AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1162980

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1162980 MtrunA17_Chr7g0259221 98.526 475 7 0 1 475 3 477 0.0 941
Msa1162980 MtrunA17_Chr7g0259471 90.737 475 44 0 1 475 1 475 0.0 875
Msa1162980 MtrunA17_Chr4g0066581 56.790 486 199 3 1 475 3 488 0.0 566
Msa1162980 MtrunA17_Chr2g0286721 55.901 483 205 3 1 475 3 485 0.0 550
Msa1162980 MtrunA17_Chr7g0273281 51.304 460 210 1 30 475 38 497 3.77e-167 481
Msa1162980 MtrunA17_Chr8g0373181 42.975 484 260 4 1 470 1 482 1.84e-138 407
Msa1162980 MtrunA17_Chr1g0155221 46.296 432 226 2 45 470 54 485 1.31e-135 400
Msa1162980 MtrunA17_Chr8g0373191 40.084 474 253 5 9 472 4 456 3.51e-119 357
Msa1162980 MtrunA17_Chr7g0273261 50.000 226 111 1 249 474 15 238 2.11e-79 248
Msa1162980 MtrunA17_Chr5g0404191 38.790 281 159 3 3 272 4 282 9.72e-69 221
Msa1162980 MtrunA17_Chr7g0273271 57.865 178 75 0 42 219 29 206 3.99e-63 204
Msa1162980 MtrunA17_Chr6g0457781 31.674 442 282 8 46 475 111 544 1.57e-61 209
Msa1162980 MtrunA17_Chr4g0039651 30.522 498 302 13 4 471 15 498 1.18e-60 206
Msa1162980 MtrunA17_Chr1g0213631 33.592 387 236 7 100 470 48 429 1.24e-59 202
Msa1162980 MtrunA17_Chr7g0250881 30.543 442 285 8 46 474 71 503 7.23e-59 201
Msa1162980 MtrunA17_Chr4g0021771 29.243 489 307 13 10 470 22 499 1.05e-58 202
Msa1162980 MtrunA17_Chr4g0032021 30.849 483 294 12 24 473 79 554 2.14e-55 193
Msa1162980 MtrunA17_Chr7g0214451 33.419 389 237 8 98 470 94 476 2.36e-54 189
Msa1162980 MtrunA17_Chr1g0213611 32.308 390 240 7 100 470 141 525 3.88e-54 190
Msa1162980 MtrunA17_Chr2g0282031 28.807 486 326 6 2 470 15 497 2.09e-52 184
Msa1162980 MtrunA17_Chr4g0034681 28.364 483 310 8 22 472 12 490 4.05e-52 184
Msa1162980 MtrunA17_Chr3g0144361 30.206 437 267 8 68 470 56 488 1.18e-51 182
Msa1162980 MtrunA17_Chr5g0432581 29.253 482 301 13 21 470 6 479 2.20e-45 165
Msa1162980 MtrunA17_Chr3g0115721 29.208 404 270 6 80 469 82 483 6.63e-45 164
Msa1162980 MtrunA17_Chr6g0485661 27.505 469 313 7 23 465 35 502 7.62e-44 161
Msa1162980 MtrunA17_Chr3g0115711 28.607 402 274 5 80 469 82 482 8.65e-44 161
Msa1162980 MtrunA17_Chr3g0115741 29.412 408 264 9 80 469 85 486 1.78e-43 160
Msa1162980 MtrunA17_Chr4g0036021 28.899 436 275 10 68 472 55 486 8.25e-43 158
Msa1162980 MtrunA17_Chr7g0221631 87.654 81 8 1 360 440 39 117 4.63e-42 145
Msa1162980 MtrunA17_Chr4g0004821 30.928 485 303 13 10 475 3 474 1.64e-41 154
Msa1162980 MtrunA17_Chr3g0115751 28.571 406 270 8 80 469 87 488 3.52e-41 154
Msa1162980 MtrunA17_Chr8g0373531 28.758 459 289 12 44 470 27 479 4.04e-41 153
Msa1162980 MtrunA17_Chr3g0115781 28.079 406 274 7 80 470 84 486 2.89e-40 151
Msa1162980 MtrunA17_Chr6g0486021 28.151 476 301 12 22 473 28 486 4.07e-40 150
Msa1162980 MtrunA17_Chr4g0065324 28.536 403 271 7 80 469 88 486 6.07e-40 150
Msa1162980 MtrunA17_Chr3g0085971 27.764 407 275 8 80 470 82 485 4.75e-39 148
Msa1162980 MtrunA17_Chr8g0390521 28.348 448 281 12 52 471 34 469 3.87e-38 145
Msa1162980 MtrunA17_Chr8g0390141 27.331 472 303 12 34 469 18 485 1.05e-37 144
Msa1162980 MtrunA17_Chr5g0420841 28.676 408 270 9 80 470 82 485 1.17e-37 144
Msa1162980 MtrunA17_Chr3g0078791 26.905 420 273 7 62 469 13 410 3.52e-37 141
Msa1162980 MtrunA17_Chr1g0205671 26.781 407 283 6 80 473 83 487 6.74e-37 142
Msa1162980 MtrunA17_Chr5g0403831 26.697 442 279 11 68 471 59 493 1.08e-36 141
Msa1162980 MtrunA17_Chr1g0164851 27.371 464 302 8 40 470 23 484 2.43e-36 140
Msa1162980 MtrunA17_Chr5g0394341 25.799 407 287 5 80 473 83 487 3.15e-36 140
Msa1162980 MtrunA17_Chr4g0065311 27.792 403 270 8 82 469 82 478 3.37e-36 139
Msa1162980 MtrunA17_Chr1g0164871 27.155 464 303 8 40 470 23 484 3.55e-36 140
Msa1162980 MtrunA17_Chr1g0205681 27.845 413 275 9 78 473 82 488 3.69e-36 139
Msa1162980 MtrunA17_Chr1g0205691 26.471 408 283 6 80 473 83 487 6.11e-36 139
Msa1162980 MtrunA17_Chr3g0128081 28.079 406 273 7 80 469 83 485 9.30e-36 139
Msa1162980 MtrunA17_Chr3g0128171 28.362 409 268 7 80 469 36 438 1.70e-35 137
Msa1162980 MtrunA17_Chr2g0303731 29.942 344 218 8 35 359 22 361 3.74e-35 138
Msa1162980 MtrunA17_Chr2g0303731 41.000 100 56 2 373 470 452 550 2.57e-14 75.5
Msa1162980 MtrunA17_Chr5g0417611 28.117 409 269 8 80 469 84 486 8.70e-35 136
Msa1162980 MtrunA17_Chr3g0121674 31.741 293 171 9 194 469 2 282 1.12e-34 131
Msa1162980 MtrunA17_Chr3g0119401 26.522 460 301 11 38 475 90 534 5.31e-34 134
Msa1162980 MtrunA17_Chr6g0486681 25.118 422 292 9 69 469 67 485 6.98e-34 133
Msa1162980 MtrunA17_Chr6g0486671 25.118 422 292 9 69 469 67 485 6.98e-34 133
Msa1162980 MtrunA17_Chr8g0376601 31.183 279 175 5 102 367 91 365 9.41e-34 134
Msa1162980 MtrunA17_Chr8g0376601 39.130 92 55 1 373 463 450 541 4.74e-13 71.2
Msa1162980 MtrunA17_Chr8g0390261 26.714 423 284 9 69 469 67 485 1.27e-33 132
Msa1162980 MtrunA17_Chr8g0376611 30.970 268 172 4 89 343 11 278 1.72e-33 132
Msa1162980 MtrunA17_Chr8g0376611 36.449 107 59 2 373 474 382 484 2.73e-13 72.0
Msa1162980 MtrunA17_Chr4g0048411 27.344 384 256 7 105 470 108 486 2.77e-32 129
Msa1162980 MtrunA17_Chr7g0257631 27.000 400 277 7 82 469 122 518 2.80e-32 129
Msa1162980 MtrunA17_Chr2g0303701 29.670 273 174 5 100 358 89 357 3.23e-31 126
Msa1162980 MtrunA17_Chr3g0115731 26.842 380 246 6 98 469 107 462 3.84e-31 125
Msa1162980 MtrunA17_Chr5g0437021 26.609 466 303 10 40 470 23 484 1.03e-30 124
Msa1162980 MtrunA17_Chr5g0404181 51.020 98 48 0 373 470 31 128 1.61e-30 115
Msa1162980 MtrunA17_Chr4g0065351 28.923 325 214 6 158 469 1 321 2.04e-30 121
Msa1162980 MtrunA17_Chr4g0048051 28.052 385 250 7 105 469 108 485 2.61e-30 123
Msa1162980 MtrunA17_Chr3g0078971 25.553 407 282 8 80 470 83 484 4.92e-30 122
Msa1162980 MtrunA17_Chr5g0445601 26.000 400 281 7 82 469 88 484 1.01e-29 121
Msa1162980 MtrunA17_Chr8g0376631 29.572 257 168 4 98 341 87 343 1.25e-29 122
Msa1162980 MtrunA17_Chr8g0376631 38.835 103 54 2 373 470 451 549 2.66e-14 75.1
Msa1162980 MtrunA17_Chr3g0078991 27.479 353 238 8 133 470 136 485 1.29e-29 121
Msa1162980 MtrunA17_Chr7g0259451 92.000 50 4 0 389 438 1 50 1.18e-26 101
Msa1162980 MtrunA17_Chr2g0290181 30.070 286 178 7 98 364 88 370 2.89e-26 112
Msa1162980 MtrunA17_Chr2g0290181 35.354 99 63 1 373 470 455 553 8.38e-13 70.5
Msa1162980 MtrunA17_Chr1g0173341 94.545 55 3 0 307 361 67 121 3.55e-26 102
Msa1162980 MtrunA17_Chr3g0144261 37.297 185 108 3 68 245 32 215 1.01e-25 110
Msa1162980 MtrunA17_Chr3g0144261 31.250 208 126 3 274 467 507 711 3.64e-19 90.9
Msa1162980 MtrunA17_Chr2g0290161 28.289 304 169 8 98 384 21 292 6.87e-22 98.2
Msa1162980 MtrunA17_Chr5g0419321 29.528 254 153 6 237 467 479 729 5.41e-20 93.2
Msa1162980 MtrunA17_Chr5g0419321 30.151 199 129 4 54 245 50 245 6.20e-18 87.0
Msa1162980 MtrunA17_Chr3g0146061 30.088 226 140 4 257 467 499 721 6.30e-20 93.2
Msa1162980 MtrunA17_Chr3g0146061 33.889 180 108 5 68 237 32 210 4.77e-16 80.9
Msa1162980 MtrunA17_Chr5g0407441 29.741 232 145 5 251 467 475 703 3.39e-18 87.8
Msa1162980 MtrunA17_Chr5g0407441 31.383 188 117 5 68 245 32 217 2.62e-17 85.1
Msa1162980 MtrunA17_Chr8g0370151 29.327 208 130 4 274 467 138 342 1.65e-17 84.0
Msa1162980 MtrunA17_Chr5g0434261 25.083 303 182 8 200 463 7 303 2.93e-17 82.8
Msa1162980 MtrunA17_Chr5g0434231 30.058 173 94 3 84 256 9 154 3.29e-15 73.2
Msa1162980 MtrunA17_Chr8g0370141 29.630 189 119 7 68 245 32 217 2.54e-14 74.7
Msa1162980 MtrunA17_Chr5g0434251 35.514 107 60 2 373 474 38 140 4.67e-13 67.0
Msa1162980 MtrunA17_Chr2g0319001 25.248 404 245 18 89 461 133 510 5.34e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1162980 AT2G48020.2 71.058 463 129 1 12 474 5 462 0.0 686
Msa1162980 AT2G48020.1 71.058 463 129 1 12 474 5 462 0.0 686
Msa1162980 AT5G18840.1 56.965 481 198 4 1 474 1 479 0.0 552
Msa1162980 AT3G05150.1 55.437 469 202 3 4 471 5 467 0.0 528
Msa1162980 AT3G05150.3 55.437 469 202 3 4 471 5 467 0.0 528
Msa1162980 AT3G05150.2 55.202 471 204 3 4 473 5 469 0.0 528
Msa1162980 AT2G48020.4 69.106 369 109 1 12 380 5 368 0.0 526
Msa1162980 AT1G54730.2 54.079 429 197 0 45 473 37 465 1.39e-169 486
Msa1162980 AT2G48020.3 69.670 333 96 1 15 347 8 335 1.11e-168 479
Msa1162980 AT1G54730.3 55.330 394 176 0 45 438 37 430 4.95e-157 452
Msa1162980 AT1G54730.5 51.748 429 186 1 45 473 37 444 2.62e-156 451
Msa1162980 AT1G08920.1 47.356 435 229 0 40 474 32 466 1.09e-145 425
Msa1162980 AT3G05165.3 44.181 464 254 1 11 474 6 464 6.07e-144 421
Msa1162980 AT3G05165.2 44.181 464 254 1 11 474 6 464 6.07e-144 421
Msa1162980 AT3G05165.1 44.181 464 254 1 11 474 6 464 6.07e-144 421
Msa1162980 AT1G54730.4 52.792 394 165 1 45 438 37 409 1.27e-143 418
Msa1162980 AT1G08920.2 46.606 442 229 1 40 474 32 473 3.91e-143 419
Msa1162980 AT1G08930.1 46.667 435 232 0 40 474 58 492 5.25e-142 417
Msa1162980 AT1G08930.2 46.667 435 232 0 40 474 58 492 5.25e-142 417
Msa1162980 AT3G05160.1 44.348 460 251 1 15 474 1 455 8.32e-142 415
Msa1162980 AT3G20460.1 44.304 474 253 2 1 474 25 487 2.40e-141 415
Msa1162980 AT3G05155.1 44.493 454 248 2 22 474 9 459 1.77e-138 406
Msa1162980 AT1G19450.1 43.265 490 254 5 1 471 1 485 5.41e-137 404
Msa1162980 AT1G54730.9 54.167 360 165 0 45 404 37 396 1.38e-136 400
Msa1162980 AT1G54730.7 54.167 360 165 0 45 404 37 396 1.38e-136 400
Msa1162980 AT1G75220.1 43.299 485 260 5 1 471 1 484 4.34e-135 399
Msa1162980 AT3G05400.1 45.934 455 240 3 21 470 3 456 6.04e-134 395
Msa1162980 AT5G27350.1 43.601 461 257 1 13 473 7 464 9.30e-134 395
Msa1162980 AT5G27360.1 43.197 463 260 1 11 473 9 468 1.25e-133 395
Msa1162980 AT4G04750.1 42.766 470 256 3 5 472 12 470 3.23e-133 394
Msa1162980 AT4G04750.2 42.766 470 256 3 5 472 12 470 3.23e-133 394
Msa1162980 AT1G08920.3 47.619 399 209 0 40 438 32 430 6.23e-133 392
Msa1162980 AT5G27360.3 43.197 463 260 1 11 473 57 516 7.92e-133 394
Msa1162980 AT4G04750.3 42.766 470 256 3 5 472 56 514 1.41e-132 394
Msa1162980 AT4G04760.1 45.103 439 236 2 36 471 29 465 2.65e-131 389
Msa1162980 AT3G05160.3 46.173 405 218 0 70 474 2 406 1.92e-130 384
Msa1162980 AT3G05160.2 46.173 405 218 0 70 474 2 406 1.92e-130 384
Msa1162980 AT3G05165.6 43.418 433 240 1 11 443 6 433 3.58e-129 384
Msa1162980 AT1G54730.8 51.389 360 154 1 45 404 37 375 2.97e-123 365
Msa1162980 AT3G05400.2 44.176 455 228 4 21 470 3 436 5.89e-123 366
Msa1162980 AT4G04760.3 45.679 405 217 1 70 471 2 406 3.39e-122 363
Msa1162980 AT3G05165.4 42.721 419 235 1 11 429 6 419 1.53e-120 361
Msa1162980 AT3G05165.5 42.721 419 235 1 11 429 6 419 1.53e-120 361
Msa1162980 AT1G08890.1 39.434 459 274 1 15 473 6 460 1.20e-118 356
Msa1162980 AT1G08900.1 41.299 431 253 0 43 473 28 458 1.07e-117 353
Msa1162980 AT1G08900.2 41.299 431 253 0 43 473 28 458 1.07e-117 353
Msa1162980 AT4G04760.2 43.619 431 233 3 46 471 37 462 5.20e-117 352
Msa1162980 AT1G54730.11 56.711 298 129 0 45 342 37 334 5.20e-117 347
Msa1162980 AT1G08900.5 41.787 414 241 0 60 473 3 416 2.14e-114 343
Msa1162980 AT1G08900.3 40.603 431 248 2 43 473 28 450 3.20e-111 337
Msa1162980 AT1G54730.10 56.679 277 120 0 45 321 37 313 9.88e-108 323
Msa1162980 AT1G54730.6 56.679 277 120 0 45 321 37 313 9.88e-108 323
Msa1162980 AT5G27360.2 43.956 364 204 0 110 473 1 364 1.59e-107 324
Msa1162980 AT5G27360.5 43.956 364 204 0 110 473 1 364 1.59e-107 324
Msa1162980 AT1G08900.4 41.667 396 231 0 43 438 28 423 3.79e-105 320
Msa1162980 AT5G27360.4 40.625 384 225 1 11 394 9 389 1.69e-98 303
Msa1162980 AT3G05155.2 43.925 321 177 1 22 342 9 326 1.00e-91 282
Msa1162980 AT5G17010.1 32.329 498 289 15 8 471 17 500 2.77e-59 203
Msa1162980 AT5G17010.3 32.329 498 289 15 8 471 17 500 2.77e-59 203
Msa1162980 AT5G17010.4 32.329 498 289 15 8 471 17 500 2.77e-59 203
Msa1162980 AT5G16150.2 30.700 443 285 8 46 475 111 544 4.03e-59 204
Msa1162980 AT5G16150.1 30.700 443 285 8 46 475 111 544 4.03e-59 204
Msa1162980 AT5G16150.3 30.700 443 285 8 46 475 111 544 4.03e-59 204
Msa1162980 AT3G03090.1 31.568 491 302 13 6 471 19 500 5.22e-58 199
Msa1162980 AT5G59250.1 32.117 411 247 10 88 473 153 556 4.40e-55 193
Msa1162980 AT2G43330.1 33.505 388 236 9 100 470 94 476 9.25e-55 191
Msa1162980 AT2G20780.1 28.294 463 313 9 23 470 39 497 1.59e-48 174
Msa1162980 AT2G20780.2 29.257 417 277 8 69 470 26 439 1.35e-47 171
Msa1162980 AT2G16120.1 28.132 455 281 12 52 470 42 486 1.15e-45 166
Msa1162980 AT1G67300.2 30.217 460 269 11 45 475 56 492 3.84e-45 165
Msa1162980 AT1G67300.1 30.283 459 269 11 45 475 56 491 4.27e-45 164
Msa1162980 AT1G67300.3 30.283 459 269 11 45 475 56 491 4.27e-45 164
Msa1162980 AT1G05030.2 29.877 405 261 7 84 475 73 467 4.46e-44 161
Msa1162980 AT1G05030.1 29.877 405 261 7 84 475 125 519 9.11e-44 161
Msa1162980 AT2G16130.1 27.727 440 276 11 68 471 54 487 1.48e-43 160
Msa1162980 AT1G79820.2 29.718 461 291 10 32 473 44 490 8.99e-43 158
Msa1162980 AT1G79820.1 29.718 461 291 10 32 473 44 490 8.99e-43 158
Msa1162980 AT1G67300.6 31.783 387 242 8 45 418 56 433 2.92e-42 156
Msa1162980 AT1G67300.7 31.783 387 242 8 45 418 56 433 2.92e-42 156
Msa1162980 AT3G18830.1 26.498 434 286 9 68 470 64 495 3.37e-42 157
Msa1162980 AT4G36670.1 28.070 456 281 9 54 471 31 477 5.74e-42 156
Msa1162980 AT2G18480.1 27.333 450 289 8 54 470 36 480 8.33e-42 156
Msa1162980 AT1G67300.4 32.011 378 235 8 45 409 56 424 6.20e-41 152
Msa1162980 AT1G67300.5 32.011 378 235 8 45 409 56 424 6.20e-41 152
Msa1162980 AT1G79820.4 30.769 403 251 8 32 418 44 434 3.65e-39 147
Msa1162980 AT1G50310.1 27.295 403 279 5 80 469 85 486 1.43e-37 144
Msa1162980 AT5G26340.1 26.044 407 286 5 80 473 84 488 2.39e-36 141
Msa1162980 AT3G19940.1 26.799 403 280 6 80 469 85 485 4.74e-36 140
Msa1162980 AT1G11260.1 26.988 415 266 8 80 469 83 485 2.62e-35 138
Msa1162980 AT4G21480.1 28.954 411 263 9 80 470 83 484 4.59e-35 137
Msa1162980 AT3G19930.1 27.123 424 289 6 61 470 67 484 6.82e-35 137
Msa1162980 AT3G19930.2 27.123 424 289 6 61 470 67 484 6.82e-35 137
Msa1162980 AT5G17010.2 26.899 487 250 14 16 471 26 437 1.37e-34 134
Msa1162980 AT5G23270.1 27.228 404 278 6 80 469 85 486 4.62e-34 134
Msa1162980 AT4G02050.2 26.980 404 272 10 82 469 88 484 6.62e-34 134
Msa1162980 AT4G02050.1 26.980 404 272 10 82 469 88 484 6.62e-34 134
Msa1162980 AT1G07340.1 29.584 409 260 10 80 469 82 481 7.48e-34 133
Msa1162980 AT3G05960.1 28.266 421 257 10 80 473 80 482 1.69e-33 132
Msa1162980 AT5G26250.1 27.873 409 274 9 80 473 81 483 4.51e-33 131
Msa1162980 AT1G50310.2 27.190 331 227 5 152 469 14 343 2.54e-32 127
Msa1162980 AT1G30220.1 29.930 284 183 7 102 370 93 375 6.50e-32 129
Msa1162980 AT1G30220.1 36.449 107 59 2 373 474 455 557 2.12e-14 75.9
Msa1162980 AT1G34580.2 27.792 403 276 7 82 469 35 437 4.17e-31 125
Msa1162980 AT1G34580.1 27.792 403 276 7 82 469 85 487 8.90e-31 125
Msa1162980 AT1G77210.2 25.768 423 288 8 69 469 67 485 1.18e-30 124
Msa1162980 AT1G77210.1 25.768 423 288 8 69 469 67 485 1.18e-30 124
Msa1162980 AT2G35740.1 26.159 302 185 5 84 358 73 363 1.02e-26 114
Msa1162980 AT2G35740.1 41.414 99 57 1 373 470 458 556 5.78e-15 77.8
Msa1162980 AT4G16480.2 26.715 277 183 5 100 358 90 364 1.29e-25 110
Msa1162980 AT4G16480.2 37.374 99 61 1 373 470 459 557 3.91e-14 75.1
Msa1162980 AT4G16480.3 26.715 277 183 5 100 358 90 364 1.29e-25 110
Msa1162980 AT4G16480.3 37.374 99 61 1 373 470 459 557 3.91e-14 75.1
Msa1162980 AT4G16480.1 26.715 277 183 5 100 358 90 364 1.29e-25 110
Msa1162980 AT4G16480.1 37.374 99 61 1 373 470 459 557 3.91e-14 75.1
Msa1162980 AT1G79820.3 26.464 461 258 11 32 473 44 442 1.15e-24 106
Msa1162980 AT5G61520.2 25.874 429 287 11 65 469 18 439 9.38e-24 103
Msa1162980 AT5G61520.1 25.874 429 287 11 65 469 66 487 1.20e-23 104
Msa1162980 AT1G20840.2 34.595 185 113 3 68 245 32 215 2.21e-23 104
Msa1162980 AT1G20840.2 31.250 208 126 3 274 467 509 713 3.49e-18 88.2
Msa1162980 AT1G20840.1 34.595 185 113 3 68 245 32 215 2.21e-23 104
Msa1162980 AT1G20840.1 31.250 208 126 3 274 467 509 713 3.49e-18 88.2
Msa1162980 AT1G77210.3 25.904 332 230 7 151 469 8 336 2.36e-23 101
Msa1162980 AT3G51490.1 36.585 164 96 4 89 245 55 217 7.04e-21 96.7
Msa1162980 AT3G51490.1 29.134 254 154 6 224 467 469 706 5.45e-17 84.3
Msa1162980 AT3G51490.3 36.585 164 96 4 89 245 5 167 7.11e-21 96.3
Msa1162980 AT3G51490.3 28.185 259 158 6 224 467 419 664 5.37e-19 90.5
Msa1162980 AT3G51490.2 36.585 164 96 4 89 245 55 217 7.49e-21 96.3
Msa1162980 AT3G51490.2 28.185 259 158 6 224 467 469 714 5.63e-19 90.5
Msa1162980 AT4G35300.5 31.019 216 132 5 266 467 311 523 5.86e-19 90.1
Msa1162980 AT4G35300.9 31.019 216 132 5 266 467 498 710 1.01e-18 89.7
Msa1162980 AT4G35300.9 36.170 188 108 6 68 245 32 217 1.20e-18 89.7
Msa1162980 AT4G35300.2 31.019 216 132 5 266 467 498 710 1.01e-18 89.7
Msa1162980 AT4G35300.2 36.170 188 108 6 68 245 32 217 1.20e-18 89.7
Msa1162980 AT4G35300.3 31.019 216 132 5 266 467 498 710 1.01e-18 89.7
Msa1162980 AT4G35300.3 36.170 188 108 6 68 245 32 217 1.20e-18 89.7
Msa1162980 AT4G35300.4 31.019 216 132 5 266 467 508 720 1.24e-18 89.4
Msa1162980 AT4G35300.4 36.170 188 108 6 68 245 32 217 1.45e-18 89.4
Msa1162980 AT4G35300.8 31.019 216 132 5 266 467 508 720 1.24e-18 89.4
Msa1162980 AT4G35300.8 36.170 188 108 6 68 245 32 217 1.45e-18 89.4
Msa1162980 AT4G35300.6 31.019 216 132 5 266 467 508 720 1.24e-18 89.4
Msa1162980 AT4G35300.6 36.170 188 108 6 68 245 32 217 1.45e-18 89.4
Msa1162980 AT4G35300.11 31.019 216 132 5 266 467 508 720 1.24e-18 89.4
Msa1162980 AT4G35300.11 36.170 188 108 6 68 245 32 217 1.45e-18 89.4
Msa1162980 AT4G35300.1 31.019 216 132 5 266 467 508 720 1.24e-18 89.4
Msa1162980 AT4G35300.1 36.170 188 108 6 68 245 32 217 1.45e-18 89.4
Msa1162980 AT4G35300.10 31.019 216 132 5 266 467 508 720 1.24e-18 89.4
Msa1162980 AT4G35300.10 36.170 188 108 6 68 245 32 217 1.45e-18 89.4
Msa1162980 AT4G35300.7 31.019 216 132 5 266 467 508 720 1.24e-18 89.4
Msa1162980 AT4G35300.7 36.170 188 108 6 68 245 32 217 1.45e-18 89.4
Msa1162980 AT1G54730.1 59.677 62 25 0 91 152 1 62 1.81e-17 77.0

Find 144 sgRNAs with CRISPR-Local

Find 276 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCCACTGCTGTGTTGCTTC+TGG 0.130660 7_4:+54006633 Msa1162980:CDS
CTTATGGTTTGCCAGCAATT+AGG 0.210158 7_4:+54007298 Msa1162980:CDS
GATATTTCCAGTCAATATTA+AGG 0.214954 7_4:+54008482 Msa1162980:intron
CTTGGTTTCGATTAGGTATC+TGG 0.222577 7_4:+54007829 Msa1162980:intron
GCAAACTTCCTATGCGTTAA+TGG 0.222951 7_4:-54008845 None:intergenic
GTTTGTGGTTCTTATGAATT+TGG 0.236732 7_4:+54005221 Msa1162980:CDS
TTATGGTTTGCCAGCAATTA+GGG 0.246534 7_4:+54007299 Msa1162980:CDS
GTTAAGGCATTATACTATTA+AGG 0.260116 7_4:-54009060 None:intergenic
AGGGCACCTCGGAGTTCTTT+TGG 0.268637 7_4:-54006277 None:intergenic
GGTCCAGTGCCTTTGGATAT+TGG 0.272502 7_4:+54006092 Msa1162980:CDS
GTGTAGTGTTTGGTGGAAAT+TGG 0.274589 7_4:+54008873 Msa1162980:three_prime_UTR
CCCACTGCTGTGTTGCTTCT+GGG 0.289747 7_4:+54006634 Msa1162980:CDS
GTCCAGTGCCTTTGGATATT+GGG 0.296992 7_4:+54006093 Msa1162980:CDS
CCACTTTGGTCCTTTACATT+AGG 0.299777 7_4:-54009097 None:intergenic
GCAACACAGCAGTGGGAATA+AGG 0.301338 7_4:-54006627 None:intergenic
GTATCAGTGTCATTCATAAT+TGG 0.311203 7_4:+54006445 Msa1162980:CDS
TAAAAGCCTTGAACAATTAC+AGG 0.318980 7_4:+54008819 Msa1162980:CDS
TTTGGCTCCATCTTGACATT+TGG 0.325417 7_4:+54005751 Msa1162980:CDS
TTTATAGGGTCCAGTGCCTT+TGG 0.327122 7_4:+54006085 Msa1162980:intron
TTACCAAAAGTAGGGGCTTC+CGG 0.327819 7_4:-54007730 None:intergenic
GAAGGATCTTAGTCTGTCTT+TGG 0.336829 7_4:+54005457 Msa1162980:CDS
CTCCAACTCAAGAAGCTATT+AGG 0.337233 7_4:+54005435 Msa1162980:CDS
AGGCCGGAAGCCCCTACTTT+TGG 0.343569 7_4:+54007727 Msa1162980:CDS
GTCCCAGCACTTGCCGTAAT+CGG 0.344026 7_4:+54008011 Msa1162980:CDS
ACCACATTCATTGCAGTTTG+TGG 0.345828 7_4:+54005206 Msa1162980:CDS
CCCCTTTCTTCCAACGAAAT+CGG 0.361829 7_4:-54005809 None:intergenic
TAATTGGAACAGTACTTTCA+TGG 0.363139 7_4:+54006461 Msa1162980:CDS
GGAATAAGAGAACCATTGAT+AGG 0.364113 7_4:+54005119 Msa1162980:CDS
GTAGATTGGAGTAGGGCTTA+TGG 0.368425 7_4:+54007282 Msa1162980:intron
GGGAGACTAGCAACAGGATA+TGG 0.368465 7_4:+54006113 Msa1162980:CDS
TGAAGAGGCAGAAGAAATTC+AGG 0.379612 7_4:+54006864 Msa1162980:CDS
GCCGATTTCGTTGGAAGAAA+GGG 0.384009 7_4:+54005808 Msa1162980:CDS
ACTTGCCGTAATCGGCATAT+TGG 0.388619 7_4:+54008019 Msa1162980:CDS
TGGCTGCCTGTAATTGTTCA+AGG 0.392084 7_4:-54008825 None:intergenic
TTCGATTAGGTATCTGGATC+AGG 0.394903 7_4:+54007835 Msa1162980:intron
TATAATATACGCTATCCTTC+AGG 0.395137 7_4:+54007574 Msa1162980:CDS
CTTCCAACGAAATCGGCAAT+AGG 0.397086 7_4:-54005802 None:intergenic
ATACCTGATTTAAGGTAGTC+AGG 0.404425 7_4:-54006297 None:intergenic
CTCATGAGTTGGAGCTCCTA+TGG 0.410624 7_4:+54008576 Msa1162980:CDS
TAAATGCAGTACTCCTTGTT+TGG 0.414418 7_4:+54005733 Msa1162980:intron
TTATTACTTACCAGCCATCT+AGG 0.415487 7_4:-54006679 None:intergenic
TTCCTAATAGCTTCTTGAGT+TGG 0.419270 7_4:-54005437 None:intergenic
TGGAGGGCTTTAGCTATAAT+CGG 0.425528 7_4:+54006481 Msa1162980:CDS
CCATACCAATATGCCGATTA+CGG 0.426709 7_4:-54008024 None:intergenic
TGCCCTGACTACCTTAAATC+AGG 0.427867 7_4:+54006294 Msa1162980:CDS
GGATGAATGTATTAGAGTTA+AGG 0.432104 7_4:-54009076 None:intergenic
TGAAACAAATCCAGCACCTT+CGG 0.432421 7_4:-54007037 None:intergenic
TCATTCCAGAGTCTCCTAGA+TGG 0.435503 7_4:+54006665 Msa1162980:CDS
CTTTCAACTTTCTCATGAGT+TGG 0.435734 7_4:+54008565 Msa1162980:CDS
CTTTAAATTTACCAAAAGTA+GGG 0.436278 7_4:-54007738 None:intergenic
TCTGGATCAGGATTGGTTGC+AGG 0.437259 7_4:+54007847 Msa1162980:CDS
GCATAGCAACATTAGTGAAC+TGG 0.437404 7_4:+54008517 Msa1162980:CDS
TGCCGATTTCGTTGGAAGAA+AGG 0.437883 7_4:+54005807 Msa1162980:CDS
ATGCCGATTACGGCAAGTGC+TGG 0.438063 7_4:-54008014 None:intergenic
CTTCATGAGTAGATTGGAGT+AGG 0.442194 7_4:+54007274 Msa1162980:intron
GATTGTGACTGTGTCTGTAT+AGG 0.442312 7_4:-54004998 None:intergenic
ATATTTCCAGTCAATATTAA+GGG 0.442648 7_4:+54008483 Msa1162980:CDS
GTCAATATTAAGGGGCAGGC+AGG 0.454849 7_4:+54008492 Msa1162980:CDS
GCTTTAAATTTACCAAAAGT+AGG 0.457971 7_4:-54007739 None:intergenic
ACAAATTATAATCAAAATCA+TGG 0.458705 7_4:-54008990 None:intergenic
ATAGGATTTCCTTCTGCGAC+GGG 0.459192 7_4:+54007548 Msa1162980:intron
GCAACATTAGTGAACTGGTT+TGG 0.459624 7_4:+54008522 Msa1162980:CDS
TTGACATTTGGTGCGATGAT+TGG 0.460714 7_4:+54005763 Msa1162980:CDS
TCCGGCCTGCTCTATCTATG+AGG 0.461836 7_4:-54007712 None:intergenic
CATGAGAAAGTTGAAAGTAT+AGG 0.464787 7_4:-54008559 None:intergenic
TTTGCGATTTGTGTAGTGTT+TGG 0.466010 7_4:+54008863 Msa1162980:three_prime_UTR
TCCAGTCAATATTAAGGGGC+AGG 0.473585 7_4:+54008488 Msa1162980:CDS
GCTCGCAAAACCGAAGGTGC+TGG 0.477284 7_4:+54007027 Msa1162980:CDS
CTAGCAACAGGATATGGAAT+GGG 0.490163 7_4:+54006119 Msa1162980:CDS
GAATAAGAGAACCATTGATA+GGG 0.493005 7_4:+54005120 Msa1162980:CDS
GCCTGCCCCTTAATATTGAC+TGG 0.493013 7_4:-54008489 None:intergenic
GATGGATATCAAAGAGGATG+TGG 0.494729 7_4:+54005079 Msa1162980:exon
GCGATTTGTGTAGTGTTTGG+TGG 0.502161 7_4:+54008866 Msa1162980:three_prime_UTR
ATACATTCATCCTAATGTAA+AGG 0.510639 7_4:+54009087 Msa1162980:three_prime_UTR
GATATTGGGAGACTAGCAAC+AGG 0.513165 7_4:+54006107 Msa1162980:CDS
ACACAGGTTAAGAGTGAAGA+TGG 0.518102 7_4:+54005061 Msa1162980:exon
ACAGGTTCATGAAGTGGCTG+TGG 0.519075 7_4:+54007983 Msa1162980:intron
TCCAGAGTCTCCTAGATGGC+TGG 0.523060 7_4:+54006669 Msa1162980:CDS
CAGATTGTGATCACAGGTGT+TGG 0.523824 7_4:+54007683 Msa1162980:intron
TTAGGTATCTGGATCAGGAT+TGG 0.526007 7_4:+54007840 Msa1162980:intron
TGCCGATTACGGCAAGTGCT+GGG 0.527544 7_4:-54008013 None:intergenic
TCTTAGTCTGTCTTTGGCAG+AGG 0.528107 7_4:+54005463 Msa1162980:CDS
TAGGAATGGGAGCAATTCCA+TGG 0.529632 7_4:+54008159 Msa1162980:CDS
TGGAACAGTACTTTCATGGA+GGG 0.532101 7_4:+54006465 Msa1162980:CDS
GGACCTATTGCCGATTTCGT+TGG 0.533309 7_4:+54005799 Msa1162980:CDS
TTCATGAGTAGATTGGAGTA+GGG 0.538540 7_4:+54007275 Msa1162980:intron
ACCAGCCATCTAGGAGACTC+TGG 0.543206 7_4:-54006670 None:intergenic
CATAGGATTTCCTTCTGCGA+CGG 0.543429 7_4:+54007547 Msa1162980:intron
CTCCCAATATCCAAAGGCAC+TGG 0.543712 7_4:-54006095 None:intergenic
GATGATGATCTTTGCTTGCA+TGG 0.548086 7_4:-54005163 None:intergenic
CCGGCCTGCTCTATCTATGA+GGG 0.555047 7_4:-54007711 None:intergenic
TAGTGAACTGGTTTGGTGCA+TGG 0.558886 7_4:+54008529 Msa1162980:CDS
ACCTCGGACATCACAACCCA+TGG 0.560460 7_4:-54008176 None:intergenic
GCAAAGATCATCATCATCCA+TGG 0.563043 7_4:+54005171 Msa1162980:CDS
TACCTGATTTAAGGTAGTCA+GGG 0.563340 7_4:-54006296 None:intergenic
TTTAAATTTACCAAAAGTAG+GGG 0.564761 7_4:-54007737 None:intergenic
ATTATACTCCCCGTCGCAGA+AGG 0.566503 7_4:-54007557 None:intergenic
GTGGAAGGTGGCAAGCAGAA+AGG 0.567824 7_4:+54005098 Msa1162980:CDS
AGCAGTTGCATTCTATCTCA+AGG 0.573615 7_4:+54007882 Msa1162980:CDS
AGATGCTGATATATCTGAAG+AGG 0.576120 7_4:+54006849 Msa1162980:CDS
ACCCAGAAGCAACACAGCAG+TGG 0.576369 7_4:-54006635 None:intergenic
CCCAGAAGCAACACAGCAGT+GGG 0.578353 7_4:-54006634 None:intergenic
CCGATTTCGTTGGAAGAAAG+GGG 0.579659 7_4:+54005809 Msa1162980:CDS
CATCGCACCAAATGTCAAGA+TGG 0.580805 7_4:-54005758 None:intergenic
GCAATTTCTGCTACGAACAC+AGG 0.587269 7_4:-54006253 None:intergenic
TATTTCCAGTCAATATTAAG+GGG 0.587860 7_4:+54008484 Msa1162980:CDS
GCAGCCCTCATAGATAGAGC+AGG 0.590573 7_4:+54007707 Msa1162980:CDS
AACTCAAGAAGCTATTAGGA+AGG 0.591182 7_4:+54005439 Msa1162980:CDS
GTGGTGAAGTAAACCATCCA+TGG 0.596687 7_4:-54005188 None:intergenic
CAGGTTCATGAAGTGGCTGT+GGG 0.601363 7_4:+54007984 Msa1162980:intron
AGTGAAGATGGATATCAAAG+AGG 0.602887 7_4:+54005073 Msa1162980:exon
ACTAGCAACAGGATATGGAA+TGG 0.604090 7_4:+54006118 Msa1162980:CDS
GGTGGAAATTGGAACAACAA+AGG 0.604202 7_4:+54008884 Msa1162980:three_prime_UTR
ATGGTTTGCCAGCAATTAGG+GGG 0.608563 7_4:+54007301 Msa1162980:CDS
AGATCATCATCATCCATGGA+TGG 0.612235 7_4:+54005175 Msa1162980:CDS
TGCTGATATTAGGTCTACAT+AGG 0.612667 7_4:+54008125 Msa1162980:intron
ACAGGCAGCCATTAACGCAT+AGG 0.614514 7_4:+54008837 Msa1162980:CDS
CGATTTCGTTGGAAGAAAGG+GGG 0.616666 7_4:+54005810 Msa1162980:CDS
TAGCAACAGGATATGGAATG+GGG 0.617086 7_4:+54006120 Msa1162980:CDS
AATAAGAGAACCATTGATAG+GGG 0.617887 7_4:+54005121 Msa1162980:CDS
CCCTCATAGATAGAGCAGGC+CGG 0.622479 7_4:+54007711 Msa1162980:CDS
TAATGAATGCAGGCAAAGCG+AGG 0.623838 7_4:+54006781 Msa1162980:intron
ATCAAAGAGGATGTGGAAGG+TGG 0.623969 7_4:+54005086 Msa1162980:CDS
AAGATATTTACGCTCACTCA+CGG 0.630277 7_4:+54007063 Msa1162980:CDS
TGTCAAGATGGAGCCAAACA+AGG 0.632848 7_4:-54005746 None:intergenic
TATGGTTTGCCAGCAATTAG+GGG 0.634878 7_4:+54007300 Msa1162980:CDS
AGAACAGCTCGCAAAACCGA+AGG 0.635960 7_4:+54007021 Msa1162980:CDS
CAAGTAACAGGTTCATGAAG+TGG 0.649184 7_4:+54007977 Msa1162980:intron
GCAGCATTACAAATACTTCG+CGG 0.650248 7_4:+54006823 Msa1162980:CDS
GCTAGTCTCCCAATATCCAA+AGG 0.651923 7_4:-54006101 None:intergenic
GATATCAAAGAGGATGTGGA+AGG 0.653697 7_4:+54005083 Msa1162980:CDS
GTAGTAGTCCCAGAAACCAA+AGG 0.657750 7_4:+54008796 Msa1162980:CDS
TTGGAACAGTACTTTCATGG+AGG 0.660408 7_4:+54006464 Msa1162980:CDS
TAGGATTTCCTTCTGCGACG+GGG 0.661364 7_4:+54007549 Msa1162980:intron
CTAAAAGATTGTACACACAC+AGG 0.667401 7_4:+54005045 Msa1162980:five_prime_UTR
TTAAGGTAGTCAGGGCACCT+CGG 0.669152 7_4:-54006288 None:intergenic
CATAGTCATCAATACTACCA+AGG 0.669569 7_4:+54005020 Msa1162980:five_prime_UTR
ATGATTGGTGCAATAACAAG+TGG 0.674569 7_4:+54005778 Msa1162980:CDS
AGGAATGGGAGCAATTCCAT+GGG 0.675398 7_4:+54008160 Msa1162980:CDS
ACCACAAACTGCAATGAATG+TGG 0.678039 7_4:-54005207 None:intergenic
AGCAACAGGATATGGAATGG+GGG 0.687431 7_4:+54006121 Msa1162980:CDS
GATTGCAGCGTAAAGAACGA+AGG 0.710685 7_4:-54008746 None:intergenic
TCCATGGGTTGTGATGTCCG+AGG 0.731376 7_4:+54008175 Msa1162980:CDS
ATTGCGCCAAAAGAACTCCG+AGG 0.763517 7_4:+54006271 Msa1162980:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAAGATAATTAACAATT+TGG - chr7_4:54005877-54005896 None:intergenic 10.0%
!!! ATCAATTTTACATAAATATT+AGG - chr7_4:54007948-54007967 None:intergenic 10.0%
!!! ATTTTGATTATAATTTGTAT+TGG + chr7_4:54008995-54009014 Msa1162980:three_prime_UTR 10.0%
!! GATTAGATTAATCAAAATAT+AGG + chr7_4:54005532-54005551 Msa1162980:intron 15.0%
!! TGTTAATTATCTTTATTATG+TGG + chr7_4:54005880-54005899 Msa1162980:intron 15.0%
!! GTTAATTATCTTTATTATGT+GGG + chr7_4:54005881-54005900 Msa1162980:intron 15.0%
!! TTAATTATCTTTATTATGTG+GGG + chr7_4:54005882-54005901 Msa1162980:intron 15.0%
!!! AAAAAAAATCACTTAAGTTT+TGG - chr7_4:54006017-54006036 None:intergenic 15.0%
!! AAAAAAGTTCAGATATTATT+TGG - chr7_4:54006058-54006077 None:intergenic 15.0%
!!! TTTATTTTGTTTTGGTTTAT+TGG + chr7_4:54007513-54007532 Msa1162980:intron 15.0%
!! TTAAATTAACCAATAATTCT+TGG + chr7_4:54007606-54007625 Msa1162980:intron 15.0%
!! TGATTATCATATAATAATTC+TGG - chr7_4:54008660-54008679 None:intergenic 15.0%
!!! TACTTTTATTTATGATTTTC+AGG + chr7_4:54008721-54008740 Msa1162980:intron 15.0%
!! ACAAATTATAATCAAAATCA+TGG - chr7_4:54008993-54009012 None:intergenic 15.0%
!!! TGTTGTTATTTTGTTTTTTC+AGG + chr7_4:54005400-54005419 Msa1162980:intron 20.0%
!!! TTTTGATTAATCTAATCCTA+AGG - chr7_4:54005529-54005548 None:intergenic 20.0%
!!! GAAAATGATGTTAGATATTT+TGG + chr7_4:54005842-54005861 Msa1162980:intron 20.0%
!!! TATCCATAAAAAGTTTGTTT+TGG + chr7_4:54005905-54005924 Msa1162980:intron 20.0%
!!! ATTCCAAAACAAACTTTTTA+TGG - chr7_4:54005911-54005930 None:intergenic 20.0%
!!! TATTATTTGGAGTATCATTA+TGG - chr7_4:54006045-54006064 None:intergenic 20.0%
!! TTTGATGTGTTACATATATA+AGG + chr7_4:54006228-54006247 Msa1162980:intron 20.0%
!! AGAAAAATATACCTGATTTA+AGG - chr7_4:54006308-54006327 None:intergenic 20.0%
!!! CTCAGATTTTTATTTTGTTT+TGG + chr7_4:54007505-54007524 Msa1162980:intron 20.0%
!! ATTTAAAAATAAGAACCTGA+AGG - chr7_4:54007592-54007611 None:intergenic 20.0%
!! ATCTGTGAAAATAAAAATCA+TGG - chr7_4:54007668-54007687 None:intergenic 20.0%
!! TTTAAATTTACCAAAAGTAG+GGG - chr7_4:54007740-54007759 None:intergenic 20.0%
!! CTTTAAATTTACCAAAAGTA+GGG - chr7_4:54007741-54007760 None:intergenic 20.0%
!!! ATACTCTTATTGTTATTTCT+TGG + chr7_4:54007811-54007830 Msa1162980:intron 20.0%
!! TGATATTAAAAACTGAAAGT+GGG - chr7_4:54008218-54008237 None:intergenic 20.0%
!! TTGATATTAAAAACTGAAAG+TGG - chr7_4:54008219-54008238 None:intergenic 20.0%
!! ATATTTCCAGTCAATATTAA+GGG + chr7_4:54008483-54008502 Msa1162980:CDS 20.0%
!! AATGTATTAGTATTTACCAT+AGG - chr7_4:54008595-54008614 None:intergenic 20.0%
! TATAGGAAATAGACTGAAAA+TGG + chr7_4:54005549-54005568 Msa1162980:intron 25.0%
! GAAATACAAACAATGTTTAG+AGG + chr7_4:54005620-54005639 Msa1162980:intron 25.0%
!!! TTGTTTTGGAATATATATGC+AGG + chr7_4:54005919-54005938 Msa1162980:intron 25.0%
!!! ACTTTTTTCTTCCCTTTTAT+AGG + chr7_4:54006070-54006089 Msa1162980:intron 25.0%
!!! CTTTTTTCTTCCCTTTTATA+GGG + chr7_4:54006071-54006090 Msa1162980:intron 25.0%
! CAGCTTAATTGCATTATATT+TGG - chr7_4:54006961-54006980 None:intergenic 25.0%
! CAAATATAATGCAATTAAGC+TGG + chr7_4:54006959-54006978 Msa1162980:intron 25.0%
!!! AAAGTATTGGTTGAATATGA+TGG + chr7_4:54007171-54007190 Msa1162980:intron 25.0%
!! AGGAAGATGAAAATTTTGAA+TGG - chr7_4:54007248-54007267 None:intergenic 25.0%
! ATCTACTCATGAAGAAAAAT+AGG - chr7_4:54007268-54007287 None:intergenic 25.0%
!! ATTTTTCTTCATGAGTAGAT+TGG + chr7_4:54007268-54007287 Msa1162980:intron 25.0%
!!! TATTGGTGTATTTTTGTCAT+AGG + chr7_4:54007530-54007549 Msa1162980:intron 25.0%
!! TCAGATTTTCCAAGAATTAT+TGG - chr7_4:54007618-54007637 None:intergenic 25.0%
! AATAAAAATCATGGTTGAGT+TGG - chr7_4:54007659-54007678 None:intergenic 25.0%
!! GCTTTAAATTTACCAAAAGT+AGG - chr7_4:54007742-54007761 None:intergenic 25.0%
! GATATTAAAAACTGAAAGTG+GGG - chr7_4:54008217-54008236 None:intergenic 25.0%
! GATATTTCCAGTCAATATTA+AGG + chr7_4:54008482-54008501 Msa1162980:intron 25.0%
! TATTTCCAGTCAATATTAAG+GGG + chr7_4:54008484-54008503 Msa1162980:CDS 25.0%
!! ATTGGTTTCTTGAACTAAAT+GGG - chr7_4:54008687-54008706 None:intergenic 25.0%
!!! TATTGGTTTCTTGAACTAAA+TGG - chr7_4:54008688-54008707 None:intergenic 25.0%
!! GTTAAGGCATTATACTATTA+AGG - chr7_4:54009063-54009082 None:intergenic 25.0%
!!! TGTACAATCTTTTAGTTCCT+TGG - chr7_4:54005040-54005059 None:intergenic 30.0%
GAATAAGAGAACCATTGATA+GGG + chr7_4:54005120-54005139 Msa1162980:CDS 30.0%
AATAAGAGAACCATTGATAG+GGG + chr7_4:54005121-54005140 Msa1162980:CDS 30.0%
GTTTGTGGTTCTTATGAATT+TGG + chr7_4:54005221-54005240 Msa1162980:CDS 30.0%
!! GCACTGTTTTAGATGAAAAT+CGG + chr7_4:54005287-54005306 Msa1162980:intron 30.0%
! GTATGTGTTTAATTTCTCTG+TGG + chr7_4:54005374-54005393 Msa1162980:intron 30.0%
!!! GTTATTTTGTTTTTTCAGGC+TGG + chr7_4:54005404-54005423 Msa1162980:intron 30.0%
GATTTAATTGCATGTACCTT+AGG + chr7_4:54005510-54005529 Msa1162980:intron 30.0%
GTAATTATACAGTTGAACCT+TGG + chr7_4:54005571-54005590 Msa1162980:intron 30.0%
! GTAATTTTCTTTGCCTTTTG+CGG + chr7_4:54005704-54005723 Msa1162980:intron 30.0%
!!! GCTTGTTATTTACTTTTCTG+AGG + chr7_4:54005979-54005998 Msa1162980:CDS 30.0%
! TATTTGGAGTATCATTATGG+CGG - chr7_4:54006042-54006061 None:intergenic 30.0%
! GTATCAGTGTCATTCATAAT+TGG + chr7_4:54006445-54006464 Msa1162980:CDS 30.0%
TAATTGGAACAGTACTTTCA+TGG + chr7_4:54006461-54006480 Msa1162980:CDS 30.0%
TCATATGATCTTCTTCTTAG+TGG - chr7_4:54006537-54006556 None:intergenic 30.0%
ATTTAGATGAAAACATGCAG+TGG + chr7_4:54006718-54006737 Msa1162980:intron 30.0%
! TTCATTATTTGGTTGGTACT+TGG - chr7_4:54006768-54006787 None:intergenic 30.0%
ACTAGTTATATAATCCTGTG+TGG - chr7_4:54006999-54007018 None:intergenic 30.0%
AAATGAACTGATATTCAGAG+TGG - chr7_4:54007104-54007123 None:intergenic 30.0%
! ATTTTCTTCAAGAATGTGTG+TGG + chr7_4:54007120-54007139 Msa1162980:intron 30.0%
AGAGGTGGAAAATAAAGTAT+TGG + chr7_4:54007158-54007177 Msa1162980:intron 30.0%
TGCTAGATCAAAAATACTAC+TGG - chr7_4:54007350-54007369 None:intergenic 30.0%
!! AGTAGTATTTTTGATCTAGC+AGG + chr7_4:54007349-54007368 Msa1162980:CDS 30.0%
! AAGTATGATGGTGTTAAACT+TGG - chr7_4:54007405-54007424 None:intergenic 30.0%
! TGATATGCAAGAAAGTATGA+TGG - chr7_4:54007417-54007436 None:intergenic 30.0%
TATAATATACGCTATCCTTC+AGG + chr7_4:54007574-54007593 Msa1162980:CDS 30.0%
!! TAAGAGTATCATACATGAAG+TGG - chr7_4:54007800-54007819 None:intergenic 30.0%
!! GTTATTTCTTGGTTTCGATT+AGG + chr7_4:54007822-54007841 Msa1162980:intron 30.0%
AAGCTGTAAAGTTCTTAGTT+GGG - chr7_4:54007913-54007932 None:intergenic 30.0%
! TACATAGGATCGTTTTCAAT+AGG + chr7_4:54008140-54008159 Msa1162980:CDS 30.0%
!! TCTTAAGTGCAACTTGTTTT+AGG - chr7_4:54008291-54008310 None:intergenic 30.0%
AAAAGAAAAACAGTTCCAGT+CGG - chr7_4:54008333-54008352 None:intergenic 30.0%
! GTTTTTCTTTTTCTTTGACC+TGG + chr7_4:54008342-54008361 Msa1162980:intron 30.0%
! CATGAGAAAGTTGAAAGTAT+AGG - chr7_4:54008562-54008581 None:intergenic 30.0%
AGTAAACTTGCATGTTCTAT+TGG - chr7_4:54008705-54008724 None:intergenic 30.0%
TAAAAGCCTTGAACAATTAC+AGG + chr7_4:54008819-54008838 Msa1162980:CDS 30.0%
CCAACAGACTATAAAAAACA+AGG - chr7_4:54008941-54008960 None:intergenic 30.0%
!!! CCTTGTTTTTTATAGTCTGT+TGG + chr7_4:54008938-54008957 Msa1162980:three_prime_UTR 30.0%
GGATGAATGTATTAGAGTTA+AGG - chr7_4:54009079-54009098 None:intergenic 30.0%
CATAGTCATCAATACTACCA+AGG + chr7_4:54005020-54005039 Msa1162980:five_prime_UTR 35.0%
CTAAAAGATTGTACACACAC+AGG + chr7_4:54005045-54005064 Msa1162980:five_prime_UTR 35.0%
AGTGAAGATGGATATCAAAG+AGG + chr7_4:54005073-54005092 Msa1162980:exon 35.0%
GGAATAAGAGAACCATTGAT+AGG + chr7_4:54005119-54005138 Msa1162980:CDS 35.0%
!! TTGTTTTGTTCCCCTATCAA+TGG - chr7_4:54005134-54005153 None:intergenic 35.0%
CTAAAAGATGCTTGATTGCT+TGG + chr7_4:54005322-54005341 Msa1162980:intron 35.0%
TTCCTAATAGCTTCTTGAGT+TGG - chr7_4:54005440-54005459 None:intergenic 35.0%
AACTCAAGAAGCTATTAGGA+AGG + chr7_4:54005439-54005458 Msa1162980:CDS 35.0%
ATTGATTATACTAGCAGCCA+AGG - chr7_4:54005591-54005610 None:intergenic 35.0%
TAAATGCAGTACTCCTTGTT+TGG + chr7_4:54005733-54005752 Msa1162980:intron 35.0%
ATGATTGGTGCAATAACAAG+TGG + chr7_4:54005778-54005797 Msa1162980:CDS 35.0%
!! TCAAGTGCTTTTTGTATTGC+AGG + chr7_4:54005953-54005972 Msa1162980:CDS 35.0%
!! CAAGTGCTTTTTGTATTGCA+GGG + chr7_4:54005954-54005973 Msa1162980:CDS 35.0%
!!! AATGGGGGTTTTTTCATTTG+TGG + chr7_4:54006136-54006155 Msa1162980:CDS 35.0%
! TACCTGATTTAAGGTAGTCA+GGG - chr7_4:54006299-54006318 None:intergenic 35.0%
! ATACCTGATTTAAGGTAGTC+AGG - chr7_4:54006300-54006319 None:intergenic 35.0%
AAGTAAGTGTTTGCAATTGC+AGG + chr7_4:54006604-54006623 Msa1162980:intron 35.0%
TTATTACTTACCAGCCATCT+AGG - chr7_4:54006682-54006701 None:intergenic 35.0%
ACCAACCAAATAATGAATGC+AGG + chr7_4:54006771-54006790 Msa1162980:intron 35.0%
CTTTGCCTGCATTCATTATT+TGG - chr7_4:54006779-54006798 None:intergenic 35.0%
AGATGCTGATATATCTGAAG+AGG + chr7_4:54006849-54006868 Msa1162980:CDS 35.0%
GTCTTTATTATTGTGCCTGA+AGG - chr7_4:54006932-54006951 None:intergenic 35.0%
AAGATATTTACGCTCACTCA+CGG + chr7_4:54007063-54007082 Msa1162980:CDS 35.0%
TTCATGAGTAGATTGGAGTA+GGG + chr7_4:54007275-54007294 Msa1162980:intron 35.0%
! TTATGGTTTGCCAGCAATTA+GGG + chr7_4:54007299-54007318 Msa1162980:CDS 35.0%
!! AATCATGGTTGAGTTGGATT+CGG - chr7_4:54007653-54007672 None:intergenic 35.0%
! TTTTCACAGATTGTGATCAC+AGG + chr7_4:54007677-54007696 Msa1162980:intron 35.0%
GAAGCTGTAAAGTTCTTAGT+TGG - chr7_4:54007914-54007933 None:intergenic 35.0%
CTCTTTCTACTGCTGATATT+AGG + chr7_4:54008115-54008134 Msa1162980:intron 35.0%
TGCTGATATTAGGTCTACAT+AGG + chr7_4:54008125-54008144 Msa1162980:intron 35.0%
! AGGATCGTTTTCAATAGGAA+TGG + chr7_4:54008145-54008164 Msa1162980:CDS 35.0%
! GGATCGTTTTCAATAGGAAT+GGG + chr7_4:54008146-54008165 Msa1162980:CDS 35.0%
TAAAAACTGAAAGTGGGGAA+AGG - chr7_4:54008212-54008231 None:intergenic 35.0%
AAAGAAAAACAGTTCCAGTC+GGG - chr7_4:54008332-54008351 None:intergenic 35.0%
TAAATCAACTTCGAATTCGC+CGG + chr7_4:54008394-54008413 Msa1162980:intron 35.0%
! AAGAGGACACATTTTGTAAC+CGG - chr7_4:54008416-54008435 None:intergenic 35.0%
GTGTCCTCTTAGTAAAAAGA+CGG + chr7_4:54008426-54008445 Msa1162980:intron 35.0%
! TATGCCGTCTTTTTACTAAG+AGG - chr7_4:54008433-54008452 None:intergenic 35.0%
CTTTCAACTTTCTCATGAGT+TGG + chr7_4:54008565-54008584 Msa1162980:CDS 35.0%
! TTGTTCAAGGCTTTTACCTT+TGG - chr7_4:54008815-54008834 None:intergenic 35.0%
TTTGCGATTTGTGTAGTGTT+TGG + chr7_4:54008863-54008882 Msa1162980:three_prime_UTR 35.0%
GATTGTGACTGTGTCTGTAT+AGG - chr7_4:54005001-54005020 None:intergenic 40.0%
ACACAGGTTAAGAGTGAAGA+TGG + chr7_4:54005061-54005080 Msa1162980:exon 40.0%
GATGGATATCAAAGAGGATG+TGG + chr7_4:54005079-54005098 Msa1162980:exon 40.0%
GATATCAAAGAGGATGTGGA+AGG + chr7_4:54005083-54005102 Msa1162980:CDS 40.0%
GATGATGATCTTTGCTTGCA+TGG - chr7_4:54005166-54005185 None:intergenic 40.0%
GCAAAGATCATCATCATCCA+TGG + chr7_4:54005171-54005190 Msa1162980:CDS 40.0%
AGATCATCATCATCCATGGA+TGG + chr7_4:54005175-54005194 Msa1162980:CDS 40.0%
ACCACATTCATTGCAGTTTG+TGG + chr7_4:54005206-54005225 Msa1162980:CDS 40.0%
ACCACAAACTGCAATGAATG+TGG - chr7_4:54005210-54005229 None:intergenic 40.0%
CTCCAACTCAAGAAGCTATT+AGG + chr7_4:54005435-54005454 Msa1162980:CDS 40.0%
GAAGGATCTTAGTCTGTCTT+TGG + chr7_4:54005457-54005476 Msa1162980:CDS 40.0%
GCATTTAGTCAATCCGCAAA+AGG - chr7_4:54005720-54005739 None:intergenic 40.0%
! TTTGGCTCCATCTTGACATT+TGG + chr7_4:54005751-54005770 Msa1162980:CDS 40.0%
!! TTGACATTTGGTGCGATGAT+TGG + chr7_4:54005763-54005782 Msa1162980:CDS 40.0%
ACTAGCAACAGGATATGGAA+TGG + chr7_4:54006118-54006137 Msa1162980:CDS 40.0%
CTAGCAACAGGATATGGAAT+GGG + chr7_4:54006119-54006138 Msa1162980:CDS 40.0%
TAGCAACAGGATATGGAATG+GGG + chr7_4:54006120-54006139 Msa1162980:CDS 40.0%
!!! GGGGTTTTTTCATTTGTGGT+TGG + chr7_4:54006140-54006159 Msa1162980:intron 40.0%
TTGGAACAGTACTTTCATGG+AGG + chr7_4:54006464-54006483 Msa1162980:CDS 40.0%
TGGAACAGTACTTTCATGGA+GGG + chr7_4:54006465-54006484 Msa1162980:CDS 40.0%
! TGGAGGGCTTTAGCTATAAT+CGG + chr7_4:54006481-54006500 Msa1162980:CDS 40.0%
GCCTGCATTCATTATTTGGT+TGG - chr7_4:54006775-54006794 None:intergenic 40.0%
GCAGCATTACAAATACTTCG+CGG + chr7_4:54006823-54006842 Msa1162980:CDS 40.0%
TGAAGAGGCAGAAGAAATTC+AGG + chr7_4:54006864-54006883 Msa1162980:CDS 40.0%
AGGTAACTGTGTGTTAGTGT+TGG + chr7_4:54006884-54006903 Msa1162980:intron 40.0%
TATTAAGTGACCTTGCCTTC+AGG + chr7_4:54006914-54006933 Msa1162980:intron 40.0%
TATTATTGTGCCTGAAGGCA+AGG - chr7_4:54006927-54006946 None:intergenic 40.0%
TGAAACAAATCCAGCACCTT+CGG - chr7_4:54007040-54007059 None:intergenic 40.0%
TTCTTCAAGAATGTGTGTGG+TGG + chr7_4:54007123-54007142 Msa1162980:intron 40.0%
CTTCATGAGTAGATTGGAGT+AGG + chr7_4:54007274-54007293 Msa1162980:intron 40.0%
! CTTATGGTTTGCCAGCAATT+AGG + chr7_4:54007298-54007317 Msa1162980:CDS 40.0%
! TATGGTTTGCCAGCAATTAG+GGG + chr7_4:54007300-54007319 Msa1162980:CDS 40.0%
!! ATCATGGTTGAGTTGGATTC+GGG - chr7_4:54007652-54007671 None:intergenic 40.0%
CTTGGTTTCGATTAGGTATC+TGG + chr7_4:54007829-54007848 Msa1162980:intron 40.0%
TTCGATTAGGTATCTGGATC+AGG + chr7_4:54007835-54007854 Msa1162980:intron 40.0%
TTAGGTATCTGGATCAGGAT+TGG + chr7_4:54007840-54007859 Msa1162980:intron 40.0%
AGCAGTTGCATTCTATCTCA+AGG + chr7_4:54007882-54007901 Msa1162980:CDS 40.0%
GATATCCTTGTGCAAGTAAC+AGG + chr7_4:54007965-54007984 Msa1162980:intron 40.0%
! ATGAACCTGTTACTTGCACA+AGG - chr7_4:54007973-54007992 None:intergenic 40.0%
CAAGTAACAGGTTCATGAAG+TGG + chr7_4:54007977-54007996 Msa1162980:intron 40.0%
! CCATACCAATATGCCGATTA+CGG - chr7_4:54008027-54008046 None:intergenic 40.0%
AAGAAAAACAGTTCCAGTCG+GGG - chr7_4:54008331-54008350 None:intergenic 40.0%
! TCTTTTTCTTTGACCTGGAG+AGG + chr7_4:54008347-54008366 Msa1162980:intron 40.0%
CTGGAAATATCTGCAGCATA+AGG - chr7_4:54008473-54008492 None:intergenic 40.0%
GCATAGCAACATTAGTGAAC+TGG + chr7_4:54008517-54008536 Msa1162980:CDS 40.0%
GCAACATTAGTGAACTGGTT+TGG + chr7_4:54008522-54008541 Msa1162980:CDS 40.0%
!! GGCTTTTACCTTTGGTTTCT+GGG - chr7_4:54008807-54008826 None:intergenic 40.0%
!! AGGCTTTTACCTTTGGTTTC+TGG - chr7_4:54008808-54008827 None:intergenic 40.0%
GCAAACTTCCTATGCGTTAA+TGG - chr7_4:54008848-54008867 None:intergenic 40.0%
! GTGTAGTGTTTGGTGGAAAT+TGG + chr7_4:54008873-54008892 Msa1162980:three_prime_UTR 40.0%
GGTGGAAATTGGAACAACAA+AGG + chr7_4:54008884-54008903 Msa1162980:three_prime_UTR 40.0%
ATCAAAGAGGATGTGGAAGG+TGG + chr7_4:54005086-54005105 Msa1162980:CDS 45.0%
GTGGTGAAGTAAACCATCCA+TGG - chr7_4:54005191-54005210 None:intergenic 45.0%
TCTTAGTCTGTCTTTGGCAG+AGG + chr7_4:54005463-54005482 Msa1162980:CDS 45.0%
TGTCAAGATGGAGCCAAACA+AGG - chr7_4:54005749-54005768 None:intergenic 45.0%
CATCGCACCAAATGTCAAGA+TGG - chr7_4:54005761-54005780 None:intergenic 45.0%
CTTCCAACGAAATCGGCAAT+AGG - chr7_4:54005805-54005824 None:intergenic 45.0%
!! TGCCGATTTCGTTGGAAGAA+AGG + chr7_4:54005807-54005826 Msa1162980:CDS 45.0%
! GCCGATTTCGTTGGAAGAAA+GGG + chr7_4:54005808-54005827 Msa1162980:CDS 45.0%
CCCCTTTCTTCCAACGAAAT+CGG - chr7_4:54005812-54005831 None:intergenic 45.0%
CCGATTTCGTTGGAAGAAAG+GGG + chr7_4:54005809-54005828 Msa1162980:CDS 45.0%
CGATTTCGTTGGAAGAAAGG+GGG + chr7_4:54005810-54005829 Msa1162980:CDS 45.0%
GGAAGAAAGGGGGTAATTTC+AGG + chr7_4:54005820-54005839 Msa1162980:intron 45.0%
!! GTGCTTTTTGTATTGCAGGG+TGG + chr7_4:54005957-54005976 Msa1162980:CDS 45.0%
!! AGGCACTGGACCCTATAAAA+GGG - chr7_4:54006084-54006103 None:intergenic 45.0%
!! AAGGCACTGGACCCTATAAA+AGG - chr7_4:54006085-54006104 None:intergenic 45.0%
TTTATAGGGTCCAGTGCCTT+TGG + chr7_4:54006085-54006104 Msa1162980:intron 45.0%
GTCCAGTGCCTTTGGATATT+GGG + chr7_4:54006093-54006112 Msa1162980:CDS 45.0%
! GCTAGTCTCCCAATATCCAA+AGG - chr7_4:54006104-54006123 None:intergenic 45.0%
GATATTGGGAGACTAGCAAC+AGG + chr7_4:54006107-54006126 Msa1162980:CDS 45.0%
AGCAACAGGATATGGAATGG+GGG + chr7_4:54006121-54006140 Msa1162980:CDS 45.0%
GCAATTTCTGCTACGAACAC+AGG - chr7_4:54006256-54006275 None:intergenic 45.0%
TGCCCTGACTACCTTAAATC+AGG + chr7_4:54006294-54006313 Msa1162980:CDS 45.0%
TCATTCCAGAGTCTCCTAGA+TGG + chr7_4:54006665-54006684 Msa1162980:CDS 45.0%
TAATGAATGCAGGCAAAGCG+AGG + chr7_4:54006781-54006800 Msa1162980:intron 45.0%
! AGGACGCGCAAAAGATTTTG+TGG + chr7_4:54006801-54006820 Msa1162980:CDS 45.0%
!! AATGTGTGTGGTGGACTACT+AGG + chr7_4:54007132-54007151 Msa1162980:intron 45.0%
GTAGATTGGAGTAGGGCTTA+TGG + chr7_4:54007282-54007301 Msa1162980:intron 45.0%
! ATGGTTTGCCAGCAATTAGG+GGG + chr7_4:54007301-54007320 Msa1162980:CDS 45.0%
!! CATTGATTCCCCCTAATTGC+TGG - chr7_4:54007312-54007331 None:intergenic 45.0%
CAGCAATTAGGGGGAATCAA+TGG + chr7_4:54007310-54007329 Msa1162980:CDS 45.0%
CATAGGATTTCCTTCTGCGA+CGG + chr7_4:54007547-54007566 Msa1162980:intron 45.0%
ATAGGATTTCCTTCTGCGAC+GGG + chr7_4:54007548-54007567 Msa1162980:intron 45.0%
!! TCATGGTTGAGTTGGATTCG+GGG - chr7_4:54007651-54007670 None:intergenic 45.0%
CAGATTGTGATCACAGGTGT+TGG + chr7_4:54007683-54007702 Msa1162980:intron 45.0%
TTACCAAAAGTAGGGGCTTC+CGG - chr7_4:54007733-54007752 None:intergenic 45.0%
ACTTGCCGTAATCGGCATAT+TGG + chr7_4:54008019-54008038 Msa1162980:CDS 45.0%
CCGTAATCGGCATATTGGTA+TGG + chr7_4:54008024-54008043 Msa1162980:intron 45.0%
TAGGAATGGGAGCAATTCCA+TGG + chr7_4:54008159-54008178 Msa1162980:CDS 45.0%
AGGAATGGGAGCAATTCCAT+GGG + chr7_4:54008160-54008179 Msa1162980:CDS 45.0%
ACTGAAAGTGGGGAAAGGAT+GGG - chr7_4:54008207-54008226 None:intergenic 45.0%
AACTGAAAGTGGGGAAAGGA+TGG - chr7_4:54008208-54008227 None:intergenic 45.0%
CGCATAAATAGATCCTCTCC+AGG - chr7_4:54008363-54008382 None:intergenic 45.0%
TCCAGTCAATATTAAGGGGC+AGG + chr7_4:54008488-54008507 Msa1162980:CDS 45.0%
!! TAGTGAACTGGTTTGGTGCA+TGG + chr7_4:54008529-54008548 Msa1162980:CDS 45.0%
GATTGCAGCGTAAAGAACGA+AGG - chr7_4:54008749-54008768 None:intergenic 45.0%
GTAGTAGTCCCAGAAACCAA+AGG + chr7_4:54008796-54008815 Msa1162980:CDS 45.0%
TGGCTGCCTGTAATTGTTCA+AGG - chr7_4:54008828-54008847 None:intergenic 45.0%
GCGATTTGTGTAGTGTTTGG+TGG + chr7_4:54008866-54008885 Msa1162980:three_prime_UTR 45.0%
!! GGACCTATTGCCGATTTCGT+TGG + chr7_4:54005799-54005818 Msa1162980:CDS 50.0%
GGTCCAGTGCCTTTGGATAT+TGG + chr7_4:54006092-54006111 Msa1162980:CDS 50.0%
! CTCCCAATATCCAAAGGCAC+TGG - chr7_4:54006098-54006117 None:intergenic 50.0%
GGGAGACTAGCAACAGGATA+TGG + chr7_4:54006113-54006132 Msa1162980:CDS 50.0%
ATTGCGCCAAAAGAACTCCG+AGG + chr7_4:54006271-54006290 Msa1162980:CDS 50.0%
! TTAAGGTAGTCAGGGCACCT+CGG - chr7_4:54006291-54006310 None:intergenic 50.0%
GCAACACAGCAGTGGGAATA+AGG - chr7_4:54006630-54006649 None:intergenic 50.0%
AGAACAGCTCGCAAAACCGA+AGG + chr7_4:54007021-54007040 Msa1162980:CDS 50.0%
!! TGGTGGACTACTAGGTTGAG+AGG + chr7_4:54007140-54007159 Msa1162980:intron 50.0%
! TGGACTACTAGGTTGAGAGG+TGG + chr7_4:54007143-54007162 Msa1162980:intron 50.0%
TAGGATTTCCTTCTGCGACG+GGG + chr7_4:54007549-54007568 Msa1162980:intron 50.0%
ATTATACTCCCCGTCGCAGA+AGG - chr7_4:54007560-54007579 None:intergenic 50.0%
!! CATGGTTGAGTTGGATTCGG+GGG - chr7_4:54007650-54007669 None:intergenic 50.0%
!! TCTGGATCAGGATTGGTTGC+AGG + chr7_4:54007847-54007866 Msa1162980:CDS 50.0%
ACAGGTTCATGAAGTGGCTG+TGG + chr7_4:54007983-54008002 Msa1162980:intron 50.0%
CAGGTTCATGAAGTGGCTGT+GGG + chr7_4:54007984-54008003 Msa1162980:intron 50.0%
TGAAAGTGGGGAAAGGATGG+GGG - chr7_4:54008205-54008224 None:intergenic 50.0%
CTGAAAGTGGGGAAAGGATG+GGG - chr7_4:54008206-54008225 None:intergenic 50.0%
GCAAAATGTTGATCCCCGAC+TGG + chr7_4:54008315-54008334 Msa1162980:intron 50.0%
GCCTGCCCCTTAATATTGAC+TGG - chr7_4:54008492-54008511 None:intergenic 50.0%
GTCAATATTAAGGGGCAGGC+AGG + chr7_4:54008492-54008511 Msa1162980:CDS 50.0%
! CTCATGAGTTGGAGCTCCTA+TGG + chr7_4:54008576-54008595 Msa1162980:CDS 50.0%
ACAGGCAGCCATTAACGCAT+AGG + chr7_4:54008837-54008856 Msa1162980:CDS 50.0%
GTGGAAGGTGGCAAGCAGAA+AGG + chr7_4:54005098-54005117 Msa1162980:CDS 55.0%
!! AGGGCACCTCGGAGTTCTTT+TGG - chr7_4:54006280-54006299 None:intergenic 55.0%
!! TCCCACTGCTGTGTTGCTTC+TGG + chr7_4:54006633-54006652 Msa1162980:CDS 55.0%
CCCAGAAGCAACACAGCAGT+GGG - chr7_4:54006637-54006656 None:intergenic 55.0%
!! CCCACTGCTGTGTTGCTTCT+GGG + chr7_4:54006634-54006653 Msa1162980:CDS 55.0%
ACCCAGAAGCAACACAGCAG+TGG - chr7_4:54006638-54006657 None:intergenic 55.0%
TCCAGAGTCTCCTAGATGGC+TGG + chr7_4:54006669-54006688 Msa1162980:CDS 55.0%
ACCAGCCATCTAGGAGACTC+TGG - chr7_4:54006673-54006692 None:intergenic 55.0%
CGTATCTGTCACTGCCACAC+AGG + chr7_4:54006982-54007001 Msa1162980:intron 55.0%
GCAGCCCTCATAGATAGAGC+AGG + chr7_4:54007707-54007726 Msa1162980:CDS 55.0%
CCGGCCTGCTCTATCTATGA+GGG - chr7_4:54007714-54007733 None:intergenic 55.0%
CCCTCATAGATAGAGCAGGC+CGG + chr7_4:54007711-54007730 Msa1162980:CDS 55.0%
TCCGGCCTGCTCTATCTATG+AGG - chr7_4:54007715-54007734 None:intergenic 55.0%
GTCCCAGCACTTGCCGTAAT+CGG + chr7_4:54008011-54008030 Msa1162980:CDS 55.0%
! TGCCGATTACGGCAAGTGCT+GGG - chr7_4:54008016-54008035 None:intergenic 55.0%
! ATGCCGATTACGGCAAGTGC+TGG - chr7_4:54008017-54008036 None:intergenic 55.0%
! TCCATGGGTTGTGATGTCCG+AGG + chr7_4:54008175-54008194 Msa1162980:CDS 55.0%
ACCTCGGACATCACAACCCA+TGG - chr7_4:54008179-54008198 None:intergenic 55.0%
!! GAAAGGATGGGGGAGTACCT+CGG - chr7_4:54008195-54008214 None:intergenic 55.0%
! GCTCGCAAAACCGAAGGTGC+TGG + chr7_4:54007027-54007046 Msa1162980:CDS 60.0%
! AGGCCGGAAGCCCCTACTTT+TGG + chr7_4:54007727-54007746 Msa1162980:CDS 60.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 54004958 54009106 54004958 ID=Msa1162980;Name=Msa1162980
chr7_4 mRNA 54004958 54009106 54004958 ID=Msa1162980-mRNA-1;Parent=Msa1162980;Name=Msa1162980-mRNA-1;_AED=0.19;_eAED=0.19;_QI=122|1|1|1|1|1|18|248|475
chr7_4 exon 54004958 54005250 54004958 ID=Msa1162980-mRNA-1:exon:15641;Parent=Msa1162980-mRNA-1
chr7_4 exon 54005422 54005484 54005422 ID=Msa1162980-mRNA-1:exon:15642;Parent=Msa1162980-mRNA-1
chr7_4 exon 54005742 54005831 54005742 ID=Msa1162980-mRNA-1:exon:15643;Parent=Msa1162980-mRNA-1
chr7_4 exon 54005941 54006000 54005941 ID=Msa1162980-mRNA-1:exon:15644;Parent=Msa1162980-mRNA-1
chr7_4 exon 54006092 54006157 54006092 ID=Msa1162980-mRNA-1:exon:15645;Parent=Msa1162980-mRNA-1
chr7_4 exon 54006250 54006315 54006250 ID=Msa1162980-mRNA-1:exon:15646;Parent=Msa1162980-mRNA-1
chr7_4 exon 54006427 54006502 54006427 ID=Msa1162980-mRNA-1:exon:15647;Parent=Msa1162980-mRNA-1
chr7_4 exon 54006626 54006690 54006626 ID=Msa1162980-mRNA-1:exon:15648;Parent=Msa1162980-mRNA-1
chr7_4 exon 54006793 54006885 54006793 ID=Msa1162980-mRNA-1:exon:15649;Parent=Msa1162980-mRNA-1
chr7_4 exon 54007004 54007084 54007004 ID=Msa1162980-mRNA-1:exon:15650;Parent=Msa1162980-mRNA-1
chr7_4 exon 54007286 54007370 54007286 ID=Msa1162980-mRNA-1:exon:15651;Parent=Msa1162980-mRNA-1
chr7_4 exon 54007552 54007595 54007552 ID=Msa1162980-mRNA-1:exon:15652;Parent=Msa1162980-mRNA-1
chr7_4 exon 54007686 54007748 54007686 ID=Msa1162980-mRNA-1:exon:15653;Parent=Msa1162980-mRNA-1
chr7_4 exon 54007844 54007903 54007844 ID=Msa1162980-mRNA-1:exon:15654;Parent=Msa1162980-mRNA-1
chr7_4 exon 54007987 54008040 54007987 ID=Msa1162980-mRNA-1:exon:15655;Parent=Msa1162980-mRNA-1
chr7_4 exon 54008137 54008196 54008137 ID=Msa1162980-mRNA-1:exon:15656;Parent=Msa1162980-mRNA-1
chr7_4 exon 54008483 54008597 54008483 ID=Msa1162980-mRNA-1:exon:15657;Parent=Msa1162980-mRNA-1
chr7_4 exon 54008743 54009106 54008743 ID=Msa1162980-mRNA-1:exon:15658;Parent=Msa1162980-mRNA-1
chr7_4 five_prime_UTR 54004958 54005079 54004958 ID=Msa1162980-mRNA-1:five_prime_utr;Parent=Msa1162980-mRNA-1
chr7_4 CDS 54005080 54005250 54005080 ID=Msa1162980-mRNA-1:cds;Parent=Msa1162980-mRNA-1
chr7_4 CDS 54005422 54005484 54005422 ID=Msa1162980-mRNA-1:cds;Parent=Msa1162980-mRNA-1
chr7_4 CDS 54005742 54005831 54005742 ID=Msa1162980-mRNA-1:cds;Parent=Msa1162980-mRNA-1
chr7_4 CDS 54005941 54006000 54005941 ID=Msa1162980-mRNA-1:cds;Parent=Msa1162980-mRNA-1
chr7_4 CDS 54006092 54006157 54006092 ID=Msa1162980-mRNA-1:cds;Parent=Msa1162980-mRNA-1
chr7_4 CDS 54006250 54006315 54006250 ID=Msa1162980-mRNA-1:cds;Parent=Msa1162980-mRNA-1
chr7_4 CDS 54006427 54006502 54006427 ID=Msa1162980-mRNA-1:cds;Parent=Msa1162980-mRNA-1
chr7_4 CDS 54006626 54006690 54006626 ID=Msa1162980-mRNA-1:cds;Parent=Msa1162980-mRNA-1
chr7_4 CDS 54006793 54006885 54006793 ID=Msa1162980-mRNA-1:cds;Parent=Msa1162980-mRNA-1
chr7_4 CDS 54007004 54007084 54007004 ID=Msa1162980-mRNA-1:cds;Parent=Msa1162980-mRNA-1
chr7_4 CDS 54007286 54007370 54007286 ID=Msa1162980-mRNA-1:cds;Parent=Msa1162980-mRNA-1
chr7_4 CDS 54007552 54007595 54007552 ID=Msa1162980-mRNA-1:cds;Parent=Msa1162980-mRNA-1
chr7_4 CDS 54007686 54007748 54007686 ID=Msa1162980-mRNA-1:cds;Parent=Msa1162980-mRNA-1
chr7_4 CDS 54007844 54007903 54007844 ID=Msa1162980-mRNA-1:cds;Parent=Msa1162980-mRNA-1
chr7_4 CDS 54007987 54008040 54007987 ID=Msa1162980-mRNA-1:cds;Parent=Msa1162980-mRNA-1
chr7_4 CDS 54008137 54008196 54008137 ID=Msa1162980-mRNA-1:cds;Parent=Msa1162980-mRNA-1
chr7_4 CDS 54008483 54008597 54008483 ID=Msa1162980-mRNA-1:cds;Parent=Msa1162980-mRNA-1
chr7_4 CDS 54008743 54008858 54008743 ID=Msa1162980-mRNA-1:cds;Parent=Msa1162980-mRNA-1
chr7_4 three_prime_UTR 54008859 54009106 54008859 ID=Msa1162980-mRNA-1:three_prime_utr;Parent=Msa1162980-mRNA-1
Gene Sequence

>Msa1162980

ATGGATATCAAAGAGGATGTGGAAGGTGGCAAGCAGAAAGGAATAAGAGAACCATTGATAGGGGAACAAAACAATCAACTTGTCCATGCAAGCAAAGATCATCATCATCCATGGATGGTTTACTTCACCACATTCATTGCAGTTTGTGGTTCTTATGAATTTGGTGCTTGTGCTGGATATTCATCTCCAACTCAAGAAGCTATTAGGAAGGATCTTAGTCTGTCTTTGGCAGAGTACTCCTTGTTTGGCTCCATCTTGACATTTGGTGCGATGATTGGTGCAATAACAAGTGGACCTATTGCCGATTTCGTTGGAAGAAAGGGGGCAATGAGAGTGTCAAGTGCTTTTTGTATTGCAGGGTGGCTTGTTATTTACTTTTCTGAGGGTCCAGTGCCTTTGGATATTGGGAGACTAGCAACAGGATATGGAATGGGGGTTTTTTCATTTGTGGTTCCTGTGTTCGTAGCAGAAATTGCGCCAAAAGAACTCCGAGGTGCCCTGACTACCTTAAATCAGTTCATGATTGTTACTGCTGTATCAGTGTCATTCATAATTGGAACAGTACTTTCATGGAGGGCTTTAGCTATAATCGGCCTTATTCCCACTGCTGTGTTGCTTCTGGGTCTGTTTTTCATTCCAGAGTCTCCTAGATGGCTGGCAAAGCGAGGACGCGCAAAAGATTTTGTGGCAGCATTACAAATACTTCGCGGTAAAGATGCTGATATATCTGAAGAGGCAGAAGAAATTCAGGATTATATAACTAGTTTAGAACAGCTCGCAAAACCGAAGGTGCTGGATTTGTTTCAAAGAAGATATTTACGCTCACTCACGATTGGAGTAGGGCTTATGGTTTGCCAGCAATTAGGGGGAATCAATGGTGTTTGCTTTTATACCAGTAGTATTTTTGATCTAGCAGGATTTCCTTCTGCGACGGGGAGTATAATATACGCTATCCTTCAGATTGTGATCACAGGTGTTGGAGCAGCCCTCATAGATAGAGCAGGCCGGAAGCCCCTACTTTTGGTATCTGGATCAGGATTGGTTGCAGGATGTATATTTACAGCAGTTGCATTCTATCTCAAGGTTCATGAAGTGGCTGTGGGAGCAGTCCCAGCACTTGCCGTAATCGGCATATTGGTCTACATAGGATCGTTTTCAATAGGAATGGGAGCAATTCCATGGGTTGTGATGTCCGAGATATTTCCAGTCAATATTAAGGGGCAGGCAGGAAGCATAGCAACATTAGTGAACTGGTTTGGTGCATGGTTATGCTCCTATACTTTCAACTTTCTCATGAGTTGGAGCTCCTATGGTACCTTCGTTCTTTACGCTGCAATCAATGCACTGTCTATATTATTTATAGTTGTAGTAGTCCCAGAAACCAAAGGTAAAAGCCTTGAACAATTACAGGCAGCCATTAACGCATAG
Protein sequence

>Msa1162980

MDIKEDVEGGKQKGIREPLIGEQNNQLVHASKDHHHPWMVYFTTFIAVCGSYEFGACAGYSSPTQEAIRKDLSLSLAEYSLFGSILTFGAMIGAITSGPIADFVGRKGAMRVSSAFCIAGWLVIYFSEGPVPLDIGRLATGYGMGVFSFVVPVFVAEIAPKELRGALTTLNQFMIVTAVSVSFIIGTVLSWRALAIIGLIPTAVLLLGLFFIPESPRWLAKRGRAKDFVAALQILRGKDADISEEAEEIQDYITSLEQLAKPKVLDLFQRRYLRSLTIGVGLMVCQQLGGINGVCFYTSSIFDLAGFPSATGSIIYAILQIVITGVGAALIDRAGRKPLLLVSGSGLVAGCIFTAVAFYLKVHEVAVGAVPALAVIGILVYIGSFSIGMGAIPWVVMSEIFPVNIKGQAGSIATLVNWFGAWLCSYTFNFLMSWSSYGTFVLYAAINALSILFIVVVVPETKGKSLEQLQAAINA*