Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0210410 | XP_013464127.1 | 99.231 | 130 | 1 | 0 | 1 | 130 | 1 | 130 | 7.84e-85 | 253 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0210410 | A0A072V8K2 | 99.231 | 130 | 1 | 0 | 1 | 130 | 1 | 130 | 3.75e-85 | 253 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0044540 | Msa0210410 | 0.829118 | 6.155038e-55 | -8.615850e-47 |
| Msa0091250 | Msa0210410 | 0.822595 | 2.177414e-53 | -8.615850e-47 |
| Msa0190970 | Msa0210410 | -0.812013 | 5.248647e-51 | -8.615850e-47 |
| Msa0196020 | Msa0210410 | 0.803220 | 3.868030e-49 | -8.615850e-47 |
| Msa0210410 | Msa0268090 | -0.805653 | 1.203088e-49 | -8.615850e-47 |
| Msa0210410 | Msa0327490 | 0.953424 | 2.827907e-111 | -8.615850e-47 |
| Msa0210410 | Msa0392040 | 0.817678 | 2.910670e-52 | -8.615850e-47 |
| Msa0210410 | Msa0394410 | 0.833117 | 6.411647e-56 | -8.615850e-47 |
| Msa0210410 | Msa0478840 | 0.820881 | 5.425229e-53 | -8.615850e-47 |
| Msa0210410 | Msa0567020 | -0.809267 | 2.059356e-50 | -8.615850e-47 |
| Msa0210410 | Msa0600410 | 0.853618 | 2.120893e-61 | -8.615850e-47 |
| Msa0210410 | Msa0727190 | 0.817695 | 2.886024e-52 | -8.615850e-47 |
| Msa0210410 | Msa0784410 | -0.801321 | 9.516206e-49 | -8.615850e-47 |
| Msa0210410 | Msa0818160 | -0.800217 | 1.598235e-48 | -8.615850e-47 |
| Msa0210410 | Msa0913480 | 0.803748 | 3.006754e-49 | -8.615850e-47 |
| Msa0210410 | Msa0973600 | -0.800510 | 1.393504e-48 | -8.615850e-47 |
| Msa0210410 | Msa1033590 | 0.830172 | 3.410183e-55 | -8.615850e-47 |
| Msa0210410 | Msa1131670 | 0.801397 | 9.177638e-49 | -8.615850e-47 |
| Msa0210410 | Msa1144720 | 0.806338 | 8.633539e-50 | -8.615850e-47 |
| Msa0210410 | Msa1262990 | 0.815365 | 9.596104e-52 | -8.615850e-47 |
| Msa0210410 | Msa1267060 | -0.813206 | 2.878006e-51 | -8.615850e-47 |
| Msa0210410 | Msa1401530 | -0.812394 | 4.334802e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0210410 | MtrunA17_Chr2g0308721 | 99.231 | 130 | 1 | 0 | 1 | 130 | 1 | 130 | 7.21e-89 | 253 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0210410 | AT2G44360.1 | 80.172 | 116 | 23 | 0 | 4 | 119 | 3 | 118 | 2.20e-61 | 185 |
Find 43 sgRNAs with CRISPR-Local
Find 346 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAGTGCAACACTTTCTTTA+TGG | 0.245347 | 2_1:-50529251 | None:intergenic |
| TCTCTCCAATCTTCTCCTTC+AGG | 0.289607 | 2_1:+50523841 | Msa0210410:CDS |
| GGATAGACTATCAGCAAAAT+TGG | 0.325700 | 2_1:+50528973 | Msa0210410:CDS |
| AATTGAAACTCTTGGATTAG+AGG | 0.328866 | 2_1:+50528768 | Msa0210410:CDS |
| TAGTGCAACACTTTCTTTAT+GGG | 0.334959 | 2_1:-50529250 | None:intergenic |
| CTGGACAAAGCGAGTTAGTT+TGG | 0.345154 | 2_1:-50529443 | None:intergenic |
| CTACACTTTAAAACTTCAAC+AGG | 0.350549 | 2_1:+50529402 | Msa0210410:three_prime_UTR |
| CGTTCTAAAATTGAAACTCT+TGG | 0.363744 | 2_1:+50528760 | Msa0210410:CDS |
| GTAGCAGCTTAGTGCATGTT+TGG | 0.386171 | 2_1:+50529326 | Msa0210410:three_prime_UTR |
| AGCTTAGTGCATGTTTGGTT+TGG | 0.390133 | 2_1:+50529331 | Msa0210410:three_prime_UTR |
| AAGCTGTTTGGTTGACTTTG+AGG | 0.404571 | 2_1:-50528803 | None:intergenic |
| AACCACCTCGTCAAGCTGTT+TGG | 0.414993 | 2_1:-50528815 | None:intergenic |
| AGCTGAAAGAGCTGGGCATC+GGG | 0.435359 | 2_1:-50523818 | None:intergenic |
| TGGAGAGAAGCTGAAAGAGC+TGG | 0.456074 | 2_1:-50523826 | None:intergenic |
| ACAAAATGAACACGTGGTGC+TGG | 0.459818 | 2_1:-50529462 | None:intergenic |
| AAGAACCTGAAGGAGAAGAT+TGG | 0.461431 | 2_1:-50523846 | None:intergenic |
| AGCTGTTTGGTTGACTTTGA+GGG | 0.476036 | 2_1:-50528802 | None:intergenic |
| GGCATCGGGTTTCCCTTCCT+CGG | 0.491168 | 2_1:-50523804 | None:intergenic |
| TGTTTGGGTGTTGATGTCTC+CGG | 0.512462 | 2_1:-50529131 | None:intergenic |
| ATCAATCGCATGGCCGAGGA+AGG | 0.515364 | 2_1:+50523791 | Msa0210410:exon |
| AAGCTGAAAGAGCTGGGCAT+CGG | 0.521575 | 2_1:-50523819 | None:intergenic |
| CTCAAGAGGGACTGCACTTG+AGG | 0.526243 | 2_1:-50529037 | None:intergenic |
| GTTGGAAATAGCAAAGGAGT+TGG | 0.526515 | 2_1:+50528952 | Msa0210410:intron |
| GTTTGGGTGTTGATGTCTCC+GGG | 0.527968 | 2_1:-50529130 | None:intergenic |
| TCGGAGTTAGCAGTGATGAC+TGG | 0.528868 | 2_1:-50529082 | None:intergenic |
| TGTAAATTTACGTCTTTCCT+CGG | 0.529981 | 2_1:-50529101 | None:intergenic |
| AGAAATCAATCGCATGGCCG+AGG | 0.548066 | 2_1:+50523787 | Msa0210410:exon |
| GGAGAGAAGCTGAAAGAGCT+GGG | 0.555323 | 2_1:-50523825 | None:intergenic |
| CGTAAATTTACAGCATCTCC+CGG | 0.567732 | 2_1:+50529112 | Msa0210410:CDS |
| TACACAGTTGGAAATAGCAA+AGG | 0.568129 | 2_1:+50528946 | Msa0210410:intron |
| CTCGCATCATCAACAAGTGA+AGG | 0.584775 | 2_1:+50523748 | Msa0210410:five_prime_UTR |
| CACTTGAGGATCAGTAGCCA+TGG | 0.594675 | 2_1:-50529023 | None:intergenic |
| CATCAGCTGTACTACTCAAG+AGG | 0.595596 | 2_1:-50529051 | None:intergenic |
| AGAAAGAGAAATCAATCGCA+TGG | 0.607253 | 2_1:+50523781 | Msa0210410:exon |
| TCAATCGCATGGCCGAGGAA+GGG | 0.621711 | 2_1:+50523792 | Msa0210410:exon |
| TGAGTAGTACAGCTGATGTG+TGG | 0.643244 | 2_1:+50529056 | Msa0210410:CDS |
| TTGAGGATCAGTAGCCATGG+TGG | 0.646946 | 2_1:-50529020 | None:intergenic |
| ATCAGCTGTACTACTCAAGA+GGG | 0.672370 | 2_1:-50529050 | None:intergenic |
| GTCAACCAAACAGCTTGACG+AGG | 0.675676 | 2_1:+50528810 | Msa0210410:CDS |
| TGAGATGATATCATCCACCA+TGG | 0.693620 | 2_1:+50529006 | Msa0210410:CDS |
| AGTCATCACTGCTAACTCCG+AGG | 0.719423 | 2_1:+50529084 | Msa0210410:CDS |
| TTAGTTTGGCAATATCACAT+CGG | 0.725537 | 2_1:-50529429 | None:intergenic |
| AAGAAAACAAAATGAACACG+TGG | 0.731030 | 2_1:-50529468 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAGAAAATATTAATGATTT+TGG | - | chr2_1:50527185-50527204 | None:intergenic | 10.0% |
| !! | TCATGATATTAAAATAATTT+GGG | - | chr2_1:50527255-50527274 | None:intergenic | 10.0% |
| !! | ATCATGATATTAAAATAATT+TGG | - | chr2_1:50527256-50527275 | None:intergenic | 10.0% |
| !!! | TTGTTTGTAATTTTTCTTAA+GGG | - | chr2_1:50524246-50524265 | None:intergenic | 15.0% |
| !!! | TTTGTTTGTAATTTTTCTTA+AGG | - | chr2_1:50524247-50524266 | None:intergenic | 15.0% |
| !!! | AATTATTGGATTTTTAGAAA+TGG | - | chr2_1:50524441-50524460 | None:intergenic | 15.0% |
| !!! | TTTCTAAAAATCCAATAATT+TGG | + | chr2_1:50524441-50524460 | Msa0210410:intron | 15.0% |
| !!! | GTTTTAATTATGAAAACTTT+TGG | + | chr2_1:50524614-50524633 | Msa0210410:intron | 15.0% |
| !!! | TTAAAGTTATTCCATTATTT+TGG | + | chr2_1:50525974-50525993 | Msa0210410:intron | 15.0% |
| !! | ATTAGTAATCAATTAGATTT+GGG | + | chr2_1:50526548-50526567 | Msa0210410:intron | 15.0% |
| !!! | GTGTTATATTTAATTTTATG+TGG | - | chr2_1:50527030-50527049 | None:intergenic | 15.0% |
| !! | ATATATGTTATGGAAATTTA+TGG | - | chr2_1:50527749-50527768 | None:intergenic | 15.0% |
| !!! | TTAAAGTTATTCCATTATTT+TGG | + | chr2_1:50525974-50525993 | Msa0210410:intron | 15.0% |
| !! | ACAAAACAAGTAATTAAAAA+AGG | - | chr2_1:50528925-50528944 | None:intergenic | 15.0% |
| !! | TCCTGTAATTGTTTAATAAT+AGG | + | chr2_1:50524001-50524020 | Msa0210410:intron | 20.0% |
| !! | TCCTATTATTAAACAATTAC+AGG | - | chr2_1:50524005-50524024 | None:intergenic | 20.0% |
| !!! | AAAGTATTAAAATCTTTCAG+GGG | - | chr2_1:50524216-50524235 | None:intergenic | 20.0% |
| !!! | CAAAGTATTAAAATCTTTCA+GGG | - | chr2_1:50524217-50524236 | None:intergenic | 20.0% |
| !!! | TCAAAGTATTAAAATCTTTC+AGG | - | chr2_1:50524218-50524237 | None:intergenic | 20.0% |
| !!! | TGTTTGTAATTTTTCTTAAG+GGG | - | chr2_1:50524245-50524264 | None:intergenic | 20.0% |
| !! | AAAATAAACAATTCTCCATA+GGG | - | chr2_1:50524350-50524369 | None:intergenic | 20.0% |
| !! | AAAAATAAACAATTCTCCAT+AGG | - | chr2_1:50524351-50524370 | None:intergenic | 20.0% |
| !!! | TTTTTTAATTCTTCTTTTGC+TGG | + | chr2_1:50524366-50524385 | Msa0210410:intron | 20.0% |
| !! | AAAAACATATTGTTAAGAGA+AGG | - | chr2_1:50524680-50524699 | None:intergenic | 20.0% |
| !!! | TTAACAATATGTTTTTTACC+AGG | + | chr2_1:50524684-50524703 | Msa0210410:intron | 20.0% |
| !! | AAAAAAAAGTAGACTAATGA+AGG | - | chr2_1:50524828-50524847 | None:intergenic | 20.0% |
| !! | CCTAATACTAGAATTATTTA+CGG | - | chr2_1:50525186-50525205 | None:intergenic | 20.0% |
| !! | TAAATCTGTAAAATACTGTT+AGG | - | chr2_1:50525578-50525597 | None:intergenic | 20.0% |
| !!! | AACAGTATTTTACAGATTTA+TGG | + | chr2_1:50525578-50525597 | Msa0210410:intron | 20.0% |
| !! | TAACATTGTTTCAAATCAAA+GGG | - | chr2_1:50525761-50525780 | None:intergenic | 20.0% |
| !! | ATAACATTGTTTCAAATCAA+AGG | - | chr2_1:50525762-50525781 | None:intergenic | 20.0% |
| !!! | TTTGATTTGAAACAATGTTA+TGG | + | chr2_1:50525761-50525780 | Msa0210410:intron | 20.0% |
| !! | ATGTATATGATTATAACCTT+TGG | - | chr2_1:50525865-50525884 | None:intergenic | 20.0% |
| !!! | TTTAGTATTTTGAAAATGGT+GGG | - | chr2_1:50526016-50526035 | None:intergenic | 20.0% |
| !!! | ATTTAGTATTTTGAAAATGG+TGG | - | chr2_1:50526017-50526036 | None:intergenic | 20.0% |
| !!! | GTGATTTAGTATTTTGAAAA+TGG | - | chr2_1:50526020-50526039 | None:intergenic | 20.0% |
| !! | AATACTAAATCACATAAATC+CGG | + | chr2_1:50526027-50526046 | Msa0210410:intron | 20.0% |
| !! | AAACTTAACTTACTAAGTAA+TGG | - | chr2_1:50526093-50526112 | None:intergenic | 20.0% |
| !! | CAAATCTAATTGATTACTAA+TGG | - | chr2_1:50526549-50526568 | None:intergenic | 20.0% |
| !! | CATTAGTAATCAATTAGATT+TGG | + | chr2_1:50526547-50526566 | Msa0210410:intron | 20.0% |
| !! | ATACATTGAAGACATTATTA+GGG | - | chr2_1:50526586-50526605 | None:intergenic | 20.0% |
| !! | AATACATTGAAGACATTATT+AGG | - | chr2_1:50526587-50526606 | None:intergenic | 20.0% |
| !! | GTTAAATATTGTTATAGCAA+AGG | - | chr2_1:50526850-50526869 | None:intergenic | 20.0% |
| !! | ATTCAATGTATGATATATCT+TGG | - | chr2_1:50526914-50526933 | None:intergenic | 20.0% |
| !! | CATGATAATATGAAAAGTAA+TGG | - | chr2_1:50527293-50527312 | None:intergenic | 20.0% |
| !! | AATATGTTAGATTTAACATG+TGG | - | chr2_1:50527518-50527537 | None:intergenic | 20.0% |
| !! | GTTTATGTTAAATTTACATG+TGG | - | chr2_1:50527704-50527723 | None:intergenic | 20.0% |
| !!! | CCTTTTATGAATATATGTTA+TGG | - | chr2_1:50527759-50527778 | None:intergenic | 20.0% |
| !! | CCATAACATATATTCATAAA+AGG | + | chr2_1:50527756-50527775 | Msa0210410:intron | 20.0% |
| !! | TATGATTTACTTGTGATTAA+TGG | - | chr2_1:50527848-50527867 | None:intergenic | 20.0% |
| !! | TAAATCTGTAAAATACTGTT+AGG | - | chr2_1:50525578-50525597 | None:intergenic | 20.0% |
| !!! | AACAGTATTTTACAGATTTA+TGG | + | chr2_1:50525578-50525597 | Msa0210410:intron | 20.0% |
| !! | TAACATTGTTTCAAATCAAA+GGG | - | chr2_1:50525761-50525780 | None:intergenic | 20.0% |
| !! | ATAACATTGTTTCAAATCAA+AGG | - | chr2_1:50525762-50525781 | None:intergenic | 20.0% |
| !!! | TTTGATTTGAAACAATGTTA+TGG | + | chr2_1:50525761-50525780 | Msa0210410:intron | 20.0% |
| !! | ATGTATATGATTATAACCTT+TGG | - | chr2_1:50525865-50525884 | None:intergenic | 20.0% |
| !! | ATGAAATGTTAATCAAGAAA+TGG | - | chr2_1:50528857-50528876 | None:intergenic | 20.0% |
| !! | ACAAGTAATTAAAAAAGGAA+AGG | - | chr2_1:50528920-50528939 | None:intergenic | 20.0% |
| !!! | TTTTCTTATCGTTGAATATA+TGG | + | chr2_1:50529182-50529201 | Msa0210410:three_prime_UTR | 20.0% |
| !!! | TTTTCTTTGCAAATTTGAAA+TGG | + | chr2_1:50529484-50529503 | Msa0210410:three_prime_UTR | 20.0% |
| ! | AATAATCAACAGATAGATCT+TGG | - | chr2_1:50523909-50523928 | None:intergenic | 25.0% |
| ! | GTCGAGACTTATTATTATTA+AGG | + | chr2_1:50524055-50524074 | Msa0210410:intron | 25.0% |
| ! | GAGACTTATTATTATTAAGG+AGG | + | chr2_1:50524058-50524077 | Msa0210410:intron | 25.0% |
| !!! | GAATATGCGATTTTAAGTTT+TGG | + | chr2_1:50524308-50524327 | Msa0210410:intron | 25.0% |
| ! | TTAACAATACAAATTCTCAG+TGG | - | chr2_1:50524928-50524947 | None:intergenic | 25.0% |
| ! | CTGAGAATTTGTATTGTTAA+TGG | + | chr2_1:50524928-50524947 | Msa0210410:intron | 25.0% |
| ! | CCGTAAATAATTCTAGTATT+AGG | + | chr2_1:50525183-50525202 | Msa0210410:intron | 25.0% |
| ! | TCAAGATATACAACAATCTT+TGG | - | chr2_1:50525342-50525361 | None:intergenic | 25.0% |
| ! | TGTTGTATATCTTGATTGTT+TGG | + | chr2_1:50525347-50525366 | Msa0210410:intron | 25.0% |
| ! | GTTGTATATCTTGATTGTTT+GGG | + | chr2_1:50525348-50525367 | Msa0210410:intron | 25.0% |
| !! | GCATAACAATTAAACTTTTC+AGG | - | chr2_1:50525395-50525414 | None:intergenic | 25.0% |
| ! | ACTATAAATGCTTGACATTT+GGG | - | chr2_1:50525705-50525724 | None:intergenic | 25.0% |
| ! | AACATTGTTTCAAATCAAAG+GGG | - | chr2_1:50525760-50525779 | None:intergenic | 25.0% |
| ! | TGATTATAACCTTTGACAAA+GGG | - | chr2_1:50525799-50525818 | None:intergenic | 25.0% |
| ! | ATGATTATAACCTTTGACAA+AGG | - | chr2_1:50525800-50525819 | None:intergenic | 25.0% |
| !!! | TTAGTATTTTGAAAATGGTG+GGG | - | chr2_1:50526015-50526034 | None:intergenic | 25.0% |
| ! | ATAACTTACACATAGAATCT+CGG | + | chr2_1:50526177-50526196 | Msa0210410:intron | 25.0% |
| ! | CTCTTAAATTCTCATGAAAA+GGG | - | chr2_1:50526260-50526279 | None:intergenic | 25.0% |
| ! | ACTCTTAAATTCTCATGAAA+AGG | - | chr2_1:50526261-50526280 | None:intergenic | 25.0% |
| ! | ATCTAATTGATTACTAATGG+TGG | - | chr2_1:50526546-50526565 | None:intergenic | 25.0% |
| ! | TATTCTCATAACTATGTCTA+TGG | + | chr2_1:50526718-50526737 | Msa0210410:intron | 25.0% |
| ! | ATAACCAAACTTCATAAGAT+GGG | + | chr2_1:50526981-50527000 | Msa0210410:intron | 25.0% |
| !!! | TGTAAGTTGATATATGTTCA+TGG | - | chr2_1:50527217-50527236 | None:intergenic | 25.0% |
| ! | TAAATTGCCAAAATATCAAG+TGG | - | chr2_1:50527386-50527405 | None:intergenic | 25.0% |
| ! | ATAATACGTCATCACTTATA+TGG | + | chr2_1:50527588-50527607 | Msa0210410:intron | 25.0% |
| !! | TACATTTTCATTCATGACTA+CGG | - | chr2_1:50527799-50527818 | None:intergenic | 25.0% |
| ! | TCAAGATATACAACAATCTT+TGG | - | chr2_1:50525342-50525361 | None:intergenic | 25.0% |
| ! | TGTTGTATATCTTGATTGTT+TGG | + | chr2_1:50525347-50525366 | Msa0210410:intron | 25.0% |
| ! | GTTGTATATCTTGATTGTTT+GGG | + | chr2_1:50525348-50525367 | Msa0210410:intron | 25.0% |
| !! | GCATAACAATTAAACTTTTC+AGG | - | chr2_1:50525395-50525414 | None:intergenic | 25.0% |
| ! | ACTATAAATGCTTGACATTT+GGG | - | chr2_1:50525705-50525724 | None:intergenic | 25.0% |
| ! | AACATTGTTTCAAATCAAAG+GGG | - | chr2_1:50525760-50525779 | None:intergenic | 25.0% |
| ! | TGATTATAACCTTTGACAAA+GGG | - | chr2_1:50525799-50525818 | None:intergenic | 25.0% |
| ! | ATGATTATAACCTTTGACAA+AGG | - | chr2_1:50525800-50525819 | None:intergenic | 25.0% |
| ! | TTGGTAAGAAATTAAACTAC+TGG | - | chr2_1:50528658-50528677 | None:intergenic | 25.0% |
| ! | TATCTAATGATAACATCTGT+AGG | + | chr2_1:50528702-50528721 | Msa0210410:intron | 25.0% |
| ! | TAGTGCAAAAGATAAAAAAG+AGG | + | chr2_1:50529290-50529309 | Msa0210410:three_prime_UTR | 25.0% |
| TGAAATTGAAAAGAACCTGA+AGG | - | chr2_1:50523859-50523878 | None:intergenic | 30.0% | |
| !! | TTGTTTGATCAGTTTGGTTT+TGG | - | chr2_1:50524151-50524170 | None:intergenic | 30.0% |
| ! | TTGTTCTTGTTTGATCAGTT+TGG | - | chr2_1:50524157-50524176 | None:intergenic | 30.0% |
| TGCAGTATAGTACTTTCTAA+AGG | + | chr2_1:50524503-50524522 | Msa0210410:intron | 30.0% | |
| TTTCATGTATTTGCAACAGA+TGG | + | chr2_1:50524560-50524579 | Msa0210410:intron | 30.0% | |
| !!! | CTGTGTTTGGTTTTTAACTT+TGG | + | chr2_1:50524732-50524751 | Msa0210410:intron | 30.0% |
| AGTATTACAACAAAAAGCTG+TGG | - | chr2_1:50524888-50524907 | None:intergenic | 30.0% | |
| GTTGTAATACTAGTGATCTT+TGG | + | chr2_1:50524897-50524916 | Msa0210410:intron | 30.0% | |
| TTCTTGTCTTAAAGCCTAAA+AGG | + | chr2_1:50524980-50524999 | Msa0210410:intron | 30.0% | |
| GTTAAGTGAAATGAAGATCA+TGG | - | chr2_1:50525062-50525081 | None:intergenic | 30.0% | |
| CTAGAATTATTTACGGAATC+AGG | - | chr2_1:50525179-50525198 | None:intergenic | 30.0% | |
| TAGTATTAGGCATTTAGACT+TGG | + | chr2_1:50525196-50525215 | Msa0210410:intron | 30.0% | |
| TCCAATATACAGTTATTGGT+GGG | - | chr2_1:50525472-50525491 | None:intergenic | 30.0% | |
| ATCCAATATACAGTTATTGG+TGG | - | chr2_1:50525473-50525492 | None:intergenic | 30.0% | |
| TGCATCCAATATACAGTTAT+TGG | - | chr2_1:50525476-50525495 | None:intergenic | 30.0% | |
| ACTGTATATTGGATGCAATA+AGG | + | chr2_1:50525479-50525498 | Msa0210410:intron | 30.0% | |
| CACTATAAATGCTTGACATT+TGG | - | chr2_1:50525706-50525725 | None:intergenic | 30.0% | |
| ATTAAACATCCCTTTGTCAA+AGG | + | chr2_1:50525787-50525806 | Msa0210410:intron | 30.0% | |
| ATACACTTGAATCAATGCAA+AGG | + | chr2_1:50525820-50525839 | Msa0210410:intron | 30.0% | |
| GATTATAACCTTTGGCAAAA+GGG | - | chr2_1:50525857-50525876 | None:intergenic | 30.0% | |
| TGATTATAACCTTTGGCAAA+AGG | - | chr2_1:50525858-50525877 | None:intergenic | 30.0% | |
| TGGGAATCATTCATATACAT+TGG | - | chr2_1:50525933-50525952 | None:intergenic | 30.0% | |
| CAAAAGTTGTAACTCTTCAT+GGG | - | chr2_1:50525952-50525971 | None:intergenic | 30.0% | |
| TCAAAAGTTGTAACTCTTCA+TGG | - | chr2_1:50525953-50525972 | None:intergenic | 30.0% | |
| !! | GTTGGTGATTTCCAAAATAA+TGG | - | chr2_1:50525988-50526007 | None:intergenic | 30.0% |
| !! | TAGTATTTTGAAAATGGTGG+GGG | - | chr2_1:50526014-50526033 | None:intergenic | 30.0% |
| CACTTGTTCTAATGAATAGT+TGG | - | chr2_1:50526154-50526173 | None:intergenic | 30.0% | |
| CTTACAAGTCTCTTTATCAA+TGG | - | chr2_1:50526205-50526224 | None:intergenic | 30.0% | |
| TGTAAGATGACACATTAAGA+AGG | + | chr2_1:50526219-50526238 | Msa0210410:intron | 30.0% | |
| GACATATAGCATATATTTGC+TGG | - | chr2_1:50526366-50526385 | None:intergenic | 30.0% | |
| TATGCTATATGTCCATTAAG+AGG | + | chr2_1:50526373-50526392 | Msa0210410:intron | 30.0% | |
| TTGGACCATAAGAAGAAAAA+GGG | - | chr2_1:50526413-50526432 | None:intergenic | 30.0% | |
| ATTTGACGAAATGATTGACA+AGG | - | chr2_1:50526635-50526654 | None:intergenic | 30.0% | |
| CATAACCAAACTTCATAAGA+TGG | + | chr2_1:50526980-50526999 | Msa0210410:intron | 30.0% | |
| TAATCCCATCTTATGAAGTT+TGG | - | chr2_1:50526988-50527007 | None:intergenic | 30.0% | |
| ! | AAAGCAACCACTTGATATTT+TGG | + | chr2_1:50527376-50527395 | Msa0210410:intron | 30.0% |
| ! | TGATTAATGGCTGCAATTTT+TGG | - | chr2_1:50527835-50527854 | None:intergenic | 30.0% |
| AAATCGAACCTAAAGATTGT+TGG | + | chr2_1:50527867-50527886 | Msa0210410:intron | 30.0% | |
| TCCAATATACAGTTATTGGT+GGG | - | chr2_1:50525472-50525491 | None:intergenic | 30.0% | |
| ATCCAATATACAGTTATTGG+TGG | - | chr2_1:50525473-50525492 | None:intergenic | 30.0% | |
| TGCATCCAATATACAGTTAT+TGG | - | chr2_1:50525476-50525495 | None:intergenic | 30.0% | |
| ACTGTATATTGGATGCAATA+AGG | + | chr2_1:50525479-50525498 | Msa0210410:intron | 30.0% | |
| CACTATAAATGCTTGACATT+TGG | - | chr2_1:50525706-50525725 | None:intergenic | 30.0% | |
| ATTAAACATCCCTTTGTCAA+AGG | + | chr2_1:50525787-50525806 | Msa0210410:intron | 30.0% | |
| ATACACTTGAATCAATGCAA+AGG | + | chr2_1:50525820-50525839 | Msa0210410:intron | 30.0% | |
| GATTATAACCTTTGGCAAAA+GGG | - | chr2_1:50525857-50525876 | None:intergenic | 30.0% | |
| TGATTATAACCTTTGGCAAA+AGG | - | chr2_1:50525858-50525877 | None:intergenic | 30.0% | |
| TGGGAATCATTCATATACAT+TGG | - | chr2_1:50525933-50525952 | None:intergenic | 30.0% | |
| CAAAAGTTGTAACTCTTCAT+GGG | - | chr2_1:50525952-50525971 | None:intergenic | 30.0% | |
| TCAAAAGTTGTAACTCTTCA+TGG | - | chr2_1:50525953-50525972 | None:intergenic | 30.0% | |
| !! | GTTGGTGATTTCCAAAATAA+TGG | - | chr2_1:50525988-50526007 | None:intergenic | 30.0% |
| !! | CGTTCTAAAATTGAAACTCT+TGG | + | chr2_1:50528760-50528779 | Msa0210410:CDS | 30.0% |
| ! | AATTGAAACTCTTGGATTAG+AGG | + | chr2_1:50528768-50528787 | Msa0210410:CDS | 30.0% |
| !!! | ACTTGTTTTGTTTACACAGT+TGG | + | chr2_1:50528934-50528953 | Msa0210410:intron | 30.0% |
| TGTAAATTTACGTCTTTCCT+CGG | - | chr2_1:50529104-50529123 | None:intergenic | 30.0% | |
| TAGTGCAACACTTTCTTTAT+GGG | - | chr2_1:50529253-50529272 | None:intergenic | 30.0% | |
| ATAGTGCAACACTTTCTTTA+TGG | - | chr2_1:50529254-50529273 | None:intergenic | 30.0% | |
| ! | TGTAGTTTTTGCAGAAAACA+TGG | - | chr2_1:50529387-50529406 | None:intergenic | 30.0% |
| !! | CTACACTTTAAAACTTCAAC+AGG | + | chr2_1:50529402-50529421 | Msa0210410:three_prime_UTR | 30.0% |
| ! | TTAGTTTGGCAATATCACAT+CGG | - | chr2_1:50529432-50529451 | None:intergenic | 30.0% |
| AAGAAAACAAAATGAACACG+TGG | - | chr2_1:50529471-50529490 | None:intergenic | 30.0% | |
| AGAAAGAGAAATCAATCGCA+TGG | + | chr2_1:50523781-50523800 | Msa0210410:exon | 35.0% | |
| ! | GTTCAAATACTGATTGCATC+AGG | + | chr2_1:50523961-50523980 | Msa0210410:intron | 35.0% |
| TCACACATCAATCAAAGCAT+TGG | - | chr2_1:50524111-50524130 | None:intergenic | 35.0% | |
| CGATATTTGTTCATCCAGTT+CGG | + | chr2_1:50524179-50524198 | Msa0210410:intron | 35.0% | |
| AATCTTTCAGGGGTCAAATT+GGG | - | chr2_1:50524206-50524225 | None:intergenic | 35.0% | |
| AAATCTTTCAGGGGTCAAAT+TGG | - | chr2_1:50524207-50524226 | None:intergenic | 35.0% | |
| AAACAATTCTCCATAGGGAA+AGG | - | chr2_1:50524345-50524364 | None:intergenic | 35.0% | |
| TCACTACACAGCCAAATTAT+TGG | - | chr2_1:50524455-50524474 | None:intergenic | 35.0% | |
| AAAGGACAAATACAGTTGTC+TGG | + | chr2_1:50524521-50524540 | Msa0210410:intron | 35.0% | |
| ! | TTTACCAGGCTATTGATTGA+TGG | + | chr2_1:50524698-50524717 | Msa0210410:intron | 35.0% |
| ! | AACAATCAATGTGTTTTCCC+CGG | + | chr2_1:50524786-50524805 | Msa0210410:intron | 35.0% |
| AGGATAACCGATAATTAGAC+CGG | - | chr2_1:50524808-50524827 | None:intergenic | 35.0% | |
| TGAGAAGACGAATAGAAGTT+TGG | - | chr2_1:50524853-50524872 | None:intergenic | 35.0% | |
| !!! | AGGCATGTGTTATTTTCAAC+CGG | - | chr2_1:50525033-50525052 | None:intergenic | 35.0% |
| ! | AATGAAGATCATGGACTACT+AGG | - | chr2_1:50525053-50525072 | None:intergenic | 35.0% |
| ATTTACGGAATCAGGATCAA+TGG | - | chr2_1:50525171-50525190 | None:intergenic | 35.0% | |
| TTTCTGTTGGAACTTGTGTT+GGG | + | chr2_1:50525250-50525269 | Msa0210410:intron | 35.0% | |
| AGTCATCTTCATCATCTTCT+TGG | - | chr2_1:50525296-50525315 | None:intergenic | 35.0% | |
| TATCTTGATTGTTTGGGAAG+AGG | + | chr2_1:50525354-50525373 | Msa0210410:intron | 35.0% | |
| !!! | AACTTTTCAGGTTTCAAGTG+CGG | - | chr2_1:50525383-50525402 | None:intergenic | 35.0% |
| CATGTAAACTCAAAGCGTAT+GGG | + | chr2_1:50525414-50525433 | Msa0210410:intron | 35.0% | |
| ATGTAAACTCAAAGCGTATG+GGG | + | chr2_1:50525415-50525434 | Msa0210410:intron | 35.0% | |
| ATCGAACCTAAAGGTTAGTA+TGG | - | chr2_1:50525444-50525463 | None:intergenic | 35.0% | |
| CAATATACAGTTATTGGTGG+GGG | - | chr2_1:50525470-50525489 | None:intergenic | 35.0% | |
| CCAATATACAGTTATTGGTG+GGG | - | chr2_1:50525471-50525490 | None:intergenic | 35.0% | |
| CTCATGCATTAGAGAATTGA+TGG | + | chr2_1:50525614-50525633 | Msa0210410:intron | 35.0% | |
| TGCATTAGAGAATTGATGGA+TGG | + | chr2_1:50525618-50525637 | Msa0210410:intron | 35.0% | |
| ! | GGTTTAGAGTAAGAGAATGA+TGG | + | chr2_1:50525639-50525658 | Msa0210410:intron | 35.0% |
| ! | GGTGTTTTCTCTCATATGAA+GGG | - | chr2_1:50525739-50525758 | None:intergenic | 35.0% |
| AATTCCATGCCTTCAGATAA+TGG | + | chr2_1:50526051-50526070 | Msa0210410:intron | 35.0% | |
| TCATTCCCAAATAGTATGGT+AGG | + | chr2_1:50526117-50526136 | Msa0210410:intron | 35.0% | |
| GAAAAGGGATATATGACACA+AGG | - | chr2_1:50526245-50526264 | None:intergenic | 35.0% | |
| ACCTATGTGAGAATGAAGTT+TGG | - | chr2_1:50526309-50526328 | None:intergenic | 35.0% | |
| CTCACATAGGTAGACTATAT+CGG | + | chr2_1:50526318-50526337 | Msa0210410:intron | 35.0% | |
| TTGCTGGAATGCATACTTAT+GGG | - | chr2_1:50526350-50526369 | None:intergenic | 35.0% | |
| TTTGCTGGAATGCATACTTA+TGG | - | chr2_1:50526351-50526370 | None:intergenic | 35.0% | |
| ! | TCCTACCCTTTTTCTTCTTA+TGG | + | chr2_1:50526405-50526424 | Msa0210410:intron | 35.0% |
| ACCATAAGAAGAAAAAGGGT+AGG | - | chr2_1:50526409-50526428 | None:intergenic | 35.0% | |
| CTTGGACCATAAGAAGAAAA+AGG | - | chr2_1:50526414-50526433 | None:intergenic | 35.0% | |
| TGACAATAGATACATCCCAA+GGG | - | chr2_1:50526446-50526465 | None:intergenic | 35.0% | |
| TTGACAATAGATACATCCCA+AGG | - | chr2_1:50526447-50526466 | None:intergenic | 35.0% | |
| TGAAGACATTATTAGGGATG+TGG | - | chr2_1:50526580-50526599 | None:intergenic | 35.0% | |
| TTGACAAGGAATGATGTCTT+TGG | - | chr2_1:50526621-50526640 | None:intergenic | 35.0% | |
| ! | TGTCATGGTTTGATGATAGT+TGG | - | chr2_1:50526773-50526792 | None:intergenic | 35.0% |
| ! | CAATTGACAAAAGTGTGTCA+TGG | - | chr2_1:50526788-50526807 | None:intergenic | 35.0% |
| CACAAGTTCCAACAATCTTT+AGG | - | chr2_1:50527878-50527897 | None:intergenic | 35.0% | |
| AAGATTGTTGGAACTTGTGT+TGG | + | chr2_1:50527879-50527898 | Msa0210410:intron | 35.0% | |
| AGATTGTTGGAACTTGTGTT+GGG | + | chr2_1:50527880-50527899 | Msa0210410:intron | 35.0% | |
| AGTCATCTTCATCATCTTCT+TGG | - | chr2_1:50525296-50525315 | None:intergenic | 35.0% | |
| TATCTTGATTGTTTGGGAAG+AGG | + | chr2_1:50525354-50525373 | Msa0210410:intron | 35.0% | |
| !!! | AACTTTTCAGGTTTCAAGTG+CGG | - | chr2_1:50525383-50525402 | None:intergenic | 35.0% |
| CATGTAAACTCAAAGCGTAT+GGG | + | chr2_1:50525414-50525433 | Msa0210410:intron | 35.0% | |
| ATGTAAACTCAAAGCGTATG+GGG | + | chr2_1:50525415-50525434 | Msa0210410:intron | 35.0% | |
| ATCGAACCTAAAGGTTAGTA+TGG | - | chr2_1:50525444-50525463 | None:intergenic | 35.0% | |
| CAATATACAGTTATTGGTGG+GGG | - | chr2_1:50525470-50525489 | None:intergenic | 35.0% | |
| CCAATATACAGTTATTGGTG+GGG | - | chr2_1:50525471-50525490 | None:intergenic | 35.0% | |
| CTCATGCATTAGAGAATTGA+TGG | + | chr2_1:50525614-50525633 | Msa0210410:intron | 35.0% | |
| TGCATTAGAGAATTGATGGA+TGG | + | chr2_1:50525618-50525637 | Msa0210410:intron | 35.0% | |
| ! | GGTTTAGAGTAAGAGAATGA+TGG | + | chr2_1:50525639-50525658 | Msa0210410:intron | 35.0% |
| ! | GGTGTTTTCTCTCATATGAA+GGG | - | chr2_1:50525739-50525758 | None:intergenic | 35.0% |
| ATTGCATGTCTCTAATCTGA+TGG | + | chr2_1:50528875-50528894 | Msa0210410:intron | 35.0% | |
| TACACAGTTGGAAATAGCAA+AGG | + | chr2_1:50528946-50528965 | Msa0210410:intron | 35.0% | |
| GGATAGACTATCAGCAAAAT+TGG | + | chr2_1:50528973-50528992 | Msa0210410:CDS | 35.0% | |
| ! | AGAGTTTTCTGCATCTGTTT+GGG | - | chr2_1:50529149-50529168 | None:intergenic | 35.0% |
| ! | TAGAGTTTTCTGCATCTGTT+TGG | - | chr2_1:50529150-50529169 | None:intergenic | 35.0% |
| AAGAACCTGAAGGAGAAGAT+TGG | - | chr2_1:50523849-50523868 | None:intergenic | 40.0% | |
| !!! | AGCATTGGTGTGAGTTTTGT+CGG | - | chr2_1:50524096-50524115 | None:intergenic | 40.0% |
| AATCGCATATTCACGCTAGT+TGG | - | chr2_1:50524300-50524319 | None:intergenic | 40.0% | |
| TATGCATTGTCCTTTCCCTA+TGG | + | chr2_1:50524332-50524351 | Msa0210410:intron | 40.0% | |
| CTATACTGCATGATTGCACA+GGG | - | chr2_1:50524493-50524512 | None:intergenic | 40.0% | |
| ACTATACTGCATGATTGCAC+AGG | - | chr2_1:50524494-50524513 | None:intergenic | 40.0% | |
| CATGAAAAGTGACATCGCAA+GGG | - | chr2_1:50524547-50524566 | None:intergenic | 40.0% | |
| ACATGAAAAGTGACATCGCA+AGG | - | chr2_1:50524548-50524567 | None:intergenic | 40.0% | |
| CAATCCATCAATCAATAGCC+TGG | - | chr2_1:50524705-50524724 | None:intergenic | 40.0% | |
| GGATTGATATGAGCTGTGTT+TGG | + | chr2_1:50524719-50524738 | Msa0210410:intron | 40.0% | |
| ! | GTTTTCCCCGGTCTAATTAT+CGG | + | chr2_1:50524798-50524817 | Msa0210410:intron | 40.0% |
| GATAACCGATAATTAGACCG+GGG | - | chr2_1:50524806-50524825 | None:intergenic | 40.0% | |
| GGATAACCGATAATTAGACC+GGG | - | chr2_1:50524807-50524826 | None:intergenic | 40.0% | |
| ! | AGGGCTGGATTAATGTTTTC+CGG | + | chr2_1:50525011-50525030 | Msa0210410:intron | 40.0% |
| ACTAAGCATGCAGTTTCTGT+TGG | + | chr2_1:50525237-50525256 | Msa0210410:intron | 40.0% | |
| GTTTCTGTTGGAACTTGTGT+TGG | + | chr2_1:50525249-50525268 | Msa0210410:intron | 40.0% | |
| TTCTGTTGGAACTTGTGTTG+GGG | + | chr2_1:50525251-50525270 | Msa0210410:intron | 40.0% | |
| GCATGTAAACTCAAAGCGTA+TGG | + | chr2_1:50525413-50525432 | Msa0210410:intron | 40.0% | |
| CCCCACCAATAACTGTATAT+TGG | + | chr2_1:50525468-50525487 | Msa0210410:intron | 40.0% | |
| TGGATGCAATAAGGAATGAC+CGG | + | chr2_1:50525488-50525507 | Msa0210410:intron | 40.0% | |
| GAACTCATAGTATCCTGAAG+GGG | - | chr2_1:50525519-50525538 | None:intergenic | 40.0% | |
| GGAACTCATAGTATCCTGAA+GGG | - | chr2_1:50525520-50525539 | None:intergenic | 40.0% | |
| AGGAACTCATAGTATCCTGA+AGG | - | chr2_1:50525521-50525540 | None:intergenic | 40.0% | |
| ATACTGTTAGGAGATACGCT+TGG | - | chr2_1:50525566-50525585 | None:intergenic | 40.0% | |
| CTAATGCATGAGTGAATTGC+TGG | - | chr2_1:50525606-50525625 | None:intergenic | 40.0% | |
| CTTGACATTTGGGCATTAGT+TGG | - | chr2_1:50525695-50525714 | None:intergenic | 40.0% | |
| ! | GGGTGTTTTCTCTCATATGA+AGG | - | chr2_1:50525740-50525759 | None:intergenic | 40.0% |
| ! | ATTAAGCACCCTTTTGCCAA+AGG | + | chr2_1:50525846-50525865 | Msa0210410:intron | 40.0% |
| ! | ATCTGAAGGCATGGAATTTC+CGG | - | chr2_1:50526049-50526068 | None:intergenic | 40.0% |
| GATACCATTATCTGAAGGCA+TGG | - | chr2_1:50526058-50526077 | None:intergenic | 40.0% | |
| TCGCTCATTCCCAAATAGTA+TGG | + | chr2_1:50526113-50526132 | Msa0210410:intron | 40.0% | |
| GCTTGCCTACCATACTATTT+GGG | - | chr2_1:50526125-50526144 | None:intergenic | 40.0% | |
| AGCTTGCCTACCATACTATT+TGG | - | chr2_1:50526126-50526145 | None:intergenic | 40.0% | |
| GCCAAACTTCATTCTCACAT+AGG | + | chr2_1:50526305-50526324 | Msa0210410:intron | 40.0% | |
| TGCTGGAATGCATACTTATG+GGG | - | chr2_1:50526349-50526368 | None:intergenic | 40.0% | |
| ! | GGATGAGGTTTTCCTCTTAA+TGG | - | chr2_1:50526388-50526407 | None:intergenic | 40.0% |
| AGAAGAAAAAGGGTAGGATG+AGG | - | chr2_1:50526403-50526422 | None:intergenic | 40.0% | |
| ! | TCCAAGTACTTTTACCCCTT+GGG | + | chr2_1:50526428-50526447 | Msa0210410:intron | 40.0% |
| GACAATAGATACATCCCAAG+GGG | - | chr2_1:50526445-50526464 | None:intergenic | 40.0% | |
| CTTGAGTAGCATCAAGTCTT+GGG | - | chr2_1:50526509-50526528 | None:intergenic | 40.0% | |
| ACTTGAGTAGCATCAAGTCT+TGG | - | chr2_1:50526510-50526529 | None:intergenic | 40.0% | |
| ACTTGATGCTACTCAAGTGT+GGG | + | chr2_1:50526512-50526531 | Msa0210410:intron | 40.0% | |
| TCATTCATGACTACGGTGAA+CGG | - | chr2_1:50527792-50527811 | None:intergenic | 40.0% | |
| GATTGTTGGAACTTGTGTTG+GGG | + | chr2_1:50527881-50527900 | Msa0210410:intron | 40.0% | |
| ATTGTTGGAACTTGTGTTGG+GGG | + | chr2_1:50527882-50527901 | Msa0210410:intron | 40.0% | |
| GCATGTAAACTCAAAGCGTA+TGG | + | chr2_1:50525413-50525432 | Msa0210410:intron | 40.0% | |
| CCCCACCAATAACTGTATAT+TGG | + | chr2_1:50525468-50525487 | Msa0210410:intron | 40.0% | |
| TGGATGCAATAAGGAATGAC+CGG | + | chr2_1:50525488-50525507 | Msa0210410:intron | 40.0% | |
| GAACTCATAGTATCCTGAAG+GGG | - | chr2_1:50525519-50525538 | None:intergenic | 40.0% | |
| GGAACTCATAGTATCCTGAA+GGG | - | chr2_1:50525520-50525539 | None:intergenic | 40.0% | |
| AGGAACTCATAGTATCCTGA+AGG | - | chr2_1:50525521-50525540 | None:intergenic | 40.0% | |
| ATACTGTTAGGAGATACGCT+TGG | - | chr2_1:50525566-50525585 | None:intergenic | 40.0% | |
| CTAATGCATGAGTGAATTGC+TGG | - | chr2_1:50525606-50525625 | None:intergenic | 40.0% | |
| CTTGACATTTGGGCATTAGT+TGG | - | chr2_1:50525695-50525714 | None:intergenic | 40.0% | |
| ! | GGGTGTTTTCTCTCATATGA+AGG | - | chr2_1:50525740-50525759 | None:intergenic | 40.0% |
| ! | ATTAAGCACCCTTTTGCCAA+AGG | + | chr2_1:50525846-50525865 | Msa0210410:intron | 40.0% |
| GAAATCACCAACAGTTTCTC+TGG | + | chr2_1:50528626-50528645 | Msa0210410:intron | 40.0% | |
| GTGAAATCCAGAGAAACTGT+TGG | - | chr2_1:50528636-50528655 | None:intergenic | 40.0% | |
| ! | AGCTGTTTGGTTGACTTTGA+GGG | - | chr2_1:50528805-50528824 | None:intergenic | 40.0% |
| ! | AAGCTGTTTGGTTGACTTTG+AGG | - | chr2_1:50528806-50528825 | None:intergenic | 40.0% |
| GTTGGAAATAGCAAAGGAGT+TGG | + | chr2_1:50528952-50528971 | Msa0210410:intron | 40.0% | |
| TGAGATGATATCATCCACCA+TGG | + | chr2_1:50529006-50529025 | Msa0210410:CDS | 40.0% | |
| ATCAGCTGTACTACTCAAGA+GGG | - | chr2_1:50529053-50529072 | None:intergenic | 40.0% | |
| CGTAAATTTACAGCATCTCC+CGG | + | chr2_1:50529112-50529131 | Msa0210410:CDS | 40.0% | |
| AGCTTAGTGCATGTTTGGTT+TGG | + | chr2_1:50529331-50529350 | Msa0210410:three_prime_UTR | 40.0% | |
| CTCGCATCATCAACAAGTGA+AGG | + | chr2_1:50523748-50523767 | Msa0210410:five_prime_UTR | 45.0% | |
| TCTCTCCAATCTTCTCCTTC+AGG | + | chr2_1:50523841-50523860 | Msa0210410:CDS | 45.0% | |
| GCTCATAGTCTGCAGAATAG+TGG | + | chr2_1:50524950-50524969 | Msa0210410:intron | 45.0% | |
| AAGCCTAAAAGGCCTAAGAG+AGG | + | chr2_1:50524991-50525010 | Msa0210410:intron | 45.0% | |
| AGCCTAAAAGGCCTAAGAGA+GGG | + | chr2_1:50524992-50525011 | Msa0210410:intron | 45.0% | |
| CATTAATCCAGCCCTCTCTT+AGG | - | chr2_1:50525006-50525025 | None:intergenic | 45.0% | |
| CAGGATCAATGGAAACAGAG+TGG | - | chr2_1:50525160-50525179 | None:intergenic | 45.0% | |
| TCTGTTGGAACTTGTGTTGG+GGG | + | chr2_1:50525252-50525271 | Msa0210410:intron | 45.0% | |
| GGGTTGCCATACTAACCTTT+AGG | + | chr2_1:50525435-50525454 | Msa0210410:intron | 45.0% | |
| TGGTTGTGCAATACACGTCA+AGG | - | chr2_1:50525541-50525560 | None:intergenic | 45.0% | |
| ! | TGAAAATGGTGGGGGATTGT+TGG | - | chr2_1:50526006-50526025 | None:intergenic | 45.0% |
| CGCGAGATACCATTATCTGA+AGG | - | chr2_1:50526063-50526082 | None:intergenic | 45.0% | |
| AATGAAGTTTGGCCGCTTCA+CGG | - | chr2_1:50526298-50526317 | None:intergenic | 45.0% | |
| ! | GTCCAAGTACTTTTACCCCT+TGG | + | chr2_1:50526427-50526446 | Msa0210410:intron | 45.0% |
| !! | TCCCAAGGGGTAAAAGTACT+TGG | - | chr2_1:50526432-50526451 | None:intergenic | 45.0% |
| GCATCAAGTCTTGGGTTCAA+TGG | - | chr2_1:50526501-50526520 | None:intergenic | 45.0% | |
| GACTTGATGCTACTCAAGTG+TGG | + | chr2_1:50526511-50526530 | Msa0210410:intron | 45.0% | |
| GGGTTGCCATACTAACCTTT+AGG | + | chr2_1:50525435-50525454 | Msa0210410:intron | 45.0% | |
| TGGTTGTGCAATACACGTCA+AGG | - | chr2_1:50525541-50525560 | None:intergenic | 45.0% | |
| CATCAGCTGTACTACTCAAG+AGG | - | chr2_1:50529054-50529073 | None:intergenic | 45.0% | |
| TGAGTAGTACAGCTGATGTG+TGG | + | chr2_1:50529056-50529075 | Msa0210410:CDS | 45.0% | |
| !! | TGTTTGGGTGTTGATGTCTC+CGG | - | chr2_1:50529134-50529153 | None:intergenic | 45.0% |
| GTAGCAGCTTAGTGCATGTT+TGG | + | chr2_1:50529326-50529345 | Msa0210410:three_prime_UTR | 45.0% | |
| CTGGACAAAGCGAGTTAGTT+TGG | - | chr2_1:50529446-50529465 | None:intergenic | 45.0% | |
| ACAAAATGAACACGTGGTGC+TGG | - | chr2_1:50529465-50529484 | None:intergenic | 45.0% | |
| !! | ATAAATAAATAAATAAATGA+TGG | - | chr2_1:50523882-50523901 | None:intergenic | 5.0% |
| AGAAATCAATCGCATGGCCG+AGG | + | chr2_1:50523787-50523806 | Msa0210410:exon | 50.0% | |
| AAGCTGAAAGAGCTGGGCAT+CGG | - | chr2_1:50523822-50523841 | None:intergenic | 50.0% | |
| GGAGAGAAGCTGAAAGAGCT+GGG | - | chr2_1:50523828-50523847 | None:intergenic | 50.0% | |
| TGGAGAGAAGCTGAAAGAGC+TGG | - | chr2_1:50523829-50523848 | None:intergenic | 50.0% | |
| ! | AGCCCTCTCTTAGGCCTTTT+AGG | - | chr2_1:50524997-50525016 | None:intergenic | 50.0% |
| TAAAAGGCCTAAGAGAGGGC+TGG | + | chr2_1:50524996-50525015 | Msa0210410:intron | 50.0% | |
| ! | GTTAGGAGATACGCTTGGTG+TGG | - | chr2_1:50525561-50525580 | None:intergenic | 50.0% |
| AACCCTTGAACTCCGTGAAG+CGG | + | chr2_1:50526283-50526302 | Msa0210410:intron | 50.0% | |
| ! | GTTAGGAGATACGCTTGGTG+TGG | - | chr2_1:50525561-50525580 | None:intergenic | 50.0% |
| GTCAACCAAACAGCTTGACG+AGG | + | chr2_1:50528810-50528829 | Msa0210410:CDS | 50.0% | |
| AACCAAACAGCTTGACGAGG+TGG | + | chr2_1:50528813-50528832 | Msa0210410:intron | 50.0% | |
| AACCACCTCGTCAAGCTGTT+TGG | - | chr2_1:50528818-50528837 | None:intergenic | 50.0% | |
| TTGAGGATCAGTAGCCATGG+TGG | - | chr2_1:50529023-50529042 | None:intergenic | 50.0% | |
| CACTTGAGGATCAGTAGCCA+TGG | - | chr2_1:50529026-50529045 | None:intergenic | 50.0% | |
| TCGGAGTTAGCAGTGATGAC+TGG | - | chr2_1:50529085-50529104 | None:intergenic | 50.0% | |
| AGTCATCACTGCTAACTCCG+AGG | + | chr2_1:50529084-50529103 | Msa0210410:CDS | 50.0% | |
| !! | GTTTGGGTGTTGATGTCTCC+GGG | - | chr2_1:50529133-50529152 | None:intergenic | 50.0% |
| ATCAATCGCATGGCCGAGGA+AGG | + | chr2_1:50523791-50523810 | Msa0210410:exon | 55.0% | |
| TCAATCGCATGGCCGAGGAA+GGG | + | chr2_1:50523792-50523811 | Msa0210410:exon | 55.0% | |
| AGCTGAAAGAGCTGGGCATC+GGG | - | chr2_1:50523821-50523840 | None:intergenic | 55.0% | |
| GGGTCAAATTGGGACCGAAC+TGG | - | chr2_1:50524196-50524215 | None:intergenic | 55.0% | |
| TGCACAGGGATGAACTGCAG+TGG | - | chr2_1:50524479-50524498 | None:intergenic | 55.0% | |
| TGGGGGCGAATCGAACCTAA+AGG | - | chr2_1:50525453-50525472 | None:intergenic | 55.0% | |
| GTATCCTGAAGGGGATTCGC+CGG | - | chr2_1:50525510-50525529 | None:intergenic | 55.0% | |
| TGGGGGCGAATCGAACCTAA+AGG | - | chr2_1:50525453-50525472 | None:intergenic | 55.0% | |
| GTATCCTGAAGGGGATTCGC+CGG | - | chr2_1:50525510-50525529 | None:intergenic | 55.0% | |
| CTCAAGAGGGACTGCACTTG+AGG | - | chr2_1:50529040-50529059 | None:intergenic | 55.0% | |
| ! | GGCATCGGGTTTCCCTTCCT+CGG | - | chr2_1:50523807-50523826 | None:intergenic | 60.0% |
| ATGACCGGCGAATCCCCTTC+AGG | + | chr2_1:50525503-50525522 | Msa0210410:intron | 60.0% | |
| GGCCGCTTCACGGAGTTCAA+GGG | - | chr2_1:50526288-50526307 | None:intergenic | 60.0% | |
| TGGCCGCTTCACGGAGTTCA+AGG | - | chr2_1:50526289-50526308 | None:intergenic | 60.0% | |
| ATGACCGGCGAATCCCCTTC+AGG | + | chr2_1:50525503-50525522 | Msa0210410:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 50523695 | 50529557 | 50523695 | ID=Msa0210410;Name=Msa0210410 |
| chr2_1 | mRNA | 50523695 | 50529557 | 50523695 | ID=Msa0210410-mRNA-1;Parent=Msa0210410;Name=Msa0210410-mRNA-1;_AED=0.01;_eAED=0.01;_QI=105|1|1|1|1|1|3|383|130 |
| chr2_1 | exon | 50523695 | 50523862 | 50523695 | ID=Msa0210410-mRNA-1:exon:13942;Parent=Msa0210410-mRNA-1 |
| chr2_1 | exon | 50528724 | 50528831 | 50528724 | ID=Msa0210410-mRNA-1:exon:13943;Parent=Msa0210410-mRNA-1 |
| chr2_1 | exon | 50528953 | 50529557 | 50528953 | ID=Msa0210410-mRNA-1:exon:13944;Parent=Msa0210410-mRNA-1 |
| chr2_1 | five_prime_UTR | 50523695 | 50523799 | 50523695 | ID=Msa0210410-mRNA-1:five_prime_utr;Parent=Msa0210410-mRNA-1 |
| chr2_1 | CDS | 50523800 | 50523862 | 50523800 | ID=Msa0210410-mRNA-1:cds;Parent=Msa0210410-mRNA-1 |
| chr2_1 | CDS | 50528724 | 50528831 | 50528724 | ID=Msa0210410-mRNA-1:cds;Parent=Msa0210410-mRNA-1 |
| chr2_1 | CDS | 50528953 | 50529174 | 50528953 | ID=Msa0210410-mRNA-1:cds;Parent=Msa0210410-mRNA-1 |
| chr2_1 | three_prime_UTR | 50529175 | 50529557 | 50529175 | ID=Msa0210410-mRNA-1:three_prime_utr;Parent=Msa0210410-mRNA-1 |
| Gene Sequence |
| Protein sequence |
