Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0784410 | XP_003616636.1 | 99.660 | 589 | 2 | 0 | 1 | 589 | 1 | 589 | 0.0 | 1221 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0784410 | sp|Q39033|PLCD2_ARATH | 67.851 | 591 | 176 | 6 | 1 | 588 | 1 | 580 | 0.0 | 832 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0784410 | G7KH12 | 99.660 | 589 | 2 | 0 | 1 | 589 | 1 | 589 | 0.0 | 1221 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0032320 | Msa0784410 | 0.816229 | 6.158983e-52 | -8.615850e-47 |
| Msa0626280 | Msa0784410 | 0.831685 | 1.451097e-55 | -8.615850e-47 |
| Msa0751260 | Msa0784410 | 0.821186 | 4.616536e-53 | -8.615850e-47 |
| Msa0756530 | Msa0784410 | 0.822752 | 2.002690e-53 | -8.615850e-47 |
| Msa0784410 | Msa0818140 | 0.824621 | 7.308727e-54 | -8.615850e-47 |
| Msa0784410 | Msa0818160 | 0.925963 | 8.987594e-91 | -8.615850e-47 |
| Msa0784410 | Msa0826220 | 0.824784 | 6.689319e-54 | -8.615850e-47 |
| Msa0784410 | Msa0826760 | 0.802671 | 5.023056e-49 | -8.615850e-47 |
| Msa0784410 | Msa0865890 | 0.819003 | 1.458582e-52 | -8.615850e-47 |
| Msa0784410 | Msa1235380 | 0.822212 | 2.673634e-53 | -8.615850e-47 |
| Msa0784410 | Msa1396780 | 0.806450 | 8.176313e-50 | -8.615850e-47 |
| Msa0784410 | Msa1418280 | 0.810297 | 1.236423e-50 | -8.615850e-47 |
| Msa0784410 | Msa1435070 | 0.805900 | 1.067682e-49 | -8.615850e-47 |
| Msa0784410 | Msa1439700 | 0.804801 | 1.814839e-49 | -8.615850e-47 |
| Msa0784410 | Msa1439710 | 0.817509 | 3.178108e-52 | -8.615850e-47 |
| Msa0154440 | Msa0784410 | 0.803649 | 3.151282e-49 | -8.615850e-47 |
| Msa0187030 | Msa0784410 | 0.806070 | 9.832912e-50 | -8.615850e-47 |
| Msa0196340 | Msa0784410 | 0.801614 | 8.284593e-49 | -8.615850e-47 |
| Msa0210410 | Msa0784410 | -0.801321 | 9.516206e-49 | -8.615850e-47 |
| Msa0215590 | Msa0784410 | 0.816317 | 5.885651e-52 | -8.615850e-47 |
| Msa0230370 | Msa0784410 | 0.812327 | 4.483619e-51 | -8.615850e-47 |
| Msa0238230 | Msa0784410 | 0.820972 | 5.171222e-53 | -8.615850e-47 |
| Msa0382270 | Msa0784410 | 0.801311 | 9.561514e-49 | -8.615850e-47 |
| Msa0474590 | Msa0784410 | 0.803661 | 3.134244e-49 | -8.615850e-47 |
| Msa0255850 | Msa0784410 | 0.819813 | 9.534880e-53 | -8.615850e-47 |
| Msa0333650 | Msa0784410 | 0.814709 | 1.342102e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0784410 | MtrunA17_Chr5g0437081 | 99.660 | 589 | 2 | 0 | 1 | 589 | 1 | 589 | 0.0 | 1221 |
| Msa0784410 | MtrunA17_Chr3g0113531 | 76.102 | 590 | 133 | 5 | 3 | 588 | 7 | 592 | 0.0 | 879 |
| Msa0784410 | MtrunA17_Chr3g0112551 | 74.216 | 574 | 137 | 5 | 17 | 588 | 7 | 571 | 0.0 | 824 |
| Msa0784410 | MtrunA17_Chr5g0430181 | 61.889 | 593 | 215 | 6 | 5 | 588 | 3 | 593 | 0.0 | 753 |
| Msa0784410 | MtrunA17_Chr5g0437061 | 62.028 | 503 | 158 | 5 | 107 | 588 | 1 | 491 | 0.0 | 637 |
| Msa0784410 | MtrunA17_Chr3g0113521 | 52.797 | 572 | 249 | 9 | 26 | 588 | 27 | 586 | 0.0 | 592 |
| Msa0784410 | MtrunA17_Chr5g0437041 | 50.083 | 601 | 277 | 9 | 6 | 588 | 11 | 606 | 0.0 | 584 |
| Msa0784410 | MtrunA17_Chr5g0430191 | 51.182 | 592 | 247 | 11 | 3 | 588 | 17 | 572 | 0.0 | 580 |
| Msa0784410 | MtrunA17_Chr3g0113471 | 52.414 | 580 | 255 | 9 | 17 | 586 | 17 | 585 | 0.0 | 577 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0784410 | AT3G08510.2 | 67.851 | 591 | 176 | 6 | 1 | 588 | 1 | 580 | 0.0 | 832 |
| Msa0784410 | AT3G08510.1 | 67.851 | 591 | 176 | 6 | 1 | 588 | 1 | 580 | 0.0 | 832 |
| Msa0784410 | AT3G55940.1 | 66.330 | 594 | 183 | 7 | 1 | 588 | 1 | 583 | 0.0 | 796 |
| Msa0784410 | AT3G08510.4 | 63.621 | 591 | 172 | 7 | 1 | 588 | 1 | 551 | 0.0 | 756 |
| Msa0784410 | AT3G08510.3 | 63.621 | 591 | 172 | 7 | 1 | 588 | 1 | 551 | 0.0 | 756 |
| Msa0784410 | AT2G40116.1 | 61.667 | 540 | 189 | 7 | 56 | 588 | 84 | 612 | 0.0 | 678 |
| Msa0784410 | AT5G58700.3 | 57.621 | 597 | 231 | 12 | 5 | 588 | 9 | 596 | 0.0 | 674 |
| Msa0784410 | AT5G58700.1 | 57.621 | 597 | 231 | 12 | 5 | 588 | 9 | 596 | 0.0 | 674 |
| Msa0784410 | AT5G58700.2 | 63.190 | 489 | 173 | 6 | 103 | 588 | 4 | 488 | 0.0 | 630 |
| Msa0784410 | AT5G58690.3 | 53.041 | 592 | 249 | 9 | 5 | 588 | 7 | 577 | 0.0 | 623 |
| Msa0784410 | AT5G58690.1 | 53.041 | 592 | 249 | 9 | 5 | 588 | 7 | 577 | 0.0 | 623 |
| Msa0784410 | AT5G58690.2 | 54.276 | 573 | 233 | 9 | 24 | 588 | 7 | 558 | 0.0 | 615 |
| Msa0784410 | AT5G58670.1 | 52.801 | 589 | 239 | 5 | 3 | 586 | 2 | 556 | 0.0 | 612 |
| Msa0784410 | AT4G38530.1 | 50.767 | 587 | 251 | 7 | 4 | 586 | 3 | 555 | 0.0 | 585 |
| Msa0784410 | AT3G47290.1 | 38.879 | 589 | 283 | 15 | 14 | 588 | 5 | 530 | 8.73e-121 | 368 |
| Msa0784410 | AT3G47290.2 | 38.850 | 574 | 274 | 15 | 14 | 573 | 5 | 515 | 3.85e-116 | 357 |
| Msa0784410 | AT3G47220.1 | 36.993 | 592 | 291 | 15 | 13 | 588 | 5 | 530 | 1.39e-111 | 344 |
Find 148 sgRNAs with CRISPR-Local
Find 342 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAATTATAATCCCTTAAT+TGG | 0.063516 | 5_2:-68990723 | Msa0784410:CDS |
| CTTCGTCGCGTCAGAATTTC+CGG | 0.202300 | 5_2:-68992310 | Msa0784410:CDS |
| TTCTTAGGTGACTGTATATA+TGG | 0.217887 | 5_2:-68989864 | Msa0784410:intron |
| CTGGAGTAAGATGGTCTTCT+AGG | 0.232724 | 5_2:+68992277 | None:intergenic |
| GCAATTAAACCTTTATATTC+TGG | 0.248822 | 5_2:+68991476 | None:intergenic |
| TCCATGAATCCACCCAATTA+AGG | 0.262517 | 5_2:+68990710 | None:intergenic |
| CCCTTAATTGGGTGGATTCA+TGG | 0.271157 | 5_2:-68990711 | Msa0784410:CDS |
| ATTCATATACATGAAAGTTT+TGG | 0.277100 | 5_2:-68989152 | Msa0784410:three_prime_UTR |
| TAGATGCTTGAGGTCTATTA+AGG | 0.282266 | 5_2:-68992340 | Msa0784410:CDS |
| GACCAGTATATATGAAATAA+TGG | 0.291133 | 5_2:+68992863 | None:intergenic |
| TAAATACAGGTTGGGATTGC+TGG | 0.296624 | 5_2:-68989667 | Msa0784410:intron |
| CCAAACATGCTTACCTGTTT+CGG | 0.306660 | 5_2:-68989482 | Msa0784410:CDS |
| GCCACTTTGGCTTGAAGATC+TGG | 0.311937 | 5_2:+68992258 | None:intergenic |
| TCCCATTATTTCATATATAC+TGG | 0.316971 | 5_2:-68992865 | Msa0784410:CDS |
| CTTACTCTTGCATAGAAATC+TGG | 0.318132 | 5_2:+68989788 | None:intergenic |
| AGTTGTATTTATCTCCCTTC+TGG | 0.319388 | 5_2:+68989422 | None:intergenic |
| TGAGTTCCCGCTTACTGTTC+CGG | 0.319955 | 5_2:-68989569 | Msa0784410:CDS |
| TAAGTCCAGCACCCCTTCTA+TGG | 0.337792 | 5_2:+68994559 | None:intergenic |
| TTCACAGGTAACTTAGCTTT+AGG | 0.344189 | 5_2:+68989991 | None:intergenic |
| TTGGTTCCATTGTAGGGGTA+TGG | 0.346040 | 5_2:-68990123 | Msa0784410:intron |
| GTTTCAAGCATTTCCATAGA+AGG | 0.351861 | 5_2:-68994572 | Msa0784410:CDS |
| CCGAAACAGGTAAGCATGTT+TGG | 0.351920 | 5_2:+68989482 | None:intergenic |
| AAGGTACTCCTTAGGTGGTT+TGG | 0.352592 | 5_2:+68991781 | None:intergenic |
| GAGTCAATGCGAGTACCTTT+TGG | 0.358619 | 5_2:+68990747 | None:intergenic |
| GATAATGTTGATGTTCTTCA+TGG | 0.363896 | 5_2:-68992721 | Msa0784410:CDS |
| TAGATGGTTACTTCAACATT+TGG | 0.368286 | 5_2:-68991887 | Msa0784410:CDS |
| CAAGGGCAATAGAGGATAAC+TGG | 0.369854 | 5_2:-68989615 | Msa0784410:CDS |
| CCAGTCGTTAAGAGAAAATC+TGG | 0.371762 | 5_2:+68990036 | None:intergenic |
| TTTGGATTTGGTTATGTTTG+TGG | 0.373288 | 5_2:+68994822 | None:intergenic |
| TTAGTCTCGTACCTTGTAAT+CGG | 0.375379 | 5_2:+68991649 | None:intergenic |
| ATGTCCGAGAAAGATGATTT+TGG | 0.376271 | 5_2:-68989508 | Msa0784410:CDS |
| CCATCTTTAGGGAAACAGTT+TGG | 0.381531 | 5_2:-68991564 | Msa0784410:intron |
| TTATGTTCTCATAAATAATT+CGG | 0.383122 | 5_2:-68989364 | Msa0784410:three_prime_UTR |
| GTCGCTGCTCAGCTGATTCC+CGG | 0.383750 | 5_2:+68992825 | None:intergenic |
| TATCTCCCTTCTGGCTATGC+AGG | 0.385216 | 5_2:+68989431 | None:intergenic |
| GGTCACAATTCCTATCTAAC+CGG | 0.390542 | 5_2:-68992844 | Msa0784410:CDS |
| TTTGTCTCAAGGTACTCCTT+AGG | 0.390852 | 5_2:+68991773 | None:intergenic |
| CTCTGCAACGCTTTCACGAT+TGG | 0.394778 | 5_2:+68992790 | None:intergenic |
| TCCTTCAAGCTTTCTGAGCC+AGG | 0.395536 | 5_2:+68991848 | None:intergenic |
| GCCACCAAAATCATCTTTCT+CGG | 0.396908 | 5_2:+68989504 | None:intergenic |
| GTTGTTGTTGAGGTTGTTGC+TGG | 0.400164 | 5_2:+68994903 | None:intergenic |
| TCACTGCACGGAAAGGCTTC+AGG | 0.402037 | 5_2:-68991725 | Msa0784410:CDS |
| GAGATCCCGAGCTTCAAGTT+AGG | 0.417679 | 5_2:-68991680 | Msa0784410:CDS |
| CTATTGTTTGTGTGTTGTGT+TGG | 0.427368 | 5_2:+68994863 | None:intergenic |
| CCACTCCTTAGCTCCGAAAC+AGG | 0.428640 | 5_2:+68989469 | None:intergenic |
| CTTATACGCCTCGCTTTCTC+CGG | 0.429732 | 5_2:+68991401 | None:intergenic |
| CAGCTGATTCCCGGTTAGAT+AGG | 0.433100 | 5_2:+68992834 | None:intergenic |
| GGTTTAATTGCCATTCATGC+TGG | 0.438375 | 5_2:-68991464 | Msa0784410:CDS |
| CCATGAATCCACCCAATTAA+GGG | 0.444510 | 5_2:+68990711 | None:intergenic |
| TTTCGACTTCCCAGCATGAA+TGG | 0.445147 | 5_2:+68991454 | None:intergenic |
| ACCAGTATATATGAAATAAT+GGG | 0.446982 | 5_2:+68992864 | None:intergenic |
| CATACAGTGTTTGTTTATGC+TGG | 0.447970 | 5_2:-68994764 | Msa0784410:CDS |
| AAGTGAGCAACAACTTGAAA+AGG | 0.451992 | 5_2:-68991375 | Msa0784410:CDS |
| CAAATTATAATCCCTTAATT+GGG | 0.455647 | 5_2:-68990722 | Msa0784410:CDS |
| TGGTTCCATTGTAGGGGTAT+GGG | 0.456000 | 5_2:-68990122 | Msa0784410:intron |
| CTCATGGAAAAGAAATTGTC+AGG | 0.458333 | 5_2:-68991343 | Msa0784410:intron |
| AATAATGTGTTTGTGCTGTA+AGG | 0.459015 | 5_2:-68989237 | Msa0784410:three_prime_UTR |
| TCTTCTAGGGTTATTACAAC+CGG | 0.465124 | 5_2:+68992291 | None:intergenic |
| ACCTGTGAAGACTACTTTGA+AGG | 0.465356 | 5_2:-68989977 | Msa0784410:intron |
| AAGAACATCAACATTATCCT+TGG | 0.475267 | 5_2:+68992726 | None:intergenic |
| TTAACTAACCTCGGCCACTT+TGG | 0.490233 | 5_2:+68992245 | None:intergenic |
| TCTTAGGTGACTGTATATAT+GGG | 0.491202 | 5_2:-68989863 | Msa0784410:intron |
| GTTGTTGCTGGCAGTGATGA+TGG | 0.491383 | 5_2:+68994915 | None:intergenic |
| ACCTGGCTCAGAAAGCTTGA+AGG | 0.492584 | 5_2:-68991849 | Msa0784410:CDS |
| AAGAGGGTCTTGATCTCTTG+TGG | 0.493379 | 5_2:+68994708 | None:intergenic |
| AAGCGTTGCAGAGAGGTGTA+AGG | 0.494457 | 5_2:-68992780 | Msa0784410:CDS |
| CGCATGGCTCAAAATAGATC+CGG | 0.496028 | 5_2:-68991420 | Msa0784410:CDS |
| TTTCAAGCATTTCCATAGAA+GGG | 0.497387 | 5_2:-68994571 | Msa0784410:CDS |
| ACATTATCCTTGGATGCATT+AGG | 0.497632 | 5_2:+68992736 | None:intergenic |
| GGATCAAAGACCTCATTATC+CGG | 0.501977 | 5_2:+68990012 | None:intergenic |
| AGGATAACTGGCTGCCTACA+TGG | 0.502775 | 5_2:-68989603 | Msa0784410:CDS |
| CATTTCCATAGAAGGGGTGC+TGG | 0.503533 | 5_2:-68994564 | Msa0784410:CDS |
| GCTTACCTGTTTCGGAGCTA+AGG | 0.504467 | 5_2:-68989474 | Msa0784410:CDS |
| CGACGATGAAGCGTGGGGAA+CGG | 0.505474 | 5_2:-68991702 | Msa0784410:CDS |
| GTGGATTCATGGAGCTCAAA+TGG | 0.506219 | 5_2:-68990700 | Msa0784410:CDS |
| CGTGAACTTCTATACGAAGA+AGG | 0.506720 | 5_2:+68989539 | None:intergenic |
| AACATAACCACACCCTCCAT+TGG | 0.506899 | 5_2:+68990065 | None:intergenic |
| ATTATAATCCCTTAATTGGG+TGG | 0.507171 | 5_2:-68990719 | Msa0784410:CDS |
| CCTTGAGACAAAAGAAGTAA+AGG | 0.507809 | 5_2:-68991762 | Msa0784410:CDS |
| AGGTTTGTTATCCGATTACA+AGG | 0.508087 | 5_2:-68991660 | Msa0784410:intron |
| ACAAACCTAACTTGAAGCTC+GGG | 0.512099 | 5_2:+68991675 | None:intergenic |
| ACCTTCAAAGTAGTCTTCAC+AGG | 0.513097 | 5_2:+68989976 | None:intergenic |
| ATTCTGAGGGTGTTTCCAAA+AGG | 0.513881 | 5_2:-68990762 | Msa0784410:CDS |
| GTCTCAAGGTACTCCTTAGG+TGG | 0.517428 | 5_2:+68991776 | None:intergenic |
| AGGTGTAAGGGTAATTGAGT+TGG | 0.519469 | 5_2:-68992767 | Msa0784410:CDS |
| GAAAAGGCTGCTATAACTCA+TGG | 0.519626 | 5_2:-68991359 | Msa0784410:CDS |
| AATGGTTGCATTCAACATGC+AGG | 0.520279 | 5_2:-68990682 | Msa0784410:intron |
| ATACGAAGAAGGGCTAGTTC+CGG | 0.521787 | 5_2:+68989550 | None:intergenic |
| CACGTAGCTCCAGAATATAA+AGG | 0.523016 | 5_2:-68991485 | Msa0784410:CDS |
| TTCAGGCGACGATGAAGCGT+GGG | 0.524653 | 5_2:-68991708 | Msa0784410:CDS |
| AACAAACCTAACTTGAAGCT+CGG | 0.526863 | 5_2:+68991674 | None:intergenic |
| CATGGAATGTTTAGAGCCAA+TGG | 0.529913 | 5_2:-68990081 | Msa0784410:CDS |
| AGGGGTATGGGAGATCACTT+TGG | 0.529986 | 5_2:-68990110 | Msa0784410:CDS |
| TTCTGAGTATTGTTCAAAGA+GGG | 0.538272 | 5_2:+68994692 | None:intergenic |
| GTTTAATTGCCATTCATGCT+GGG | 0.544657 | 5_2:-68991463 | Msa0784410:CDS |
| TATATCAACCAAACCACCTA+AGG | 0.545265 | 5_2:-68991789 | Msa0784410:CDS |
| TTTAGAGCCAATGGAGGGTG+TGG | 0.547065 | 5_2:-68990072 | Msa0784410:CDS |
| AGTTTGTATGTTGTAGATGA+AGG | 0.547849 | 5_2:-68989286 | Msa0784410:three_prime_UTR |
| TCTTCAAGCCAAAGTGGCCG+AGG | 0.552882 | 5_2:-68992253 | Msa0784410:intron |
| TGAGTTTAATGTTGTTGTTG+AGG | 0.552985 | 5_2:+68994893 | None:intergenic |
| GTTTCCCTGCATAGCCAGAA+GGG | 0.556734 | 5_2:-68989436 | Msa0784410:CDS |
| ATCTCCCTTCTGGCTATGCA+GGG | 0.556839 | 5_2:+68989432 | None:intergenic |
| TGGAGCTCATTAGATGCTTG+AGG | 0.557147 | 5_2:-68992350 | Msa0784410:CDS |
| AAGCATCTAATGAGCTCCAC+AGG | 0.560130 | 5_2:+68992354 | None:intergenic |
| ACAAAGGTAATGTCATATCA+TGG | 0.560404 | 5_2:+68992887 | None:intergenic |
| AGTTTCCCTGCATAGCCAGA+AGG | 0.561034 | 5_2:-68989437 | Msa0784410:CDS |
| AACGACTGGTCCGGATAATG+AGG | 0.561220 | 5_2:-68990022 | Msa0784410:CDS |
| ATGTTGATGTTCTTCATGGA+AGG | 0.566931 | 5_2:-68992717 | Msa0784410:intron |
| CTTGTGGCCTAATGCATCCA+AGG | 0.569316 | 5_2:-68992743 | Msa0784410:CDS |
| TTCAAGCATTTCCATAGAAG+GGG | 0.569805 | 5_2:-68994570 | Msa0784410:CDS |
| TGGAGTAAGATGGTCTTCTA+GGG | 0.570432 | 5_2:+68992278 | None:intergenic |
| AAATAGATCCGGAGAAAGCG+AGG | 0.570607 | 5_2:-68991409 | Msa0784410:CDS |
| GGATGATTCACTGCACGGAA+AGG | 0.571504 | 5_2:-68991732 | Msa0784410:CDS |
| CTAGTTCCGGAACAGTAAGC+GGG | 0.572544 | 5_2:+68989563 | None:intergenic |
| TATATGAAATAATGGGACAA+AGG | 0.576354 | 5_2:+68992871 | None:intergenic |
| TTTCTGAGTATTGTTCAAAG+AGG | 0.578422 | 5_2:+68994691 | None:intergenic |
| CTTCAGGCGACGATGAAGCG+TGG | 0.578988 | 5_2:-68991709 | Msa0784410:CDS |
| CGGAAATTCTGACGCGACGA+AGG | 0.580991 | 5_2:+68992311 | None:intergenic |
| CTTGAAGATCTGGAGTAAGA+TGG | 0.581839 | 5_2:+68992268 | None:intergenic |
| GGAGACATACTATTTGTACC+TGG | 0.581909 | 5_2:-68991866 | Msa0784410:CDS |
| TCCAGATCTTCAAGCCAAAG+TGG | 0.589376 | 5_2:-68992259 | Msa0784410:CDS |
| AGATCACTTTGGCTGATGCA+TGG | 0.591647 | 5_2:-68990099 | Msa0784410:CDS |
| GTGACTGTATATATGGGAGA+AGG | 0.593969 | 5_2:-68989857 | Msa0784410:CDS |
| CTGTATATATGGGAGAAGGA+TGG | 0.596370 | 5_2:-68989853 | Msa0784410:CDS |
| TTACTCAGAAGAATATTCTG+AGG | 0.598350 | 5_2:-68990776 | Msa0784410:CDS |
| TGTATGTTGTAGATGAAGGA+TGG | 0.600989 | 5_2:-68989282 | Msa0784410:three_prime_UTR |
| TCAAATACCTCGTTCCATGT+AGG | 0.605540 | 5_2:+68989589 | None:intergenic |
| ATTCATGCTGGGAAGTCGAA+AGG | 0.606432 | 5_2:-68991452 | Msa0784410:CDS |
| TACTCAGAAGAATATTCTGA+GGG | 0.607678 | 5_2:-68990775 | Msa0784410:CDS |
| GTACAGTCATTAAGATGTGT+CGG | 0.610664 | 5_2:-68989319 | Msa0784410:three_prime_UTR |
| GCTAGTTCCGGAACAGTAAG+CGG | 0.611031 | 5_2:+68989562 | None:intergenic |
| AAAGAGGATGATTCACTGCA+CGG | 0.615717 | 5_2:-68991737 | Msa0784410:CDS |
| GGGTAATTGAGTTGGACTTG+TGG | 0.619450 | 5_2:-68992759 | Msa0784410:CDS |
| AGCGTTGCAGAGAGGTGTAA+GGG | 0.624722 | 5_2:-68992779 | Msa0784410:CDS |
| CCTGTTTCGGAGCTAAGGAG+TGG | 0.625863 | 5_2:-68989469 | Msa0784410:CDS |
| GTGAACTTCTATACGAAGAA+GGG | 0.630679 | 5_2:+68989540 | None:intergenic |
| CGAAAGGAGGAATAGACGCA+TGG | 0.636517 | 5_2:-68991436 | Msa0784410:CDS |
| TAGGACATTGACTACTCCTG+TGG | 0.639924 | 5_2:-68992370 | Msa0784410:CDS |
| GTCACAATTCCTATCTAACC+GGG | 0.642865 | 5_2:-68992843 | Msa0784410:CDS |
| CATGCTGGGAAGTCGAAAGG+AGG | 0.643715 | 5_2:-68991449 | Msa0784410:CDS |
| CAATTGAAGGTAAAAGAGCA+AGG | 0.649160 | 5_2:+68994496 | None:intergenic |
| GGAATGTTTAGAGCCAATGG+AGG | 0.657335 | 5_2:-68990078 | Msa0784410:CDS |
| GAATGTTTAGAGCCAATGGA+GGG | 0.667916 | 5_2:-68990077 | Msa0784410:CDS |
| CTTTATATTCTGGAGCTACG+TGG | 0.670500 | 5_2:+68991486 | None:intergenic |
| ACTCTTGCATAGAAATCTGG+AGG | 0.672637 | 5_2:+68989791 | None:intergenic |
| TCAGGCGACGATGAAGCGTG+GGG | 0.680759 | 5_2:-68991707 | Msa0784410:CDS |
| CTGGCTGCCTACATGGAACG+AGG | 0.693778 | 5_2:-68989596 | Msa0784410:CDS |
| ATCGTGAAAGCGTTGCAGAG+AGG | 0.719532 | 5_2:-68992787 | Msa0784410:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTTTTTTTA+TGG | - | chr5_2:68990567-68990586 | Msa0784410:intron | 0.0% |
| !! | CAAAAAAAAATTGATGTATT+TGG | - | chr5_2:68990166-68990185 | Msa0784410:intron | 15.0% |
| !!! | TTTTTTTATTATTAAATCGG+TGG | + | chr5_2:68990398-68990417 | None:intergenic | 15.0% |
| !!! | GCGTTTTTTTATTATTAAAT+CGG | + | chr5_2:68990401-68990420 | None:intergenic | 15.0% |
| !!! | ATTTTCAAGAAAATAATTTC+TGG | + | chr5_2:68991639-68991658 | None:intergenic | 15.0% |
| !!! | TTTACATTTTTTTAATCTCT+AGG | - | chr5_2:68991673-68991692 | Msa0784410:CDS | 15.0% |
| !!! | ATTATGTCTAAATTTTTAGA+TGG | - | chr5_2:68992159-68992178 | Msa0784410:intron | 15.0% |
| !!! | CACTTCAATTAATAATTTTA+GGG | - | chr5_2:68992450-68992469 | Msa0784410:intron | 15.0% |
| !!! | TAATTTTGACGAAATTTAAA+AGG | - | chr5_2:68992995-68993014 | Msa0784410:intron | 15.0% |
| !!! | GATAGTATTTTTCTAATATT+CGG | - | chr5_2:68993024-68993043 | Msa0784410:intron | 15.0% |
| !!! | CTATTTTCTTAAAATATTAC+AGG | + | chr5_2:68993598-68993617 | None:intergenic | 15.0% |
| !!! | TATATTATTGATTATGATGT+TGG | - | chr5_2:68993890-68993909 | Msa0784410:intron | 15.0% |
| !!! | TGATTTGATAATTTAAATAC+AGG | - | chr5_2:68994382-68994401 | Msa0784410:intron | 15.0% |
| !! | ATAGTATAATGAAAAAAACA+AGG | - | chr5_2:68994429-68994448 | Msa0784410:intron | 15.0% |
| !! | TAGTATAATGAAAAAAACAA+GGG | - | chr5_2:68994430-68994449 | Msa0784410:intron | 15.0% |
| !! | TTATGTTCTCATAAATAATT+CGG | - | chr5_2:68994698-68994717 | Msa0784410:CDS | 15.0% |
| !!! | TTTCAATTAAGAATCTTTTG+AGG | + | chr5_2:68989419-68989438 | None:intergenic | 20.0% |
| !!! | TTTTTACTTGTTTTAGTTTC+TGG | - | chr5_2:68989631-68989650 | Msa0784410:CDS | 20.0% |
| !!! | TTGTCTTTTATTGTCAATTT+AGG | - | chr5_2:68989795-68989814 | Msa0784410:CDS | 20.0% |
| !! | GATGTATTTAATGTAGAATT+CGG | + | chr5_2:68989938-68989957 | None:intergenic | 20.0% |
| !!! | GCTAATATTTTATTTTGCAA+CGG | - | chr5_2:68989979-68989998 | Msa0784410:CDS | 20.0% |
| !! | TCAAACAAAATTGATGTATT+TGG | + | chr5_2:68990205-68990224 | None:intergenic | 20.0% |
| !!! | TTTTTGCTTATATTTTGCAA+CGG | - | chr5_2:68990107-68990126 | Msa0784410:CDS | 20.0% |
| !! | TATATGCTAAGTATATACTT+TGG | - | chr5_2:68990254-68990273 | Msa0784410:intron | 20.0% |
| !! | ACATTGTGAACTATATTTAT+TGG | + | chr5_2:68990512-68990531 | None:intergenic | 20.0% |
| !!! | TTTTCTTCCTTTTTCATTAT+AGG | - | chr5_2:68990658-68990677 | Msa0784410:intron | 20.0% |
| !! | AGGTATATCCTATAATAAAA+GGG | + | chr5_2:68990690-68990709 | None:intergenic | 20.0% |
| !! | ACCAGTATATATGAAATAAT+GGG | + | chr5_2:68991201-68991220 | None:intergenic | 20.0% |
| !! | ATCATTATCAAGAAAATAGA+AGG | + | chr5_2:68991415-68991434 | None:intergenic | 20.0% |
| !!! | AAATAATTTCTGGATACAAT+TGG | + | chr5_2:68991629-68991648 | None:intergenic | 20.0% |
| !!! | ATTCAAAATATTTTTCTGTG+TGG | - | chr5_2:68991856-68991875 | Msa0784410:CDS | 20.0% |
| !! | AATTGAAGTGCAAATAAAAT+TGG | + | chr5_2:68992440-68992459 | None:intergenic | 20.0% |
| !!! | GCACTTCAATTAATAATTTT+AGG | - | chr5_2:68992449-68992468 | Msa0784410:intron | 20.0% |
| !! | CAAATAAATTTCCATCTTTA+GGG | - | chr5_2:68992487-68992506 | Msa0784410:intron | 20.0% |
| !! | CATTCATTTCAAACATAAAA+AGG | + | chr5_2:68992771-68992790 | None:intergenic | 20.0% |
| !!! | TATCTAATAGGAAAATGTTT+TGG | - | chr5_2:68993165-68993184 | Msa0784410:intron | 20.0% |
| !!! | ATTTTTATTTACCTGATTGT+TGG | - | chr5_2:68993251-68993270 | Msa0784410:intron | 20.0% |
| !! | TCAAATTATAATCCCTTAAT+TGG | - | chr5_2:68993339-68993358 | Msa0784410:intron | 20.0% |
| !! | CAAATTATAATCCCTTAATT+GGG | - | chr5_2:68993340-68993359 | Msa0784410:intron | 20.0% |
| !! | GAAGTATGATATTACTATAT+TGG | + | chr5_2:68994173-68994192 | None:intergenic | 20.0% |
| !! | AAATTGTTTATAAGCTATTC+TGG | + | chr5_2:68994347-68994366 | None:intergenic | 20.0% |
| !!! | TTGATAATTTAAATACAGGT+TGG | - | chr5_2:68994386-68994405 | Msa0784410:intron | 20.0% |
| !! | TGATAATTTAAATACAGGTT+GGG | - | chr5_2:68994387-68994406 | Msa0784410:intron | 20.0% |
| !!! | TTTTCATTATACTATCACTA+GGG | + | chr5_2:68994424-68994443 | None:intergenic | 20.0% |
| !!! | TTTTTCATTATACTATCACT+AGG | + | chr5_2:68994425-68994444 | None:intergenic | 20.0% |
| !!! | ATTCATATACATGAAAGTTT+TGG | - | chr5_2:68994910-68994929 | Msa0784410:five_prime_UTR | 20.0% |
| !!! | ATTGTGTTTTGTTTTGGATT+TGG | + | chr5_2:68989255-68989274 | None:intergenic | 25.0% |
| !!! | ATGATGATTGTGTTTTGTTT+TGG | + | chr5_2:68989261-68989280 | None:intergenic | 25.0% |
| ! | TTCAATTATGTTGTTCTTTG+TGG | - | chr5_2:68989699-68989718 | Msa0784410:intron | 25.0% |
| !!! | AAAATGAAAGGCATTAAACA+AGG | + | chr5_2:68989749-68989768 | None:intergenic | 25.0% |
| ! | ACAAAAACTGAGAAAATGAA+AGG | + | chr5_2:68989761-68989780 | None:intergenic | 25.0% |
| ! | ATATAATCAAAAGTGAGTCA+AGG | - | chr5_2:68990025-68990044 | Msa0784410:CDS | 25.0% |
| !! | GATGTATTTGGTTCAAAATT+TGG | + | chr5_2:68990193-68990212 | None:intergenic | 25.0% |
| !! | AAGTACATATTGTTTTCTAG+GGG | + | chr5_2:68990289-68990308 | None:intergenic | 25.0% |
| !! | CAAGTACATATTGTTTTCTA+GGG | + | chr5_2:68990290-68990309 | None:intergenic | 25.0% |
| !!! | TGTATTTTGTTTAAGTGTGA+AGG | - | chr5_2:68990321-68990340 | Msa0784410:intron | 25.0% |
| !!! | TTTTTTTTAGTTCACCATGA+TGG | - | chr5_2:68990485-68990504 | Msa0784410:intron | 25.0% |
| ! | CAGGTATATCCTATAATAAA+AGG | + | chr5_2:68990691-68990710 | None:intergenic | 25.0% |
| !! | CTTTTATTATAGGATATACC+TGG | - | chr5_2:68990689-68990708 | Msa0784410:CDS | 25.0% |
| ! | TATCTAAATGCTTCATATTG+TGG | + | chr5_2:68990747-68990766 | None:intergenic | 25.0% |
| !! | CAACCATAATTTAGAACTAT+GGG | - | chr5_2:68990860-68990879 | Msa0784410:intron | 25.0% |
| !!! | TATCCCATAGTTCTAAATTA+TGG | + | chr5_2:68990866-68990885 | None:intergenic | 25.0% |
| ! | GGTTGAATTGTACATAATTA+AGG | + | chr5_2:68990997-68991016 | None:intergenic | 25.0% |
| !!! | CGGTTTGTTAATTAAAGTTA+TGG | + | chr5_2:68991047-68991066 | None:intergenic | 25.0% |
| ! | AAGTAATGATGATTTATGAG+CGG | + | chr5_2:68991067-68991086 | None:intergenic | 25.0% |
| ! | CTCATAAATCATCATTACTT+AGG | - | chr5_2:68991067-68991086 | Msa0784410:intron | 25.0% |
| !! | TATATGAAATAATGGGACAA+AGG | + | chr5_2:68991194-68991213 | None:intergenic | 25.0% |
| ! | TCCCATTATTTCATATATAC+TGG | - | chr5_2:68991197-68991216 | Msa0784410:intron | 25.0% |
| ! | GACCAGTATATATGAAATAA+TGG | + | chr5_2:68991202-68991221 | None:intergenic | 25.0% |
| !! | GCTACAAATTCTAGTATTTT+CGG | - | chr5_2:68991462-68991481 | Msa0784410:CDS | 25.0% |
| ! | AATAGAAAATCATGATTGTC+AGG | - | chr5_2:68991555-68991574 | Msa0784410:CDS | 25.0% |
| ! | GTAAAAATGATATGCTGATA+TGG | + | chr5_2:68991602-68991621 | None:intergenic | 25.0% |
| ! | TTAGTTAACTGAAGTTGTAT+TGG | - | chr5_2:68991832-68991851 | Msa0784410:CDS | 25.0% |
| ! | TAGTTAACTGAAGTTGTATT+GGG | - | chr5_2:68991833-68991852 | Msa0784410:CDS | 25.0% |
| ! | GGAAATATCTTATGATATGT+CGG | + | chr5_2:68992046-68992065 | None:intergenic | 25.0% |
| ! | AAAAGAAGTAAAGGAAAAAG+AGG | - | chr5_2:68992309-68992328 | Msa0784410:CDS | 25.0% |
| ! | GCAAATAAATTTCCATCTTT+AGG | - | chr5_2:68992486-68992505 | Msa0784410:intron | 25.0% |
| !! | TAAAGAATATTTTCATGACG+AGG | - | chr5_2:68992522-68992541 | Msa0784410:intron | 25.0% |
| ! | GCAATTAAACCTTTATATTC+TGG | + | chr5_2:68992589-68992608 | None:intergenic | 25.0% |
| ! | GGATATCAAATAGGAATTAT+AGG | + | chr5_2:68992937-68992956 | None:intergenic | 25.0% |
| ! | TTGACGAAATTTAAAAGGAA+CGG | - | chr5_2:68993000-68993019 | Msa0784410:intron | 25.0% |
| ! | AAGTAGTAGAATTTCAATCA+GGG | + | chr5_2:68993068-68993087 | None:intergenic | 25.0% |
| ! | AAAGTAGTAGAATTTCAATC+AGG | + | chr5_2:68993069-68993088 | None:intergenic | 25.0% |
| !!! | TGAAATTCTACTACTTTTGT+TGG | - | chr5_2:68993072-68993091 | Msa0784410:intron | 25.0% |
| ! | TAAATGTGATACAATACAAC+AGG | + | chr5_2:68993105-68993124 | None:intergenic | 25.0% |
| ! | GTATTGTATCACATTTATTG+TGG | - | chr5_2:68993108-68993127 | Msa0784410:intron | 25.0% |
| ! | TATTAGATAGATCAAGTAGA+TGG | + | chr5_2:68993154-68993173 | None:intergenic | 25.0% |
| ! | ATCTACTTGATCTATCTAAT+AGG | - | chr5_2:68993153-68993172 | Msa0784410:intron | 25.0% |
| ! | AAAATGAAAAAACACTGAAG+AGG | + | chr5_2:68993418-68993437 | None:intergenic | 25.0% |
| !! | TAAAATATTTTGTCAGCACT+TGG | + | chr5_2:68993499-68993518 | None:intergenic | 25.0% |
| ! | ATTATAAATCCTGCTCAAAA+AGG | + | chr5_2:68993750-68993769 | None:intergenic | 25.0% |
| ! | TATGGAAATAAGCTGAAAAA+AGG | + | chr5_2:68994318-68994337 | None:intergenic | 25.0% |
| ! | TGAGTTTAATGTTGTTGTTG+AGG | + | chr5_2:68989172-68989191 | None:intergenic | 30.0% |
| ! | TTTGGATTTGGTTATGTTTG+TGG | + | chr5_2:68989243-68989262 | None:intergenic | 30.0% |
| ! | TTCTGAGTATTGTTCAAAGA+GGG | + | chr5_2:68989373-68989392 | None:intergenic | 30.0% |
| ! | TTTCTGAGTATTGTTCAAAG+AGG | + | chr5_2:68989374-68989393 | None:intergenic | 30.0% |
| !!! | AAGAATCTTTTGAGGTTTGA+AGG | + | chr5_2:68989411-68989430 | None:intergenic | 30.0% |
| TTTCAAGCATTTCCATAGAA+GGG | - | chr5_2:68989491-68989510 | Msa0784410:CDS | 30.0% | |
| ! | TTGCTCTTTTACCTTCAATT+GGG | - | chr5_2:68989568-68989587 | Msa0784410:CDS | 30.0% |
| ! | TTTTTACTTACCCCAATTGA+AGG | + | chr5_2:68989582-68989601 | None:intergenic | 30.0% |
| TTGACCAAAAAACATGACAA+GGG | + | chr5_2:68989657-68989676 | None:intergenic | 30.0% | |
| CTTGTACTACATAGTAATTC+AGG | - | chr5_2:68989847-68989866 | Msa0784410:CDS | 30.0% | |
| ! | GCAAGTACATATTGTTTTCT+AGG | + | chr5_2:68990291-68990310 | None:intergenic | 30.0% |
| TTTAAGTGTGAAGGTTAACA+TGG | - | chr5_2:68990330-68990349 | Msa0784410:intron | 30.0% | |
| ACATGGTGAACTATATGTAT+TGG | - | chr5_2:68990347-68990366 | Msa0784410:intron | 30.0% | |
| !!! | TATTTTTTATTTCACCGCGA+TGG | + | chr5_2:68990374-68990393 | None:intergenic | 30.0% |
| CTATATTTATTGGTCCATCA+TGG | + | chr5_2:68990502-68990521 | None:intergenic | 30.0% | |
| ! | TTCTTCTTTTGTGAAGTACA+CGG | - | chr5_2:68990613-68990632 | Msa0784410:intron | 30.0% |
| GTAGTGTCCTATAATGAAAA+AGG | + | chr5_2:68990668-68990687 | None:intergenic | 30.0% | |
| !! | ATATACCTGGTTCTAAATTG+TGG | - | chr5_2:68990702-68990721 | Msa0784410:CDS | 30.0% |
| ! | GCAACCATAATTTAGAACTA+TGG | - | chr5_2:68990859-68990878 | Msa0784410:intron | 30.0% |
| !!! | TGTGTTTTTTGTTGTATTCC+AGG | - | chr5_2:68991148-68991167 | Msa0784410:intron | 30.0% |
| ACAAAGGTAATGTCATATCA+TGG | + | chr5_2:68991178-68991197 | None:intergenic | 30.0% | |
| AAGAACATCAACATTATCCT+TGG | + | chr5_2:68991339-68991358 | None:intergenic | 30.0% | |
| GATAATGTTGATGTTCTTCA+TGG | - | chr5_2:68991341-68991360 | Msa0784410:intron | 30.0% | |
| AGGCGATTAAAGTATAAAAG+TGG | + | chr5_2:68991395-68991414 | None:intergenic | 30.0% | |
| CAATGGAGATAAGCTAAAAA+CGG | - | chr5_2:68992012-68992031 | Msa0784410:intron | 30.0% | |
| TCAAATAAGTCAATCTTGAC+AGG | - | chr5_2:68992113-68992132 | Msa0784410:intron | 30.0% | |
| TAGATGGTTACTTCAACATT+TGG | - | chr5_2:68992175-68992194 | Msa0784410:intron | 30.0% | |
| !!! | TTTTTAAGTGATTCAGGAGA+AGG | + | chr5_2:68992244-68992263 | None:intergenic | 30.0% |
| !!! | ATCCTCTTTTTAAGTGATTC+AGG | + | chr5_2:68992250-68992269 | None:intergenic | 30.0% |
| TATATGTTGAGCAACATCAT+GGG | + | chr5_2:68992818-68992837 | None:intergenic | 30.0% | |
| ATATATGTTGAGCAACATCA+TGG | + | chr5_2:68992819-68992838 | None:intergenic | 30.0% | |
| AACCTTAAAACGCCAATTAA+CGG | + | chr5_2:68992854-68992873 | None:intergenic | 30.0% | |
| TGTGAAATGGGATATCAAAT+AGG | + | chr5_2:68992946-68992965 | None:intergenic | 30.0% | |
| CAGAGTGAAATATGTGAAAT+GGG | + | chr5_2:68992958-68992977 | None:intergenic | 30.0% | |
| GATACAATACAACAGGAAAA+TGG | + | chr5_2:68993098-68993117 | None:intergenic | 30.0% | |
| TTACTCAGAAGAATATTCTG+AGG | - | chr5_2:68993286-68993305 | Msa0784410:intron | 30.0% | |
| TACTCAGAAGAATATTCTGA+GGG | - | chr5_2:68993287-68993306 | Msa0784410:intron | 30.0% | |
| ATTATAATCCCTTAATTGGG+TGG | - | chr5_2:68993343-68993362 | Msa0784410:intron | 30.0% | |
| AGTGTTAACTTAATCTCACA+TGG | + | chr5_2:68993827-68993846 | None:intergenic | 30.0% | |
| GATTAAGTTAACACTTGTAG+AGG | - | chr5_2:68993832-68993851 | Msa0784410:intron | 30.0% | |
| !!! | AAGTTAGTTTTCATTGTGCT+TGG | - | chr5_2:68993920-68993939 | Msa0784410:intron | 30.0% |
| ATCATACTTCACTTGTTCTT+AGG | - | chr5_2:68994183-68994202 | Msa0784410:intron | 30.0% | |
| TTCTTAGGTGACTGTATATA+TGG | - | chr5_2:68994198-68994217 | Msa0784410:intron | 30.0% | |
| TCTTAGGTGACTGTATATAT+GGG | - | chr5_2:68994199-68994218 | Msa0784410:intron | 30.0% | |
| AGTTTGTATGTTGTAGATGA+AGG | - | chr5_2:68994776-68994795 | Msa0784410:CDS | 30.0% | |
| AATAATGTGTTTGTGCTGTA+AGG | - | chr5_2:68994825-68994844 | Msa0784410:five_prime_UTR | 30.0% | |
| CTATTGTTTGTGTGTTGTGT+TGG | + | chr5_2:68989202-68989221 | None:intergenic | 35.0% | |
| CATACAGTGTTTGTTTATGC+TGG | - | chr5_2:68989298-68989317 | Msa0784410:three_prime_UTR | 35.0% | |
| GTTTCAAGCATTTCCATAGA+AGG | - | chr5_2:68989490-68989509 | Msa0784410:CDS | 35.0% | |
| TTCAAGCATTTCCATAGAAG+GGG | - | chr5_2:68989492-68989511 | Msa0784410:CDS | 35.0% | |
| CAATTGAAGGTAAAAGAGCA+AGG | + | chr5_2:68989569-68989588 | None:intergenic | 35.0% | |
| ! | CTTGCTCTTTTACCTTCAAT+TGG | - | chr5_2:68989567-68989586 | Msa0784410:CDS | 35.0% |
| ! | TGCTCTTTTACCTTCAATTG+GGG | - | chr5_2:68989569-68989588 | Msa0784410:CDS | 35.0% |
| GTTGACCAAAAAACATGACA+AGG | + | chr5_2:68989658-68989677 | None:intergenic | 35.0% | |
| TGGTCAACTGAATCTGTATT+TGG | - | chr5_2:68989670-68989689 | Msa0784410:intron | 35.0% | |
| ! | GGACACTACCCTTTTATTAT+AGG | - | chr5_2:68990679-68990698 | Msa0784410:intron | 35.0% |
| TCGCAACAAAATCACAATTG+CGG | - | chr5_2:68990779-68990798 | Msa0784410:CDS | 35.0% | |
| CACTGCGAACTTTGATATTA+TGG | + | chr5_2:68990834-68990853 | None:intergenic | 35.0% | |
| ! | GTTCACACTTTACACACTTT+TGG | - | chr5_2:68990941-68990960 | Msa0784410:intron | 35.0% |
| TATGTACAATTCAACCCTCA+AGG | - | chr5_2:68991001-68991020 | Msa0784410:intron | 35.0% | |
| ACATTATCCTTGGATGCATT+AGG | + | chr5_2:68991329-68991348 | None:intergenic | 35.0% | |
| ATGTTGATGTTCTTCATGGA+AGG | - | chr5_2:68991345-68991364 | Msa0784410:CDS | 35.0% | |
| !! | TTCTTGATAATGATGTCACC+TGG | - | chr5_2:68991421-68991440 | Msa0784410:CDS | 35.0% |
| ! | ATTTTTGCTGCAATTCAACC+AGG | + | chr5_2:68991442-68991461 | None:intergenic | 35.0% |
| TAGATGCTTGAGGTCTATTA+AGG | - | chr5_2:68991722-68991741 | Msa0784410:CDS | 35.0% | |
| !! | TCTTCTAGGGTTATTACAAC+CGG | + | chr5_2:68991774-68991793 | None:intergenic | 35.0% |
| CAACTTCAGTTAACTAACCT+CGG | + | chr5_2:68991829-68991848 | None:intergenic | 35.0% | |
| !!! | GCTGTTTTTATAACCTAACC+TGG | - | chr5_2:68991984-68992003 | Msa0784410:intron | 35.0% |
| !!! | CGTTTTTAGCTTATCTCCAT+TGG | + | chr5_2:68992014-68992033 | None:intergenic | 35.0% |
| GATAAGCTAAAAACGGCTTA+TGG | - | chr5_2:68992019-68992038 | Msa0784410:intron | 35.0% | |
| ATAAGCACTTAGACACTGTT+TGG | + | chr5_2:68992079-68992098 | None:intergenic | 35.0% | |
| CTCCTGAATCACTTAAAAAG+AGG | - | chr5_2:68992245-68992264 | Msa0784410:intron | 35.0% | |
| TATATCAACCAAACCACCTA+AGG | - | chr5_2:68992273-68992292 | Msa0784410:CDS | 35.0% | |
| ! | CCTTTACTTCTTTTGTCTCA+AGG | + | chr5_2:68992303-68992322 | None:intergenic | 35.0% |
| CCTTGAGACAAAAGAAGTAA+AGG | - | chr5_2:68992300-68992319 | Msa0784410:CDS | 35.0% | |
| AACAAACCTAACTTGAAGCT+CGG | + | chr5_2:68992391-68992410 | None:intergenic | 35.0% | |
| !! | AGGTTTGTTATCCGATTACA+AGG | - | chr5_2:68992402-68992421 | Msa0784410:intron | 35.0% |
| TTAGTCTCGTACCTTGTAAT+CGG | + | chr5_2:68992416-68992435 | None:intergenic | 35.0% | |
| GTTTAATTGCCATTCATGCT+GGG | - | chr5_2:68992599-68992618 | Msa0784410:intron | 35.0% | |
| AAGTGAGCAACAACTTGAAA+AGG | - | chr5_2:68992687-68992706 | Msa0784410:intron | 35.0% | |
| CTCATGGAAAAGAAATTGTC+AGG | - | chr5_2:68992719-68992738 | Msa0784410:CDS | 35.0% | |
| TTCTTACTACCTCCGTTAAT+TGG | - | chr5_2:68992839-68992858 | Msa0784410:CDS | 35.0% | |
| GCAGAGTGAAATATGTGAAA+TGG | + | chr5_2:68992959-68992978 | None:intergenic | 35.0% | |
| TCACTCTGCAATAAATAGTC+AGG | - | chr5_2:68992970-68992989 | Msa0784410:intron | 35.0% | |
| CACTCTGCAATAAATAGTCA+GGG | - | chr5_2:68992971-68992990 | Msa0784410:intron | 35.0% | |
| TCAGGGAAATAGAATACAGA+AGG | + | chr5_2:68993051-68993070 | None:intergenic | 35.0% | |
| !! | ATAGTAGTCTTATGAAGCAC+TGG | - | chr5_2:68993526-68993545 | Msa0784410:intron | 35.0% |
| ! | TAACTTTGATCTGAAGTGTC+AGG | - | chr5_2:68993663-68993682 | Msa0784410:intron | 35.0% |
| ! | AACTTTGATCTGAAGTGTCA+GGG | - | chr5_2:68993664-68993683 | Msa0784410:intron | 35.0% |
| ! | TTCACAGGTAACTTAGCTTT+AGG | + | chr5_2:68994074-68994093 | None:intergenic | 35.0% |
| ! | TGAAGACTACTTTGAAGGTA+AGG | - | chr5_2:68994090-68994109 | Msa0784410:intron | 35.0% |
| ! | GAAGACTACTTTGAAGGTAA+GGG | - | chr5_2:68994091-68994110 | Msa0784410:intron | 35.0% |
| CTTACTCTTGCATAGAAATC+TGG | + | chr5_2:68994277-68994296 | None:intergenic | 35.0% | |
| GAAAAAAACAAGGGCAATAG+AGG | - | chr5_2:68994439-68994458 | Msa0784410:intron | 35.0% | |
| GTGAACTTCTATACGAAGAA+GGG | + | chr5_2:68994525-68994544 | None:intergenic | 35.0% | |
| ! | ATGTCCGAGAAAGATGATTT+TGG | - | chr5_2:68994554-68994573 | Msa0784410:CDS | 35.0% |
| AGTTGTATTTATCTCCCTTC+TGG | + | chr5_2:68994643-68994662 | None:intergenic | 35.0% | |
| GTACAGTCATTAAGATGTGT+CGG | - | chr5_2:68994743-68994762 | Msa0784410:CDS | 35.0% | |
| TGTATGTTGTAGATGAAGGA+TGG | - | chr5_2:68994780-68994799 | Msa0784410:CDS | 35.0% | |
| ! | CTATATGTATTGGTCCATCG+CGG | - | chr5_2:68990357-68990376 | Msa0784410:intron | 40.0% |
| TCATATTGTGGCCACAATTG+TGG | + | chr5_2:68990735-68990754 | None:intergenic | 40.0% | |
| GAACTATGGGATACACCATA+TGG | - | chr5_2:68990873-68990892 | Msa0784410:intron | 40.0% | |
| GGTCACAATTCCTATCTAAC+CGG | - | chr5_2:68991218-68991237 | Msa0784410:intron | 40.0% | |
| GTCACAATTCCTATCTAACC+GGG | - | chr5_2:68991219-68991238 | Msa0784410:intron | 40.0% | |
| AGGTGTAAGGGTAATTGAGT+TGG | - | chr5_2:68991295-68991314 | Msa0784410:intron | 40.0% | |
| !! | CTAGTATTTTCGGTGCAATC+TGG | - | chr5_2:68991472-68991491 | Msa0784410:CDS | 40.0% |
| TGGAGTAAGATGGTCTTCTA+GGG | + | chr5_2:68991787-68991806 | None:intergenic | 40.0% | |
| ! | CTTGAAGATCTGGAGTAAGA+TGG | + | chr5_2:68991797-68991816 | None:intergenic | 40.0% |
| ACACTGTTTGGAAGAGCTTA+TGG | + | chr5_2:68992067-68992086 | None:intergenic | 40.0% | |
| GGAGACATACTATTTGTACC+TGG | - | chr5_2:68992196-68992215 | Msa0784410:intron | 40.0% | |
| ! | TTTGTCTCAAGGTACTCCTT+AGG | + | chr5_2:68992292-68992311 | None:intergenic | 40.0% |
| AAAGAGGATGATTCACTGCA+CGG | - | chr5_2:68992325-68992344 | Msa0784410:CDS | 40.0% | |
| ACAAACCTAACTTGAAGCTC+GGG | + | chr5_2:68992390-68992409 | None:intergenic | 40.0% | |
| CCAAACTGTTTCCCTAAAGA+TGG | + | chr5_2:68992501-68992520 | None:intergenic | 40.0% | |
| ! | CCATCTTTAGGGAAACAGTT+TGG | - | chr5_2:68992498-68992517 | Msa0784410:intron | 40.0% |
| !! | CTTTATATTCTGGAGCTACG+TGG | + | chr5_2:68992579-68992598 | None:intergenic | 40.0% |
| CACGTAGCTCCAGAATATAA+AGG | - | chr5_2:68992577-68992596 | Msa0784410:intron | 40.0% | |
| GGTTTAATTGCCATTCATGC+TGG | - | chr5_2:68992598-68992617 | Msa0784410:intron | 40.0% | |
| GAAAAGGCTGCTATAACTCA+TGG | - | chr5_2:68992703-68992722 | Msa0784410:intron | 40.0% | |
| CTTAAAACGCCAATTAACGG+AGG | + | chr5_2:68992851-68992870 | None:intergenic | 40.0% | |
| ! | CTCCGTTAATTGGCGTTTTA+AGG | - | chr5_2:68992849-68992868 | Msa0784410:CDS | 40.0% |
| CCTATAGCAAACCAACAATC+AGG | + | chr5_2:68993265-68993284 | None:intergenic | 40.0% | |
| !! | CCTGATTGTTGGTTTGCTAT+AGG | - | chr5_2:68993262-68993281 | Msa0784410:intron | 40.0% |
| !! | ATTCTGAGGGTGTTTCCAAA+AGG | - | chr5_2:68993300-68993319 | Msa0784410:intron | 40.0% |
| CCATGAATCCACCCAATTAA+GGG | + | chr5_2:68993354-68993373 | None:intergenic | 40.0% | |
| TCCATGAATCCACCCAATTA+AGG | + | chr5_2:68993355-68993374 | None:intergenic | 40.0% | |
| AATGGTTGCATTCAACATGC+AGG | - | chr5_2:68993380-68993399 | Msa0784410:intron | 40.0% | |
| !! | GTTTGTATTTGTGCCGTTTC+TGG | + | chr5_2:68993560-68993579 | None:intergenic | 40.0% |
| GCAGTCATATATGTCACTGT+TGG | - | chr5_2:68993630-68993649 | Msa0784410:intron | 40.0% | |
| TATATGTCACTGTTGGACAC+TGG | - | chr5_2:68993637-68993656 | Msa0784410:intron | 40.0% | |
| ! | ACTTTGATCTGAAGTGTCAG+GGG | - | chr5_2:68993665-68993684 | Msa0784410:intron | 40.0% |
| AAATCCTGCTCAAAAAGGAC+TGG | + | chr5_2:68993745-68993764 | None:intergenic | 40.0% | |
| ! | CATGGTAACTTGTGCGAAAA+GGG | + | chr5_2:68993809-68993828 | None:intergenic | 40.0% |
| ! | ACATGGTAACTTGTGCGAAA+AGG | + | chr5_2:68993810-68993829 | None:intergenic | 40.0% |
| ATTGTGCTTGGTTCCATTGT+AGG | - | chr5_2:68993932-68993951 | Msa0784410:intron | 40.0% | |
| TTGTGCTTGGTTCCATTGTA+GGG | - | chr5_2:68993933-68993952 | Msa0784410:intron | 40.0% | |
| ! | CATGGAATGTTTAGAGCCAA+TGG | - | chr5_2:68993981-68994000 | Msa0784410:intron | 40.0% |
| ! | GAATGTTTAGAGCCAATGGA+GGG | - | chr5_2:68993985-68994004 | Msa0784410:intron | 40.0% |
| CCAGTCGTTAAGAGAAAATC+TGG | + | chr5_2:68994029-68994048 | None:intergenic | 40.0% | |
| ! | CCAGATTTTCTCTTAACGAC+TGG | - | chr5_2:68994026-68994045 | Msa0784410:intron | 40.0% |
| !! | TTTTCTCTTAACGACTGGTC+CGG | - | chr5_2:68994031-68994050 | Msa0784410:intron | 40.0% |
| GGATCAAAGACCTCATTATC+CGG | + | chr5_2:68994053-68994072 | None:intergenic | 40.0% | |
| ACCTGTGAAGACTACTTTGA+AGG | - | chr5_2:68994085-68994104 | Msa0784410:intron | 40.0% | |
| ACCTTCAAAGTAGTCTTCAC+AGG | + | chr5_2:68994089-68994108 | None:intergenic | 40.0% | |
| GTGACTGTATATATGGGAGA+AGG | - | chr5_2:68994205-68994224 | Msa0784410:intron | 40.0% | |
| CTGTATATATGGGAGAAGGA+TGG | - | chr5_2:68994209-68994228 | Msa0784410:intron | 40.0% | |
| ACTCTTGCATAGAAATCTGG+AGG | + | chr5_2:68994274-68994293 | None:intergenic | 40.0% | |
| ! | AAGCTATTCTGGAGAGCTTA+TGG | + | chr5_2:68994336-68994355 | None:intergenic | 40.0% |
| ! | TAAATACAGGTTGGGATTGC+TGG | - | chr5_2:68994395-68994414 | Msa0784410:intron | 40.0% |
| TCAAATACCTCGTTCCATGT+AGG | + | chr5_2:68994476-68994495 | None:intergenic | 40.0% | |
| CGTGAACTTCTATACGAAGA+AGG | + | chr5_2:68994526-68994545 | None:intergenic | 40.0% | |
| ! | TCCGAGAAAGATGATTTTGG+TGG | - | chr5_2:68994557-68994576 | Msa0784410:CDS | 40.0% |
| GCCACCAAAATCATCTTTCT+CGG | + | chr5_2:68994561-68994580 | None:intergenic | 40.0% | |
| CCAAACATGCTTACCTGTTT+CGG | - | chr5_2:68994580-68994599 | Msa0784410:CDS | 40.0% | |
| ! | GTTGTTGTTGAGGTTGTTGC+TGG | + | chr5_2:68989162-68989181 | None:intergenic | 45.0% |
| AAGAGGGTCTTGATCTCTTG+TGG | + | chr5_2:68989357-68989376 | None:intergenic | 45.0% | |
| !!! | CTGGCCCTTGTCATGTTTTT+TGG | - | chr5_2:68989650-68989669 | Msa0784410:CDS | 45.0% |
| ! | GTGGACCACAATTTAGAACC+AGG | + | chr5_2:68990710-68990729 | None:intergenic | 45.0% |
| TACACCATATGGCATCGCAT+TGG | - | chr5_2:68990884-68990903 | Msa0784410:intron | 45.0% | |
| AAAGCCAATGCGATGCCATA+TGG | + | chr5_2:68990891-68990910 | None:intergenic | 45.0% | |
| AGGTCTTCAACGAGGGTTTA+AGG | - | chr5_2:68991021-68991040 | Msa0784410:intron | 45.0% | |
| ATGTCATATCATGGTGCACC+TGG | + | chr5_2:68991169-68991188 | None:intergenic | 45.0% | |
| !! | GGGTAATTGAGTTGGACTTG+TGG | - | chr5_2:68991303-68991322 | Msa0784410:intron | 45.0% |
| ! | TAGGACATTGACTACTCCTG+TGG | - | chr5_2:68991692-68991711 | Msa0784410:CDS | 45.0% |
| AAGCATCTAATGAGCTCCAC+AGG | + | chr5_2:68991711-68991730 | None:intergenic | 45.0% | |
| TGGAGCTCATTAGATGCTTG+AGG | - | chr5_2:68991712-68991731 | Msa0784410:CDS | 45.0% | |
| CTGGAGTAAGATGGTCTTCT+AGG | + | chr5_2:68991788-68991807 | None:intergenic | 45.0% | |
| TCCAGATCTTCAAGCCAAAG+TGG | - | chr5_2:68991803-68991822 | Msa0784410:CDS | 45.0% | |
| TTAACTAACCTCGGCCACTT+TGG | + | chr5_2:68991820-68991839 | None:intergenic | 45.0% | |
| AACCTAACCTGGAGAACCAA+TGG | - | chr5_2:68991995-68992014 | Msa0784410:intron | 45.0% | |
| !! | CTTATCTCCATTGGTTCTCC+AGG | + | chr5_2:68992005-68992024 | None:intergenic | 45.0% |
| ! | AAGGTACTCCTTAGGTGGTT+TGG | + | chr5_2:68992284-68992303 | None:intergenic | 45.0% |
| TTTCGACTTCCCAGCATGAA+TGG | + | chr5_2:68992611-68992630 | None:intergenic | 45.0% | |
| ATTCATGCTGGGAAGTCGAA+AGG | - | chr5_2:68992610-68992629 | Msa0784410:intron | 45.0% | |
| CGCATGGCTCAAAATAGATC+CGG | - | chr5_2:68992642-68992661 | Msa0784410:intron | 45.0% | |
| AAATAGATCCGGAGAAAGCG+AGG | - | chr5_2:68992653-68992672 | Msa0784410:intron | 45.0% | |
| ! | GAGTCAATGCGAGTACCTTT+TGG | + | chr5_2:68993318-68993337 | None:intergenic | 45.0% |
| ! | CCCTTAATTGGGTGGATTCA+TGG | - | chr5_2:68993351-68993370 | Msa0784410:intron | 45.0% |
| GTGGATTCATGGAGCTCAAA+TGG | - | chr5_2:68993362-68993381 | Msa0784410:intron | 45.0% | |
| ! | ACTGGCTTAGACACCAGAAA+CGG | - | chr5_2:68993544-68993563 | Msa0784410:intron | 45.0% |
| TGTGCTTGGTTCCATTGTAG+GGG | - | chr5_2:68993934-68993953 | Msa0784410:intron | 45.0% | |
| TTGGTTCCATTGTAGGGGTA+TGG | - | chr5_2:68993939-68993958 | Msa0784410:intron | 45.0% | |
| ! | TGGTTCCATTGTAGGGGTAT+GGG | - | chr5_2:68993940-68993959 | Msa0784410:intron | 45.0% |
| AGATCACTTTGGCTGATGCA+TGG | - | chr5_2:68993963-68993982 | Msa0784410:intron | 45.0% | |
| ! | GGAATGTTTAGAGCCAATGG+AGG | - | chr5_2:68993984-68994003 | Msa0784410:intron | 45.0% |
| AACATAACCACACCCTCCAT+TGG | + | chr5_2:68994000-68994019 | None:intergenic | 45.0% | |
| CAAGGGCAATAGAGGATAAC+TGG | - | chr5_2:68994447-68994466 | Msa0784410:intron | 45.0% | |
| !! | ATACGAAGAAGGGCTAGTTC+CGG | + | chr5_2:68994515-68994534 | None:intergenic | 45.0% |
| CCGAAACAGGTAAGCATGTT+TGG | + | chr5_2:68994583-68994602 | None:intergenic | 45.0% | |
| GTTGTTGCTGGCAGTGATGA+TGG | + | chr5_2:68989150-68989169 | None:intergenic | 50.0% | |
| ! | CATTTCCATAGAAGGGGTGC+TGG | - | chr5_2:68989498-68989517 | Msa0784410:CDS | 50.0% |
| TAAGTCCAGCACCCCTTCTA+TGG | + | chr5_2:68989506-68989525 | None:intergenic | 50.0% | |
| TGTGAAGTACACGGCATTGC+AGG | - | chr5_2:68990622-68990641 | Msa0784410:intron | 50.0% | |
| GTGAAGTACACGGCATTGCA+GGG | - | chr5_2:68990623-68990642 | Msa0784410:intron | 50.0% | |
| GCTGTATCAGCTGCATTTGC+TGG | - | chr5_2:68990801-68990820 | Msa0784410:intron | 50.0% | |
| AACCCTCAAGGTCTTCAACG+AGG | - | chr5_2:68991013-68991032 | Msa0784410:intron | 50.0% | |
| ACCCTCAAGGTCTTCAACGA+GGG | - | chr5_2:68991014-68991033 | Msa0784410:intron | 50.0% | |
| ACCCTCGTTGAAGACCTTGA+GGG | + | chr5_2:68991018-68991037 | None:intergenic | 50.0% | |
| AACCCTCGTTGAAGACCTTG+AGG | + | chr5_2:68991019-68991038 | None:intergenic | 50.0% | |
| ! | CAGCTGATTCCCGGTTAGAT+AGG | + | chr5_2:68991231-68991250 | None:intergenic | 50.0% |
| CTCTGCAACGCTTTCACGAT+TGG | + | chr5_2:68991275-68991294 | None:intergenic | 50.0% | |
| !! | ATCGTGAAAGCGTTGCAGAG+AGG | - | chr5_2:68991275-68991294 | Msa0784410:intron | 50.0% |
| ! | AAGCGTTGCAGAGAGGTGTA+AGG | - | chr5_2:68991282-68991301 | Msa0784410:intron | 50.0% |
| ! | AGCGTTGCAGAGAGGTGTAA+GGG | - | chr5_2:68991283-68991302 | Msa0784410:intron | 50.0% |
| CTTGTGGCCTAATGCATCCA+AGG | - | chr5_2:68991319-68991338 | Msa0784410:intron | 50.0% | |
| CTTCGTCGCGTCAGAATTTC+CGG | - | chr5_2:68991752-68991771 | Msa0784410:CDS | 50.0% | |
| !! | GCCACTTTGGCTTGAAGATC+TGG | + | chr5_2:68991807-68991826 | None:intergenic | 50.0% |
| !! | CTCCATTGGTTCTCCAGGTT+AGG | + | chr5_2:68992000-68992019 | None:intergenic | 50.0% |
| ACCTGGCTCAGAAAGCTTGA+AGG | - | chr5_2:68992213-68992232 | Msa0784410:intron | 50.0% | |
| TCCTTCAAGCTTTCTGAGCC+AGG | + | chr5_2:68992217-68992236 | None:intergenic | 50.0% | |
| ! | GTCTCAAGGTACTCCTTAGG+TGG | + | chr5_2:68992289-68992308 | None:intergenic | 50.0% |
| GGATGATTCACTGCACGGAA+AGG | - | chr5_2:68992330-68992349 | Msa0784410:CDS | 50.0% | |
| ! | GAGATCCCGAGCTTCAAGTT+AGG | - | chr5_2:68992382-68992401 | Msa0784410:intron | 50.0% |
| CGAAAGGAGGAATAGACGCA+TGG | - | chr5_2:68992626-68992645 | Msa0784410:intron | 50.0% | |
| CTTATACGCCTCGCTTTCTC+CGG | + | chr5_2:68992664-68992683 | None:intergenic | 50.0% | |
| CCTGCTCTCGTAGAGAAGAA+GGG | + | chr5_2:68993446-68993465 | None:intergenic | 50.0% | |
| TCCTGCTCTCGTAGAGAAGA+AGG | + | chr5_2:68993447-68993466 | None:intergenic | 50.0% | |
| TTCTTCTCTACGAGAGCAGG+AGG | - | chr5_2:68993446-68993465 | Msa0784410:intron | 50.0% | |
| ! | GTCAGCACTTGGTAGCTTGA+AGG | + | chr5_2:68993488-68993507 | None:intergenic | 50.0% |
| ! | TCTGAAGTGTCAGGGGTACA+TGG | - | chr5_2:68993672-68993691 | Msa0784410:intron | 50.0% |
| ! | CTGAAGTGTCAGGGGTACAT+GGG | - | chr5_2:68993673-68993692 | Msa0784410:intron | 50.0% |
| !! | TGAGCCAGTCCTTTTTGAGC+AGG | - | chr5_2:68993738-68993757 | Msa0784410:intron | 50.0% |
| GATCTCCCATACCCCTACAA+TGG | + | chr5_2:68993948-68993967 | None:intergenic | 50.0% | |
| ! | AGGGGTATGGGAGATCACTT+TGG | - | chr5_2:68993952-68993971 | Msa0784410:intron | 50.0% |
| ! | TTTAGAGCCAATGGAGGGTG+TGG | - | chr5_2:68993990-68994009 | Msa0784410:intron | 50.0% |
| ! | AACGACTGGTCCGGATAATG+AGG | - | chr5_2:68994040-68994059 | Msa0784410:intron | 50.0% |
| AGGATAACTGGCTGCCTACA+TGG | - | chr5_2:68994459-68994478 | Msa0784410:intron | 50.0% | |
| TGAGTTCCCGCTTACTGTTC+CGG | - | chr5_2:68994493-68994512 | Msa0784410:intron | 50.0% | |
| CTAGTTCCGGAACAGTAAGC+GGG | + | chr5_2:68994502-68994521 | None:intergenic | 50.0% | |
| GCTAGTTCCGGAACAGTAAG+CGG | + | chr5_2:68994503-68994522 | None:intergenic | 50.0% | |
| GCTTACCTGTTTCGGAGCTA+AGG | - | chr5_2:68994588-68994607 | Msa0784410:CDS | 50.0% | |
| AGTTTCCCTGCATAGCCAGA+AGG | - | chr5_2:68994625-68994644 | Msa0784410:CDS | 50.0% | |
| GTTTCCCTGCATAGCCAGAA+GGG | - | chr5_2:68994626-68994645 | Msa0784410:CDS | 50.0% | |
| ! | ATCTCCCTTCTGGCTATGCA+GGG | + | chr5_2:68994633-68994652 | None:intergenic | 50.0% |
| ! | TATCTCCCTTCTGGCTATGC+AGG | + | chr5_2:68994634-68994653 | None:intergenic | 50.0% |
| GTGGTCCACAGCCACAATTG+TGG | - | chr5_2:68990721-68990740 | Msa0784410:CDS | 55.0% | |
| TGTGGCCACAATTGTGGCTG+TGG | + | chr5_2:68990729-68990748 | None:intergenic | 55.0% | |
| CGGAAATTCTGACGCGACGA+AGG | + | chr5_2:68991754-68991773 | None:intergenic | 55.0% | |
| TCTTCAAGCCAAAGTGGCCG+AGG | - | chr5_2:68991809-68991828 | Msa0784410:CDS | 55.0% | |
| TCACTGCACGGAAAGGCTTC+AGG | - | chr5_2:68992337-68992356 | Msa0784410:CDS | 55.0% | |
| TTCAGGCGACGATGAAGCGT+GGG | - | chr5_2:68992354-68992373 | Msa0784410:CDS | 55.0% | |
| CATGCTGGGAAGTCGAAAGG+AGG | - | chr5_2:68992613-68992632 | Msa0784410:intron | 55.0% | |
| CCCTTCTTCTCTACGAGAGC+AGG | - | chr5_2:68993443-68993462 | Msa0784410:intron | 55.0% | |
| CCACTCCTTAGCTCCGAAAC+AGG | + | chr5_2:68994596-68994615 | None:intergenic | 55.0% | |
| CCTGTTTCGGAGCTAAGGAG+TGG | - | chr5_2:68994593-68994612 | Msa0784410:CDS | 55.0% | |
| ! | GTCGCTGCTCAGCTGATTCC+CGG | + | chr5_2:68991240-68991259 | None:intergenic | 60.0% |
| CTTCAGGCGACGATGAAGCG+TGG | - | chr5_2:68992353-68992372 | Msa0784410:CDS | 60.0% | |
| TCAGGCGACGATGAAGCGTG+GGG | - | chr5_2:68992355-68992374 | Msa0784410:CDS | 60.0% | |
| CGACGATGAAGCGTGGGGAA+CGG | - | chr5_2:68992360-68992379 | Msa0784410:CDS | 60.0% | |
| CTGGCTGCCTACATGGAACG+AGG | - | chr5_2:68994466-68994485 | Msa0784410:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 68989145 | 68994939 | 68989145 | ID=Msa0784410;Name=Msa0784410 |
| chr5_2 | mRNA | 68989145 | 68994939 | 68989145 | ID=Msa0784410-mRNA-1;Parent=Msa0784410;Name=Msa0784410-mRNA-1;_AED=0.07;_eAED=0.07;_QI=140|1|1|1|1|1|9|242|589 |
| chr5_2 | exon | 68989145 | 68989680 | 68989145 | ID=Msa0784410-mRNA-1:exon:20735;Parent=Msa0784410-mRNA-1 |
| chr5_2 | exon | 68989793 | 68989879 | 68989793 | ID=Msa0784410-mRNA-1:exon:20734;Parent=Msa0784410-mRNA-1 |
| chr5_2 | exon | 68989978 | 68990130 | 68989978 | ID=Msa0784410-mRNA-1:exon:20733;Parent=Msa0784410-mRNA-1 |
| chr5_2 | exon | 68990683 | 68990800 | 68990683 | ID=Msa0784410-mRNA-1:exon:20732;Parent=Msa0784410-mRNA-1 |
| chr5_2 | exon | 68991344 | 68991576 | 68991344 | ID=Msa0784410-mRNA-1:exon:20731;Parent=Msa0784410-mRNA-1 |
| chr5_2 | exon | 68991661 | 68991906 | 68991661 | ID=Msa0784410-mRNA-1:exon:20730;Parent=Msa0784410-mRNA-1 |
| chr5_2 | exon | 68992254 | 68992389 | 68992254 | ID=Msa0784410-mRNA-1:exon:20729;Parent=Msa0784410-mRNA-1 |
| chr5_2 | exon | 68992718 | 68992914 | 68992718 | ID=Msa0784410-mRNA-1:exon:20728;Parent=Msa0784410-mRNA-1 |
| chr5_2 | exon | 68994494 | 68994939 | 68994494 | ID=Msa0784410-mRNA-1:exon:20727;Parent=Msa0784410-mRNA-1 |
| chr5_2 | five_prime_UTR | 68994800 | 68994939 | 68994800 | ID=Msa0784410-mRNA-1:five_prime_utr;Parent=Msa0784410-mRNA-1 |
| chr5_2 | CDS | 68994494 | 68994799 | 68994494 | ID=Msa0784410-mRNA-1:cds;Parent=Msa0784410-mRNA-1 |
| chr5_2 | CDS | 68992718 | 68992914 | 68992718 | ID=Msa0784410-mRNA-1:cds;Parent=Msa0784410-mRNA-1 |
| chr5_2 | CDS | 68992254 | 68992389 | 68992254 | ID=Msa0784410-mRNA-1:cds;Parent=Msa0784410-mRNA-1 |
| chr5_2 | CDS | 68991661 | 68991906 | 68991661 | ID=Msa0784410-mRNA-1:cds;Parent=Msa0784410-mRNA-1 |
| chr5_2 | CDS | 68991344 | 68991576 | 68991344 | ID=Msa0784410-mRNA-1:cds;Parent=Msa0784410-mRNA-1 |
| chr5_2 | CDS | 68990683 | 68990800 | 68990683 | ID=Msa0784410-mRNA-1:cds;Parent=Msa0784410-mRNA-1 |
| chr5_2 | CDS | 68989978 | 68990130 | 68989978 | ID=Msa0784410-mRNA-1:cds;Parent=Msa0784410-mRNA-1 |
| chr5_2 | CDS | 68989793 | 68989879 | 68989793 | ID=Msa0784410-mRNA-1:cds;Parent=Msa0784410-mRNA-1 |
| chr5_2 | CDS | 68989387 | 68989680 | 68989387 | ID=Msa0784410-mRNA-1:cds;Parent=Msa0784410-mRNA-1 |
| chr5_2 | three_prime_UTR | 68989145 | 68989386 | 68989145 | ID=Msa0784410-mRNA-1:three_prime_utr;Parent=Msa0784410-mRNA-1 |
| Gene Sequence |
| Protein sequence |
