Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0318230 | XP_013449662.3 | 89.865 | 296 | 7 | 2 | 29 | 303 | 184 | 477 | 6.56e-180 | 515 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0318230 | sp|P93051|ERDL7_ARATH | 65.472 | 307 | 83 | 2 | 17 | 302 | 158 | 462 | 1.44e-137 | 400 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0020630 | Msa0318230 | 0.804261 | 2.351149e-49 | -8.615850e-47 |
Msa0068410 | Msa0318230 | 0.808692 | 2.734057e-50 | -8.615850e-47 |
Msa0101060 | Msa0318230 | 0.808595 | 2.866865e-50 | -8.615850e-47 |
Msa0109490 | Msa0318230 | 0.805346 | 1.395377e-49 | -8.615850e-47 |
Msa0155610 | Msa0318230 | 0.801032 | 1.089985e-48 | -8.615850e-47 |
Msa0159750 | Msa0318230 | 0.803169 | 3.963080e-49 | -8.615850e-47 |
Msa0198310 | Msa0318230 | 0.867861 | 1.001462e-65 | -8.615850e-47 |
Msa0198440 | Msa0318230 | 0.835313 | 1.804902e-56 | -8.615850e-47 |
Msa0223290 | Msa0318230 | 0.801205 | 1.004752e-48 | -8.615850e-47 |
Msa0240660 | Msa0318230 | 0.866823 | 2.150240e-65 | -8.615850e-47 |
Msa0240780 | Msa0318230 | 0.824506 | 7.778260e-54 | -8.615850e-47 |
Msa0264940 | Msa0318230 | -0.817271 | 3.595053e-52 | -8.615850e-47 |
Msa0265210 | Msa0318230 | 0.814701 | 1.347254e-51 | -8.615850e-47 |
Msa0278670 | Msa0318230 | 0.835424 | 1.692171e-56 | -8.615850e-47 |
Msa0298850 | Msa0318230 | 0.801597 | 8.353457e-49 | -8.615850e-47 |
Msa0302990 | Msa0318230 | -0.819990 | 8.687799e-53 | -8.615850e-47 |
Msa0318070 | Msa0318230 | 0.831468 | 1.641262e-55 | -8.615850e-47 |
Msa0318230 | Msa0318260 | 0.963238 | 7.689734e-122 | -8.615850e-47 |
Msa0318230 | Msa0377280 | 0.824259 | 8.891156e-54 | -8.615850e-47 |
Msa0318230 | Msa0389060 | 0.803771 | 2.973439e-49 | -8.615850e-47 |
Msa0318230 | Msa0404690 | 0.825279 | 5.113016e-54 | -8.615850e-47 |
Msa0318230 | Msa0462590 | 0.829602 | 4.695843e-55 | -8.615850e-47 |
Msa0318230 | Msa0472740 | 0.813840 | 2.088132e-51 | -8.615850e-47 |
Msa0318230 | Msa0530950 | 0.827501 | 1.511308e-54 | -8.615850e-47 |
Msa0318230 | Msa0600820 | 0.802742 | 4.855167e-49 | -8.615850e-47 |
Msa0318230 | Msa0628100 | 0.809130 | 2.202468e-50 | -8.615850e-47 |
Msa0318230 | Msa0665790 | 0.805306 | 1.422364e-49 | -8.615850e-47 |
Msa0318230 | Msa0682730 | -0.801576 | 8.437197e-49 | -8.615850e-47 |
Msa0318230 | Msa0714600 | 0.836484 | 9.109986e-57 | -8.615850e-47 |
Msa0318230 | Msa0731710 | 0.802745 | 4.849384e-49 | -8.615850e-47 |
Msa0318230 | Msa0755090 | 0.801308 | 9.575448e-49 | -8.615850e-47 |
Msa0318230 | Msa0828570 | 0.848884 | 4.610012e-60 | -8.615850e-47 |
Msa0318230 | Msa0834460 | 0.800972 | 1.121364e-48 | -8.615850e-47 |
Msa0318230 | Msa0863770 | 0.804526 | 2.070624e-49 | -8.615850e-47 |
Msa0318230 | Msa0887070 | 0.804862 | 1.762008e-49 | -8.615850e-47 |
Msa0318230 | Msa0964680 | 0.811745 | 6.003230e-51 | -8.615850e-47 |
Msa0318230 | Msa1004210 | 0.804709 | 1.896253e-49 | -8.615850e-47 |
Msa0318230 | Msa1046610 | 0.808458 | 3.067221e-50 | -8.615850e-47 |
Msa0318230 | Msa1072350 | 0.801639 | 8.189101e-49 | -8.615850e-47 |
Msa0318230 | Msa1162980 | 0.834664 | 2.630319e-56 | -8.615850e-47 |
Msa0318230 | Msa1182830 | 0.808792 | 2.602389e-50 | -8.615850e-47 |
Msa0318230 | Msa1237260 | 0.810537 | 1.097504e-50 | -8.615850e-47 |
Msa0318230 | Msa1278420 | 0.801829 | 7.487107e-49 | -8.615850e-47 |
Msa0318230 | Msa1317710 | 0.816204 | 6.239116e-52 | -8.615850e-47 |
Msa0318230 | Msa1335970 | -0.807291 | 5.429658e-50 | -8.615850e-47 |
Msa0318230 | Msa1368980 | 0.802202 | 6.274683e-49 | -8.615850e-47 |
Msa0318230 | Msa1421870 | 0.804764 | 1.847329e-49 | -8.615850e-47 |
Msa0318230 | Msa1427830 | 0.825533 | 4.451348e-54 | -8.615850e-47 |
Msa0318230 | Msa1454110 | 0.825836 | 3.772054e-54 | -8.615850e-47 |
Msa0318230 | Msa1460310 | -0.818600 | 1.800774e-52 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0318230 | MtrunA17_Chr7g0259221 | 89.865 | 296 | 7 | 2 | 29 | 303 | 184 | 477 | 0.0 | 515 |
Msa0318230 | MtrunA17_Chr7g0259471 | 85.473 | 296 | 20 | 2 | 29 | 303 | 182 | 475 | 1.27e-175 | 494 |
Msa0318230 | MtrunA17_Chr4g0066581 | 54.882 | 297 | 110 | 3 | 29 | 303 | 194 | 488 | 1.42e-107 | 321 |
Msa0318230 | MtrunA17_Chr2g0286721 | 53.872 | 297 | 113 | 3 | 29 | 303 | 191 | 485 | 1.29e-101 | 306 |
Msa0318230 | MtrunA17_Chr7g0273281 | 47.249 | 309 | 137 | 3 | 19 | 303 | 191 | 497 | 1.96e-94 | 288 |
Msa0318230 | MtrunA17_Chr1g0155221 | 44.108 | 297 | 137 | 3 | 29 | 298 | 191 | 485 | 1.30e-77 | 244 |
Msa0318230 | MtrunA17_Chr8g0373181 | 41.801 | 311 | 150 | 5 | 17 | 298 | 174 | 482 | 1.75e-73 | 233 |
Msa0318230 | MtrunA17_Chr8g0373191 | 40.615 | 325 | 159 | 6 | 7 | 300 | 135 | 456 | 9.28e-69 | 221 |
Msa0318230 | MtrunA17_Chr7g0273261 | 45.614 | 228 | 99 | 3 | 96 | 302 | 15 | 238 | 4.50e-66 | 207 |
Msa0318230 | MtrunA17_Chr7g0221631 | 90.123 | 81 | 6 | 1 | 188 | 268 | 39 | 117 | 3.04e-45 | 149 |
Msa0318230 | MtrunA17_Chr1g0213631 | 31.293 | 294 | 163 | 10 | 37 | 298 | 143 | 429 | 3.48e-34 | 129 |
Msa0318230 | MtrunA17_Chr4g0021771 | 30.796 | 289 | 174 | 6 | 36 | 298 | 211 | 499 | 1.82e-32 | 125 |
Msa0318230 | MtrunA17_Chr4g0032021 | 31.613 | 310 | 174 | 11 | 27 | 301 | 248 | 554 | 2.33e-32 | 125 |
Msa0318230 | MtrunA17_Chr6g0457781 | 29.688 | 320 | 183 | 9 | 17 | 303 | 234 | 544 | 2.75e-32 | 125 |
Msa0318230 | MtrunA17_Chr1g0213611 | 29.492 | 295 | 170 | 7 | 37 | 298 | 236 | 525 | 3.92e-32 | 125 |
Msa0318230 | MtrunA17_Chr5g0404181 | 51.020 | 98 | 48 | 0 | 201 | 298 | 31 | 128 | 1.99e-31 | 114 |
Msa0318230 | MtrunA17_Chr7g0250881 | 28.840 | 319 | 185 | 9 | 17 | 302 | 194 | 503 | 5.94e-31 | 121 |
Msa0318230 | MtrunA17_Chr7g0214451 | 30.717 | 293 | 165 | 9 | 37 | 298 | 191 | 476 | 1.66e-29 | 117 |
Msa0318230 | MtrunA17_Chr4g0034681 | 28.387 | 310 | 172 | 7 | 36 | 300 | 186 | 490 | 5.85e-29 | 115 |
Msa0318230 | MtrunA17_Chr3g0144361 | 28.617 | 311 | 170 | 7 | 36 | 299 | 184 | 489 | 3.80e-28 | 113 |
Msa0318230 | MtrunA17_Chr7g0259451 | 92.000 | 50 | 4 | 0 | 217 | 266 | 1 | 50 | 1.33e-27 | 101 |
Msa0318230 | MtrunA17_Chr2g0282031 | 30.272 | 294 | 169 | 7 | 36 | 298 | 209 | 497 | 7.84e-27 | 109 |
Msa0318230 | MtrunA17_Chr3g0121674 | 29.553 | 291 | 161 | 10 | 41 | 297 | 2 | 282 | 1.93e-26 | 105 |
Msa0318230 | MtrunA17_Chr3g0115731 | 28.840 | 319 | 184 | 8 | 12 | 297 | 154 | 462 | 1.60e-25 | 105 |
Msa0318230 | MtrunA17_Chr4g0039651 | 28.065 | 310 | 178 | 11 | 27 | 299 | 197 | 498 | 1.87e-25 | 105 |
Msa0318230 | MtrunA17_Chr3g0115721 | 28.904 | 301 | 182 | 6 | 26 | 297 | 186 | 483 | 1.30e-24 | 103 |
Msa0318230 | MtrunA17_Chr3g0115751 | 27.723 | 303 | 183 | 6 | 26 | 297 | 191 | 488 | 6.09e-24 | 101 |
Msa0318230 | MtrunA17_Chr3g0115781 | 26.207 | 290 | 182 | 5 | 38 | 298 | 200 | 486 | 6.43e-24 | 101 |
Msa0318230 | MtrunA17_Chr4g0036021 | 28.803 | 309 | 167 | 10 | 38 | 300 | 185 | 486 | 6.66e-24 | 101 |
Msa0318230 | MtrunA17_Chr3g0115741 | 27.835 | 291 | 174 | 6 | 38 | 297 | 201 | 486 | 1.17e-23 | 100 |
Msa0318230 | MtrunA17_Chr6g0486021 | 25.697 | 323 | 184 | 9 | 17 | 301 | 182 | 486 | 2.78e-23 | 99.4 |
Msa0318230 | MtrunA17_Chr3g0115711 | 26.962 | 293 | 173 | 7 | 38 | 297 | 198 | 482 | 3.67e-22 | 96.3 |
Msa0318230 | MtrunA17_Chr5g0432581 | 28.438 | 320 | 178 | 10 | 27 | 298 | 163 | 479 | 4.21e-22 | 96.3 |
Msa0318230 | MtrunA17_Chr5g0404191 | 45.055 | 91 | 50 | 0 | 29 | 119 | 192 | 282 | 1.43e-21 | 92.4 |
Msa0318230 | MtrunA17_Chr4g0004821 | 27.972 | 286 | 181 | 7 | 38 | 303 | 194 | 474 | 5.99e-21 | 92.8 |
Msa0318230 | MtrunA17_Chr8g0373531 | 28.750 | 320 | 177 | 10 | 27 | 298 | 163 | 479 | 9.86e-21 | 92.0 |
Msa0318230 | MtrunA17_Chr8g0390141 | 27.083 | 288 | 177 | 7 | 38 | 297 | 203 | 485 | 2.11e-20 | 91.3 |
Msa0318230 | MtrunA17_Chr4g0065324 | 28.125 | 288 | 173 | 8 | 38 | 297 | 205 | 486 | 1.42e-19 | 88.6 |
Msa0318230 | MtrunA17_Chr3g0078971 | 23.611 | 288 | 189 | 6 | 38 | 298 | 201 | 484 | 2.85e-19 | 87.8 |
Msa0318230 | MtrunA17_Chr8g0390521 | 26.623 | 308 | 168 | 8 | 36 | 298 | 174 | 468 | 3.32e-19 | 87.8 |
Msa0318230 | MtrunA17_Chr3g0078791 | 26.022 | 269 | 186 | 6 | 38 | 297 | 146 | 410 | 1.02e-17 | 83.2 |
Msa0318230 | MtrunA17_Chr4g0065351 | 27.083 | 288 | 176 | 7 | 38 | 297 | 40 | 321 | 1.75e-17 | 81.6 |
Msa0318230 | MtrunA17_Chr4g0065311 | 25.862 | 290 | 177 | 8 | 38 | 297 | 197 | 478 | 1.95e-17 | 82.4 |
Msa0318230 | MtrunA17_Chr3g0119401 | 26.263 | 297 | 175 | 10 | 38 | 303 | 251 | 534 | 2.73e-17 | 82.0 |
Msa0318230 | MtrunA17_Chr6g0485661 | 26.578 | 301 | 184 | 7 | 26 | 293 | 206 | 502 | 3.69e-17 | 81.6 |
Msa0318230 | MtrunA17_Chr3g0078991 | 24.828 | 290 | 184 | 7 | 38 | 298 | 201 | 485 | 4.17e-17 | 81.6 |
Msa0318230 | MtrunA17_Chr7g0257631 | 26.224 | 286 | 181 | 7 | 38 | 297 | 237 | 518 | 9.26e-17 | 80.5 |
Msa0318230 | MtrunA17_Chr1g0205691 | 24.399 | 291 | 189 | 7 | 38 | 301 | 201 | 487 | 2.43e-16 | 79.3 |
Msa0318230 | MtrunA17_Chr8g0390261 | 25.694 | 288 | 181 | 7 | 38 | 297 | 203 | 485 | 2.50e-16 | 79.3 |
Msa0318230 | MtrunA17_Chr5g0394341 | 22.680 | 291 | 194 | 7 | 38 | 301 | 201 | 487 | 3.32e-16 | 79.0 |
Msa0318230 | MtrunA17_Chr3g0085971 | 26.117 | 291 | 180 | 8 | 38 | 298 | 200 | 485 | 3.36e-16 | 79.0 |
Msa0318230 | MtrunA17_Chr5g0445601 | 24.825 | 286 | 185 | 7 | 38 | 297 | 203 | 484 | 5.65e-16 | 78.2 |
Msa0318230 | MtrunA17_Chr1g0164851 | 26.460 | 291 | 178 | 9 | 38 | 298 | 200 | 484 | 3.41e-15 | 75.9 |
Msa0318230 | MtrunA17_Chr5g0419321 | 28.235 | 255 | 136 | 8 | 84 | 295 | 479 | 729 | 4.02e-15 | 75.9 |
Msa0318230 | MtrunA17_Chr1g0205671 | 23.051 | 295 | 188 | 7 | 38 | 301 | 201 | 487 | 4.87e-15 | 75.1 |
Msa0318230 | MtrunA17_Chr5g0437021 | 27.304 | 293 | 173 | 11 | 38 | 298 | 200 | 484 | 5.33e-15 | 75.1 |
Msa0318230 | MtrunA17_Chr3g0128081 | 26.207 | 290 | 179 | 7 | 38 | 297 | 201 | 485 | 8.25e-15 | 74.7 |
Msa0318230 | MtrunA17_Chr1g0164871 | 26.117 | 291 | 179 | 9 | 38 | 298 | 200 | 484 | 8.64e-15 | 74.7 |
Msa0318230 | MtrunA17_Chr6g0486681 | 23.611 | 288 | 187 | 6 | 38 | 297 | 203 | 485 | 9.54e-15 | 74.3 |
Msa0318230 | MtrunA17_Chr6g0486671 | 23.611 | 288 | 187 | 6 | 38 | 297 | 203 | 485 | 9.54e-15 | 74.3 |
Msa0318230 | MtrunA17_Chr5g0403831 | 22.684 | 313 | 187 | 8 | 36 | 299 | 187 | 493 | 9.74e-15 | 74.3 |
Msa0318230 | MtrunA17_Chr5g0434261 | 25.497 | 302 | 163 | 9 | 47 | 291 | 7 | 303 | 1.85e-14 | 72.8 |
Msa0318230 | MtrunA17_Chr2g0303731 | 40.000 | 100 | 57 | 2 | 201 | 298 | 452 | 550 | 1.88e-14 | 73.6 |
Msa0318230 | MtrunA17_Chr2g0303731 | 27.536 | 138 | 90 | 4 | 37 | 168 | 184 | 317 | 2.59e-11 | 64.3 |
Msa0318230 | MtrunA17_Chr5g0407441 | 28.326 | 233 | 128 | 7 | 98 | 295 | 475 | 703 | 2.10e-14 | 73.6 |
Msa0318230 | MtrunA17_Chr8g0376631 | 37.864 | 103 | 55 | 2 | 201 | 298 | 451 | 549 | 2.11e-14 | 73.6 |
Msa0318230 | MtrunA17_Chr8g0376631 | 27.778 | 144 | 97 | 3 | 37 | 177 | 184 | 323 | 1.25e-12 | 68.2 |
Msa0318230 | MtrunA17_Chr4g0048411 | 25.839 | 298 | 172 | 10 | 38 | 298 | 201 | 486 | 3.03e-14 | 72.8 |
Msa0318230 | MtrunA17_Chr1g0205681 | 23.051 | 295 | 188 | 7 | 38 | 301 | 202 | 488 | 6.54e-14 | 72.0 |
Msa0318230 | MtrunA17_Chr8g0376601 | 30.556 | 144 | 93 | 3 | 37 | 177 | 184 | 323 | 8.97e-14 | 71.6 |
Msa0318230 | MtrunA17_Chr8g0376601 | 39.130 | 92 | 55 | 1 | 201 | 291 | 450 | 541 | 2.58e-13 | 70.1 |
Msa0318230 | MtrunA17_Chr8g0376611 | 29.630 | 135 | 91 | 2 | 37 | 168 | 117 | 250 | 1.96e-13 | 70.5 |
Msa0318230 | MtrunA17_Chr8g0376611 | 35.514 | 107 | 60 | 2 | 201 | 302 | 382 | 484 | 2.47e-13 | 70.1 |
Msa0318230 | MtrunA17_Chr5g0417611 | 25.000 | 296 | 175 | 8 | 38 | 297 | 202 | 486 | 2.25e-13 | 70.5 |
Msa0318230 | MtrunA17_Chr2g0290181 | 35.354 | 99 | 63 | 1 | 201 | 298 | 455 | 553 | 2.55e-13 | 70.1 |
Msa0318230 | MtrunA17_Chr4g0048051 | 24.399 | 291 | 187 | 7 | 36 | 297 | 199 | 485 | 4.95e-13 | 69.3 |
Msa0318230 | MtrunA17_Chr3g0146061 | 27.556 | 225 | 128 | 6 | 104 | 295 | 499 | 721 | 5.25e-13 | 69.3 |
Msa0318230 | MtrunA17_Chr5g0434251 | 34.579 | 107 | 61 | 2 | 201 | 302 | 38 | 140 | 6.83e-13 | 65.5 |
Msa0318230 | MtrunA17_Chr3g0144261 | 27.500 | 200 | 113 | 4 | 128 | 295 | 512 | 711 | 8.78e-13 | 68.6 |
Msa0318230 | MtrunA17_Chr8g0370151 | 30.622 | 209 | 107 | 7 | 121 | 295 | 138 | 342 | 1.24e-12 | 67.8 |
Msa0318230 | MtrunA17_Chr2g0303701 | 28.966 | 145 | 91 | 4 | 37 | 177 | 184 | 320 | 8.90e-12 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0318230 | AT2G48020.2 | 65.472 | 307 | 83 | 2 | 17 | 302 | 158 | 462 | 1.47e-138 | 400 |
Msa0318230 | AT2G48020.1 | 65.472 | 307 | 83 | 2 | 17 | 302 | 158 | 462 | 1.47e-138 | 400 |
Msa0318230 | AT1G54730.5 | 48.333 | 300 | 149 | 3 | 7 | 302 | 148 | 445 | 8.70e-99 | 298 |
Msa0318230 | AT3G05150.1 | 48.589 | 319 | 136 | 4 | 7 | 299 | 151 | 467 | 5.54e-97 | 294 |
Msa0318230 | AT3G05150.3 | 48.589 | 319 | 136 | 4 | 7 | 299 | 151 | 467 | 5.54e-97 | 294 |
Msa0318230 | AT3G05150.2 | 48.287 | 321 | 138 | 4 | 7 | 301 | 151 | 469 | 8.40e-97 | 294 |
Msa0318230 | AT5G18840.1 | 53.041 | 296 | 115 | 3 | 29 | 302 | 186 | 479 | 1.14e-96 | 293 |
Msa0318230 | AT1G54730.2 | 45.171 | 321 | 149 | 4 | 7 | 302 | 148 | 466 | 7.95e-94 | 286 |
Msa0318230 | AT1G54730.4 | 49.621 | 264 | 127 | 3 | 7 | 266 | 148 | 409 | 2.02e-86 | 265 |
Msa0318230 | AT3G05160.3 | 43.729 | 295 | 143 | 2 | 30 | 303 | 115 | 407 | 2.31e-83 | 257 |
Msa0318230 | AT3G05160.2 | 43.729 | 295 | 143 | 2 | 30 | 303 | 115 | 407 | 2.31e-83 | 257 |
Msa0318230 | AT3G05160.1 | 43.729 | 295 | 143 | 2 | 30 | 303 | 164 | 456 | 5.92e-83 | 258 |
Msa0318230 | AT1G54730.3 | 45.965 | 285 | 127 | 4 | 7 | 266 | 148 | 430 | 1.84e-81 | 253 |
Msa0318230 | AT3G05165.3 | 43.051 | 295 | 145 | 2 | 30 | 303 | 173 | 465 | 2.55e-81 | 253 |
Msa0318230 | AT3G05165.2 | 43.051 | 295 | 145 | 2 | 30 | 303 | 173 | 465 | 2.55e-81 | 253 |
Msa0318230 | AT3G05165.1 | 43.051 | 295 | 145 | 2 | 30 | 303 | 173 | 465 | 2.55e-81 | 253 |
Msa0318230 | AT3G05155.1 | 43.098 | 297 | 142 | 4 | 28 | 302 | 168 | 459 | 9.82e-79 | 247 |
Msa0318230 | AT4G04750.1 | 43.289 | 298 | 143 | 4 | 27 | 300 | 175 | 470 | 3.45e-78 | 246 |
Msa0318230 | AT4G04750.2 | 43.289 | 298 | 143 | 4 | 27 | 300 | 175 | 470 | 3.45e-78 | 246 |
Msa0318230 | AT1G08930.1 | 42.667 | 300 | 148 | 4 | 25 | 302 | 195 | 492 | 5.62e-78 | 246 |
Msa0318230 | AT1G08930.2 | 42.667 | 300 | 148 | 4 | 25 | 302 | 195 | 492 | 5.62e-78 | 246 |
Msa0318230 | AT4G04750.3 | 43.289 | 298 | 143 | 4 | 27 | 300 | 219 | 514 | 8.40e-78 | 246 |
Msa0318230 | AT4G04760.3 | 43.537 | 294 | 140 | 3 | 30 | 299 | 115 | 406 | 1.18e-76 | 240 |
Msa0318230 | AT2G48020.4 | 59.624 | 213 | 63 | 2 | 17 | 208 | 158 | 368 | 2.14e-76 | 238 |
Msa0318230 | AT4G04760.1 | 43.537 | 294 | 140 | 3 | 30 | 299 | 174 | 465 | 5.10e-76 | 240 |
Msa0318230 | AT1G08920.1 | 41.000 | 300 | 153 | 3 | 25 | 302 | 169 | 466 | 6.74e-76 | 239 |
Msa0318230 | AT1G08920.2 | 40.717 | 307 | 151 | 3 | 25 | 302 | 169 | 473 | 1.33e-75 | 239 |
Msa0318230 | AT1G19450.1 | 43.849 | 317 | 137 | 6 | 17 | 299 | 176 | 485 | 1.21e-74 | 237 |
Msa0318230 | AT1G75220.1 | 43.269 | 312 | 146 | 4 | 17 | 299 | 175 | 484 | 1.27e-74 | 237 |
Msa0318230 | AT5G27350.1 | 42.414 | 290 | 144 | 2 | 33 | 301 | 177 | 464 | 3.03e-72 | 230 |
Msa0318230 | AT3G20460.1 | 41.042 | 307 | 158 | 3 | 17 | 302 | 183 | 487 | 4.56e-72 | 230 |
Msa0318230 | AT3G05400.2 | 43.151 | 292 | 139 | 5 | 30 | 298 | 149 | 436 | 2.70e-71 | 227 |
Msa0318230 | AT3G05400.1 | 43.151 | 292 | 139 | 5 | 30 | 298 | 169 | 456 | 3.48e-71 | 227 |
Msa0318230 | AT5G27360.2 | 41.379 | 290 | 147 | 2 | 33 | 301 | 77 | 364 | 4.21e-71 | 224 |
Msa0318230 | AT5G27360.5 | 41.379 | 290 | 147 | 2 | 33 | 301 | 77 | 364 | 4.21e-71 | 224 |
Msa0318230 | AT5G27360.1 | 41.379 | 290 | 147 | 2 | 33 | 301 | 181 | 468 | 2.10e-70 | 226 |
Msa0318230 | AT5G27360.3 | 41.379 | 290 | 147 | 2 | 33 | 301 | 229 | 516 | 4.16e-70 | 226 |
Msa0318230 | AT4G04760.2 | 42.808 | 292 | 142 | 6 | 30 | 299 | 174 | 462 | 4.77e-69 | 222 |
Msa0318230 | AT3G05165.6 | 41.825 | 263 | 130 | 2 | 30 | 271 | 173 | 433 | 8.44e-67 | 217 |
Msa0318230 | AT1G54730.8 | 46.957 | 230 | 116 | 3 | 7 | 232 | 148 | 375 | 6.33e-66 | 212 |
Msa0318230 | AT1G08920.3 | 40.530 | 264 | 133 | 3 | 25 | 266 | 169 | 430 | 3.03e-63 | 206 |
Msa0318230 | AT1G08890.1 | 36.860 | 293 | 162 | 2 | 30 | 301 | 170 | 460 | 4.04e-63 | 206 |
Msa0318230 | AT2G48020.3 | 66.234 | 154 | 50 | 1 | 17 | 170 | 158 | 309 | 9.91e-63 | 202 |
Msa0318230 | AT1G08900.5 | 35.390 | 308 | 176 | 2 | 15 | 301 | 111 | 416 | 2.76e-62 | 203 |
Msa0318230 | AT1G08900.3 | 35.390 | 308 | 176 | 2 | 15 | 301 | 145 | 450 | 4.17e-62 | 203 |
Msa0318230 | AT1G08900.1 | 35.390 | 308 | 176 | 2 | 15 | 301 | 153 | 458 | 5.35e-62 | 203 |
Msa0318230 | AT1G08900.2 | 35.390 | 308 | 176 | 2 | 15 | 301 | 153 | 458 | 5.35e-62 | 203 |
Msa0318230 | AT1G54730.9 | 43.028 | 251 | 116 | 4 | 7 | 232 | 148 | 396 | 9.01e-61 | 199 |
Msa0318230 | AT1G54730.7 | 43.028 | 251 | 116 | 4 | 7 | 232 | 148 | 396 | 9.01e-61 | 199 |
Msa0318230 | AT3G05165.4 | 40.562 | 249 | 125 | 2 | 30 | 257 | 173 | 419 | 1.80e-58 | 194 |
Msa0318230 | AT3G05165.5 | 40.562 | 249 | 125 | 2 | 30 | 257 | 173 | 419 | 1.80e-58 | 194 |
Msa0318230 | AT1G08900.4 | 35.165 | 273 | 154 | 2 | 15 | 266 | 153 | 423 | 1.43e-49 | 170 |
Msa0318230 | AT1G54730.10 | 48.521 | 169 | 81 | 3 | 7 | 171 | 148 | 314 | 2.78e-46 | 159 |
Msa0318230 | AT1G54730.6 | 48.521 | 169 | 81 | 3 | 7 | 171 | 148 | 314 | 2.78e-46 | 159 |
Msa0318230 | AT1G54730.11 | 49.677 | 155 | 73 | 2 | 19 | 170 | 161 | 313 | 2.86e-45 | 157 |
Msa0318230 | AT3G05155.2 | 46.853 | 143 | 71 | 2 | 28 | 170 | 168 | 305 | 3.05e-37 | 135 |
Msa0318230 | AT5G27360.4 | 36.019 | 211 | 112 | 2 | 33 | 222 | 181 | 389 | 6.34e-36 | 134 |
Msa0318230 | AT2G43330.1 | 30.968 | 310 | 171 | 11 | 23 | 298 | 176 | 476 | 2.57e-35 | 133 |
Msa0318230 | AT5G16150.2 | 28.750 | 320 | 186 | 9 | 17 | 303 | 234 | 544 | 4.74e-31 | 122 |
Msa0318230 | AT5G16150.1 | 28.750 | 320 | 186 | 9 | 17 | 303 | 234 | 544 | 4.74e-31 | 122 |
Msa0318230 | AT5G16150.3 | 28.750 | 320 | 186 | 9 | 17 | 303 | 234 | 544 | 4.74e-31 | 122 |
Msa0318230 | AT5G59250.1 | 30.868 | 311 | 177 | 11 | 26 | 301 | 249 | 556 | 1.89e-30 | 120 |
Msa0318230 | AT2G20780.1 | 29.153 | 295 | 169 | 7 | 36 | 298 | 211 | 497 | 6.22e-28 | 113 |
Msa0318230 | AT2G20780.2 | 29.153 | 295 | 169 | 7 | 36 | 298 | 153 | 439 | 1.05e-27 | 112 |
Msa0318230 | AT5G17010.1 | 30.420 | 286 | 163 | 8 | 47 | 299 | 218 | 500 | 1.17e-27 | 112 |
Msa0318230 | AT5G17010.3 | 30.420 | 286 | 163 | 8 | 47 | 299 | 218 | 500 | 1.17e-27 | 112 |
Msa0318230 | AT5G17010.4 | 30.420 | 286 | 163 | 8 | 47 | 299 | 218 | 500 | 1.17e-27 | 112 |
Msa0318230 | AT3G03090.1 | 29.333 | 300 | 174 | 9 | 34 | 299 | 205 | 500 | 7.12e-26 | 107 |
Msa0318230 | AT1G67300.2 | 28.213 | 319 | 182 | 9 | 20 | 303 | 186 | 492 | 2.28e-25 | 105 |
Msa0318230 | AT1G67300.1 | 28.302 | 318 | 182 | 9 | 20 | 303 | 186 | 491 | 2.29e-25 | 105 |
Msa0318230 | AT1G67300.3 | 28.302 | 318 | 182 | 9 | 20 | 303 | 186 | 491 | 2.29e-25 | 105 |
Msa0318230 | AT2G16130.1 | 27.419 | 310 | 175 | 10 | 36 | 299 | 182 | 487 | 1.21e-23 | 100 |
Msa0318230 | AT2G16120.1 | 27.184 | 309 | 175 | 10 | 36 | 298 | 182 | 486 | 2.45e-23 | 100 |
Msa0318230 | AT1G67300.6 | 30.159 | 252 | 147 | 6 | 20 | 246 | 186 | 433 | 1.70e-22 | 97.4 |
Msa0318230 | AT1G67300.7 | 30.159 | 252 | 147 | 6 | 20 | 246 | 186 | 433 | 1.70e-22 | 97.4 |
Msa0318230 | AT1G05030.2 | 27.083 | 288 | 183 | 7 | 38 | 303 | 185 | 467 | 3.01e-22 | 96.7 |
Msa0318230 | AT1G05030.1 | 27.083 | 288 | 183 | 7 | 38 | 303 | 237 | 519 | 4.17e-22 | 96.7 |
Msa0318230 | AT1G79820.2 | 28.421 | 285 | 177 | 6 | 38 | 301 | 212 | 490 | 4.32e-22 | 96.3 |
Msa0318230 | AT1G79820.1 | 28.421 | 285 | 177 | 6 | 38 | 301 | 212 | 490 | 4.32e-22 | 96.3 |
Msa0318230 | AT4G36670.1 | 27.124 | 306 | 180 | 8 | 36 | 299 | 173 | 477 | 7.90e-22 | 95.5 |
Msa0318230 | AT1G67300.4 | 30.453 | 243 | 140 | 6 | 20 | 237 | 186 | 424 | 2.51e-21 | 94.0 |
Msa0318230 | AT1G67300.5 | 30.453 | 243 | 140 | 6 | 20 | 237 | 186 | 424 | 2.51e-21 | 94.0 |
Msa0318230 | AT3G18830.1 | 24.918 | 305 | 186 | 8 | 36 | 298 | 192 | 495 | 1.12e-20 | 92.4 |
Msa0318230 | AT1G50310.2 | 25.000 | 288 | 185 | 7 | 38 | 297 | 59 | 343 | 2.71e-20 | 90.5 |
Msa0318230 | AT5G26340.1 | 25.086 | 291 | 187 | 6 | 38 | 301 | 202 | 488 | 4.73e-20 | 90.5 |
Msa0318230 | AT1G50310.1 | 25.000 | 288 | 185 | 7 | 38 | 297 | 202 | 486 | 9.05e-20 | 89.7 |
Msa0318230 | AT2G18480.1 | 25.081 | 307 | 182 | 6 | 36 | 298 | 178 | 480 | 4.24e-19 | 87.8 |
Msa0318230 | AT3G19940.1 | 24.567 | 289 | 184 | 7 | 38 | 297 | 202 | 485 | 5.64e-19 | 87.4 |
Msa0318230 | AT1G34580.2 | 28.522 | 291 | 175 | 8 | 38 | 297 | 149 | 437 | 1.02e-18 | 86.3 |
Msa0318230 | AT1G34580.1 | 28.522 | 291 | 175 | 8 | 38 | 297 | 199 | 487 | 1.16e-18 | 86.7 |
Msa0318230 | AT1G11260.1 | 26.190 | 294 | 174 | 7 | 38 | 297 | 201 | 485 | 2.23e-18 | 85.5 |
Msa0318230 | AT1G79820.4 | 29.515 | 227 | 138 | 4 | 38 | 246 | 212 | 434 | 2.25e-18 | 85.5 |
Msa0318230 | AT5G23270.1 | 25.685 | 292 | 181 | 7 | 36 | 297 | 201 | 486 | 1.07e-17 | 83.6 |
Msa0318230 | AT4G21480.1 | 26.871 | 294 | 174 | 8 | 38 | 298 | 199 | 484 | 1.03e-16 | 80.9 |
Msa0318230 | AT4G02050.2 | 24.126 | 286 | 187 | 6 | 38 | 297 | 203 | 484 | 1.60e-16 | 80.1 |
Msa0318230 | AT4G02050.1 | 24.126 | 286 | 187 | 6 | 38 | 297 | 203 | 484 | 1.60e-16 | 80.1 |
Msa0318230 | AT1G07340.1 | 26.552 | 290 | 177 | 6 | 38 | 297 | 198 | 481 | 3.84e-16 | 79.0 |
Msa0318230 | AT3G19930.1 | 24.917 | 301 | 174 | 8 | 36 | 298 | 198 | 484 | 5.07e-16 | 78.6 |
Msa0318230 | AT3G19930.2 | 24.917 | 301 | 174 | 8 | 36 | 298 | 198 | 484 | 5.07e-16 | 78.6 |
Msa0318230 | AT2G35740.1 | 41.414 | 99 | 57 | 1 | 201 | 298 | 458 | 556 | 1.25e-15 | 77.4 |
Msa0318230 | AT4G16480.2 | 37.374 | 99 | 61 | 1 | 201 | 298 | 459 | 557 | 8.44e-15 | 75.1 |
Msa0318230 | AT4G16480.3 | 37.374 | 99 | 61 | 1 | 201 | 298 | 459 | 557 | 8.44e-15 | 75.1 |
Msa0318230 | AT4G16480.1 | 37.374 | 99 | 61 | 1 | 201 | 298 | 459 | 557 | 8.44e-15 | 75.1 |
Msa0318230 | AT1G30220.1 | 36.449 | 107 | 59 | 2 | 201 | 302 | 455 | 557 | 9.59e-15 | 75.1 |
Msa0318230 | AT1G30220.1 | 31.618 | 136 | 87 | 4 | 37 | 168 | 186 | 319 | 4.91e-14 | 72.8 |
Msa0318230 | AT1G20840.2 | 30.435 | 207 | 110 | 5 | 121 | 295 | 509 | 713 | 1.57e-14 | 74.3 |
Msa0318230 | AT1G20840.1 | 30.435 | 207 | 110 | 5 | 121 | 295 | 509 | 713 | 1.57e-14 | 74.3 |
Msa0318230 | AT3G51490.1 | 28.745 | 247 | 137 | 8 | 75 | 295 | 473 | 706 | 2.33e-14 | 73.9 |
Msa0318230 | AT3G51490.3 | 27.668 | 253 | 140 | 7 | 75 | 295 | 423 | 664 | 9.66e-14 | 72.0 |
Msa0318230 | AT3G51490.2 | 27.273 | 253 | 141 | 6 | 75 | 295 | 473 | 714 | 1.29e-13 | 71.6 |
Msa0318230 | AT3G05960.1 | 26.689 | 296 | 175 | 10 | 38 | 301 | 197 | 482 | 1.44e-13 | 71.2 |
Msa0318230 | AT5G26250.1 | 26.102 | 295 | 178 | 10 | 38 | 301 | 198 | 483 | 2.25e-13 | 70.9 |
Msa0318230 | AT4G35300.9 | 28.440 | 218 | 116 | 7 | 113 | 295 | 498 | 710 | 1.43e-11 | 65.5 |
Msa0318230 | AT4G35300.2 | 28.440 | 218 | 116 | 7 | 113 | 295 | 498 | 710 | 1.43e-11 | 65.5 |
Msa0318230 | AT4G35300.3 | 28.440 | 218 | 116 | 7 | 113 | 295 | 498 | 710 | 1.43e-11 | 65.5 |
Msa0318230 | AT4G35300.4 | 28.440 | 218 | 116 | 7 | 113 | 295 | 508 | 720 | 1.82e-11 | 65.1 |
Msa0318230 | AT4G35300.8 | 28.440 | 218 | 116 | 7 | 113 | 295 | 508 | 720 | 1.82e-11 | 65.1 |
Msa0318230 | AT4G35300.6 | 28.440 | 218 | 116 | 7 | 113 | 295 | 508 | 720 | 1.82e-11 | 65.1 |
Msa0318230 | AT4G35300.11 | 28.440 | 218 | 116 | 7 | 113 | 295 | 508 | 720 | 1.82e-11 | 65.1 |
Msa0318230 | AT4G35300.1 | 28.440 | 218 | 116 | 7 | 113 | 295 | 508 | 720 | 1.82e-11 | 65.1 |
Msa0318230 | AT4G35300.10 | 28.440 | 218 | 116 | 7 | 113 | 295 | 508 | 720 | 1.82e-11 | 65.1 |
Msa0318230 | AT4G35300.7 | 28.440 | 218 | 116 | 7 | 113 | 295 | 508 | 720 | 1.82e-11 | 65.1 |
Find 88 sgRNAs with CRISPR-Local
Find 223 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCCACTGCTGTGTTGCTTC+TGG | 0.130660 | 2_4:-16764857 | Msa0318230:CDS |
GCAAACTTCCTACGCGTTAA+TGG | 0.190131 | 2_4:+16762653 | None:intergenic |
CTTGGTTTCAATTAGGTATC+TGG | 0.196736 | 2_4:-16763681 | Msa0318230:intron |
CTTATGGTTTGCCAGCAATT+AGG | 0.210158 | 2_4:-16764193 | Msa0318230:CDS |
GATATTTCCAGTCAATATTA+AGG | 0.214954 | 2_4:-16763016 | Msa0318230:CDS |
TTATGGTTTGCCAGCAATTA+GGG | 0.246534 | 2_4:-16764192 | Msa0318230:CDS |
AGGGCACCTCGGAGTTCTTT+TGG | 0.268637 | 2_4:+16765252 | None:intergenic |
GTGTAGTGTTTGGTGGAAAT+TGG | 0.274589 | 2_4:-16762625 | Msa0318230:three_prime_UTR |
CCCACTGCTGTGTTGCTTCT+GGG | 0.289747 | 2_4:-16764856 | Msa0318230:CDS |
GCAACACAGCAGTGGGAATA+AGG | 0.301338 | 2_4:+16764863 | None:intergenic |
TAAAAGCCTTGAACAATTAC+AGG | 0.318980 | 2_4:-16762679 | Msa0318230:CDS |
TGTATCAGTGCATTCATAAT+TGG | 0.321197 | 2_4:-16765046 | Msa0318230:CDS |
GGGGATGCATTATACTATTA+AGG | 0.350240 | 2_4:+16762438 | None:intergenic |
TAATTGGAACAGTACTTTCA+TGG | 0.363139 | 2_4:-16765030 | Msa0318230:CDS |
AGTATCTGGAGTAGGGCTTA+TGG | 0.367600 | 2_4:-16764209 | Msa0318230:CDS |
GTCCCAGCACTTGCCGTAAC+CGG | 0.369576 | 2_4:-16763501 | Msa0318230:CDS |
TTCAATTAGGTATCTGGATC+AGG | 0.372298 | 2_4:-16763675 | Msa0318230:intron |
TGAAGAGGCAGAAGAAATTC+AGG | 0.379612 | 2_4:-16764626 | Msa0318230:intron |
TGGCTGCCTGTAATTGTTCA+AGG | 0.392084 | 2_4:+16762673 | None:intergenic |
ACTTGCCGTAACCGGCATAT+TGG | 0.393259 | 2_4:-16763493 | Msa0318230:intron |
TAACGTGGTTTCATAAAGAA+TGG | 0.394263 | 2_4:-16762360 | Msa0318230:three_prime_UTR |
TATAATATACGCTATCCTTC+AGG | 0.395137 | 2_4:-16763917 | Msa0318230:intron |
ATACCTGATTTAAGGTAGTC+AGG | 0.404425 | 2_4:+16765232 | None:intergenic |
CTCATGAGTTGGAGCTCCTA+TGG | 0.410624 | 2_4:-16762922 | Msa0318230:intron |
TCTTCATGAGTATCTGGAGT+AGG | 0.414187 | 2_4:-16764217 | Msa0318230:intron |
TTATTACTTACCAGCCATCT+AGG | 0.415487 | 2_4:+16764811 | None:intergenic |
TGGAGGGCTTTAGCTATAAT+CGG | 0.425528 | 2_4:-16765010 | Msa0318230:intron |
TGCCCTGACTACCTTAAATC+AGG | 0.427867 | 2_4:-16765235 | Msa0318230:intron |
CTTCATGAGTATCTGGAGTA+GGG | 0.431472 | 2_4:-16764216 | Msa0318230:intron |
ATGCCGGTTACGGCAAGTGC+TGG | 0.431492 | 2_4:+16763498 | None:intergenic |
TGAAACAAATCCAGCACCTT+CGG | 0.432421 | 2_4:+16764453 | None:intergenic |
TCATTCCAGAGTCTCCTAGA+TGG | 0.435503 | 2_4:-16764825 | Msa0318230:CDS |
CTTTCAACTTTCTCATGAGT+TGG | 0.435734 | 2_4:-16762933 | Msa0318230:CDS |
TCTGGATCAGGATTGGTTGC+AGG | 0.437259 | 2_4:-16763663 | Msa0318230:CDS |
GCATAGCAACATTAGTGAAC+TGG | 0.437404 | 2_4:-16762981 | Msa0318230:CDS |
ATATTTCCAGTCAATATTAA+GGG | 0.442648 | 2_4:-16763015 | Msa0318230:CDS |
GTCAATATTAAGGGGCAGGC+AGG | 0.454849 | 2_4:-16763006 | Msa0318230:CDS |
ACAAATTATAATCAAAATCA+TGG | 0.458705 | 2_4:+16762508 | None:intergenic |
TATGAAACCACGTTAAATCA+AGG | 0.459071 | 2_4:+16762368 | None:intergenic |
ATAGGATTTCCTTCTGCGAC+GGG | 0.459192 | 2_4:-16763943 | Msa0318230:intron |
GCAACATTAGTGAACTGGTT+TGG | 0.459624 | 2_4:-16762976 | Msa0318230:CDS |
CATGAGAAAGTTGAAAGTAT+AGG | 0.464787 | 2_4:+16762939 | None:intergenic |
CCATACCAATATGCCGGTTA+CGG | 0.465306 | 2_4:+16763488 | None:intergenic |
TTTGCGATTTGTGTAGTGTT+TGG | 0.466010 | 2_4:-16762635 | Msa0318230:three_prime_UTR |
TCCAGTCAATATTAAGGGGC+AGG | 0.473585 | 2_4:-16763010 | Msa0318230:CDS |
GCTCGCAAAACCGAAGGTGC+TGG | 0.477284 | 2_4:-16764463 | Msa0318230:CDS |
GCCTGCCCCTTAATATTGAC+TGG | 0.493013 | 2_4:+16763009 | None:intergenic |
GCGATTTGTGTAGTGTTTGG+TGG | 0.502161 | 2_4:-16762632 | Msa0318230:three_prime_UTR |
TTAGGTATCTGGATCAGGAT+TGG | 0.517795 | 2_4:-16763670 | Msa0318230:intron |
TCCAGAGTCTCCTAGATGGC+TGG | 0.523060 | 2_4:-16764821 | Msa0318230:intron |
TGCCGGTTACGGCAAGTGCT+GGG | 0.527544 | 2_4:+16763499 | None:intergenic |
TAGGAATGGGAGCAATTCCA+TGG | 0.529632 | 2_4:-16763346 | Msa0318230:CDS |
TGGAACAGTACTTTCATGGA+GGG | 0.532101 | 2_4:-16765026 | Msa0318230:CDS |
ACCAGCCATCTAGGAGACTC+TGG | 0.543206 | 2_4:+16764820 | None:intergenic |
CATAGGATTTCCTTCTGCGA+CGG | 0.543429 | 2_4:-16763944 | Msa0318230:intron |
TGCTGATATTAGGTCTACAT+AGG | 0.553729 | 2_4:-16763380 | Msa0318230:intron |
TAGTGAACTGGTTTGGTGCA+TGG | 0.558886 | 2_4:-16762969 | Msa0318230:CDS |
ACCTCGGACATCACAACCCA+TGG | 0.560460 | 2_4:+16763329 | None:intergenic |
TACCTGATTTAAGGTAGTCA+GGG | 0.563340 | 2_4:+16765233 | None:intergenic |
ATTATACTCCCCGTCGCAGA+AGG | 0.566503 | 2_4:+16763934 | None:intergenic |
ACAGGTTCATGATGTGGCTG+TGG | 0.570506 | 2_4:-16763529 | Msa0318230:intron |
AGCAGTTGCATTCTATCTCA+AGG | 0.573615 | 2_4:-16763628 | Msa0318230:intron |
AGATGCTGATATATCTGAAG+AGG | 0.576120 | 2_4:-16764641 | Msa0318230:CDS |
ACCCAGAAGCAACACAGCAG+TGG | 0.576369 | 2_4:+16764855 | None:intergenic |
CCCAGAAGCAACACAGCAGT+GGG | 0.578353 | 2_4:+16764856 | None:intergenic |
TATTTCCAGTCAATATTAAG+GGG | 0.587860 | 2_4:-16763014 | Msa0318230:CDS |
ATGTAGCCATACCAATATGC+CGG | 0.588017 | 2_4:+16763482 | None:intergenic |
GGTGGAAATTGGAACAACAA+AGG | 0.604202 | 2_4:-16762614 | Msa0318230:three_prime_UTR |
ATGGTTTGCCAGCAATTAGG+GGG | 0.608563 | 2_4:-16764190 | Msa0318230:CDS |
CAGGTTCATGATGTGGCTGT+GGG | 0.612693 | 2_4:-16763528 | Msa0318230:CDS |
TAATGAATGCAGGCAAAGCG+AGG | 0.623838 | 2_4:-16764709 | Msa0318230:intron |
TATGGTTTGCCAGCAATTAG+GGG | 0.634878 | 2_4:-16764191 | Msa0318230:CDS |
AGAACAGCTCGCAAAACCGA+AGG | 0.635960 | 2_4:-16764469 | Msa0318230:CDS |
AAACCACGTTAAATCAAGGA+GGG | 0.638299 | 2_4:+16762372 | None:intergenic |
ACAGGCAGCCATTAACGCGT+AGG | 0.638486 | 2_4:-16762661 | Msa0318230:exon |
AAATCAAGGAGGGAATTCGT+TGG | 0.645604 | 2_4:+16762382 | None:intergenic |
GCAGCATTACAAATACTTCG+CGG | 0.650248 | 2_4:-16764667 | Msa0318230:CDS |
ATTCCCTCCTTGATTTAACG+TGG | 0.654398 | 2_4:-16762375 | Msa0318230:three_prime_UTR |
GAAACCACGTTAAATCAAGG+AGG | 0.655009 | 2_4:+16762371 | None:intergenic |
GTAGTAGTCCCAGAAACCAA+AGG | 0.657750 | 2_4:-16762702 | Msa0318230:CDS |
TTGGAACAGTACTTTCATGG+AGG | 0.660408 | 2_4:-16765027 | Msa0318230:CDS |
TAGGATTTCCTTCTGCGACG+GGG | 0.661364 | 2_4:-16763942 | Msa0318230:CDS |
TGAGTAACAGGTTCATGATG+TGG | 0.666123 | 2_4:-16763535 | Msa0318230:intron |
TTAAGGTAGTCAGGGCACCT+CGG | 0.669152 | 2_4:+16765241 | None:intergenic |
AGGAATGGGAGCAATTCCAT+GGG | 0.675398 | 2_4:-16763345 | Msa0318230:CDS |
GATTGCAGCGTAAAGAACGA+AGG | 0.710685 | 2_4:+16762752 | None:intergenic |
TCCATGGGTTGTGATGTCCG+AGG | 0.731376 | 2_4:-16763330 | Msa0318230:intron |
ATTGCGCCAAAAGAACTCCG+AGG | 0.763517 | 2_4:-16765258 | Msa0318230:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATCAATTTTACATAAATATT+AGG | + | chr2_4:16764138-16764157 | None:intergenic | 10.0% |
!!! | ATTTTGATTATAATTTGTAT+TGG | - | chr2_4:16765197-16765216 | Msa0318230:intron | 10.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr2_4:16765281-16765300 | None:intergenic | 100.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr2_4:16765281-16765300 | None:intergenic | 100.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr2_4:16765281-16765300 | None:intergenic | 100.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr2_4:16765281-16765300 | None:intergenic | 100.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr2_4:16765281-16765300 | None:intergenic | 100.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr2_4:16765281-16765300 | None:intergenic | 100.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr2_4:16765281-16765300 | None:intergenic | 100.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr2_4:16765281-16765300 | None:intergenic | 100.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr2_4:16765281-16765300 | None:intergenic | 100.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr2_4:16765281-16765300 | None:intergenic | 100.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr2_4:16765281-16765300 | None:intergenic | 100.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr2_4:16765281-16765300 | None:intergenic | 100.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr2_4:16765281-16765300 | None:intergenic | 100.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr2_4:16765281-16765300 | None:intergenic | 100.0% |
!!! | TTTATTTTGTTTTGGTTTAT+TGG | - | chr2_4:16763722-16763741 | Msa0318230:intron | 15.0% |
!! | ATTAACCAATAATTAATTCT+TGG | - | chr2_4:16763819-16763838 | Msa0318230:intron | 15.0% |
!! | ATTATCCAAGAATTAATTAT+TGG | + | chr2_4:16763827-16763846 | None:intergenic | 15.0% |
!! | AAATAAAAATAAGTTGTTTG+TGG | + | chr2_4:16763953-16763972 | None:intergenic | 15.0% |
!!! | TACTTTTATTTATGATTTTC+AGG | - | chr2_4:16764923-16764942 | Msa0318230:intron | 15.0% |
!! | ACAAATTATAATCAAAATCA+TGG | + | chr2_4:16765195-16765214 | None:intergenic | 15.0% |
!! | TTAGATGTGTTACATATATA+AGG | - | chr2_4:16762399-16762418 | Msa0318230:intron | 20.0% |
!! | AGAAAAATATACCTGATTTA+AGG | + | chr2_4:16762479-16762498 | None:intergenic | 20.0% |
!!! | CTCAGATTTTTATTTTGTTT+TGG | - | chr2_4:16763714-16763733 | Msa0318230:intron | 20.0% |
!! | ATTTAAAAATAAGAACCTGA+AGG | + | chr2_4:16763801-16763820 | None:intergenic | 20.0% |
!! | AATAAAAATCATGATTGAGT+TGG | + | chr2_4:16763872-16763891 | None:intergenic | 20.0% |
!!! | ATACTCTTATTGTTATTTCT+TGG | - | chr2_4:16764001-16764020 | Msa0318230:intron | 20.0% |
!! | TTGATATTAAAAACTGAAAG+TGG | + | chr2_4:16764414-16764433 | None:intergenic | 20.0% |
!! | ATATTTCCAGTCAATATTAA+GGG | - | chr2_4:16764685-16764704 | Msa0318230:CDS | 20.0% |
!! | AATGTATTAGTATTTACCAT+AGG | + | chr2_4:16764797-16764816 | None:intergenic | 20.0% |
!! | TGATTATCGTATAATAATTC+TGG | + | chr2_4:16764862-16764881 | None:intergenic | 20.0% |
! | CAGCTTAATTGCATTATATT+TGG | + | chr2_4:16763171-16763190 | None:intergenic | 25.0% |
! | CAAATATAATGCAATTAAGC+TGG | - | chr2_4:16763169-16763188 | Msa0318230:intron | 25.0% |
! | AATAGAACAAATATGAGAAG+TGG | + | chr2_4:16763415-16763434 | None:intergenic | 25.0% |
!! | AGGAAGATGAAAATTTTGAA+TGG | + | chr2_4:16763458-16763477 | None:intergenic | 25.0% |
! | AGATACTCATGAAGAAAAAT+AGG | + | chr2_4:16763478-16763497 | None:intergenic | 25.0% |
!! | TATTTTTCTTCATGAGTATC+TGG | - | chr2_4:16763477-16763496 | Msa0318230:intron | 25.0% |
!!! | TATTGGTGTATTTTTGTCAT+AGG | - | chr2_4:16763739-16763758 | Msa0318230:intron | 25.0% |
!!! | GTTATTTCTTGGTTTCAATT+AGG | - | chr2_4:16764012-16764031 | Msa0318230:intron | 25.0% |
!! | TTTTTCTTTTTCTTTGACCT+GGG | - | chr2_4:16764544-16764563 | Msa0318230:intron | 25.0% |
! | GATATTTCCAGTCAATATTA+AGG | - | chr2_4:16764684-16764703 | Msa0318230:CDS | 25.0% |
! | TATTTCCAGTCAATATTAAG+GGG | - | chr2_4:16764686-16764705 | Msa0318230:CDS | 25.0% |
!! | ATTGGTTTCTTGAACTAAAT+GGG | + | chr2_4:16764889-16764908 | None:intergenic | 25.0% |
!!! | TATTGGTTTCTTGAACTAAA+TGG | + | chr2_4:16764890-16764909 | None:intergenic | 25.0% |
! | TCAACAGACTATAAAAAACA+AGG | + | chr2_4:16765143-16765162 | None:intergenic | 25.0% |
ACACATCTAAATAAGAACTG+TGG | + | chr2_4:16762389-16762408 | None:intergenic | 30.0% | |
TGTATCAGTGCATTCATAAT+TGG | - | chr2_4:16762654-16762673 | Msa0318230:exon | 30.0% | |
TAATTGGAACAGTACTTTCA+TGG | - | chr2_4:16762670-16762689 | Msa0318230:CDS | 30.0% | |
TCTTCATATGATCTTCTTAG+TGG | + | chr2_4:16762746-16762765 | None:intergenic | 30.0% | |
AAATAAGTGTTTGCAATTGC+AGG | - | chr2_4:16762814-16762833 | Msa0318230:intron | 30.0% | |
ATTTAGATGAAAACATGCAG+TGG | - | chr2_4:16762928-16762947 | Msa0318230:CDS | 30.0% | |
! | TTCATTATTTGGTTGGTACT+TGG | + | chr2_4:16762978-16762997 | None:intergenic | 30.0% |
ACTAGTTATATAATCCTGTG+TGG | + | chr2_4:16763209-16763228 | None:intergenic | 30.0% | |
AAATGAACTGATATTCAGAG+TGG | + | chr2_4:16763314-16763333 | None:intergenic | 30.0% | |
! | ATTTTCTTCAAGAATGTGTG+TGG | - | chr2_4:16763330-16763349 | Msa0318230:intron | 30.0% |
AGAGGTGGAAAATAAAGTAT+TGG | - | chr2_4:16763368-16763387 | Msa0318230:CDS | 30.0% | |
!! | AGTAGTATTTTTGATCTAGC+AGG | - | chr2_4:16763558-16763577 | Msa0318230:intron | 30.0% |
TATAATATACGCTATCCTTC+AGG | - | chr2_4:16763783-16763802 | Msa0318230:intron | 30.0% | |
!! | AATCATGATTGAGTTGGATT+CGG | + | chr2_4:16763866-16763885 | None:intergenic | 30.0% |
!! | TAAGAGTATCATACATGAAG+CGG | + | chr2_4:16763990-16764009 | None:intergenic | 30.0% |
AAGCTGTAAAGTTCTTAGTT+GGG | + | chr2_4:16764103-16764122 | None:intergenic | 30.0% | |
! | CTCTTTCATTTGCTGATATT+AGG | - | chr2_4:16764310-16764329 | Msa0318230:intron | 30.0% |
! | TACATAGGATCGTTTTCAAT+AGG | - | chr2_4:16764335-16764354 | Msa0318230:intron | 30.0% |
TAAAAACTGAAAGTGGAGAA+AGG | + | chr2_4:16764407-16764426 | None:intergenic | 30.0% | |
!!! | TTAAGTGCAACTCTTGTTTT+TGG | + | chr2_4:16764491-16764510 | None:intergenic | 30.0% |
AAAAGAAAAACAGTTCCAGT+CGG | + | chr2_4:16764534-16764553 | None:intergenic | 30.0% | |
! | GTTTTTCTTTTTCTTTGACC+TGG | - | chr2_4:16764543-16764562 | Msa0318230:intron | 30.0% |
! | TTTTCTTTTTCTTTGACCTG+GGG | - | chr2_4:16764545-16764564 | Msa0318230:intron | 30.0% |
! | CATGAGAAAGTTGAAAGTAT+AGG | + | chr2_4:16764764-16764783 | None:intergenic | 30.0% |
AGTAAACTTGCATGTTCTAT+TGG | + | chr2_4:16764907-16764926 | None:intergenic | 30.0% | |
TAAAAGCCTTGAACAATTAC+AGG | - | chr2_4:16765021-16765040 | Msa0318230:CDS | 30.0% | |
TATGAAACCACGTTAAATCA+AGG | + | chr2_4:16765335-16765354 | None:intergenic | 30.0% | |
TAACGTGGTTTCATAAAGAA+TGG | - | chr2_4:16765340-16765359 | Msa0318230:intron | 30.0% | |
! | TACCTGATTTAAGGTAGTCA+GGG | + | chr2_4:16762470-16762489 | None:intergenic | 35.0% |
! | ATACCTGATTTAAGGTAGTC+AGG | + | chr2_4:16762471-16762490 | None:intergenic | 35.0% |
TTATTACTTACCAGCCATCT+AGG | + | chr2_4:16762892-16762911 | None:intergenic | 35.0% | |
ACCAACCAAATAATGAATGC+AGG | - | chr2_4:16762981-16763000 | Msa0318230:CDS | 35.0% | |
CTTTGCCTGCATTCATTATT+TGG | + | chr2_4:16762989-16763008 | None:intergenic | 35.0% | |
AGATGCTGATATATCTGAAG+AGG | - | chr2_4:16763059-16763078 | Msa0318230:intron | 35.0% | |
GTCTTTATTATTGTGCCTGA+AGG | + | chr2_4:16763142-16763161 | None:intergenic | 35.0% | |
! | TTATGGTTTGCCAGCAATTA+GGG | - | chr2_4:16763508-16763527 | Msa0318230:CDS | 35.0% |
! | AAGCATGATGGTGTTAAACT+TGG | + | chr2_4:16763614-16763633 | None:intergenic | 35.0% |
! | TGATATGCAAGAAAGCATGA+TGG | + | chr2_4:16763626-16763645 | None:intergenic | 35.0% |
!! | ATCATGATTGAGTTGGATTC+GGG | + | chr2_4:16763865-16763884 | None:intergenic | 35.0% |
! | TTTTCACAGATTGTGATCAC+AGG | - | chr2_4:16763890-16763909 | Msa0318230:intron | 35.0% |
AATAAGTTGTTTGTGGCTTC+CGG | + | chr2_4:16763946-16763965 | None:intergenic | 35.0% | |
CTTGGTTTCAATTAGGTATC+TGG | - | chr2_4:16764019-16764038 | Msa0318230:intron | 35.0% | |
TTCAATTAGGTATCTGGATC+AGG | - | chr2_4:16764025-16764044 | Msa0318230:intron | 35.0% | |
GAAGCTGTAAAGTTCTTAGT+TGG | + | chr2_4:16764104-16764123 | None:intergenic | 35.0% | |
TTGATATCCTTGTGAGTAAC+AGG | - | chr2_4:16764153-16764172 | Msa0318230:CDS | 35.0% | |
AATGAAAGAGCAGTGTTACA+TGG | + | chr2_4:16764300-16764319 | None:intergenic | 35.0% | |
TGCTGATATTAGGTCTACAT+AGG | - | chr2_4:16764320-16764339 | Msa0318230:intron | 35.0% | |
! | AGGATCGTTTTCAATAGGAA+TGG | - | chr2_4:16764340-16764359 | Msa0318230:intron | 35.0% |
! | GGATCGTTTTCAATAGGAAT+GGG | - | chr2_4:16764341-16764360 | Msa0318230:intron | 35.0% |
AAAGAAAAACAGTTCCAGTC+GGG | + | chr2_4:16764533-16764552 | None:intergenic | 35.0% | |
TAAATCAACTTCGAATTCGC+CGG | - | chr2_4:16764595-16764614 | Msa0318230:intron | 35.0% | |
! | AAGAGGACACATTTTGTAAC+CGG | + | chr2_4:16764617-16764636 | None:intergenic | 35.0% |
GTGTCCTCTTAGTAAAAAGA+CGG | - | chr2_4:16764627-16764646 | Msa0318230:CDS | 35.0% | |
! | TATGCCGTCTTTTTACTAAG+AGG | + | chr2_4:16764634-16764653 | None:intergenic | 35.0% |
CTTTCAACTTTCTCATGAGT+TGG | - | chr2_4:16764767-16764786 | Msa0318230:intron | 35.0% | |
! | TTGTTCAAGGCTTTTACCTT+TGG | + | chr2_4:16765017-16765036 | None:intergenic | 35.0% |
TTTGCGATTTGTGTAGTGTT+TGG | - | chr2_4:16765065-16765084 | Msa0318230:CDS | 35.0% | |
GGGGATGCATTATACTATTA+AGG | + | chr2_4:16765265-16765284 | None:intergenic | 35.0% | |
AAACCACGTTAAATCAAGGA+GGG | + | chr2_4:16765331-16765350 | None:intergenic | 35.0% | |
TTGGAACAGTACTTTCATGG+AGG | - | chr2_4:16762673-16762692 | Msa0318230:CDS | 40.0% | |
TGGAACAGTACTTTCATGGA+GGG | - | chr2_4:16762674-16762693 | Msa0318230:CDS | 40.0% | |
! | TGGAGGGCTTTAGCTATAAT+CGG | - | chr2_4:16762690-16762709 | Msa0318230:CDS | 40.0% |
GCCTGCATTCATTATTTGGT+TGG | + | chr2_4:16762985-16763004 | None:intergenic | 40.0% | |
! | AGGACGCACAAAAGATTTTG+TGG | - | chr2_4:16763011-16763030 | Msa0318230:CDS | 40.0% |
GCAGCATTACAAATACTTCG+CGG | - | chr2_4:16763033-16763052 | Msa0318230:intron | 40.0% | |
TGAAGAGGCAGAAGAAATTC+AGG | - | chr2_4:16763074-16763093 | Msa0318230:intron | 40.0% | |
AGGTAACTGTGTGTTAGTGT+TGG | - | chr2_4:16763094-16763113 | Msa0318230:intron | 40.0% | |
TATTAAGTGACCTTGCCTTC+AGG | - | chr2_4:16763124-16763143 | Msa0318230:intron | 40.0% | |
TATTATTGTGCCTGAAGGCA+AGG | + | chr2_4:16763137-16763156 | None:intergenic | 40.0% | |
TGAAACAAATCCAGCACCTT+CGG | + | chr2_4:16763250-16763269 | None:intergenic | 40.0% | |
TTCTTCAAGAATGTGTGTGG+TGG | - | chr2_4:16763333-16763352 | Msa0318230:CDS | 40.0% | |
! | TCTTCATGAGTATCTGGAGT+AGG | - | chr2_4:16763483-16763502 | Msa0318230:intron | 40.0% |
! | CTTCATGAGTATCTGGAGTA+GGG | - | chr2_4:16763484-16763503 | Msa0318230:intron | 40.0% |
! | CTTATGGTTTGCCAGCAATT+AGG | - | chr2_4:16763507-16763526 | Msa0318230:CDS | 40.0% |
! | TATGGTTTGCCAGCAATTAG+GGG | - | chr2_4:16763509-16763528 | Msa0318230:CDS | 40.0% |
!! | TCATGATTGAGTTGGATTCG+GGG | + | chr2_4:16763864-16763883 | None:intergenic | 40.0% |
TTAGGTATCTGGATCAGGAT+TGG | - | chr2_4:16764030-16764049 | Msa0318230:intron | 40.0% | |
AGCAGTTGCATTCTATCTCA+AGG | - | chr2_4:16764072-16764091 | Msa0318230:intron | 40.0% | |
TCATGAACCTGTTACTCACA+AGG | + | chr2_4:16764163-16764182 | None:intergenic | 40.0% | |
TGAGTAACAGGTTCATGATG+TGG | - | chr2_4:16764165-16764184 | Msa0318230:CDS | 40.0% | |
ATGTAGCCATACCAATATGC+CGG | + | chr2_4:16764221-16764240 | None:intergenic | 40.0% | |
ACTGAAAGTGGAGAAAGGAT+GGG | + | chr2_4:16764402-16764421 | None:intergenic | 40.0% | |
AACTGAAAGTGGAGAAAGGA+TGG | + | chr2_4:16764403-16764422 | None:intergenic | 40.0% | |
AAGAAAAACAGTTCCAGTCG+GGG | + | chr2_4:16764532-16764551 | None:intergenic | 40.0% | |
GCATAGCAACATTAGTGAAC+TGG | - | chr2_4:16764719-16764738 | Msa0318230:intron | 40.0% | |
GCAACATTAGTGAACTGGTT+TGG | - | chr2_4:16764724-16764743 | Msa0318230:intron | 40.0% | |
!! | GGCTTTTACCTTTGGTTTCT+GGG | + | chr2_4:16765009-16765028 | None:intergenic | 40.0% |
!! | AGGCTTTTACCTTTGGTTTC+TGG | + | chr2_4:16765010-16765029 | None:intergenic | 40.0% |
! | GTGTAGTGTTTGGTGGAAAT+TGG | - | chr2_4:16765075-16765094 | Msa0318230:intron | 40.0% |
GGTGGAAATTGGAACAACAA+AGG | - | chr2_4:16765086-16765105 | Msa0318230:intron | 40.0% | |
AAATCAAGGAGGGAATTCGT+TGG | + | chr2_4:16765321-16765340 | None:intergenic | 40.0% | |
ATTCCCTCCTTGATTTAACG+TGG | - | chr2_4:16765325-16765344 | Msa0318230:intron | 40.0% | |
GAAACCACGTTAAATCAAGG+AGG | + | chr2_4:16765332-16765351 | None:intergenic | 40.0% | |
GCAATTTCTGCTACGAACAC+AGG | + | chr2_4:16762427-16762446 | None:intergenic | 45.0% | |
TGCCCTGACTACCTTAAATC+AGG | - | chr2_4:16762465-16762484 | Msa0318230:three_prime_UTR | 45.0% | |
TCATTCCAGAGTCTCCTAGA+TGG | - | chr2_4:16762875-16762894 | Msa0318230:intron | 45.0% | |
TAATGAATGCAGGCAAAGCG+AGG | - | chr2_4:16762991-16763010 | Msa0318230:CDS | 45.0% | |
!! | AATGTGTGTGGTGGACTACT+AGG | - | chr2_4:16763342-16763361 | Msa0318230:CDS | 45.0% |
! | AGTATCTGGAGTAGGGCTTA+TGG | - | chr2_4:16763491-16763510 | Msa0318230:intron | 45.0% |
! | ATGGTTTGCCAGCAATTAGG+GGG | - | chr2_4:16763510-16763529 | Msa0318230:CDS | 45.0% |
!! | CATTGATTCCCCCTAATTGC+TGG | + | chr2_4:16763521-16763540 | None:intergenic | 45.0% |
CAGCAATTAGGGGGAATCAA+TGG | - | chr2_4:16763519-16763538 | Msa0318230:CDS | 45.0% | |
CATAGGATTTCCTTCTGCGA+CGG | - | chr2_4:16763756-16763775 | Msa0318230:intron | 45.0% | |
ATAGGATTTCCTTCTGCGAC+GGG | - | chr2_4:16763757-16763776 | Msa0318230:intron | 45.0% | |
!! | CATGATTGAGTTGGATTCGG+GGG | + | chr2_4:16763863-16763882 | None:intergenic | 45.0% |
CAGATTGTGATCACAGGTGT+TGG | - | chr2_4:16763896-16763915 | Msa0318230:intron | 45.0% | |
! | CCATACCAATATGCCGGTTA+CGG | + | chr2_4:16764215-16764234 | None:intergenic | 45.0% |
TAGGAATGGGAGCAATTCCA+TGG | - | chr2_4:16764354-16764373 | Msa0318230:intron | 45.0% | |
AGGAATGGGAGCAATTCCAT+GGG | - | chr2_4:16764355-16764374 | Msa0318230:intron | 45.0% | |
CTGAAAGTGGAGAAAGGATG+GGG | + | chr2_4:16764401-16764420 | None:intergenic | 45.0% | |
! | TCTTTTTCTTTGACCTGGGG+AGG | - | chr2_4:16764548-16764567 | Msa0318230:intron | 45.0% |
TGCATAAATAGATCCTCCCC+AGG | + | chr2_4:16764564-16764583 | None:intergenic | 45.0% | |
TCCAGTCAATATTAAGGGGC+AGG | - | chr2_4:16764690-16764709 | Msa0318230:CDS | 45.0% | |
!! | TAGTGAACTGGTTTGGTGCA+TGG | - | chr2_4:16764731-16764750 | Msa0318230:intron | 45.0% |
GATTGCAGCGTAAAGAACGA+AGG | + | chr2_4:16764951-16764970 | None:intergenic | 45.0% | |
GTAGTAGTCCCAGAAACCAA+AGG | - | chr2_4:16764998-16765017 | Msa0318230:intron | 45.0% | |
TGGCTGCCTGTAATTGTTCA+AGG | + | chr2_4:16765030-16765049 | None:intergenic | 45.0% | |
GCAAACTTCCTACGCGTTAA+TGG | + | chr2_4:16765050-16765069 | None:intergenic | 45.0% | |
GCGATTTGTGTAGTGTTTGG+TGG | - | chr2_4:16765068-16765087 | Msa0318230:intron | 45.0% | |
ATTGCGCCAAAAGAACTCCG+AGG | - | chr2_4:16762442-16762461 | Msa0318230:three_prime_UTR | 50.0% | |
! | TTAAGGTAGTCAGGGCACCT+CGG | + | chr2_4:16762462-16762481 | None:intergenic | 50.0% |
GCAACACAGCAGTGGGAATA+AGG | + | chr2_4:16762840-16762859 | None:intergenic | 50.0% | |
TGTATCTGTCACTGCCACAC+AGG | - | chr2_4:16763192-16763211 | Msa0318230:intron | 50.0% | |
AGAACAGCTCGCAAAACCGA+AGG | - | chr2_4:16763231-16763250 | Msa0318230:intron | 50.0% | |
!! | TGGTGGACTACTAGGTTGAG+AGG | - | chr2_4:16763350-16763369 | Msa0318230:CDS | 50.0% |
! | TGGACTACTAGGTTGAGAGG+TGG | - | chr2_4:16763353-16763372 | Msa0318230:CDS | 50.0% |
TAGGATTTCCTTCTGCGACG+GGG | - | chr2_4:16763758-16763777 | Msa0318230:intron | 50.0% | |
ATTATACTCCCCGTCGCAGA+AGG | + | chr2_4:16763769-16763788 | None:intergenic | 50.0% | |
!! | TCTGGATCAGGATTGGTTGC+AGG | - | chr2_4:16764037-16764056 | Msa0318230:intron | 50.0% |
ACAGGTTCATGATGTGGCTG+TGG | - | chr2_4:16764171-16764190 | Msa0318230:CDS | 50.0% | |
CAGGTTCATGATGTGGCTGT+GGG | - | chr2_4:16764172-16764191 | Msa0318230:CDS | 50.0% | |
ACTTGCCGTAACCGGCATAT+TGG | - | chr2_4:16764207-16764226 | Msa0318230:CDS | 50.0% | |
CCGTAACCGGCATATTGGTA+TGG | - | chr2_4:16764212-16764231 | Msa0318230:intron | 50.0% | |
!! | GAAAGGATGGGGAAGTACCT+CGG | + | chr2_4:16764390-16764409 | None:intergenic | 50.0% |
AGCAAATGTTGATCCCCGAC+TGG | - | chr2_4:16764516-16764535 | Msa0318230:intron | 50.0% | |
GCCTGCCCCTTAATATTGAC+TGG | + | chr2_4:16764694-16764713 | None:intergenic | 50.0% | |
GTCAATATTAAGGGGCAGGC+AGG | - | chr2_4:16764694-16764713 | Msa0318230:CDS | 50.0% | |
! | CTCATGAGTTGGAGCTCCTA+TGG | - | chr2_4:16764778-16764797 | Msa0318230:intron | 50.0% |
AAGGAGGGAATTCGTTGGTG+GGG | + | chr2_4:16765316-16765335 | None:intergenic | 50.0% | |
CAAGGAGGGAATTCGTTGGT+GGG | + | chr2_4:16765317-16765336 | None:intergenic | 50.0% | |
TCAAGGAGGGAATTCGTTGG+TGG | + | chr2_4:16765318-16765337 | None:intergenic | 50.0% | |
!! | AGGGCACCTCGGAGTTCTTT+TGG | + | chr2_4:16762451-16762470 | None:intergenic | 55.0% |
!! | TCCCACTGCTGTGTTGCTTC+TGG | - | chr2_4:16762843-16762862 | Msa0318230:intron | 55.0% |
CCCAGAAGCAACACAGCAGT+GGG | + | chr2_4:16762847-16762866 | None:intergenic | 55.0% | |
!! | CCCACTGCTGTGTTGCTTCT+GGG | - | chr2_4:16762844-16762863 | Msa0318230:intron | 55.0% |
ACCCAGAAGCAACACAGCAG+TGG | + | chr2_4:16762848-16762867 | None:intergenic | 55.0% | |
TCCAGAGTCTCCTAGATGGC+TGG | - | chr2_4:16762879-16762898 | Msa0318230:intron | 55.0% | |
ACCAGCCATCTAGGAGACTC+TGG | + | chr2_4:16762883-16762902 | None:intergenic | 55.0% | |
GCAGCCCTCATAGATAGAGC+AGG | - | chr2_4:16763920-16763939 | Msa0318230:CDS | 55.0% | |
CCGGCCTGCTCTATCTATGA+GGG | + | chr2_4:16763927-16763946 | None:intergenic | 55.0% | |
CCCTCATAGATAGAGCAGGC+CGG | - | chr2_4:16763924-16763943 | Msa0318230:CDS | 55.0% | |
TCCGGCCTGCTCTATCTATG+AGG | + | chr2_4:16763928-16763947 | None:intergenic | 55.0% | |
! | TCCATGGGTTGTGATGTCCG+AGG | - | chr2_4:16764370-16764389 | Msa0318230:intron | 55.0% |
ACCTCGGACATCACAACCCA+TGG | + | chr2_4:16764374-16764393 | None:intergenic | 55.0% | |
ACAGGCAGCCATTAACGCGT+AGG | - | chr2_4:16765039-16765058 | Msa0318230:CDS | 55.0% | |
! | AGGAGGGAATTCGTTGGTGG+GGG | + | chr2_4:16765315-16765334 | None:intergenic | 55.0% |
! | GCTCGCAAAACCGAAGGTGC+TGG | - | chr2_4:16763237-16763256 | Msa0318230:intron | 60.0% |
GTCCCAGCACTTGCCGTAAC+CGG | - | chr2_4:16764199-16764218 | Msa0318230:CDS | 60.0% | |
! | TGCCGGTTACGGCAAGTGCT+GGG | + | chr2_4:16764204-16764223 | None:intergenic | 60.0% |
! | ATGCCGGTTACGGCAAGTGC+TGG | + | chr2_4:16764205-16764224 | None:intergenic | 60.0% |
! | AGGGAATTCGTTGGTGGGGG+GGG | + | chr2_4:16765312-16765331 | None:intergenic | 60.0% |
! | GAGGGAATTCGTTGGTGGGG+GGG | + | chr2_4:16765313-16765332 | None:intergenic | 60.0% |
! | GGAGGGAATTCGTTGGTGGG+GGG | + | chr2_4:16765314-16765333 | None:intergenic | 60.0% |
! | AATTCGTTGGTGGGGGGGGG+GGG | + | chr2_4:16765308-16765327 | None:intergenic | 65.0% |
! | GAATTCGTTGGTGGGGGGGG+GGG | + | chr2_4:16765309-16765328 | None:intergenic | 65.0% |
! | GGAATTCGTTGGTGGGGGGG+GGG | + | chr2_4:16765310-16765329 | None:intergenic | 65.0% |
! | GGGAATTCGTTGGTGGGGGG+GGG | + | chr2_4:16765311-16765330 | None:intergenic | 65.0% |
! | ATTCGTTGGTGGGGGGGGGG+GGG | + | chr2_4:16765307-16765326 | None:intergenic | 70.0% |
! | TTCGTTGGTGGGGGGGGGGG+GGG | + | chr2_4:16765306-16765325 | None:intergenic | 75.0% |
!! | TCGTTGGTGGGGGGGGGGGG+GGG | + | chr2_4:16765305-16765324 | None:intergenic | 80.0% |
! | TTGGTGGGGGGGGGGGGGGG+GGG | + | chr2_4:16765302-16765321 | None:intergenic | 85.0% |
!! | GTTGGTGGGGGGGGGGGGGG+GGG | + | chr2_4:16765303-16765322 | None:intergenic | 85.0% |
!! | CGTTGGTGGGGGGGGGGGGG+GGG | + | chr2_4:16765304-16765323 | None:intergenic | 85.0% |
! | TGGTGGGGGGGGGGGGGGGG+GGG | + | chr2_4:16765301-16765320 | None:intergenic | 90.0% |
! | TGGGGGGGGGGGGGGGGGGG+GGG | + | chr2_4:16765298-16765317 | None:intergenic | 95.0% |
! | GTGGGGGGGGGGGGGGGGGG+GGG | + | chr2_4:16765299-16765318 | None:intergenic | 95.0% |
! | GGTGGGGGGGGGGGGGGGGG+GGG | + | chr2_4:16765300-16765319 | None:intergenic | 95.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_4 | gene | 16762350 | 16765372 | 16762350 | ID=Msa0318230;Name=Msa0318230 |
chr2_4 | mRNA | 16762350 | 16765372 | 16762350 | ID=Msa0318230-mRNA-1;Parent=Msa0318230;Name=Msa0318230-mRNA-1;_AED=0.19;_eAED=0.19;_QI=0|0.76|0.64|1|0.84|0.71|14|282|303 |
chr2_4 | exon | 16762350 | 16762403 | 16762350 | ID=Msa0318230-mRNA-1:exon:6271;Parent=Msa0318230-mRNA-1 |
chr2_4 | exon | 16762434 | 16762777 | 16762434 | ID=Msa0318230-mRNA-1:exon:6270;Parent=Msa0318230-mRNA-1 |
chr2_4 | exon | 16762923 | 16763037 | 16762923 | ID=Msa0318230-mRNA-1:exon:6269;Parent=Msa0318230-mRNA-1 |
chr2_4 | exon | 16763331 | 16763390 | 16763331 | ID=Msa0318230-mRNA-1:exon:6268;Parent=Msa0318230-mRNA-1 |
chr2_4 | exon | 16763494 | 16763547 | 16763494 | ID=Msa0318230-mRNA-1:exon:6267;Parent=Msa0318230-mRNA-1 |
chr2_4 | exon | 16763629 | 16763688 | 16763629 | ID=Msa0318230-mRNA-1:exon:6266;Parent=Msa0318230-mRNA-1 |
chr2_4 | exon | 16763918 | 16763961 | 16763918 | ID=Msa0318230-mRNA-1:exon:6265;Parent=Msa0318230-mRNA-1 |
chr2_4 | exon | 16764143 | 16764229 | 16764143 | ID=Msa0318230-mRNA-1:exon:6264;Parent=Msa0318230-mRNA-1 |
chr2_4 | exon | 16764424 | 16764508 | 16764424 | ID=Msa0318230-mRNA-1:exon:6263;Parent=Msa0318230-mRNA-1 |
chr2_4 | exon | 16764627 | 16764719 | 16764627 | ID=Msa0318230-mRNA-1:exon:6262;Parent=Msa0318230-mRNA-1 |
chr2_4 | exon | 16764822 | 16764886 | 16764822 | ID=Msa0318230-mRNA-1:exon:6261;Parent=Msa0318230-mRNA-1 |
chr2_4 | exon | 16765011 | 16765085 | 16765011 | ID=Msa0318230-mRNA-1:exon:6260;Parent=Msa0318230-mRNA-1 |
chr2_4 | exon | 16765236 | 16765282 | 16765236 | ID=Msa0318230-mRNA-1:exon:6259;Parent=Msa0318230-mRNA-1 |
chr2_4 | exon | 16765362 | 16765372 | 16765362 | ID=Msa0318230-mRNA-1:exon:6258;Parent=Msa0318230-mRNA-1 |
chr2_4 | CDS | 16765362 | 16765372 | 16765362 | ID=Msa0318230-mRNA-1:cds;Parent=Msa0318230-mRNA-1 |
chr2_4 | CDS | 16765236 | 16765282 | 16765236 | ID=Msa0318230-mRNA-1:cds;Parent=Msa0318230-mRNA-1 |
chr2_4 | CDS | 16765011 | 16765085 | 16765011 | ID=Msa0318230-mRNA-1:cds;Parent=Msa0318230-mRNA-1 |
chr2_4 | CDS | 16764822 | 16764886 | 16764822 | ID=Msa0318230-mRNA-1:cds;Parent=Msa0318230-mRNA-1 |
chr2_4 | CDS | 16764627 | 16764719 | 16764627 | ID=Msa0318230-mRNA-1:cds;Parent=Msa0318230-mRNA-1 |
chr2_4 | CDS | 16764424 | 16764508 | 16764424 | ID=Msa0318230-mRNA-1:cds;Parent=Msa0318230-mRNA-1 |
chr2_4 | CDS | 16764143 | 16764229 | 16764143 | ID=Msa0318230-mRNA-1:cds;Parent=Msa0318230-mRNA-1 |
chr2_4 | CDS | 16763918 | 16763961 | 16763918 | ID=Msa0318230-mRNA-1:cds;Parent=Msa0318230-mRNA-1 |
chr2_4 | CDS | 16763629 | 16763688 | 16763629 | ID=Msa0318230-mRNA-1:cds;Parent=Msa0318230-mRNA-1 |
chr2_4 | CDS | 16763494 | 16763547 | 16763494 | ID=Msa0318230-mRNA-1:cds;Parent=Msa0318230-mRNA-1 |
chr2_4 | CDS | 16763331 | 16763390 | 16763331 | ID=Msa0318230-mRNA-1:cds;Parent=Msa0318230-mRNA-1 |
chr2_4 | CDS | 16762923 | 16763037 | 16762923 | ID=Msa0318230-mRNA-1:cds;Parent=Msa0318230-mRNA-1 |
chr2_4 | CDS | 16762662 | 16762777 | 16762662 | ID=Msa0318230-mRNA-1:cds;Parent=Msa0318230-mRNA-1 |
chr2_4 | three_prime_UTR | 16762434 | 16762661 | 16762434 | ID=Msa0318230-mRNA-1:three_prime_utr;Parent=Msa0318230-mRNA-1 |
chr2_4 | three_prime_UTR | 16762350 | 16762403 | 16762350 | ID=Msa0318230-mRNA-1:three_prime_utr;Parent=Msa0318230-mRNA-1 |
Gene Sequence |
Protein sequence |