| ACCCAGAAGCAACACAGCAG+TGG | - | chr2_1:16896610-16896629 | None:intergenic | 55.0% | |
| TCCAGAGTCTCCTAGATGGC+TGG | + | chr2_1:16896641-16896660 | Msa0198310:CDS | 55.0% | |
| ACCAGCCATCTAGGAGACTC+TGG | - | chr2_1:16896645-16896664 | None:intergenic | 55.0% | |
| GCAGCCCTCATAGATAGAGC+AGG | + | chr2_1:16897683-16897702 | Msa0198310:CDS | 55.0% | |
| CCGGCCTGCTCTATCTATGA+GGG | - | chr2_1:16897690-16897709 | None:intergenic | 55.0% | |
| CCCTCATAGATAGAGCAGGC+CGG | + | chr2_1:16897687-16897706 | Msa0198310:CDS | 55.0% | |
| TCCGGCCTGCTCTATCTATG+AGG | - | chr2_1:16897691-16897710 | None:intergenic | 55.0% | |
| ! | AGGCCGGAAGCCACTACTTT+TGG | + | chr2_1:16897703-16897722 | Msa0198310:CDS | 55.0% |
| TGCCAGTTACGGCAAGTGCT+GGG | - | chr2_1:16897988-16898007 | None:intergenic | 55.0% | |
| ATGCCAGTTACGGCAAGTGC+TGG | - | chr2_1:16897989-16898008 | None:intergenic | 55.0% | |
| ! | TCCATGGGTTGTGATGTCCG+AGG | + | chr2_1:16898154-16898173 | Msa0198310:CDS | 55.0% |
| ACCTCGGACATCACAACCCA+TGG | - | chr2_1:16898158-16898177 | None:intergenic | 55.0% | |
| ACAGGCAGCCATTATCGCGT+AGG | + | chr2_1:16898823-16898842 | Msa0198310:CDS | 55.0% | |
| AAGGAGGGAATTCGTAGGGG+GGG | - | chr2_1:16899070-16899089 | None:intergenic | 55.0% | |
| CAAGGAGGGAATTCGTAGGG+GGG | - | chr2_1:16899071-16899090 | None:intergenic | 55.0% | |
| ! | GCTCGCAAAACCGAAGGTGC+TGG | + | chr2_1:16896999-16897018 | Msa0198310:CDS | 60.0% |
| GTCCCAGCACTTGCCGTAAC+TGG | + | chr2_1:16897983-16898002 | Msa0198310:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 16896200 | 16899128 | 16896200 | ID=Msa0198310;Name=Msa0198310 |
| chr2_1 | mRNA | 16896200 | 16899128 | 16896200 | ID=Msa0198310-mRNA-1;Parent=Msa0198310;Name=Msa0198310-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|1|0.92|1|1|1|13|284|331 |
| chr2_1 | exon | 16896200 | 16896283 | 16896200 | ID=Msa0198310-mRNA-1:exon:7052;Parent=Msa0198310-mRNA-1 |
| chr2_1 | exon | 16896395 | 16896470 | 16896395 | ID=Msa0198310-mRNA-1:exon:7053;Parent=Msa0198310-mRNA-1 |
| chr2_1 | exon | 16896598 | 16896662 | 16896598 | ID=Msa0198310-mRNA-1:exon:7054;Parent=Msa0198310-mRNA-1 |
| chr2_1 | exon | 16896765 | 16896857 | 16896765 | ID=Msa0198310-mRNA-1:exon:7055;Parent=Msa0198310-mRNA-1 |
| chr2_1 | exon | 16896976 | 16897056 | 16896976 | ID=Msa0198310-mRNA-1:exon:7056;Parent=Msa0198310-mRNA-1 |
| chr2_1 | exon | 16897258 | 16897342 | 16897258 | ID=Msa0198310-mRNA-1:exon:7057;Parent=Msa0198310-mRNA-1 |
| chr2_1 | exon | 16897524 | 16897567 | 16897524 | ID=Msa0198310-mRNA-1:exon:7058;Parent=Msa0198310-mRNA-1 |
| chr2_1 | exon | 16897662 | 16897724 | 16897662 | ID=Msa0198310-mRNA-1:exon:7059;Parent=Msa0198310-mRNA-1 |
| chr2_1 | exon | 16897820 | 16897879 | 16897820 | ID=Msa0198310-mRNA-1:exon:7060;Parent=Msa0198310-mRNA-1 |
| chr2_1 | exon | 16897959 | 16898012 | 16897959 | ID=Msa0198310-mRNA-1:exon:7061;Parent=Msa0198310-mRNA-1 |
| chr2_1 | exon | 16898116 | 16898175 | 16898116 | ID=Msa0198310-mRNA-1:exon:7062;Parent=Msa0198310-mRNA-1 |
| chr2_1 | exon | 16898469 | 16898583 | 16898469 | ID=Msa0198310-mRNA-1:exon:7063;Parent=Msa0198310-mRNA-1 |
| chr2_1 | exon | 16898729 | 16899128 | 16898729 | ID=Msa0198310-mRNA-1:exon:7064;Parent=Msa0198310-mRNA-1 |
| chr2_1 | CDS | 16896200 | 16896283 | 16896200 | ID=Msa0198310-mRNA-1:cds;Parent=Msa0198310-mRNA-1 |
| chr2_1 | CDS | 16896395 | 16896470 | 16896395 | ID=Msa0198310-mRNA-1:cds;Parent=Msa0198310-mRNA-1 |
| chr2_1 | CDS | 16896598 | 16896662 | 16896598 | ID=Msa0198310-mRNA-1:cds;Parent=Msa0198310-mRNA-1 |
| chr2_1 | CDS | 16896765 | 16896857 | 16896765 | ID=Msa0198310-mRNA-1:cds;Parent=Msa0198310-mRNA-1 |
| chr2_1 | CDS | 16896976 | 16897056 | 16896976 | ID=Msa0198310-mRNA-1:cds;Parent=Msa0198310-mRNA-1 |
| chr2_1 | CDS | 16897258 | 16897342 | 16897258 | ID=Msa0198310-mRNA-1:cds;Parent=Msa0198310-mRNA-1 |
| chr2_1 | CDS | 16897524 | 16897567 | 16897524 | ID=Msa0198310-mRNA-1:cds;Parent=Msa0198310-mRNA-1 |
| chr2_1 | CDS | 16897662 | 16897724 | 16897662 | ID=Msa0198310-mRNA-1:cds;Parent=Msa0198310-mRNA-1 |
| chr2_1 | CDS | 16897820 | 16897879 | 16897820 | ID=Msa0198310-mRNA-1:cds;Parent=Msa0198310-mRNA-1 |
| chr2_1 | CDS | 16897959 | 16898012 | 16897959 | ID=Msa0198310-mRNA-1:cds;Parent=Msa0198310-mRNA-1 |
| chr2_1 | CDS | 16898116 | 16898175 | 16898116 | ID=Msa0198310-mRNA-1:cds;Parent=Msa0198310-mRNA-1 |
| chr2_1 | CDS | 16898469 | 16898583 | 16898469 | ID=Msa0198310-mRNA-1:cds;Parent=Msa0198310-mRNA-1 |
| chr2_1 | CDS | 16898729 | 16898844 | 16898729 | ID=Msa0198310-mRNA-1:cds;Parent=Msa0198310-mRNA-1 |
| chr2_1 | three_prime_UTR | 16898845 | 16899128 | 16898845 | ID=Msa0198310-mRNA-1:three_prime_utr;Parent=Msa0198310-mRNA-1 |
| Gene Sequence |
| Protein sequence |
