AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0462590

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0462590 MtrunA17_Chr3g0094811 90.515 485 18 1 1 485 1 457 0.0 899
Msa0462590 MtrunA17_Chr2g0304931 62.609 460 138 5 27 483 35 463 0.0 593
Msa0462590 MtrunA17_Chr7g0221551 57.917 480 169 3 8 482 6 457 0.0 579
Msa0462590 MtrunA17_Chr3g0131731 56.098 492 180 7 2 485 1 464 0.0 575
Msa0462590 MtrunA17_Chr8g0385871 56.399 461 168 3 27 482 30 462 0.0 556
Msa0462590 MtrunA17_Chr1g0204191 52.735 457 161 7 27 482 88 490 4.51e-162 468
Msa0462590 MtrunA17_Chr3g0126051 42.505 487 226 7 17 482 10 463 1.76e-137 404
Msa0462590 MtrunA17_Chr3g0126031 42.536 489 233 9 8 483 4 457 4.56e-136 400
Msa0462590 MtrunA17_Chr5g0431301 42.710 487 233 8 10 483 9 462 2.48e-131 389
Msa0462590 MtrunA17_Chr1g0165811 60.410 293 86 3 3 295 4 266 2.04e-125 366
Msa0462590 MtrunA17_Chr4g0038311 39.789 475 225 13 27 482 31 463 3.53e-111 337
Msa0462590 MtrunA17_Chr7g0219051 39.271 494 243 10 9 485 14 467 3.03e-108 329
Msa0462590 MtrunA17_Chr1g0199991 39.059 489 243 12 10 483 9 457 5.90e-108 328
Msa0462590 MtrunA17_Chr3g0090331 39.700 466 225 11 27 482 71 490 2.63e-104 320
Msa0462590 MtrunA17_Chr1g0199971 37.223 497 257 12 2 483 1 457 5.25e-104 318
Msa0462590 MtrunA17_Chr4g0020241 38.776 490 237 12 7 483 49 488 1.21e-103 318
Msa0462590 MtrunA17_Chr3g0118841 39.610 462 217 12 28 478 76 486 1.85e-102 315
Msa0462590 MtrunA17_Chr2g0309541 37.702 496 245 17 10 484 13 465 5.33e-102 313
Msa0462590 MtrunA17_Chr1g0153881 38.380 469 227 11 25 484 84 499 1.26e-101 313
Msa0462590 MtrunA17_Chr2g0309511 38.347 472 235 14 27 484 35 464 4.58e-101 311
Msa0462590 MtrunA17_Chr2g0309521 38.055 473 235 14 27 484 35 464 2.23e-100 309
Msa0462590 MtrunA17_Chr3g0118851 39.355 465 215 13 28 478 75 486 7.55e-100 308
Msa0462590 MtrunA17_Chr4g0047861 37.945 477 232 11 29 483 52 486 3.79e-99 306
Msa0462590 MtrunA17_Chr2g0281621 36.478 477 237 10 29 483 34 466 9.02e-98 302
Msa0462590 MtrunA17_Chr3g0118881 37.815 476 225 14 28 483 75 499 1.81e-97 303
Msa0462590 MtrunA17_Chr1g0153941 36.207 522 237 15 4 484 48 514 2.29e-94 295
Msa0462590 MtrunA17_Chr2g0318911 36.809 470 245 13 27 484 36 465 2.05e-93 291
Msa0462590 MtrunA17_Chr3g0118831 36.660 491 214 12 4 483 56 460 3.54e-92 288
Msa0462590 MtrunA17_Chr1g0165821 75.419 179 42 1 304 482 2 178 4.56e-91 275
Msa0462590 MtrunA17_Chr4g0068841 34.442 511 258 14 8 483 10 478 3.25e-90 283
Msa0462590 MtrunA17_Chr3g0118891 37.229 462 196 14 28 478 75 453 4.07e-88 277
Msa0462590 MtrunA17_Chr7g0229651 64.179 201 70 1 231 429 1 201 1.24e-86 264
Msa0462590 MtrunA17_Chr3g0118861 36.421 475 204 14 27 482 72 467 3.70e-86 273
Msa0462590 MtrunA17_Chr2g0281641 38.071 394 214 9 110 484 7 389 3.73e-82 259
Msa0462590 MtrunA17_Chr4g0068861 33.836 464 229 17 8 437 57 476 5.38e-74 241
Msa0462590 MtrunA17_Chr7g0234051 30.899 534 271 18 1 478 1 492 7.18e-69 228
Msa0462590 MtrunA17_Chr8g0338461 32.530 498 231 16 43 481 44 495 3.19e-66 221
Msa0462590 MtrunA17_Chr7g0249431 30.827 532 268 20 10 481 7 498 5.56e-60 204
Msa0462590 MtrunA17_Chr1g0153931 49.289 211 70 4 30 231 75 257 4.36e-57 190
Msa0462590 MtrunA17_Chr7g0234041 31.320 447 216 15 43 440 40 444 1.42e-53 187
Msa0462590 MtrunA17_Chr2g0285371 26.059 472 279 14 37 481 41 469 2.99e-47 170
Msa0462590 MtrunA17_Chr2g0327401 29.348 460 248 19 44 483 100 502 3.76e-47 170
Msa0462590 MtrunA17_Chr4g0009711 28.049 492 277 19 3 465 11 454 5.17e-46 166
Msa0462590 MtrunA17_Chr2g0285351 24.947 473 284 15 37 481 40 469 1.22e-45 165
Msa0462590 MtrunA17_Chr1g0171411 30.323 465 245 17 42 485 81 487 1.41e-45 166
Msa0462590 MtrunA17_Chr4g0009681 27.668 506 284 17 1 472 1 458 1.66e-45 165
Msa0462590 MtrunA17_Chr4g0009651 27.292 480 273 17 30 481 39 470 1.89e-45 165
Msa0462590 MtrunA17_Chr4g0009701 26.804 485 269 17 30 481 39 470 3.58e-45 164
Msa0462590 MtrunA17_Chr4g0009661 26.875 480 275 17 30 481 39 470 5.84e-45 164
Msa0462590 MtrunA17_Chr4g0028271 29.348 460 237 17 44 478 97 493 6.31e-45 164
Msa0462590 MtrunA17_Chr1g0199171 28.825 451 247 15 46 478 92 486 1.02e-44 164
Msa0462590 MtrunA17_Chr4g0028261 28.602 472 226 17 44 478 118 515 8.04e-44 161
Msa0462590 MtrunA17_Chr2g0285381 26.395 466 258 14 47 481 54 465 8.55e-44 160
Msa0462590 MtrunA17_Chr4g0009671 26.271 472 273 15 37 481 12 435 3.00e-43 158
Msa0462590 MtrunA17_Chr3g0093971 25.249 503 295 16 1 476 1 449 4.44e-42 155
Msa0462590 MtrunA17_Chr4g0028281 28.947 456 246 19 44 479 95 492 4.98e-42 156
Msa0462590 MtrunA17_Chr3g0133011 26.112 517 289 17 9 481 29 496 3.49e-40 151
Msa0462590 MtrunA17_Chr2g0327381 27.178 482 267 13 44 479 94 537 4.17e-40 152
Msa0462590 MtrunA17_Chr2g0327371 27.406 478 252 17 47 479 86 513 3.89e-39 148
Msa0462590 MtrunA17_Chr7g0229631 55.303 132 29 3 20 151 24 125 3.92e-39 139
Msa0462590 MtrunA17_Chr4g0028241 27.897 466 244 18 43 479 88 490 1.26e-37 144
Msa0462590 MtrunA17_Chr4g0009641 25.049 507 281 16 3 481 11 446 2.23e-37 142
Msa0462590 MtrunA17_Chr4g0009721 24.892 462 228 15 30 465 35 403 1.51e-31 125
Msa0462590 MtrunA17_Chr1g0153921 32.377 244 131 9 247 484 3 218 5.20e-31 119
Msa0462590 MtrunA17_Chr7g0229621 53.719 121 26 3 15 135 11 101 1.45e-30 114
Msa0462590 MtrunA17_Chr7g0229611 51.969 127 25 4 15 135 5 101 2.63e-30 113
Msa0462590 MtrunA17_Chr5g0447441 25.000 500 293 20 1 481 1 437 5.20e-27 113
Msa0462590 MtrunA17_Chr4g0006541 50.000 78 39 0 211 288 7 84 4.61e-22 90.9
Msa0462590 MtrunA17_Chr4g0044051 23.447 499 303 16 2 481 3 441 1.89e-21 97.1
Msa0462590 MtrunA17_Chr7g0264221 56.977 86 35 2 397 481 13 97 6.83e-21 87.8
Msa0462590 MtrunA17_Chr2g0279371 30.058 173 82 5 54 218 37 178 1.31e-16 78.2
Msa0462590 MtrunA17_Chr7g0229641 60.417 48 19 0 184 231 43 90 5.11e-15 70.5
Msa0462590 MtrunA17_Chr2g0281631 47.619 63 33 0 29 91 44 106 2.85e-14 69.3
Msa0462590 MtrunA17_Chr1g0171851 58.333 48 19 1 31 77 2 49 6.19e-12 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0462590 AT1G28110.1 60.613 457 149 2 29 482 30 458 0.0 590
Msa0462590 AT1G28110.2 60.613 457 149 2 29 482 30 458 0.0 590
Msa0462590 AT2G33530.1 58.785 461 157 4 27 482 30 462 0.0 572
Msa0462590 AT1G43780.1 45.064 466 213 10 29 482 36 470 2.41e-131 389
Msa0462590 AT5G42230.1 42.531 482 237 7 11 482 9 460 4.38e-130 385
Msa0462590 AT5G42230.2 42.531 482 237 7 11 482 9 460 4.38e-130 385
Msa0462590 AT5G42240.1 43.923 469 221 8 25 482 27 464 5.38e-130 385
Msa0462590 AT2G12480.3 42.505 487 230 8 10 482 7 457 1.27e-129 384
Msa0462590 AT2G12480.4 41.564 486 214 8 10 483 7 434 2.75e-123 367
Msa0462590 AT2G12480.1 40.947 486 215 8 10 483 7 432 2.45e-121 362
Msa0462590 AT2G12480.2 40.862 487 215 9 10 483 7 433 1.97e-119 357
Msa0462590 AT2G24010.1 39.270 466 232 9 27 482 27 451 1.22e-106 325
Msa0462590 AT2G24010.2 39.659 469 241 10 27 482 27 466 4.41e-106 324
Msa0462590 AT4G30610.1 37.575 503 251 12 2 482 1 462 5.70e-106 323
Msa0462590 AT2G35770.1 37.705 488 249 10 8 483 15 459 2.89e-105 322
Msa0462590 AT2G24000.1 37.605 476 234 12 27 481 27 460 3.26e-104 319
Msa0462590 AT1G61130.1 38.632 497 249 13 2 482 4 460 9.38e-104 318
Msa0462590 AT5G23210.1 38.710 496 220 13 27 484 48 497 9.91e-104 319
Msa0462590 AT3G02110.1 38.889 486 235 12 19 482 26 471 1.41e-103 318
Msa0462590 AT4G15100.1 38.636 484 232 11 24 481 36 480 2.15e-103 318
Msa0462590 AT1G11080.1 38.636 484 228 10 27 482 47 489 6.04e-103 317
Msa0462590 AT1G11080.2 38.636 484 228 10 27 482 47 489 7.35e-103 317
Msa0462590 AT3G07990.1 38.412 466 235 12 29 482 32 457 3.29e-101 311
Msa0462590 AT2G35780.1 38.197 466 238 11 27 482 26 451 4.24e-101 311
Msa0462590 AT3G63470.1 39.869 459 230 11 29 482 80 497 5.84e-101 312
Msa0462590 AT2G24010.3 37.551 490 239 11 31 482 2 462 1.78e-99 307
Msa0462590 AT5G08260.1 37.398 492 241 11 18 483 27 477 4.52e-99 306
Msa0462590 AT2G05850.1 36.518 471 244 11 24 482 57 484 1.35e-98 305
Msa0462590 AT4G30810.1 37.844 473 235 12 27 483 34 463 1.23e-96 300
Msa0462590 AT3G17180.1 36.157 484 236 12 29 483 37 476 3.76e-94 293
Msa0462590 AT3G52010.1 37.161 479 245 14 16 482 50 484 2.82e-93 291
Msa0462590 AT5G23210.3 38.085 449 195 12 27 437 48 451 4.75e-89 280
Msa0462590 AT3G52000.1 36.864 472 240 15 22 482 55 479 3.45e-88 278
Msa0462590 AT5G23210.5 39.141 419 199 12 103 483 1 401 7.64e-85 267
Msa0462590 AT3G52020.1 36.111 468 242 12 27 482 76 498 2.09e-83 266
Msa0462590 AT5G23210.2 38.929 411 195 12 111 483 8 400 4.80e-82 260
Msa0462590 AT3G17180.2 35.360 444 214 12 29 443 37 436 2.42e-80 256
Msa0462590 AT2G24010.4 37.500 376 204 8 31 396 2 356 1.48e-75 241
Msa0462590 AT4G12910.1 33.582 536 242 18 9 481 13 497 2.61e-73 240
Msa0462590 AT3G25420.1 34.898 490 230 17 43 481 43 494 6.57e-70 231
Msa0462590 AT5G23210.4 37.808 365 172 11 111 437 8 355 1.61e-67 221
Msa0462590 AT2G24000.2 31.435 474 203 14 27 481 27 397 3.89e-67 221
Msa0462590 AT4G12910.2 32.996 494 217 18 9 439 13 455 2.71e-61 207
Msa0462590 AT1G73300.1 29.825 456 245 14 42 481 45 441 1.12e-58 200
Msa0462590 AT1G73300.2 29.825 456 245 14 42 481 45 441 1.12e-58 200
Msa0462590 AT5G36180.1 29.060 468 256 15 31 481 33 441 5.06e-56 193
Msa0462590 AT1G73280.1 29.303 488 263 17 14 481 16 441 9.46e-56 192
Msa0462590 AT3G10450.1 30.000 460 239 16 42 481 41 437 2.05e-55 191
Msa0462590 AT2G22980.1 27.938 451 256 13 42 481 38 430 4.42e-55 190
Msa0462590 AT3G12203.3 29.847 459 250 14 37 481 16 416 7.89e-55 189
Msa0462590 AT2G22990.1 27.753 454 259 11 42 481 35 433 7.97e-55 189
Msa0462590 AT3G12203.1 29.847 459 250 14 37 481 37 437 1.10e-54 189
Msa0462590 AT3G10450.2 29.956 454 235 16 48 481 4 394 1.50e-54 188
Msa0462590 AT1G73270.2 27.789 475 253 14 31 481 33 441 4.95e-54 187
Msa0462590 AT1G73270.1 27.789 475 253 14 31 481 33 441 8.19e-54 187
Msa0462590 AT1G33540.1 28.875 471 257 17 42 481 41 464 8.61e-53 185
Msa0462590 AT2G23000.1 28.205 468 264 16 31 481 25 437 1.72e-52 183
Msa0462590 AT2G23000.2 28.205 468 264 16 31 481 25 437 1.72e-52 183
Msa0462590 AT1G73290.1 27.527 465 242 14 42 481 44 438 1.78e-52 183
Msa0462590 AT2G22920.2 28.632 468 237 16 42 481 37 435 2.62e-52 183
Msa0462590 AT1G33540.2 28.664 464 255 16 48 481 4 421 7.17e-52 181
Msa0462590 AT3G12240.1 30.217 460 238 17 42 481 40 436 1.33e-51 181
Msa0462590 AT1G73310.1 28.194 454 255 12 42 481 45 441 1.89e-51 181
Msa0462590 AT3G12230.1 29.694 458 243 17 42 481 39 435 9.47e-51 179
Msa0462590 AT2G22980.2 28.169 426 238 12 42 456 38 406 1.20e-50 178
Msa0462590 AT3G10450.4 30.115 435 222 15 42 456 41 413 1.23e-50 178
Msa0462590 AT2G22980.4 27.880 434 245 12 42 464 38 414 1.60e-50 178
Msa0462590 AT3G12203.2 29.519 437 236 14 59 481 1 379 1.78e-50 176
Msa0462590 AT3G12220.1 30.519 462 234 18 42 481 39 435 3.21e-50 177
Msa0462590 AT3G10450.3 30.070 429 218 15 48 456 4 370 1.05e-49 174
Msa0462590 AT5G22980.1 30.803 461 234 19 42 479 96 494 2.21e-49 177
Msa0462590 AT2G22990.3 27.972 429 241 10 42 456 35 409 2.22e-49 176
Msa0462590 AT2G22970.1 27.742 465 243 14 42 481 37 433 2.33e-49 175
Msa0462590 AT2G22990.4 28.037 428 240 10 42 455 35 408 2.34e-49 174
Msa0462590 AT3G12220.2 30.482 456 230 18 48 481 15 405 3.14e-49 174
Msa0462590 AT2G22990.5 26.872 454 254 12 42 481 35 424 6.29e-48 171
Msa0462590 AT3G56540.1 48.387 186 65 3 27 210 76 232 2.46e-47 165
Msa0462590 AT2G23010.1 26.681 461 257 14 42 481 37 437 3.02e-47 169
Msa0462590 AT5G09640.1 26.923 494 292 18 15 481 14 465 1.24e-46 168
Msa0462590 AT3G10410.1 30.482 456 234 20 44 477 99 493 1.45e-46 169
Msa0462590 AT2G23010.2 26.464 461 258 14 42 481 37 437 1.82e-46 167
Msa0462590 AT3G45010.1 28.970 466 247 18 42 483 99 504 1.99e-46 169
Msa0462590 AT2G22970.4 27.727 440 226 13 42 456 37 409 1.73e-44 161
Msa0462590 AT2G22970.3 28.246 439 223 14 42 455 37 408 4.58e-44 161
Msa0462590 AT1G73310.2 28.058 417 230 11 42 444 45 405 2.24e-43 159
Msa0462590 AT5G36180.5 29.412 357 213 11 134 481 13 339 1.01e-42 155
Msa0462590 AT5G36180.3 29.412 357 213 11 134 481 13 339 1.01e-42 155
Msa0462590 AT1G73290.3 27.465 426 211 13 42 440 44 398 1.97e-42 155
Msa0462590 AT2G22920.1 28.806 427 208 15 42 440 37 395 4.89e-42 154
Msa0462590 AT1G73280.4 29.526 359 210 13 134 481 13 339 5.56e-42 153
Msa0462590 AT2G22990.6 27.246 345 218 8 144 481 1 319 5.63e-39 144
Msa0462590 AT2G22990.2 26.957 345 219 8 144 481 1 319 2.80e-38 142
Msa0462590 AT5G36180.2 29.429 333 197 10 133 456 12 315 5.09e-38 141
Msa0462590 AT1G73280.3 29.395 347 200 13 147 481 1 314 7.67e-38 141
Msa0462590 AT1G73290.2 33.195 241 115 6 42 268 44 252 1.16e-37 140
Msa0462590 AT1G73280.2 28.723 376 197 12 14 371 16 338 6.39e-37 140
Msa0462590 AT2G22980.3 29.042 334 178 10 42 365 38 322 5.53e-36 137
Msa0462590 AT2G22980.5 27.760 317 197 9 144 456 1 289 1.98e-34 131
Msa0462590 AT3G12220.3 34.400 250 117 8 42 274 39 258 1.83e-33 130
Msa0462590 AT3G12220.3 31.250 144 86 6 341 481 250 383 5.15e-11 64.7
Msa0462590 AT2G22920.4 33.613 238 116 6 42 267 37 244 2.17e-33 129
Msa0462590 AT5G36180.4 29.206 315 185 10 134 439 13 298 4.29e-32 125
Msa0462590 AT1G73310.3 28.213 319 195 8 133 444 12 303 2.33e-31 123
Msa0462590 AT2G22970.2 32.500 240 115 7 42 267 37 243 9.11e-31 122
Msa0462590 AT1G15000.1 24.086 465 271 16 35 481 26 426 1.82e-22 100
Msa0462590 AT2G22920.3 26.280 293 156 11 210 481 3 256 1.54e-21 94.4
Msa0462590 AT5G22960.1 29.310 174 75 4 44 217 34 159 1.01e-16 79.0
Msa0462590 AT2G22960.1 28.369 141 94 3 341 481 51 184 9.97e-16 75.9

Find 103 sgRNAs with CRISPR-Local

Find 341 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAGTAGTGCTTTGGTTAAA+TGG 0.193819 3_3:-61673944 Msa0462590:CDS
TGTTGGTGGTTGTTTGTTAA+TGG 0.210673 3_3:-61673594 Msa0462590:CDS
TATCTTATCAACTTCTAAAA+AGG 0.217716 3_3:+61674093 None:intergenic
CTTGAGATTGAAGTTGCTTT+TGG 0.218956 3_3:+61672250 None:intergenic
GATTCCAACCATATCTATTC+TGG 0.242541 3_3:-61669911 Msa0462590:CDS
GGTACACGGTCTTTAGTAAA+TGG 0.249224 3_3:-61669727 Msa0462590:CDS
TCCTATAGAACTTGGTTTAA+TGG 0.256672 3_3:-61669670 Msa0462590:CDS
GTGTAAGAGTTCTTGTATTC+AGG 0.263545 3_3:-61669870 Msa0462590:intron
GATCTCCCTGGTTGTGAAAA+TGG 0.279595 3_3:+61668973 None:intergenic
TATTGTTGAAATCCTACTTT+TGG 0.317444 3_3:+61674052 None:intergenic
CTATGTGTGAACGTGGTTAT+TGG 0.326996 3_3:+61674329 None:intergenic
TGTGTTCAAACCGAAATCTT+TGG 0.329816 3_3:+61669699 None:intergenic
CTCATGAGCTGCTCCTCTTA+TGG 0.337801 3_3:+61668999 None:intergenic
CCGTTTGCGCAAGAGTAAAT+AGG 0.338463 3_3:-61671700 Msa0462590:CDS
AAACATTCACATATTTGAAT+AGG 0.352371 3_3:-61671277 Msa0462590:CDS
GGTTGTTCTTCTGTTGGAGC+TGG 0.353409 3_3:-61673322 Msa0462590:CDS
AATGGATTAGCCAAAGATTT+CGG 0.353684 3_3:-61669709 Msa0462590:CDS
GCAGATAGGGAATCCTCTTC+TGG 0.355694 3_3:-61671861 Msa0462590:intron
TTCATATATCAAAGAATAGT+TGG 0.370578 3_3:+61668910 None:intergenic
GCTCTTCATGCTAAGCTTGT+AGG 0.375959 3_3:-61671239 Msa0462590:CDS
TTATCCTTTGCAACCATAAG+AGG 0.383989 3_3:-61669012 Msa0462590:CDS
GAAGAAGGAATATATAATAA+AGG 0.384440 3_3:+61674267 None:intergenic
CCATTTAACCAAAGCACTAC+TGG 0.385709 3_3:+61673944 None:intergenic
GCTGGATGGACACAAGTATA+TGG 0.392487 3_3:-61669042 Msa0462590:CDS
TGAAGGTTATTTAATGAAGA+AGG 0.394277 3_3:+61674252 None:intergenic
AACAATGAGTTGTGCAAGTT+GGG 0.394486 3_3:+61672277 None:intergenic
CTTCCAAGCCAGTAGTGCTT+TGG 0.414675 3_3:-61673952 Msa0462590:CDS
TCCATTAAACCAAGTTCTAT+AGG 0.420844 3_3:+61669669 None:intergenic
CCTATTTACTCTTGCGCAAA+CGG 0.423561 3_3:+61671700 None:intergenic
AACAATGAGTTCTTTATCAC+AGG 0.423884 3_3:-61672400 Msa0462590:CDS
GGCGGTGATGTTGGTGTTGG+TGG 0.424139 3_3:-61673608 Msa0462590:CDS
AGTAAATAGGCTAGTGTCAA+TGG 0.433325 3_3:-61671687 Msa0462590:CDS
TATGTGTGAACGTGGTTATT+GGG 0.438818 3_3:+61674330 None:intergenic
AGCATATGTGCTAACTCAAC+TGG 0.443526 3_3:-61671424 Msa0462590:intron
CTGGGAAAACTTGTTAAGTC+AGG 0.444625 3_3:-61669892 Msa0462590:CDS
CAACAGAGTCCTATAGAACT+TGG 0.450027 3_3:-61669678 Msa0462590:CDS
ATGGTATTGAAGGTAGGTCT+TGG 0.451454 3_3:-61673575 Msa0462590:intron
GGGCCAGGTTGTTCTTCTGT+TGG 0.454320 3_3:-61673328 Msa0462590:CDS
AGATCTGACTGAGAAGTTGT+TGG 0.456657 3_3:+61674193 None:intergenic
ACTCTAGAGCTGAGTATCTC+TGG 0.456915 3_3:-61671820 Msa0462590:CDS
CTCTTCATGCTAAGCTTGTA+GGG 0.458817 3_3:-61671238 Msa0462590:CDS
TTCACAACCAGGGAGATCAT+TGG 0.460300 3_3:-61668968 Msa0462590:CDS
CACACATAGTATTATACTAT+AGG 0.465657 3_3:-61674315 Msa0462590:five_prime_UTR
ACCTGTCAAATCATCGTTCA+CGG 0.467446 3_3:+61673047 None:intergenic
TAACCAAAGCACTACTGGCT+TGG 0.472081 3_3:+61673949 None:intergenic
TTGTTAATGGTATTGAAGGT+AGG 0.473061 3_3:-61673581 Msa0462590:CDS
GACAACTCTAGGAAGTCAAC+AGG 0.473393 3_3:+61668689 None:intergenic
ATCACAGGGGAGAGCTATGC+AGG 0.475351 3_3:-61672385 Msa0462590:intron
GAGATCATTGGTGCTGCTAA+AGG 0.480114 3_3:-61668956 Msa0462590:CDS
GATTCAGTATTACCGTTGCT+TGG 0.480726 3_3:-61669748 Msa0462590:CDS
TCTAGGAAGTCAACAGGTAA+AGG 0.481012 3_3:+61668695 None:intergenic
AGCACTACTGGCTTGGAAGC+TGG 0.484486 3_3:+61673956 None:intergenic
TTCCTAGAGTTGTCAAACCT+TGG 0.487319 3_3:-61668680 Msa0462590:three_prime_UTR
TTTAATTTAGGCGGTGATGT+TGG 0.487548 3_3:-61673617 Msa0462590:CDS
GCTGAGTATCTCTGGTCTCA+TGG 0.494343 3_3:-61671812 Msa0462590:CDS
AAACTGTAGTGTATTCAGTC+TGG 0.496440 3_3:-61668873 Msa0462590:three_prime_UTR
AGAGAAGATAGATGTTTGTG+TGG 0.498648 3_3:-61671306 Msa0462590:CDS
AACTTGGTTTAATGGAAGAC+AGG 0.500267 3_3:-61669662 Msa0462590:intron
TTGGAATCACCTGCTGGTGT+TGG 0.505453 3_3:-61673105 Msa0462590:CDS
ATTCCAACCATATCTATTCT+GGG 0.506746 3_3:-61669910 Msa0462590:CDS
TTGTTTGTTAATGGTATTGA+AGG 0.506851 3_3:-61673585 Msa0462590:CDS
GAATGATTCATTAGTAGAGT+AGG 0.511936 3_3:+61673077 None:intergenic
GTAGGATTTCAACAATATGC+AGG 0.513699 3_3:-61674046 Msa0462590:CDS
CAAAAGCAACTTCAATCTCA+AGG 0.516615 3_3:-61672249 Msa0462590:CDS
GCTTTGGGATATGATTATGA+AGG 0.517158 3_3:+61674235 None:intergenic
AGACATTTCTTAATATTCCA+AGG 0.518595 3_3:+61668663 None:intergenic
TGAATGAGTCTGAGATATCA+TGG 0.519349 3_3:+61674165 None:intergenic
AGTGGCAAACATGCTGTACT+TGG 0.523894 3_3:-61673124 Msa0462590:CDS
TTTCCCAGAATAGATATGGT+TGG 0.524165 3_3:+61669907 None:intergenic
TTAGGCGGTGATGTTGGTGT+TGG 0.527185 3_3:-61673611 Msa0462590:CDS
AGCAGCACCAATGATCTCCC+TGG 0.527781 3_3:+61668961 None:intergenic
TTACCTCAGCAGCCAAAAGT+AGG 0.529670 3_3:-61674064 Msa0462590:CDS
ATTGAAAATGTTATAGCTGC+TGG 0.531654 3_3:+61668622 None:intergenic
TTCCAAGGTTTGACAACTCT+AGG 0.535222 3_3:+61668678 None:intergenic
TAGGAGAAACCAACACCAGC+AGG 0.535980 3_3:+61673096 None:intergenic
TCCGTGAACGATGATTTGAC+AGG 0.542755 3_3:-61673048 Msa0462590:intron
TGCTCCTCTTATGGTTGCAA+AGG 0.542852 3_3:+61669008 None:intergenic
GAACAATGAGTTGTGCAAGT+TGG 0.548381 3_3:+61672276 None:intergenic
AGATGCTGCAGAAAATATGC+AGG 0.549748 3_3:+61668759 None:intergenic
CTGTACTTGGAATCACCTGC+TGG 0.558525 3_3:-61673111 Msa0462590:CDS
AATGATTACAGTTGGAACAA+AGG 0.561761 3_3:-61673247 Msa0462590:intron
AAAACTTGTCTGCACAGTCA+TGG 0.567124 3_3:-61674354 Msa0462590:five_prime_UTR
ACAATGAGTTCTTTATCACA+GGG 0.576910 3_3:-61672399 Msa0462590:CDS
ACCACATGGACCACTTGTAG+TGG 0.577155 3_3:-61671212 Msa0462590:CDS
TATTACCGTTGCTTGGTACA+CGG 0.578535 3_3:-61669741 Msa0462590:CDS
TCATGTCTGGTTTAGCAAGA+GGG 0.582810 3_3:-61671329 Msa0462590:intron
TAAAACTTACCCACTACAAG+TGG 0.584898 3_3:+61671202 None:intergenic
CATAAGAGGAGCAGCTCATG+AGG 0.586244 3_3:-61668998 Msa0462590:CDS
AAAAGCAACTTCAATCTCAA+GGG 0.591189 3_3:-61672248 Msa0462590:CDS
TCTGTGTTGAATTCCAGAAG+AGG 0.596221 3_3:+61671848 None:intergenic
ATGGAGTTGGCATTTCCTAG+TGG 0.600694 3_3:+61668848 None:intergenic
ATTAGAAGACAATATGCAAG+TGG 0.621696 3_3:-61671734 Msa0462590:CDS
AGCTTGTAGGGATCACCACA+TGG 0.629981 3_3:-61671226 Msa0462590:CDS
GTATTCAGTCTGGAACCACT+AGG 0.633895 3_3:-61668863 Msa0462590:three_prime_UTR
CCACATGGACCACTTGTAGT+GGG 0.641254 3_3:-61671211 Msa0462590:intron
GCTCCAACAGAAGAACAACC+TGG 0.642232 3_3:+61673325 None:intergenic
CCCACTACAAGTGGTCCATG+TGG 0.665874 3_3:+61671211 None:intergenic
GTAGTGCTTTGGTTAAATGG+AGG 0.666465 3_3:-61673941 Msa0462590:intron
AAAGACCGTGTACCAAGCAA+CGG 0.670704 3_3:+61669736 None:intergenic
ACAATGAGTTGTGCAAGTTG+GGG 0.679051 3_3:+61672278 None:intergenic
AAATAGGCTAGTGTCAATGG+AGG 0.690398 3_3:-61671684 Msa0462590:intron
TATAATACTATGTGTGAACG+TGG 0.713549 3_3:+61674322 None:intergenic
CAATGAGTTCTTTATCACAG+GGG 0.717844 3_3:-61672398 Msa0462590:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTGCTTTTTTTTTTTTAA+CGG + chr3_3:61669574-61669593 None:intergenic 10.0%
!! TAACAAAAATTAATTATGAA+TGG + chr3_3:61670203-61670222 None:intergenic 10.0%
!!! TTCATAATTAATTTTTGTTA+CGG - chr3_3:61670203-61670222 Msa0462590:intron 10.0%
!!! TGCAATTTTAATTTATTTAT+AGG + chr3_3:61670846-61670865 None:intergenic 10.0%
!!! TTTTTTAAAAAAAAAGAAGT+TGG - chr3_3:61671340-61671359 Msa0462590:intron 10.0%
!!! TTTTTAAAAAAAAAGAAGTT+GGG - chr3_3:61671341-61671360 Msa0462590:intron 10.0%
!!! TAAATCATACTAATTTTTTA+AGG - chr3_3:61671924-61671943 Msa0462590:intron 10.0%
!! AAATTTAACAATGTAAATAA+AGG + chr3_3:61672807-61672826 None:intergenic 10.0%
!! TTTACATTGTTAAATTTATT+CGG - chr3_3:61672810-61672829 Msa0462590:intron 10.0%
!!! TTGATTAATTTTTTTTTTCA+AGG - chr3_3:61672931-61672950 Msa0462590:intron 10.0%
!! GATAAAAAAAATTAAGTTAT+TGG - chr3_3:61673551-61673570 Msa0462590:intron 10.0%
!! AAAAAAAAAGTTTAAATGAA+TGG - chr3_3:61673585-61673604 Msa0462590:CDS 10.0%
!! AAAAACTGAATATTTAAATA+TGG + chr3_3:61673822-61673841 None:intergenic 10.0%
!!! TTAAATATTCAGTTTTTTAT+TGG - chr3_3:61673825-61673844 Msa0462590:intron 10.0%
!!! ATAATATTTTTTGTTACTGT+AGG - chr3_3:61668858-61668877 Msa0462590:three_prime_UTR 15.0%
!!! GCAAATTTTATTAAAAAACT+CGG + chr3_3:61669552-61669571 None:intergenic 15.0%
!! GTTAAAAAAAAAAAAGCAAA+TGG - chr3_3:61669573-61669592 Msa0462590:intron 15.0%
!! TTATTAAAAATGATTACAGT+TGG - chr3_3:61669727-61669746 Msa0462590:CDS 15.0%
!!! CTTATTTTTCATTTCATTTT+TGG - chr3_3:61670051-61670070 Msa0462590:intron 15.0%
!!! ATTGATTACAAATGATTTTT+AGG - chr3_3:61670139-61670158 Msa0462590:intron 15.0%
!!! TATTTTGTTATGTTCTAATT+TGG - chr3_3:61670266-61670285 Msa0462590:intron 15.0%
!!! TATTAGTTCTATTTAATCTT+AGG + chr3_3:61670326-61670345 None:intergenic 15.0%
!! ATAAAGATGATATCTTAATA+TGG + chr3_3:61670475-61670494 None:intergenic 15.0%
!!! AATGAATAGTATTTTCATTT+TGG - chr3_3:61670638-61670657 Msa0462590:intron 15.0%
!!! TTATAGAATAAGAAACATTT+TGG - chr3_3:61671059-61671078 Msa0462590:intron 15.0%
!!! ATTATTTTATGGAAATGAAT+GGG - chr3_3:61671834-61671853 Msa0462590:CDS 15.0%
!! ACTTTATGAATAAATTATTG+AGG - chr3_3:61672425-61672444 Msa0462590:CDS 15.0%
!! CTTTATGAATAAATTATTGA+GGG - chr3_3:61672426-61672445 Msa0462590:CDS 15.0%
!! TTCTGATTATTAGATAAATA+CGG - chr3_3:61672567-61672586 Msa0462590:intron 15.0%
!!! ACTATTCTATTTAATTTTGA+AGG + chr3_3:61672776-61672795 None:intergenic 15.0%
!! AAAAAATTAATCAACAAAGA+GGG + chr3_3:61672925-61672944 None:intergenic 15.0%
!! AAAAAAATTAATCAACAAAG+AGG + chr3_3:61672926-61672945 None:intergenic 15.0%
!! AATATGTGTAATTAATGTAT+TGG + chr3_3:61673737-61673756 None:intergenic 15.0%
!! CATAGAATATTACTATTTAA+AGG - chr3_3:61673759-61673778 Msa0462590:intron 15.0%
!! AATCAAATATCAAAATAAGT+TGG + chr3_3:61673911-61673930 None:intergenic 15.0%
!!! ATTTTGATATTTGATTTTTC+AGG - chr3_3:61673915-61673934 Msa0462590:intron 15.0%
!! GAAGAAGGAATATATAATAA+AGG + chr3_3:61668718-61668737 None:intergenic 20.0%
!!! TATCTTATCAACTTCTAAAA+AGG + chr3_3:61668892-61668911 None:intergenic 20.0%
!! ACACGTTTAATCTATATTAT+AGG - chr3_3:61669221-61669240 Msa0462590:intron 20.0%
!!! TTAATAAGACCATTTTTAGT+TGG + chr3_3:61669714-61669733 None:intergenic 20.0%
!! AATGCAAAATTGATTACAAA+GGG - chr3_3:61670076-61670095 Msa0462590:intron 20.0%
!!! TAATTATGAATGGATTGATT+TGG + chr3_3:61670193-61670212 None:intergenic 20.0%
!! AAATAAACTTAGTGTATGTT+TGG + chr3_3:61670234-61670253 None:intergenic 20.0%
!!! AACATACACTAAGTTTATTT+TGG - chr3_3:61670234-61670253 Msa0462590:intron 20.0%
!!! ACATACACTAAGTTTATTTT+GGG - chr3_3:61670235-61670254 Msa0462590:intron 20.0%
!!! TAAACCAAACTAGATTTTAA+AGG - chr3_3:61670390-61670409 Msa0462590:intron 20.0%
!!! TTTTCCTTTAAAATCTAGTT+TGG + chr3_3:61670397-61670416 None:intergenic 20.0%
!!! ATCTTGTTTTTTTACAACAT+TGG - chr3_3:61670535-61670554 Msa0462590:intron 20.0%
!! ATATCAACAAAGTAATAAGT+CGG + chr3_3:61671100-61671119 None:intergenic 20.0%
!!! AAAATTGCATATTTTTGTGA+AGG + chr3_3:61671222-61671241 None:intergenic 20.0%
!!! TTATTATATAGTTCGTTTTG+AGG - chr3_3:61671401-61671420 Msa0462590:intron 20.0%
!!! TATTATATAGTTCGTTTTGA+GGG - chr3_3:61671402-61671421 Msa0462590:intron 20.0%
!! AAACATTCACATATTTGAAT+AGG - chr3_3:61671705-61671724 Msa0462590:CDS 20.0%
!! TTATGATTCTTAAAATCACT+TGG - chr3_3:61671810-61671829 Msa0462590:CDS 20.0%
!! TATGATTCTTAAAATCACTT+GGG - chr3_3:61671811-61671830 Msa0462590:CDS 20.0%
!!! GATTATTTTATGGAAATGAA+TGG - chr3_3:61671833-61671852 Msa0462590:CDS 20.0%
!! CTTGAAATCAAAGAATAATT+TGG + chr3_3:61672026-61672045 None:intergenic 20.0%
!!! CAAATTATTCTTTGATTTCA+AGG - chr3_3:61672024-61672043 Msa0462590:intron 20.0%
!!! TTTTGTTTCTAGATTTCTAT+CGG + chr3_3:61672291-61672310 None:intergenic 20.0%
!! AAATCTAGAAACAAAAAATG+CGG - chr3_3:61672295-61672314 Msa0462590:intron 20.0%
!! ATTAATTACTAGAATATCAG+CGG + chr3_3:61672478-61672497 None:intergenic 20.0%
!! TCTAGTAATTAATCTTCATT+AGG - chr3_3:61672485-61672504 Msa0462590:intron 20.0%
!! CTAGTAATTAATCTTCATTA+GGG - chr3_3:61672486-61672505 Msa0462590:intron 20.0%
!! TCAGAAAAAGAAAATTTGAA+AGG + chr3_3:61672553-61672572 None:intergenic 20.0%
!! ATTTCATCAGTAACATTATT+TGG - chr3_3:61672739-61672758 Msa0462590:intron 20.0%
!! TTTCATCAGTAACATTATTT+GGG - chr3_3:61672740-61672759 Msa0462590:intron 20.0%
!!! TTTTTTTTGAAGAGACAATA+TGG - chr3_3:61672867-61672886 Msa0462590:intron 20.0%
!! TAATTGAAATGAGTTAAGTT+TGG - chr3_3:61672965-61672984 Msa0462590:intron 20.0%
!! TAACTAATATGTATCAATGT+CGG - chr3_3:61673374-61673393 Msa0462590:intron 20.0%
!!! TCAAAATAAGTTGGTTTTAA+AGG + chr3_3:61673902-61673921 None:intergenic 20.0%
!! TTCATATATCAAAGAATAGT+TGG + chr3_3:61674075-61674094 None:intergenic 20.0%
! CACACATAGTATTATACTAT+AGG - chr3_3:61668667-61668686 Msa0462590:three_prime_UTR 25.0%
! TGAAGGTTATTTAATGAAGA+AGG + chr3_3:61668733-61668752 None:intergenic 25.0%
!! TATTGTTGAAATCCTACTTT+TGG + chr3_3:61668933-61668952 None:intergenic 25.0%
! ATATAGATTAAACGTGTATC+TGG + chr3_3:61669218-61669237 None:intergenic 25.0%
!! TATATTATAGGTGCTACATT+TGG - chr3_3:61669233-61669252 Msa0462590:intron 25.0%
!!! TTTCAACTGGGTTTTAATTT+AGG - chr3_3:61669353-61669372 Msa0462590:intron 25.0%
!! TTGTTTGTTAATGGTATTGA+AGG - chr3_3:61669397-61669416 Msa0462590:intron 25.0%
!! GGTTAAAGTTTTTATGTTCT+AGG - chr3_3:61669594-61669613 Msa0462590:intron 25.0%
!!! TAAGATGTTTTGTGTTTTGA+AGG - chr3_3:61669633-61669652 Msa0462590:intron 25.0%
!!! AAGATGTTTTGTGTTTTGAA+GGG - chr3_3:61669634-61669653 Msa0462590:intron 25.0%
! TAGAGTAATTAAGCACAAAA+GGG + chr3_3:61669811-61669830 None:intergenic 25.0%
! TTAGAGTAATTAAGCACAAA+AGG + chr3_3:61669812-61669831 None:intergenic 25.0%
! GAATGCAAAATTGATTACAA+AGG - chr3_3:61670075-61670094 Msa0462590:intron 25.0%
! ATGCAAAATTGATTACAAAG+GGG - chr3_3:61670077-61670096 Msa0462590:intron 25.0%
!!! CATACACTAAGTTTATTTTG+GGG - chr3_3:61670236-61670255 Msa0462590:intron 25.0%
!! TATTGAGTAAACAAGCATTT+TGG - chr3_3:61670791-61670810 Msa0462590:intron 25.0%
! ACAAATAAAATACACAAGCA+GGG + chr3_3:61670876-61670895 None:intergenic 25.0%
!!! TATTTTTGTGAAGGAATCAT+AGG + chr3_3:61671213-61671232 None:intergenic 25.0%
! TAAAAAAAAAGAAGTTGGGA+AGG - chr3_3:61671345-61671364 Msa0462590:intron 25.0%
!!! ATTATATAGTTCGTTTTGAG+GGG - chr3_3:61671403-61671422 Msa0462590:intron 25.0%
!! GTTTAGTTTAATAGCTTCAA+TGG + chr3_3:61671442-61671461 None:intergenic 25.0%
! AAAGAGAATCTAGATTGAAA+AGG + chr3_3:61671602-61671621 None:intergenic 25.0%
!!! AATCACTTGGGATTATTTTA+TGG - chr3_3:61671823-61671842 Msa0462590:CDS 25.0%
!!! TAACCTATCTTTTGGTTTAT+CGG + chr3_3:61672075-61672094 None:intergenic 25.0%
! GAATAACAATCTAAGCTAAA+AGG - chr3_3:61672242-61672261 Msa0462590:CDS 25.0%
!!! TTTGTTTCTAGATTTCTATC+GGG + chr3_3:61672290-61672309 None:intergenic 25.0%
! ATAAATTATTGAGGGAAACT+TGG - chr3_3:61672434-61672453 Msa0462590:CDS 25.0%
! TAAATTATTGAGGGAAACTT+GGG - chr3_3:61672435-61672454 Msa0462590:CDS 25.0%
! TATAATTCCTTCTGTAAGTT+CGG - chr3_3:61672642-61672661 Msa0462590:intron 25.0%
! GTTTAACATACCGAATATAA+TGG + chr3_3:61673448-61673467 None:intergenic 25.0%
! AAAATCCTTAAAGAATGTCT+CGG + chr3_3:61673672-61673691 None:intergenic 25.0%
!!! AAAGGTATTAATGAGTGTTT+CGG - chr3_3:61673777-61673796 Msa0462590:intron 25.0%
!! TCAAAGTTATCTTTTGTCTA+TGG + chr3_3:61674156-61674175 None:intergenic 25.0%
! AGACATTTCTTAATATTCCA+AGG + chr3_3:61674322-61674341 None:intergenic 25.0%
TATAATACTATGTGTGAACG+TGG + chr3_3:61668663-61668682 None:intergenic 30.0%
!!! GTTGCTTTTTATTCTGCTTT+GGG + chr3_3:61668765-61668784 None:intergenic 30.0%
!!! TGTTGCTTTTTATTCTGCTT+TGG + chr3_3:61668766-61668785 None:intergenic 30.0%
CTATGTATCAGTGTCATATT+CGG + chr3_3:61669102-61669121 None:intergenic 30.0%
!!! TATGGACTTTGTTTTTTCAG+TGG - chr3_3:61669325-61669344 Msa0462590:intron 30.0%
! TTGTTAATGGTATTGAAGGT+AGG - chr3_3:61669401-61669420 Msa0462590:intron 30.0%
ATCCAGAAATTACAAGACAA+AGG + chr3_3:61669500-61669519 None:intergenic 30.0%
! TCTTGTAATTTCTGGATGAT+CGG - chr3_3:61669503-61669522 Msa0462590:intron 30.0%
TTATTAAAAAACTCGGTCAC+TGG + chr3_3:61669545-61669564 None:intergenic 30.0%
!!! CCATTTTTAGTTGGTTTGAA+TGG + chr3_3:61669705-61669724 None:intergenic 30.0%
CCATTCAAACCAACTAAAAA+TGG - chr3_3:61669702-61669721 Msa0462590:CDS 30.0%
AATGATTACAGTTGGAACAA+AGG - chr3_3:61669735-61669754 Msa0462590:CDS 30.0%
GAATGATTCATTAGTAGAGT+AGG + chr3_3:61669908-61669927 None:intergenic 30.0%
CAAAATAGCATGTGAATGAA+TGG - chr3_3:61669979-61669998 Msa0462590:intron 30.0%
AACAATGAGTTCTTTATCAC+AGG - chr3_3:61670582-61670601 Msa0462590:intron 30.0%
ACAATGAGTTCTTTATCACA+GGG - chr3_3:61670583-61670602 Msa0462590:intron 30.0%
ATACTATTCATTTAGCACGA+AGG + chr3_3:61670630-61670649 None:intergenic 30.0%
AAAAGCAACTTCAATCTCAA+GGG - chr3_3:61670734-61670753 Msa0462590:intron 30.0%
GACAAATAAAATACACAAGC+AGG + chr3_3:61670877-61670896 None:intergenic 30.0%
! GTCGTCAATTAGTAATTTTG+TGG + chr3_3:61670968-61670987 None:intergenic 30.0%
ACTTTGTTGATATTGCAGAT+AGG - chr3_3:61671107-61671126 Msa0462590:intron 30.0%
CTTTGTTGATATTGCAGATA+GGG - chr3_3:61671108-61671127 Msa0462590:intron 30.0%
ATTAGAAGACAATATGCAAG+TGG - chr3_3:61671248-61671267 Msa0462590:CDS 30.0%
AGTTTAATAGCTTCAATGGA+CGG + chr3_3:61671438-61671457 None:intergenic 30.0%
AAACTAAACTCTTACCTCTA+TGG - chr3_3:61671453-61671472 Msa0462590:CDS 30.0%
TATCTACTAATCTGTCCATA+AGG + chr3_3:61671484-61671503 None:intergenic 30.0%
GAATCTAGATTGAAAAGGAA+TGG + chr3_3:61671597-61671616 None:intergenic 30.0%
GATAAACCAAAAGATAGGTT+AGG - chr3_3:61672074-61672093 Msa0462590:intron 30.0%
! TTTATGCCTAACCTATCTTT+TGG + chr3_3:61672083-61672102 None:intergenic 30.0%
!!! TGCTGTTTCTTTGTCTTTTT+GGG + chr3_3:61672216-61672235 None:intergenic 30.0%
!!! TTGCTGTTTCTTTGTCTTTT+TGG + chr3_3:61672217-61672236 None:intergenic 30.0%
ATCTAAGCTAAAAGGTAAAC+AGG - chr3_3:61672250-61672269 Msa0462590:CDS 30.0%
AATTAATCTTCATTAGGGAG+AGG - chr3_3:61672491-61672510 Msa0462590:intron 30.0%
ATTCCAACCATATCTATTCT+GGG - chr3_3:61673072-61673091 Msa0462590:CDS 30.0%
! AAGTTTTCCCAGAATAGATA+TGG + chr3_3:61673082-61673101 None:intergenic 30.0%
GTATATGACAAAGTAACCAA+AGG + chr3_3:61673172-61673191 None:intergenic 30.0%
!! AATGGATTAGCCAAAGATTT+CGG - chr3_3:61673273-61673292 Msa0462590:CDS 30.0%
TCCTATAGAACTTGGTTTAA+TGG - chr3_3:61673312-61673331 Msa0462590:CDS 30.0%
TCCATTAAACCAAGTTCTAT+AGG + chr3_3:61673316-61673335 None:intergenic 30.0%
AGTGTCTATGCCATTATATT+CGG - chr3_3:61673435-61673454 Msa0462590:intron 30.0%
! CAAGTTCTTTTCTAGATGAA+AGG + chr3_3:61673637-61673656 None:intergenic 30.0%
AAATCCTTAAAGAATGTCTC+GGG + chr3_3:61673671-61673690 None:intergenic 30.0%
!!! TATTTGATTTTTCAGGTAGC+TGG - chr3_3:61673922-61673941 Msa0462590:intron 30.0%
! TTATCTTTTGTCTATGGAGT+TGG + chr3_3:61674150-61674169 None:intergenic 30.0%
ATTGAAAATGTTATAGCTGC+TGG + chr3_3:61674363-61674382 None:intergenic 30.0%
TATGTGTGAACGTGGTTATT+GGG + chr3_3:61668655-61668674 None:intergenic 35.0%
!! GCTTTGGGATATGATTATGA+AGG + chr3_3:61668750-61668769 None:intergenic 35.0%
! TGAATGAGTCTGAGATATCA+TGG + chr3_3:61668820-61668839 None:intergenic 35.0%
GTAGGATTTCAACAATATGC+AGG - chr3_3:61668936-61668955 Msa0462590:CDS 35.0%
TAACCATTAACCGCATGTAT+TGG - chr3_3:61669161-61669180 Msa0462590:intron 35.0%
TATCACAACACCAATACATG+CGG + chr3_3:61669174-61669193 None:intergenic 35.0%
! ATTATAGGTGCTACATTTGG+AGG - chr3_3:61669236-61669255 Msa0462590:intron 35.0%
! TTATAGGTGCTACATTTGGA+GGG - chr3_3:61669237-61669256 Msa0462590:intron 35.0%
!! TTTTTGGGGGTTTTTTGGAT+GGG - chr3_3:61669284-61669303 Msa0462590:intron 35.0%
!!! TTCAGTGGTTGTTTTTCAAC+TGG - chr3_3:61669340-61669359 Msa0462590:intron 35.0%
!!! TCAGTGGTTGTTTTTCAACT+GGG - chr3_3:61669341-61669360 Msa0462590:intron 35.0%
!!! CAACTGGGTTTTAATTTAGG+CGG - chr3_3:61669356-61669375 Msa0462590:intron 35.0%
! TTTAATTTAGGCGGTGATGT+TGG - chr3_3:61669365-61669384 Msa0462590:intron 35.0%
!! TGTTGGTGGTTGTTTGTTAA+TGG - chr3_3:61669388-61669407 Msa0462590:intron 35.0%
!! GTCTATTTGGGGTTTTCTTT+TGG - chr3_3:61669453-61669472 Msa0462590:intron 35.0%
GAATGAATGGTATCACAAGA+TGG - chr3_3:61669992-61670011 Msa0462590:intron 35.0%
CAATGAGTTCTTTATCACAG+GGG - chr3_3:61670584-61670603 Msa0462590:intron 35.0%
GATTAATTCATGCTTGTGTC+AGG - chr3_3:61670671-61670690 Msa0462590:intron 35.0%
AACAATGAGTTGTGCAAGTT+GGG + chr3_3:61670708-61670727 None:intergenic 35.0%
!! CTTGAGATTGAAGTTGCTTT+TGG + chr3_3:61670735-61670754 None:intergenic 35.0%
CAAAAGCAACTTCAATCTCA+AGG - chr3_3:61670733-61670752 Msa0462590:intron 35.0%
AGTAAATAGGCTAGTGTCAA+TGG - chr3_3:61671295-61671314 Msa0462590:CDS 35.0%
AGAGAAGATAGATGTTTGTG+TGG - chr3_3:61671676-61671695 Msa0462590:intron 35.0%
TAAAACTTACCCACTACAAG+TGG + chr3_3:61671783-61671802 None:intergenic 35.0%
AGTTACCTGAGACAATTTCA+GGG + chr3_3:61671964-61671983 None:intergenic 35.0%
TAGTTACCTGAGACAATTTC+AGG + chr3_3:61671965-61671984 None:intergenic 35.0%
ATTGTCTCAGGTAACTAACA+TGG - chr3_3:61671968-61671987 Msa0462590:intron 35.0%
CTTCCGATAAACCAAAAGAT+AGG - chr3_3:61672069-61672088 Msa0462590:intron 35.0%
ATATATTGAGCACGTGATAG+AGG + chr3_3:61672126-61672145 None:intergenic 35.0%
TGTATACATACACACACAAG+AGG - chr3_3:61672171-61672190 Msa0462590:intron 35.0%
!! TGTTTCTTTGTCTTTTTGGG+GGG + chr3_3:61672213-61672232 None:intergenic 35.0%
!! CTGTTTCTTTGTCTTTTTGG+GGG + chr3_3:61672214-61672233 None:intergenic 35.0%
!!! GCTGTTTCTTTGTCTTTTTG+GGG + chr3_3:61672215-61672234 None:intergenic 35.0%
GATTTCTATCGGGATACAAA+TGG + chr3_3:61672280-61672299 None:intergenic 35.0%
TACTAGAATATCAGCGGTAT+AGG + chr3_3:61672472-61672491 None:intergenic 35.0%
!! TTCCAACACTTGTTGATTCA+AGG + chr3_3:61672618-61672637 None:intergenic 35.0%
! TCATCAATCGATTCTGACTT+TGG + chr3_3:61672701-61672720 None:intergenic 35.0%
TATTCGGAAGCAAGCAAATA+TGG - chr3_3:61672826-61672845 Msa0462590:intron 35.0%
ACTCTGTCACATAAAGGAAA+TGG + chr3_3:61673024-61673043 None:intergenic 35.0%
TTGAGAACTCTGTCACATAA+AGG + chr3_3:61673030-61673049 None:intergenic 35.0%
GATTCCAACCATATCTATTC+TGG - chr3_3:61673071-61673090 Msa0462590:CDS 35.0%
TTTCCCAGAATAGATATGGT+TGG + chr3_3:61673078-61673097 None:intergenic 35.0%
GTGTAAGAGTTCTTGTATTC+AGG - chr3_3:61673112-61673131 Msa0462590:CDS 35.0%
TGACATTACAATCTCACCTT+TGG - chr3_3:61673153-61673172 Msa0462590:intron 35.0%
! AAAGATGTTTTTCTCTGCAG+TGG - chr3_3:61673204-61673223 Msa0462590:intron 35.0%
TGTGTTCAAACCGAAATCTT+TGG + chr3_3:61673286-61673305 None:intergenic 35.0%
AACTTGGTTTAATGGAAGAC+AGG - chr3_3:61673320-61673339 Msa0462590:CDS 35.0%
GTTTCGCTTACTATTCTCAT+CGG - chr3_3:61673479-61673498 Msa0462590:intron 35.0%
TTATCCTTTGCAACCATAAG+AGG - chr3_3:61673970-61673989 Msa0462590:CDS 35.0%
AAACTGTAGTGTATTCAGTC+TGG - chr3_3:61674109-61674128 Msa0462590:CDS 35.0%
AAAACTTGTCTGCACAGTCA+TGG - chr3_3:61668628-61668647 Msa0462590:three_prime_UTR 40.0%
CTATGTGTGAACGTGGTTAT+TGG + chr3_3:61668656-61668675 None:intergenic 40.0%
AGATCTGACTGAGAAGTTGT+TGG + chr3_3:61668792-61668811 None:intergenic 40.0%
! CCATTTAACCAAAGCACTAC+TGG + chr3_3:61669041-61669060 None:intergenic 40.0%
CCAGTAGTGCTTTGGTTAAA+TGG - chr3_3:61669038-61669057 Msa0462590:CDS 40.0%
GTAGTGCTTTGGTTAAATGG+AGG - chr3_3:61669041-61669060 Msa0462590:CDS 40.0%
ACACCAATACATGCGGTTAA+TGG + chr3_3:61669167-61669186 None:intergenic 40.0%
ATCTGGTGTCTGATACATGT+CGG + chr3_3:61669201-61669220 None:intergenic 40.0%
!! GTTTTTGGGGGTTTTTTGGA+TGG - chr3_3:61669283-61669302 Msa0462590:intron 40.0%
! ATGGTATTGAAGGTAGGTCT+TGG - chr3_3:61669407-61669426 Msa0462590:intron 40.0%
!!! TGGCGTTTTGGTGTCTATTT+GGG - chr3_3:61669441-61669460 Msa0462590:intron 40.0%
!! AAGACAAAGGCGTCGTATAT+AGG + chr3_3:61669487-61669506 None:intergenic 40.0%
CGCCTTTGTCTTGTAATTTC+TGG - chr3_3:61669495-61669514 Msa0462590:intron 40.0%
CAACAAAATCGCGTAGTTGT+TGG + chr3_3:61669765-61669784 None:intergenic 40.0%
!! CTGTTTCCTACTTGTTGTAG+TGG - chr3_3:61669840-61669859 Msa0462590:intron 40.0%
TGTTTGCCACTACAACAAGT+AGG + chr3_3:61669849-61669868 None:intergenic 40.0%
ACCTGTCAAATCATCGTTCA+CGG + chr3_3:61669938-61669957 None:intergenic 40.0%
! TAGCTCTATGTTATGCAGCA+AGG - chr3_3:61670508-61670527 Msa0462590:intron 40.0%
AGCTCTATGTTATGCAGCAA+GGG - chr3_3:61670509-61670528 Msa0462590:intron 40.0%
ACAATGAGTTGTGCAAGTTG+GGG + chr3_3:61670707-61670726 None:intergenic 40.0%
GAACAATGAGTTGTGCAAGT+TGG + chr3_3:61670709-61670728 None:intergenic 40.0%
ATCAAAGACGTACACATTCG+AGG + chr3_3:61670908-61670927 None:intergenic 40.0%
TCTGTGTTGAATTCCAGAAG+AGG + chr3_3:61671137-61671156 None:intergenic 40.0%
CCTATTTACTCTTGCGCAAA+CGG + chr3_3:61671285-61671304 None:intergenic 40.0%
AAATAGGCTAGTGTCAATGG+AGG - chr3_3:61671298-61671317 Msa0462590:CDS 40.0%
AGCATATGTGCTAACTCAAC+TGG - chr3_3:61671558-61671577 Msa0462590:intron 40.0%
CATATGCTTACCTTCATGTC+TGG - chr3_3:61671640-61671659 Msa0462590:intron 40.0%
TCTTGCTAAACCAGACATGA+AGG + chr3_3:61671653-61671672 None:intergenic 40.0%
! TTCATGTCTGGTTTAGCAAG+AGG - chr3_3:61671652-61671671 Msa0462590:intron 40.0%
! TCATGTCTGGTTTAGCAAGA+GGG - chr3_3:61671653-61671672 Msa0462590:intron 40.0%
CTCTTCATGCTAAGCTTGTA+GGG - chr3_3:61671744-61671763 Msa0462590:CDS 40.0%
GTTACCTGAGACAATTTCAG+GGG + chr3_3:61671963-61671982 None:intergenic 40.0%
AACTGAACCAAGAAACTCCA+AGG - chr3_3:61672323-61672342 Msa0462590:intron 40.0%
!!! CCAATCTATTTTTTCCGCGA+TGG + chr3_3:61672391-61672410 None:intergenic 40.0%
CCATCGCGGAAAAAATAGAT+TGG - chr3_3:61672388-61672407 Msa0462590:CDS 40.0%
TAATCTTCATTAGGGAGAGG+AGG - chr3_3:61672494-61672513 Msa0462590:intron 40.0%
AATCTTCATTAGGGAGAGGA+GGG - chr3_3:61672495-61672514 Msa0462590:intron 40.0%
CACCTTGAATCAACAAGTGT+TGG - chr3_3:61672613-61672632 Msa0462590:intron 40.0%
TGTTGATCCGAACTTACAGA+AGG + chr3_3:61672652-61672671 None:intergenic 40.0%
AACAAAGAGGGAAGACATAG+AGG + chr3_3:61672913-61672932 None:intergenic 40.0%
!! CTGGGAAAACTTGTTAAGTC+AGG - chr3_3:61673090-61673109 Msa0462590:CDS 40.0%
GATTCAGTATTACCGTTGCT+TGG - chr3_3:61673234-61673253 Msa0462590:intron 40.0%
TATTACCGTTGCTTGGTACA+CGG - chr3_3:61673241-61673260 Msa0462590:intron 40.0%
GGTACACGGTCTTTAGTAAA+TGG - chr3_3:61673255-61673274 Msa0462590:CDS 40.0%
CAACAGAGTCCTATAGAACT+TGG - chr3_3:61673304-61673323 Msa0462590:CDS 40.0%
TAGACCCGAGACATTCTTTA+AGG - chr3_3:61673664-61673683 Msa0462590:intron 40.0%
!!! TGATTTTTCAGGTAGCTGGA+TGG - chr3_3:61673926-61673945 Msa0462590:intron 40.0%
!!! CTGCTAAAGGCATTTTTGGA+AGG - chr3_3:61674039-61674058 Msa0462590:CDS 40.0%
AGATGCTGCAGAAAATATGC+AGG + chr3_3:61674226-61674245 None:intergenic 40.0%
TCTAGGAAGTCAACAGGTAA+AGG + chr3_3:61674290-61674309 None:intergenic 40.0%
TTCCTAGAGTTGTCAAACCT+TGG - chr3_3:61674302-61674321 Msa0462590:five_prime_UTR 40.0%
TTCCAAGGTTTGACAACTCT+AGG + chr3_3:61674307-61674326 None:intergenic 40.0%
TTACCTCAGCAGCCAAAAGT+AGG - chr3_3:61668918-61668937 Msa0462590:CDS 45.0%
!! AATCCTACTTTTGGCTGCTG+AGG + chr3_3:61668924-61668943 None:intergenic 45.0%
! TAACCAAAGCACTACTGGCT+TGG + chr3_3:61669036-61669055 None:intergenic 45.0%
!! ATTCGGTGTTTGTATCTGCG+AGG + chr3_3:61669085-61669104 None:intergenic 45.0%
TTGGAGGGATGGTGTTTCTT+TGG - chr3_3:61669252-61669271 Msa0462590:intron 45.0%
TGGAGGGATGGTGTTTCTTT+GGG - chr3_3:61669253-61669272 Msa0462590:intron 45.0%
!! GGTGGTTTTTGGGGGTTTTT+TGG - chr3_3:61669279-61669298 Msa0462590:intron 45.0%
!!! GTGGCGTTTTGGTGTCTATT+TGG - chr3_3:61669440-61669459 Msa0462590:intron 45.0%
!!! GGCGTTTTGGTGTCTATTTG+GGG - chr3_3:61669442-61669461 Msa0462590:intron 45.0%
!! ACAAAGGCGTCGTATATAGG+TGG + chr3_3:61669484-61669503 None:intergenic 45.0%
!!! GTTTTGTGTTTTGAAGGGCC+AGG - chr3_3:61669639-61669658 Msa0462590:intron 45.0%
AGTGGCAAACATGCTGTACT+TGG - chr3_3:61669858-61669877 Msa0462590:intron 45.0%
TCCGTGAACGATGATTTGAC+AGG - chr3_3:61669934-61669953 Msa0462590:CDS 45.0%
ACTAATTGACGACACTCTCG+AGG - chr3_3:61670975-61670994 Msa0462590:intron 45.0%
!! ACTCTAGAGCTGAGTATCTC+TGG - chr3_3:61671162-61671181 Msa0462590:intron 45.0%
CCGTTTGCGCAAGAGTAAAT+AGG - chr3_3:61671282-61671301 Msa0462590:CDS 45.0%
ACCTCTATGGTGACACCTTA+TGG - chr3_3:61671466-61671485 Msa0462590:CDS 45.0%
! TCCATAAGGTGTCACCATAG+AGG + chr3_3:61671470-61671489 None:intergenic 45.0%
GCTCTTCATGCTAAGCTTGT+AGG - chr3_3:61671743-61671762 Msa0462590:CDS 45.0%
TTAGCCCCTGAAATTGTCTC+AGG - chr3_3:61671956-61671975 Msa0462590:intron 45.0%
TTGAGCACGTGATAGAGGAT+AGG + chr3_3:61672121-61672140 None:intergenic 45.0%
CACACACAAGAGGAAAGACT+AGG - chr3_3:61672181-61672200 Msa0462590:intron 45.0%
GTAGCATCCTTGGAGTTTCT+TGG + chr3_3:61672333-61672352 None:intergenic 45.0%
ACACATGGTTGTAGCATCCT+TGG + chr3_3:61672343-61672362 None:intergenic 45.0%
AAGGATGCTACAACCATGTG+TGG - chr3_3:61672342-61672361 Msa0462590:intron 45.0%
GCGGATAAATTAGCCACACA+TGG + chr3_3:61672358-61672377 None:intergenic 45.0%
GCTTATCAAACCCGCTCTAA+GGG + chr3_3:61672528-61672547 None:intergenic 45.0%
AGCTTATCAAACCCGCTCTA+AGG + chr3_3:61672529-61672548 None:intergenic 45.0%
AAGTTCGGATCAACATCTCC+AGG - chr3_3:61672657-61672676 Msa0462590:intron 45.0%
! TTGCAGACGCTTGATAATCC+TGG + chr3_3:61672678-61672697 None:intergenic 45.0%
AAAGACCGTGTACCAAGCAA+CGG + chr3_3:61673249-61673268 None:intergenic 45.0%
GCTGGATGGACACAAGTATA+TGG - chr3_3:61673940-61673959 Msa0462590:intron 45.0%
TGCTCCTCTTATGGTTGCAA+AGG + chr3_3:61673977-61673996 None:intergenic 45.0%
! AGGCTCCATTTTCACAACCA+GGG - chr3_3:61674004-61674023 Msa0462590:CDS 45.0%
GATCTCCCTGGTTGTGAAAA+TGG + chr3_3:61674012-61674031 None:intergenic 45.0%
TTCACAACCAGGGAGATCAT+TGG - chr3_3:61674014-61674033 Msa0462590:CDS 45.0%
!! GAGATCATTGGTGCTGCTAA+AGG - chr3_3:61674026-61674045 Msa0462590:CDS 45.0%
!!! GGTGCTGCTAAAGGCATTTT+TGG - chr3_3:61674035-61674054 Msa0462590:CDS 45.0%
! GTATTCAGTCTGGAACCACT+AGG - chr3_3:61674119-61674138 Msa0462590:CDS 45.0%
ATGGAGTTGGCATTTCCTAG+TGG + chr3_3:61674137-61674156 None:intergenic 45.0%
! GACAACTCTAGGAAGTCAAC+AGG + chr3_3:61674296-61674315 None:intergenic 45.0%
!!! ATTTTTATTTTTTTTGTTTT+AGG - chr3_3:61670346-61670365 Msa0462590:intron 5.0%
!!! ATTTAAAATTTTCAATTTTA+AGG + chr3_3:61671909-61671928 None:intergenic 5.0%
CTTCCAAGCCAGTAGTGCTT+TGG - chr3_3:61669030-61669049 Msa0462590:CDS 50.0%
! AGGTGCTACATTTGGAGGGA+TGG - chr3_3:61669241-61669260 Msa0462590:intron 50.0%
AGGGATGGTGTTTCTTTGGG+TGG - chr3_3:61669256-61669275 Msa0462590:intron 50.0%
GGGATGGTGTTTCTTTGGGT+GGG - chr3_3:61669257-61669276 Msa0462590:intron 50.0%
GGATGGTGTTTCTTTGGGTG+GGG - chr3_3:61669258-61669277 Msa0462590:intron 50.0%
! TCTTTGGGTGGGGTGGTTTT+TGG - chr3_3:61669268-61669287 Msa0462590:intron 50.0%
! CTTTGGGTGGGGTGGTTTTT+GGG - chr3_3:61669269-61669288 Msa0462590:intron 50.0%
! TTTGGGTGGGGTGGTTTTTG+GGG - chr3_3:61669270-61669289 Msa0462590:intron 50.0%
TAGCGAGCGATGGGTGTTTA+TGG - chr3_3:61669307-61669326 Msa0462590:intron 50.0%
TTAGGCGGTGATGTTGGTGT+TGG - chr3_3:61669371-61669390 Msa0462590:intron 50.0%
GAAGGTAGGTCTTGGTTACG+TGG - chr3_3:61669415-61669434 Msa0462590:intron 50.0%
GCTCCAACAGAAGAACAACC+TGG + chr3_3:61669660-61669679 None:intergenic 50.0%
GGTTGTTCTTCTGTTGGAGC+TGG - chr3_3:61669660-61669679 Msa0462590:intron 50.0%
! TGTTGGAGCTGGAGCTTTTG+TGG - chr3_3:61669671-61669690 Msa0462590:CDS 50.0%
CTGTACTTGGAATCACCTGC+TGG - chr3_3:61669871-61669890 Msa0462590:CDS 50.0%
TTGGAATCACCTGCTGGTGT+TGG - chr3_3:61669877-61669896 Msa0462590:CDS 50.0%
TAGGAGAAACCAACACCAGC+AGG + chr3_3:61669889-61669908 None:intergenic 50.0%
GCGCTTAAATGTGTGAAGCG+CGG - chr3_3:61670813-61670832 Msa0462590:intron 50.0%
GCAGATAGGGAATCCTCTTC+TGG - chr3_3:61671121-61671140 Msa0462590:intron 50.0%
GCTGAGTATCTCTGGTCTCA+TGG - chr3_3:61671170-61671189 Msa0462590:intron 50.0%
AGCTTGTAGGGATCACCACA+TGG - chr3_3:61671756-61671775 Msa0462590:CDS 50.0%
ACCACATGGACCACTTGTAG+TGG - chr3_3:61671770-61671789 Msa0462590:CDS 50.0%
CCACATGGACCACTTGTAGT+GGG - chr3_3:61671771-61671790 Msa0462590:CDS 50.0%
CTCATGAGCTGCTCCTCTTA+TGG + chr3_3:61673986-61674005 None:intergenic 50.0%
CATAAGAGGAGCAGCTCATG+AGG - chr3_3:61673984-61674003 Msa0462590:CDS 50.0%
! GAGGCTCCATTTTCACAACC+AGG - chr3_3:61674003-61674022 Msa0462590:CDS 50.0%
!! AGCACTACTGGCTTGGAAGC+TGG + chr3_3:61669029-61669048 None:intergenic 55.0%
TGGTGTTTCTTTGGGTGGGG+TGG - chr3_3:61669261-61669280 Msa0462590:intron 55.0%
!! TTGGGTGGGGTGGTTTTTGG+GGG - chr3_3:61669271-61669290 Msa0462590:intron 55.0%
TTTGGATGGGTAGCGAGCGA+TGG - chr3_3:61669297-61669316 Msa0462590:intron 55.0%
TTGGATGGGTAGCGAGCGAT+GGG - chr3_3:61669298-61669317 Msa0462590:intron 55.0%
GGTAGGTCTTGGTTACGTGG+TGG - chr3_3:61669418-61669437 Msa0462590:intron 55.0%
AGGTCTTGGTTACGTGGTGG+TGG - chr3_3:61669421-61669440 Msa0462590:intron 55.0%
!!! GTTACGTGGTGGTGGCGTTT+TGG - chr3_3:61669429-61669448 Msa0462590:intron 55.0%
GGGCCAGGTTGTTCTTCTGT+TGG - chr3_3:61669654-61669673 Msa0462590:intron 55.0%
! GCTGGAGCTTTTGTGGAGCA+TGG - chr3_3:61669678-61669697 Msa0462590:CDS 55.0%
ATCACAGGGGAGAGCTATGC+AGG - chr3_3:61670597-61670616 Msa0462590:intron 55.0%
CCCACTACAAGTGGTCCATG+TGG + chr3_3:61671774-61671793 None:intergenic 55.0%
CCGCGATGGAGATTGTTGTG+CGG + chr3_3:61672377-61672396 None:intergenic 55.0%
CCGCACAACAATCTCCATCG+CGG - chr3_3:61672374-61672393 Msa0462590:intron 55.0%
CTTCATTAGGGAGAGGAGGG+AGG - chr3_3:61672498-61672517 Msa0462590:intron 55.0%
AGCAGCACCAATGATCTCCC+TGG + chr3_3:61674024-61674043 None:intergenic 55.0%
!! GGCGGTGATGTTGGTGTTGG+TGG - chr3_3:61669374-61669393 Msa0462590:intron 60.0%
CATTAGGGAGAGGAGGGAGG+AGG - chr3_3:61672501-61672520 Msa0462590:intron 60.0%
AGGGAGGAGGACCCTTAGAG+CGG - chr3_3:61672514-61672533 Msa0462590:intron 60.0%
GGGAGGAGGACCCTTAGAGC+GGG - chr3_3:61672515-61672534 Msa0462590:intron 65.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 61668621 61674383 61668621 ID=Msa0462590;Name=Msa0462590
chr3_3 mRNA 61668621 61674383 61668621 ID=Msa0462590-mRNA-1;Parent=Msa0462590;Name=Msa0462590-mRNA-1;_AED=0.13;_eAED=0.13;_QI=198|0.81|0.91|0.91|1|1|12|297|485
chr3_3 exon 61668621 61669067 61668621 ID=Msa0462590-mRNA-1:exon:13117;Parent=Msa0462590-mRNA-1
chr3_3 exon 61669663 61669780 61669663 ID=Msa0462590-mRNA-1:exon:13116;Parent=Msa0462590-mRNA-1
chr3_3 exon 61669871 61669963 61669871 ID=Msa0462590-mRNA-1:exon:13115;Parent=Msa0462590-mRNA-1
chr3_3 exon 61671212 61671336 61671212 ID=Msa0462590-mRNA-1:exon:13114;Parent=Msa0462590-mRNA-1
chr3_3 exon 61671425 61671511 61671425 ID=Msa0462590-mRNA-1:exon:13113;Parent=Msa0462590-mRNA-1
chr3_3 exon 61671685 61671879 61671685 ID=Msa0462590-mRNA-1:exon:13112;Parent=Msa0462590-mRNA-1
chr3_3 exon 61672241 61672311 61672241 ID=Msa0462590-mRNA-1:exon:13111;Parent=Msa0462590-mRNA-1
chr3_3 exon 61672386 61672478 61672386 ID=Msa0462590-mRNA-1:exon:13110;Parent=Msa0462590-mRNA-1
chr3_3 exon 61673049 61673144 61673049 ID=Msa0462590-mRNA-1:exon:13109;Parent=Msa0462590-mRNA-1
chr3_3 exon 61673248 61673349 61673248 ID=Msa0462590-mRNA-1:exon:13108;Parent=Msa0462590-mRNA-1
chr3_3 exon 61673576 61673659 61673576 ID=Msa0462590-mRNA-1:exon:13107;Parent=Msa0462590-mRNA-1
chr3_3 exon 61673942 61674383 61673942 ID=Msa0462590-mRNA-1:exon:13106;Parent=Msa0462590-mRNA-1
chr3_3 five_prime_UTR 61674186 61674383 61674186 ID=Msa0462590-mRNA-1:five_prime_utr;Parent=Msa0462590-mRNA-1
chr3_3 CDS 61673942 61674185 61673942 ID=Msa0462590-mRNA-1:cds;Parent=Msa0462590-mRNA-1
chr3_3 CDS 61673576 61673659 61673576 ID=Msa0462590-mRNA-1:cds;Parent=Msa0462590-mRNA-1
chr3_3 CDS 61673248 61673349 61673248 ID=Msa0462590-mRNA-1:cds;Parent=Msa0462590-mRNA-1
chr3_3 CDS 61673049 61673144 61673049 ID=Msa0462590-mRNA-1:cds;Parent=Msa0462590-mRNA-1
chr3_3 CDS 61672386 61672478 61672386 ID=Msa0462590-mRNA-1:cds;Parent=Msa0462590-mRNA-1
chr3_3 CDS 61672241 61672311 61672241 ID=Msa0462590-mRNA-1:cds;Parent=Msa0462590-mRNA-1
chr3_3 CDS 61671685 61671879 61671685 ID=Msa0462590-mRNA-1:cds;Parent=Msa0462590-mRNA-1
chr3_3 CDS 61671425 61671511 61671425 ID=Msa0462590-mRNA-1:cds;Parent=Msa0462590-mRNA-1
chr3_3 CDS 61671212 61671336 61671212 ID=Msa0462590-mRNA-1:cds;Parent=Msa0462590-mRNA-1
chr3_3 CDS 61669871 61669963 61669871 ID=Msa0462590-mRNA-1:cds;Parent=Msa0462590-mRNA-1
chr3_3 CDS 61669663 61669780 61669663 ID=Msa0462590-mRNA-1:cds;Parent=Msa0462590-mRNA-1
chr3_3 CDS 61668918 61669067 61668918 ID=Msa0462590-mRNA-1:cds;Parent=Msa0462590-mRNA-1
chr3_3 three_prime_UTR 61668621 61668917 61668621 ID=Msa0462590-mRNA-1:three_prime_utr;Parent=Msa0462590-mRNA-1
Gene Sequence

>Msa0462590

ATGATATCTCAGACTCATTCATGTTTTGTGATTGCAACAATAATATTTTTTGTTACTGTAGGAGTAAATTCCTTTTTAGAAGTTGATAAGATAAGTAGTTTACCTCAGCAGCCAAAAGTAGGATTTCAACAATATGCAGGTTACATTACAGTTGATGAAATGCAGAAAAGAGCTTTGTTTTACTACTTTGTTGAAGCAGAAGTTGAACCAGCTTCCAAGCCAGTAGTGCTTTGGTTAAATGGAGTGGTTGTTTTTCAACTGGGTTTTAATTTAGGCGGTGATGTTGGTGTTGGTGGTTGTTTGTTAATGGTATTGAAGGTAGGTCTTGGGCCAGGTTGTTCTTCTGTTGGAGCTGGAGCTTTTGTGGAGCATGGTCCATTCAAACCAACTAAAAATGGTCTTATTAAAAATGATTACAGTTGGAACAAAGTGGCAAACATGCTGTACTTGGAATCACCTGCTGGTGTTGGTTTCTCCTACTCTACTAATGAATCATTCTACGACTCCGTGAACGATGATTTGACAGCAAGGGATAATCTTGTTTTTTTACAACATTGGTTCACTAAATTCTCAGAATACAAAAACAATGAGTTCTTTATCACAGGGGAGAGCTATGCAGGTCACTATGTACCCCAACTTGCACAACTCATTGTTCAAACCAAAAGCAACTTCAATCTCAAGGGAATTGCAATAGGGAATCCTCTTCTGGAATTCAACACAGATTTCAACTCTAGAGCTGAGTATCTCTGGTCTCATGGACTGATATCAGATTCAACCTATGATTCCTTCACAAAAATATGCAATTTTTCACAAATTAGAAGACAATATGCAAGTGGCGCACTTACTACCGTTTGCGCAAGAGTAAATAGGCTAGTGTCAATGGAGATTAGTAGATATATTGATTCGTATGATGTTACTCTTGATGTGTGTCTATCAACAGTAGAACAACAAGCATATGTGCTAACTCAACTGCAAGAGGGAGAGAAGATAGATGTTTGTGTGGAAGATGAAACATTCACATATTTGAATAGGAAAGAAGTGCAAGAAGCTCTTCATGCTAAGCTTGTAGGGATCACCACATGGACCACTTGTAGTGGAGTTCTCAAATATGACATGCAAAATTTAGAGATTCCAACCATATCTATTCTGGGAAAACTTGTTAAGTCAGGTGTAAGAGTTCTTGTATTCAGTGGAGATCAAGATTCAGTATTACCGTTGCTTGGTACACGGTCTTTAGTAAATGGATTAGCCAAAGATTTCGGTTTGAACACAACAGAGTCCTATAGAACTTGGTTTAATGGAAGACAGGTAGCTGGATGGACACAAGTATATGGTGACATGTTATCCTTTGCAACCATAAGAGGAGCAGCTCATGAGGCTCCATTTTCACAACCAGGGAGATCATTGGTGCTGCTAAAGGCATTTTTGGAAGGAAAATCACTTCCAACTATTCTTTGA
Protein sequence

>Msa0462590

MISQTHSCFVIATIIFFVTVGVNSFLEVDKISSLPQQPKVGFQQYAGYITVDEMQKRALFYYFVEAEVEPASKPVVLWLNGVVVFQLGFNLGGDVGVGGCLLMVLKVGLGPGCSSVGAGAFVEHGPFKPTKNGLIKNDYSWNKVANMLYLESPAGVGFSYSTNESFYDSVNDDLTARDNLVFLQHWFTKFSEYKNNEFFITGESYAGHYVPQLAQLIVQTKSNFNLKGIAIGNPLLEFNTDFNSRAEYLWSHGLISDSTYDSFTKICNFSQIRRQYASGALTTVCARVNRLVSMEISRYIDSYDVTLDVCLSTVEQQAYVLTQLQEGEKIDVCVEDETFTYLNRKEVQEALHAKLVGITTWTTCSGVLKYDMQNLEIPTISILGKLVKSGVRVLVFSGDQDSVLPLLGTRSLVNGLAKDFGLNTTESYRTWFNGRQVAGWTQVYGDMLSFATIRGAAHEAPFSQPGRSLVLLKAFLEGKSLPTIL*