AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0818160

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0818160 MtrunA17_Chr5g0437081 98.973 584 6 0 1 584 1 584 0.0 1202
Msa0818160 MtrunA17_Chr5g0437081 89.461 427 31 1 547 959 163 589 0.0 781
Msa0818160 MtrunA17_Chr3g0113531 75.597 586 135 5 3 584 7 588 0.0 865
Msa0818160 MtrunA17_Chr3g0113531 76.533 375 86 2 584 958 220 592 0.0 570
Msa0818160 MtrunA17_Chr3g0112551 73.684 570 139 5 17 584 7 567 0.0 811
Msa0818160 MtrunA17_Chr3g0112551 75.532 376 90 2 584 958 197 571 0.0 564
Msa0818160 MtrunA17_Chr5g0430181 62.139 589 212 6 5 584 3 589 0.0 748
Msa0818160 MtrunA17_Chr5g0430181 57.143 441 170 4 536 958 154 593 1.56e-168 504
Msa0818160 MtrunA17_Chr5g0437061 62.800 500 151 6 107 584 1 487 0.0 631
Msa0818160 MtrunA17_Chr5g0437061 57.179 397 135 6 584 958 108 491 4.46e-147 446
Msa0818160 MtrunA17_Chr3g0113521 53.169 568 245 9 26 584 27 582 0.0 590
Msa0818160 MtrunA17_Chr3g0113521 54.948 384 159 6 576 958 216 586 1.10e-133 414
Msa0818160 MtrunA17_Chr3g0113471 52.595 578 253 9 17 584 17 583 0.0 578
Msa0818160 MtrunA17_Chr3g0113471 54.667 375 158 5 584 956 221 585 8.39e-130 404
Msa0818160 MtrunA17_Chr5g0437041 49.916 597 276 9 6 584 11 602 0.0 577
Msa0818160 MtrunA17_Chr5g0437041 51.969 381 173 6 584 958 230 606 2.53e-124 390
Msa0818160 MtrunA17_Chr5g0430191 51.190 588 245 11 3 584 17 568 0.0 577
Msa0818160 MtrunA17_Chr5g0430191 50.798 376 152 7 584 958 229 572 1.04e-112 358
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0818160 AT3G08510.2 68.143 587 173 6 1 584 1 576 0.0 827
Msa0818160 AT3G08510.2 59.829 468 153 8 501 958 138 580 0.0 538
Msa0818160 AT3G08510.1 68.143 587 173 6 1 584 1 576 0.0 827
Msa0818160 AT3G08510.1 59.829 468 153 8 501 958 138 580 0.0 538
Msa0818160 AT3G55940.1 66.441 590 181 7 1 584 1 579 0.0 790
Msa0818160 AT3G55940.1 61.806 432 136 6 547 958 161 583 5.25e-170 508
Msa0818160 AT3G08510.4 63.884 587 169 7 1 584 1 547 0.0 751
Msa0818160 AT3G08510.4 54.487 468 149 9 501 958 138 551 3.00e-152 461
Msa0818160 AT3G08510.3 63.884 587 169 7 1 584 1 547 0.0 751
Msa0818160 AT3G08510.3 54.487 468 149 9 501 958 138 551 3.00e-152 461
Msa0818160 AT2G40116.1 61.754 536 187 7 56 584 84 608 0.0 672
Msa0818160 AT2G40116.1 60.638 376 138 3 584 958 246 612 1.64e-154 469
Msa0818160 AT5G58700.3 57.673 593 229 12 5 584 9 592 0.0 668
Msa0818160 AT5G58700.3 61.640 378 139 5 584 958 222 596 1.31e-156 474
Msa0818160 AT5G58700.1 57.673 593 229 12 5 584 9 592 0.0 668
Msa0818160 AT5G58700.1 61.640 378 139 5 584 958 222 596 1.31e-156 474
Msa0818160 AT5G58700.2 63.093 485 172 6 103 584 4 484 0.0 624
Msa0818160 AT5G58700.2 61.640 378 139 5 584 958 114 488 8.42e-158 473
Msa0818160 AT5G58690.3 53.061 588 247 9 5 584 7 573 0.0 617
Msa0818160 AT5G58690.3 47.629 464 203 8 517 958 132 577 3.35e-130 405
Msa0818160 AT5G58690.1 53.061 588 247 9 5 584 7 573 0.0 617
Msa0818160 AT5G58690.1 47.629 464 203 8 517 958 132 577 3.35e-130 405
Msa0818160 AT5G58670.1 52.811 587 238 5 3 584 2 554 0.0 609
Msa0818160 AT5G58670.1 53.333 375 141 3 584 956 214 556 6.85e-129 401
Msa0818160 AT5G58690.2 54.306 569 231 9 24 584 7 554 0.0 609
Msa0818160 AT5G58690.2 47.629 464 203 8 517 958 113 558 3.14e-130 404
Msa0818160 AT4G38530.1 50.769 585 250 7 4 584 3 553 0.0 582
Msa0818160 AT4G38530.1 50.000 374 153 5 584 956 215 555 2.04e-117 371
Msa0818160 AT3G47290.1 38.870 584 280 15 14 583 5 525 5.53e-115 363
Msa0818160 AT3G47290.1 33.671 493 240 12 476 958 115 530 9.09e-74 253
Msa0818160 AT3G47290.2 38.850 574 274 15 14 573 5 515 2.92e-112 358
Msa0818160 AT3G47290.2 33.473 478 231 12 476 943 115 515 2.09e-69 242
Msa0818160 AT3G47220.1 37.308 587 286 16 13 583 5 525 3.31e-105 338
Msa0818160 AT3G47220.1 38.196 377 168 9 584 958 217 530 2.11e-68 238

Find 233 sgRNAs with CRISPR-Local

Find 548 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAATTATAATCCCTTAAT+TGG 0.063516 5_3:+53710722 Msa0818160:CDS
TCAAATTATAATCCCTTAAT+TGG 0.063516 5_3:+53714103 Msa0818160:CDS
CTTTGTCGCATCAGAATTTC+CGG 0.215738 5_3:+53709129 Msa0818160:CDS
TTCTTAGGTGACTGTATATA+TGG 0.217887 5_3:+53711578 Msa0818160:intron
TTCTTAGGTGACTGTATATA+TGG 0.217887 5_3:+53714950 Msa0818160:intron
CTGGAGTAAGATGGTCTTCT+AGG 0.232724 5_3:-53709162 None:intergenic
GCAATTAAACCTTTATATTC+TGG 0.248822 5_3:-53709968 None:intergenic
GCAATTAAACCTTTATATTC+TGG 0.248822 5_3:-53713348 None:intergenic
TCCATGAATCCACCCAATTA+AGG 0.262517 5_3:-53710735 None:intergenic
TCCATGAATCCACCCAATTA+AGG 0.262517 5_3:-53714116 None:intergenic
CCCTTAATTGGGTGGATTCA+TGG 0.271157 5_3:+53710734 Msa0818160:CDS
CCCTTAATTGGGTGGATTCA+TGG 0.271157 5_3:+53714115 Msa0818160:CDS
ATTCATATACATGAAAGTTT+TGG 0.277100 5_3:+53715662 Msa0818160:three_prime_UTR
TAGATGCTTGAGGTCTATTA+AGG 0.282266 5_3:+53709099 Msa0818160:CDS
GCCACTTTGGCTTGAAGATC+TGG 0.289061 5_3:-53709181 None:intergenic
TAAATACAGGTTGGGATTGC+TGG 0.296624 5_3:+53711775 Msa0818160:intron
TAAATACAGGTTGGGATTGC+TGG 0.296624 5_3:+53715147 Msa0818160:intron
CCAAACATGCTTACCTGTTT+CGG 0.306660 5_3:+53711960 Msa0818160:CDS
CCAAACATGCTTACCTGTTT+CGG 0.306660 5_3:+53715332 Msa0818160:CDS
CTTACTCTTGCATAGAAATC+TGG 0.318132 5_3:-53711654 None:intergenic
CTTACTCTTGCATAGAAATC+TGG 0.318132 5_3:-53715026 None:intergenic
AGTTGTATTTATCTCCCTTC+TGG 0.319388 5_3:-53712020 None:intergenic
AGTTGTATTTATCTCCCTTC+TGG 0.319388 5_3:-53715392 None:intergenic
TGAGTTCCCGCTTACTGTTC+CGG 0.319955 5_3:+53711873 Msa0818160:CDS
TGAGTTCCCGCTTACTGTTC+CGG 0.319955 5_3:+53715245 Msa0818160:CDS
TCTCATTATTTCATATATAC+TGG 0.332144 5_3:+53708574 Msa0818160:CDS
TTCACAGGTAACTTAGCTTT+AGG 0.344189 5_3:-53711451 None:intergenic
TTCACAGGTAACTTAGCTTT+AGG 0.344189 5_3:-53714823 None:intergenic
TTGGTTCCATTGTAGGGGTA+TGG 0.346040 5_3:+53711319 Msa0818160:intron
TTGGTTCCATTGTAGGGGTA+TGG 0.346040 5_3:+53714691 Msa0818160:intron
CCGAAACAGGTAAGCATGTT+TGG 0.351920 5_3:-53711960 None:intergenic
CCGAAACAGGTAAGCATGTT+TGG 0.351920 5_3:-53715332 None:intergenic
AAGGTACTCCTTAGGTGGTT+TGG 0.352592 5_3:-53709663 None:intergenic
AAGGTACTCCTTAGGTGGTT+TGG 0.352592 5_3:-53713043 None:intergenic
GAGTCAATGCGAGTACCTTT+TGG 0.358619 5_3:-53710698 None:intergenic
GAGTCAATGCGAGTACCTTT+TGG 0.358619 5_3:-53714079 None:intergenic
GATAATGTTGATGTTCTTCA+TGG 0.363896 5_3:+53708718 Msa0818160:CDS
TAGATGGTTACTTCAACATT+TGG 0.368286 5_3:+53709557 Msa0818160:intron
TAGATGGTTACTTCAACATT+TGG 0.368286 5_3:+53712937 Msa0818160:intron
GGGTAATTGAGTTGGACTTA+TGG 0.369086 5_3:+53708680 Msa0818160:CDS
CAAGGGCAATAGAGGATAAC+TGG 0.369854 5_3:+53711827 Msa0818160:CDS
CAAGGGCAATAGAGGATAAC+TGG 0.369854 5_3:+53715199 Msa0818160:CDS
CCAGTCGTTAAGAGAAAATC+TGG 0.371762 5_3:-53711406 None:intergenic
CCAGTCGTTAAGAGAAAATC+TGG 0.371762 5_3:-53714778 None:intergenic
TTTGGATTTGGTTATGTTTG+TGG 0.373288 5_3:-53706628 None:intergenic
TTAGTCTCGTACCTTGTAAT+CGG 0.375379 5_3:-53709795 None:intergenic
TTAGTCTCGTACCTTGTAAT+CGG 0.375379 5_3:-53713175 None:intergenic
ATGTCCGAGAAAGATGATTT+TGG 0.376271 5_3:+53711934 Msa0818160:CDS
ATGTCCGAGAAAGATGATTT+TGG 0.376271 5_3:+53715306 Msa0818160:CDS
CCATCTTTAGGGAAACAGTT+TGG 0.381531 5_3:+53709880 Msa0818160:intron
CCATCTTTAGGGAAACAGTT+TGG 0.381531 5_3:+53713260 Msa0818160:intron
TTATGTTCTCATAAATAATT+CGG 0.383122 5_3:+53715450 Msa0818160:three_prime_UTR
TATCTCCCTTCTGGCTATGC+AGG 0.385216 5_3:-53712011 None:intergenic
GGTCACAATTCCTATCTAAC+CGG 0.390542 5_3:+53708595 Msa0818160:CDS
TTTGTCTCAAGGTACTCCTT+AGG 0.390852 5_3:-53709671 None:intergenic
TTTGTCTCAAGGTACTCCTT+AGG 0.390852 5_3:-53713051 None:intergenic
CTCTGCAACGCTTTCACGAT+TGG 0.394778 5_3:-53708649 None:intergenic
TCCTTCAAGCTTTCTGAGCC+AGG 0.395536 5_3:-53709596 None:intergenic
TCCTTCAAGCTTTCTGAGCC+AGG 0.395536 5_3:-53712976 None:intergenic
GTCACTGCTCAGCTGATTCC+CGG 0.395646 5_3:-53708614 None:intergenic
GCCACCAAAATCATCTTTCT+CGG 0.396908 5_3:-53711938 None:intergenic
GCCACCAAAATCATCTTTCT+CGG 0.396908 5_3:-53715310 None:intergenic
TCACTGCACGGAAAGGCTTC+AGG 0.402037 5_3:+53709719 Msa0818160:CDS
TCACTGCACGGAAAGGCTTC+AGG 0.402037 5_3:+53713099 Msa0818160:CDS
GAGATCCCGAGCTTCAAGTT+AGG 0.417679 5_3:+53709764 Msa0818160:CDS
GAGATCCCGAGCTTCAAGTT+AGG 0.417679 5_3:+53713144 Msa0818160:CDS
GTTATTGTTGAGGTTGTTGC+TGG 0.425236 5_3:-53706547 None:intergenic
CTATTGTTTGTGTGTTGTGT+TGG 0.427368 5_3:-53706587 None:intergenic
CCACTCCTTAGCTCCGAAAC+AGG 0.428640 5_3:-53711973 None:intergenic
CCACTCCTTAGCTCCGAAAC+AGG 0.428640 5_3:-53715345 None:intergenic
CAGCTGATTCCCGGTTAGAT+AGG 0.433100 5_3:-53708605 None:intergenic
GGTTTAATTGCCATTCATGC+TGG 0.438375 5_3:+53709980 Msa0818160:CDS
GGTTTAATTGCCATTCATGC+TGG 0.438375 5_3:+53713360 Msa0818160:CDS
CTTATACGCCTCACTTTCTC+CGG 0.442156 5_3:-53710043 None:intergenic
CTTATACGCCTCACTTTCTC+CGG 0.442156 5_3:-53713423 None:intergenic
CCATGAATCCACCCAATTAA+GGG 0.444510 5_3:-53710734 None:intergenic
CCATGAATCCACCCAATTAA+GGG 0.444510 5_3:-53714115 None:intergenic
TTTCGACTTCCCAGCATGAA+TGG 0.445147 5_3:-53709990 None:intergenic
TTTCGACTTCCCAGCATGAA+TGG 0.445147 5_3:-53713370 None:intergenic
CATACAGTGTTTGTTTATGC+TGG 0.447970 5_3:+53706686 Msa0818160:CDS
AAGTGAGCAACAACTTGAAA+AGG 0.451992 5_3:+53710069 Msa0818160:CDS
AAGTGAGCAACAACTTGAAA+AGG 0.451992 5_3:+53713449 Msa0818160:CDS
CAAATTATAATCCCTTAATT+GGG 0.455647 5_3:+53710723 Msa0818160:CDS
CAAATTATAATCCCTTAATT+GGG 0.455647 5_3:+53714104 Msa0818160:CDS
TGGTTCCATTGTAGGGGTAT+GGG 0.456000 5_3:+53711320 Msa0818160:intron
TGGTTCCATTGTAGGGGTAT+GGG 0.456000 5_3:+53714692 Msa0818160:intron
CTCATGGAAAAGAAATTGTC+AGG 0.458333 5_3:+53710101 Msa0818160:CDS
CTCATGGAAAAGAAATTGTC+AGG 0.458333 5_3:+53713481 Msa0818160:CDS
AATAATGTGTTTGTGCTGTA+AGG 0.459015 5_3:+53715577 Msa0818160:three_prime_UTR
TCTTCTAGGGTTATTACAAC+CGG 0.465124 5_3:-53709148 None:intergenic
ACCTGTGAAGACTACTTTGA+AGG 0.465356 5_3:+53711465 Msa0818160:CDS
ACCTGTGAAGACTACTTTGA+AGG 0.465356 5_3:+53714837 Msa0818160:CDS
AAGAACATCAACATTATCCT+TGG 0.475267 5_3:-53708713 None:intergenic
TCTTAGGTGACTGTATATAT+GGG 0.491202 5_3:+53711579 Msa0818160:intron
TCTTAGGTGACTGTATATAT+GGG 0.491202 5_3:+53714951 Msa0818160:intron
ACCTGGCTCAGAAAGCTTGA+AGG 0.492584 5_3:+53709595 Msa0818160:CDS
ACCTGGCTCAGAAAGCTTGA+AGG 0.492584 5_3:+53712975 Msa0818160:CDS
CGGAAATTCTGATGCGACAA+AGG 0.493340 5_3:-53709128 None:intergenic
AAGAGGGTCTTGATCTCTTG+TGG 0.493379 5_3:-53706742 None:intergenic
AAGCGTTGCAGAGAGGTGTA+AGG 0.494457 5_3:+53708659 Msa0818160:CDS
CGCATGGCTCAAAATAGATC+CGG 0.496028 5_3:+53710024 Msa0818160:CDS
CGCATGGCTCAAAATAGATC+CGG 0.496028 5_3:+53713404 Msa0818160:CDS
ACATTATCCTTGGATGCATT+AGG 0.497632 5_3:-53708703 None:intergenic
GTTGTTGCTGGCAGTGATGA+TGG 0.499210 5_3:-53706535 None:intergenic
TTAACTAACCTCAGCCACTT+TGG 0.500319 5_3:-53709194 None:intergenic
GGATCAAAGACCTCATTATC+CGG 0.501977 5_3:-53711430 None:intergenic
GGATCAAAGACCTCATTATC+CGG 0.501977 5_3:-53714802 None:intergenic
AGGATAACTGGCTGCCTACA+TGG 0.502775 5_3:+53711839 Msa0818160:CDS
AGGATAACTGGCTGCCTACA+TGG 0.502775 5_3:+53715211 Msa0818160:CDS
GCTTACCTGTTTCGGAGCTA+AGG 0.504467 5_3:+53711968 Msa0818160:CDS
GCTTACCTGTTTCGGAGCTA+AGG 0.504467 5_3:+53715340 Msa0818160:CDS
GTGGATTCATGGAGCTCAAA+TGG 0.506219 5_3:+53710745 Msa0818160:CDS
GTGGATTCATGGAGCTCAAA+TGG 0.506219 5_3:+53714126 Msa0818160:CDS
CGTGAACTTCTATACGAAGA+AGG 0.506720 5_3:-53711903 None:intergenic
CGTGAACTTCTATACGAAGA+AGG 0.506720 5_3:-53715275 None:intergenic
AACATAACCACACCCTCCAT+TGG 0.506899 5_3:-53711377 None:intergenic
AACATAACCACACCCTCCAT+TGG 0.506899 5_3:-53714749 None:intergenic
ATTATAATCCCTTAATTGGG+TGG 0.507171 5_3:+53710726 Msa0818160:CDS
ATTATAATCCCTTAATTGGG+TGG 0.507171 5_3:+53714107 Msa0818160:CDS
CCTTGAGACAAAAGAAGTAA+AGG 0.507809 5_3:+53709682 Msa0818160:CDS
CCTTGAGACAAAAGAAGTAA+AGG 0.507809 5_3:+53713062 Msa0818160:CDS
AGGTTTGTTATCCGATTACA+AGG 0.508087 5_3:+53709784 Msa0818160:CDS
AGGTTTGTTATCCGATTACA+AGG 0.508087 5_3:+53713164 Msa0818160:CDS
ACAAACCTAACTTGAAGCTC+GGG 0.512099 5_3:-53709769 None:intergenic
ACAAACCTAACTTGAAGCTC+GGG 0.512099 5_3:-53713149 None:intergenic
ACCTTCAAAGTAGTCTTCAC+AGG 0.513097 5_3:-53711466 None:intergenic
ACCTTCAAAGTAGTCTTCAC+AGG 0.513097 5_3:-53714838 None:intergenic
ATTCTGAGGGTGTTTCCAAA+AGG 0.513881 5_3:+53710683 Msa0818160:CDS
ATTCTGAGGGTGTTTCCAAA+AGG 0.513881 5_3:+53714064 Msa0818160:CDS
GTCTCAAGGTACTCCTTAGG+TGG 0.517428 5_3:-53709668 None:intergenic
GTCTCAAGGTACTCCTTAGG+TGG 0.517428 5_3:-53713048 None:intergenic
AGGTGTAAGGGTAATTGAGT+TGG 0.519469 5_3:+53708672 Msa0818160:CDS
GAAAAGGCTGCTATAACTCA+TGG 0.519626 5_3:+53710085 Msa0818160:CDS
GAAAAGGCTGCTATAACTCA+TGG 0.519626 5_3:+53713465 Msa0818160:CDS
AATGGTTGCATTCAACATGC+AGG 0.520279 5_3:+53710763 Msa0818160:CDS
AATGGTTGCATTCAACATGC+AGG 0.520279 5_3:+53714144 Msa0818160:CDS
ATACGAAGAAGGGCTAGTTC+CGG 0.521787 5_3:-53711892 None:intergenic
ATACGAAGAAGGGCTAGTTC+CGG 0.521787 5_3:-53715264 None:intergenic
CACGTAGCTCCAGAATATAA+AGG 0.523016 5_3:+53709959 Msa0818160:CDS
CACGTAGCTCCAGAATATAA+AGG 0.523016 5_3:+53713339 Msa0818160:CDS
TTCAGGCGACGATGAAGCGT+GGG 0.524653 5_3:+53709736 Msa0818160:CDS
TTCAGGCGACGATGAAGCGT+GGG 0.524653 5_3:+53713116 Msa0818160:CDS
AACAAACCTAACTTGAAGCT+CGG 0.526863 5_3:-53709770 None:intergenic
AACAAACCTAACTTGAAGCT+CGG 0.526863 5_3:-53713150 None:intergenic
CATGGAATGTTTAGAGCCAA+TGG 0.529913 5_3:+53711361 Msa0818160:CDS
CATGGAATGTTTAGAGCCAA+TGG 0.529913 5_3:+53714733 Msa0818160:CDS
AGGGGTATGGGAGATCACTT+TGG 0.529986 5_3:+53711332 Msa0818160:intron
AGGGGTATGGGAGATCACTT+TGG 0.529986 5_3:+53714704 Msa0818160:intron
TTCTGAGTATTGTTCAAAGA+GGG 0.538272 5_3:-53706758 None:intergenic
GTTTAATTGCCATTCATGCT+GGG 0.544657 5_3:+53709981 Msa0818160:CDS
GTTTAATTGCCATTCATGCT+GGG 0.544657 5_3:+53713361 Msa0818160:CDS
TATATCAACCAAACCACCTA+AGG 0.545265 5_3:+53709655 Msa0818160:CDS
TATATCAACCAAACCACCTA+AGG 0.545265 5_3:+53713035 Msa0818160:CDS
TTTAGAGCCAATGGAGGGTG+TGG 0.547065 5_3:+53711370 Msa0818160:CDS
TTTAGAGCCAATGGAGGGTG+TGG 0.547065 5_3:+53714742 Msa0818160:CDS
AGTTTGTATGTTGTAGATGA+AGG 0.547849 5_3:+53715528 Msa0818160:three_prime_UTR
TCTTCAAGCCAAAGTGGCTG+AGG 0.551128 5_3:+53709186 Msa0818160:CDS
AGTTTCTCTGCATAGCCAGA+AGG 0.553914 5_3:+53715377 Msa0818160:CDS
GTTTCTCTGCATAGCCAGAA+GGG 0.554251 5_3:+53715378 Msa0818160:CDS
GTTTCCCTGCATAGCCAGAA+GGG 0.556734 5_3:+53712006 Msa0818160:CDS
ATCTCCCTTCTGGCTATGCA+GGG 0.556839 5_3:-53712010 None:intergenic
TGGAGCTCATTAGATGCTTG+AGG 0.557147 5_3:+53709089 Msa0818160:CDS
AAGCATCTAATGAGCTCCAC+AGG 0.560130 5_3:-53709085 None:intergenic
AGTTTCCCTGCATAGCCAGA+AGG 0.561034 5_3:+53712005 Msa0818160:CDS
AACGACTGGTCCGGATAATG+AGG 0.561220 5_3:+53711420 Msa0818160:CDS
AACGACTGGTCCGGATAATG+AGG 0.561220 5_3:+53714792 Msa0818160:CDS
CTTATGGCCTAATGCATCCA+AGG 0.566610 5_3:+53708696 Msa0818160:CDS
ATGTTGATGTTCTTCATGGA+AGG 0.566931 5_3:+53708722 Msa0818160:CDS
TCCAGATCTTCAAGCCAAAG+TGG 0.567810 5_3:+53709180 Msa0818160:CDS
TGAGTTTAATGTTATTGTTG+AGG 0.569215 5_3:-53706557 None:intergenic
TATATGAAATAATGAGACAA+GGG 0.570160 5_3:-53708568 None:intergenic
TGGAGTAAGATGGTCTTCTA+GGG 0.570432 5_3:-53709161 None:intergenic
GGATGATTCACTGCACGGAA+AGG 0.571504 5_3:+53709712 Msa0818160:CDS
GGATGATTCACTGCACGGAA+AGG 0.571504 5_3:+53713092 Msa0818160:CDS
CTAGTTCCGGAACAGTAAGC+GGG 0.572544 5_3:-53711879 None:intergenic
CTAGTTCCGGAACAGTAAGC+GGG 0.572544 5_3:-53715251 None:intergenic
TTTCTGAGTATTGTTCAAAG+AGG 0.578422 5_3:-53706759 None:intergenic
CTTCAGGCGACGATGAAGCG+TGG 0.578988 5_3:+53709735 Msa0818160:CDS
CTTCAGGCGACGATGAAGCG+TGG 0.578988 5_3:+53713115 Msa0818160:CDS
CTTGAAGATCTGGAGTAAGA+TGG 0.581839 5_3:-53709171 None:intergenic
GGAGACATACTATTTGTACC+TGG 0.581909 5_3:+53712958 Msa0818160:CDS
AGATCACTTTGGCTGATGCA+TGG 0.591647 5_3:+53711343 Msa0818160:CDS
AGATCACTTTGGCTGATGCA+TGG 0.591647 5_3:+53714715 Msa0818160:CDS
GTGACTGTATATATGGGAGA+AGG 0.593969 5_3:+53711585 Msa0818160:CDS
GTGACTGTATATATGGGAGA+AGG 0.593969 5_3:+53714957 Msa0818160:CDS
CTGTATATATGGGAGAAGGA+TGG 0.596370 5_3:+53711589 Msa0818160:CDS
CTGTATATATGGGAGAAGGA+TGG 0.596370 5_3:+53714961 Msa0818160:CDS
TTACTCAGAAGAATATTCTG+AGG 0.598350 5_3:+53710669 Msa0818160:CDS
TTACTCAGAAGAATATTCTG+AGG 0.598350 5_3:+53714050 Msa0818160:CDS
TGTATGTTGTAGATGAAGGA+TGG 0.600989 5_3:+53715532 Msa0818160:three_prime_UTR
AAATAGATCCGGAGAAAGTG+AGG 0.601407 5_3:+53710035 Msa0818160:CDS
AAATAGATCCGGAGAAAGTG+AGG 0.601407 5_3:+53713415 Msa0818160:CDS
TCAAATACCTCGTTCCATGT+AGG 0.605540 5_3:-53711853 None:intergenic
TCAAATACCTCGTTCCATGT+AGG 0.605540 5_3:-53715225 None:intergenic
ATTCATGCTGGGAAGTCGAA+AGG 0.606432 5_3:+53709992 Msa0818160:CDS
ATTCATGCTGGGAAGTCGAA+AGG 0.606432 5_3:+53713372 Msa0818160:CDS
TACTCAGAAGAATATTCTGA+GGG 0.607678 5_3:+53710670 Msa0818160:CDS
TACTCAGAAGAATATTCTGA+GGG 0.607678 5_3:+53714051 Msa0818160:CDS
GTACAGTCATTAAGATGTGT+CGG 0.610664 5_3:+53715495 Msa0818160:three_prime_UTR
GCTAGTTCCGGAACAGTAAG+CGG 0.611031 5_3:-53711880 None:intergenic
GCTAGTTCCGGAACAGTAAG+CGG 0.611031 5_3:-53715252 None:intergenic
AAAGAGGATGATTCACTGCA+CGG 0.615717 5_3:+53709707 Msa0818160:CDS
AAAGAGGATGATTCACTGCA+CGG 0.615717 5_3:+53713087 Msa0818160:CDS
AGCGTTGCAGAGAGGTGTAA+GGG 0.624722 5_3:+53708660 Msa0818160:CDS
CCTGTTTCGGAGCTAAGGAG+TGG 0.625863 5_3:+53711973 Msa0818160:CDS
CCTGTTTCGGAGCTAAGGAG+TGG 0.625863 5_3:+53715345 Msa0818160:CDS
GTGAACTTCTATACGAAGAA+GGG 0.630679 5_3:-53711902 None:intergenic
GTGAACTTCTATACGAAGAA+GGG 0.630679 5_3:-53715274 None:intergenic
CGAAAGGAGGAATAGACGCA+TGG 0.636517 5_3:+53710008 Msa0818160:CDS
CGAAAGGAGGAATAGACGCA+TGG 0.636517 5_3:+53713388 Msa0818160:CDS
TCAGGCGACGATGAAGCGTG+GGG 0.637108 5_3:+53709737 Msa0818160:CDS
TCAGGCGACGATGAAGCGTG+GGG 0.637108 5_3:+53713117 Msa0818160:CDS
GGAGACATACTATATGTACC+TGG 0.641489 5_3:+53709578 Msa0818160:CDS
GTCACAATTCCTATCTAACC+GGG 0.642865 5_3:+53708596 Msa0818160:CDS
CATGCTGGGAAGTCGAAAGG+AGG 0.643715 5_3:+53709995 Msa0818160:CDS
CATGCTGGGAAGTCGAAAGG+AGG 0.643715 5_3:+53713375 Msa0818160:CDS
CAATTGAAGGTAAAAGAGCA+AGG 0.649160 5_3:-53706954 None:intergenic
TAGGACATTGACTACTCCTG+TGG 0.652547 5_3:+53709069 Msa0818160:intron
GGAATGTTTAGAGCCAATGG+AGG 0.657335 5_3:+53711364 Msa0818160:CDS
GGAATGTTTAGAGCCAATGG+AGG 0.657335 5_3:+53714736 Msa0818160:CDS
ATATATGAAATAATGAGACA+AGG 0.660350 5_3:-53708569 None:intergenic
GAATGTTTAGAGCCAATGGA+GGG 0.667916 5_3:+53711365 Msa0818160:CDS
GAATGTTTAGAGCCAATGGA+GGG 0.667916 5_3:+53714737 Msa0818160:CDS
CTTTATATTCTGGAGCTACG+TGG 0.670500 5_3:-53709958 None:intergenic
CTTTATATTCTGGAGCTACG+TGG 0.670500 5_3:-53713338 None:intergenic
ACTCTTGCATAGAAATCTGG+AGG 0.672637 5_3:-53711651 None:intergenic
ACTCTTGCATAGAAATCTGG+AGG 0.672637 5_3:-53715023 None:intergenic
CTGGCTGCCTACATGGAACG+AGG 0.693778 5_3:+53711846 Msa0818160:CDS
CTGGCTGCCTACATGGAACG+AGG 0.693778 5_3:+53715218 Msa0818160:CDS
ACAAGGGTAATGTCATGTCA+TGG 0.693829 5_3:-53708552 None:intergenic
CAGGCGACGATGAAGCGTGG+GGG 0.695861 5_3:+53709738 Msa0818160:CDS
CAGGCGACGATGAAGCGTGG+GGG 0.695861 5_3:+53713118 Msa0818160:CDS
ATCGTGAAAGCGTTGCAGAG+AGG 0.719532 5_3:+53708652 Msa0818160:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTTATTATTAAATCAG+CGG - chr5_3:53707770-53707789 None:intergenic 10.0%
!!! TTTACATTTTTTTAATCTAT+AGG + chr5_3:53709050-53709069 Msa0818160:intron 10.0%
!!! AAGTTAAAATAATTTTACAT+AGG + chr5_3:53712502-53712521 Msa0818160:intron 10.0%
!! AGTTATATCCTATAATAAAA+GGG - chr5_3:53708066-53708085 None:intergenic 15.0%
!!! ATTTTCAAGAAAATAATTTC+TGG - chr5_3:53709016-53709035 None:intergenic 15.0%
!!! ATTATGTCTAAATTTTTAGA+TGG + chr5_3:53709541-53709560 Msa0818160:intron 15.0%
!!! CACTTCAATTAATAATTTTA+GGG + chr5_3:53709832-53709851 Msa0818160:intron 15.0%
!!! TAATTTTGACGAAATTTAAA+AGG + chr5_3:53710377-53710396 Msa0818160:intron 15.0%
!!! GATAGTATTTTTCTAATATT+CGG + chr5_3:53710406-53710425 Msa0818160:intron 15.0%
!!! CTATTTTCTTAAAATATTAC+AGG - chr5_3:53710979-53710998 None:intergenic 15.0%
!!! TATATTATTGATTATGATGT+TGG + chr5_3:53711270-53711289 Msa0818160:intron 15.0%
!! AATATTAAATTAGATACACT+TGG - chr5_3:53711521-53711540 None:intergenic 15.0%
!!! TGATTTGATAATTTAAATAC+AGG + chr5_3:53711762-53711781 Msa0818160:intron 15.0%
!! ATAGTATAATGAAAAAAACA+AGG + chr5_3:53711809-53711828 Msa0818160:CDS 15.0%
!! TAGTATAATGAAAAAAACAA+GGG + chr5_3:53711810-53711829 Msa0818160:CDS 15.0%
!!! TTAAAATAATTTTACATAGG+CGG + chr5_3:53712505-53712524 Msa0818160:intron 15.0%
!!! ATTATGTCTAAATTTTTAGA+TGG + chr5_3:53709541-53709560 Msa0818160:intron 15.0%
!!! CACTTCAATTAATAATTTTA+GGG + chr5_3:53709832-53709851 Msa0818160:intron 15.0%
!!! TAATTTTGACGAAATTTAAA+AGG + chr5_3:53710377-53710396 Msa0818160:intron 15.0%
!!! GATAGTATTTTTCTAATATT+CGG + chr5_3:53710406-53710425 Msa0818160:intron 15.0%
!! AATATTAAATTAGATACACT+TGG - chr5_3:53711521-53711540 None:intergenic 15.0%
!!! TGATTTGATAATTTAAATAC+AGG + chr5_3:53711762-53711781 Msa0818160:intron 15.0%
!! ATAGTATAATGAAAAAAACA+AGG + chr5_3:53711809-53711828 Msa0818160:CDS 15.0%
!! TAGTATAATGAAAAAAACAA+GGG + chr5_3:53711810-53711829 Msa0818160:CDS 15.0%
!! TTATGTTCTCATAAATAATT+CGG + chr5_3:53715450-53715469 Msa0818160:three_prime_UTR 15.0%
!!! TTTCAATTAAGAATCTTTTG+AGG - chr5_3:53706807-53706826 None:intergenic 20.0%
!!! TTGTCTTTTATTGTCAATTT+AGG + chr5_3:53707180-53707199 Msa0818160:intron 20.0%
!! GATGTATTTAATGTAGAATT+CGG - chr5_3:53707324-53707343 None:intergenic 20.0%
!! TCAAACAAAATTGATGTATT+TGG - chr5_3:53707584-53707603 None:intergenic 20.0%
!!! TTTTTGCTTATATTTTGCAA+CGG + chr5_3:53707488-53707507 Msa0818160:intron 20.0%
!! TATATGCTAAGTATATACTT+TGG + chr5_3:53707633-53707652 Msa0818160:intron 20.0%
!! ACATTGTGAACTATATTTAT+TGG - chr5_3:53707889-53707908 None:intergenic 20.0%
!! GTATTGTACTATAATGAAAA+AGG - chr5_3:53708044-53708063 None:intergenic 20.0%
!! CAGTTATATCCTATAATAAA+AGG - chr5_3:53708067-53708086 None:intergenic 20.0%
!!! CTTTTATTATAGGATATAAC+TGG + chr5_3:53708065-53708084 Msa0818160:intron 20.0%
!!! CGTTTTGTTAATAAAAGTTA+TGG - chr5_3:53708432-53708451 None:intergenic 20.0%
!! TATATGAAATAATGAGACAA+GGG - chr5_3:53708571-53708590 None:intergenic 20.0%
!! ATATATGAAATAATGAGACA+AGG - chr5_3:53708572-53708591 None:intergenic 20.0%
!! TCTCATTATTTCATATATAC+TGG + chr5_3:53708574-53708593 Msa0818160:CDS 20.0%
!! TCATTATCAAAGAAAATAGA+AGG - chr5_3:53708792-53708811 None:intergenic 20.0%
!!! AAATAATTTCTGGATACAAT+TGG - chr5_3:53709006-53709025 None:intergenic 20.0%
!! AATTGAAGTGCAAATAAAAT+TGG - chr5_3:53709822-53709841 None:intergenic 20.0%
!!! GCACTTCAATTAATAATTTT+AGG + chr5_3:53709831-53709850 Msa0818160:intron 20.0%
!! CATATAAATTTCCATCTTTA+GGG + chr5_3:53709869-53709888 Msa0818160:intron 20.0%
!! CATTCATTTCAAACATAAAA+AGG - chr5_3:53710153-53710172 None:intergenic 20.0%
!!! TATCTAATAGGAAAATGTTT+TGG + chr5_3:53710548-53710567 Msa0818160:intron 20.0%
!!! ATTTTTATTTACCTGATTGT+TGG + chr5_3:53710634-53710653 Msa0818160:intron 20.0%
!! TCAAATTATAATCCCTTAAT+TGG + chr5_3:53710722-53710741 Msa0818160:CDS 20.0%
!! CAAATTATAATCCCTTAATT+GGG + chr5_3:53710723-53710742 Msa0818160:CDS 20.0%
!! GAAGTATGATATTACTATAT+TGG - chr5_3:53711553-53711572 None:intergenic 20.0%
!! AAATTGTTTATAAGCTATTC+TGG - chr5_3:53711727-53711746 None:intergenic 20.0%
!!! TTGATAATTTAAATACAGGT+TGG + chr5_3:53711766-53711785 Msa0818160:intron 20.0%
!! TGATAATTTAAATACAGGTT+GGG + chr5_3:53711767-53711786 Msa0818160:intron 20.0%
!!! TTTTCATTATACTATCACTA+GGG - chr5_3:53711804-53711823 None:intergenic 20.0%
!!! TTTTTCATTATACTATCACT+AGG - chr5_3:53711805-53711824 None:intergenic 20.0%
!!! ATTCATATACATGAAAGTTT+TGG + chr5_3:53712284-53712303 Msa0818160:intron 20.0%
!!! TAAAATAATTTTACATAGGC+GGG + chr5_3:53712506-53712525 Msa0818160:intron 20.0%
!! AATTGAAGTGCAAATAAAAT+TGG - chr5_3:53709822-53709841 None:intergenic 20.0%
!!! GCACTTCAATTAATAATTTT+AGG + chr5_3:53709831-53709850 Msa0818160:intron 20.0%
!! CATATAAATTTCCATCTTTA+GGG + chr5_3:53709869-53709888 Msa0818160:intron 20.0%
!! CATTCATTTCAAACATAAAA+AGG - chr5_3:53710153-53710172 None:intergenic 20.0%
!!! TTATTGATTTTTTTTGTACG+TGG - chr5_3:53710263-53710282 None:intergenic 20.0%
!!! TATCTAATAGGAAAATGTTT+TGG + chr5_3:53710548-53710567 Msa0818160:intron 20.0%
!!! ATTTTTATTTACCTGATTGT+TGG + chr5_3:53710634-53710653 Msa0818160:intron 20.0%
!! TCAAATTATAATCCCTTAAT+TGG + chr5_3:53710722-53710741 Msa0818160:CDS 20.0%
!! CAAATTATAATCCCTTAATT+GGG + chr5_3:53710723-53710742 Msa0818160:CDS 20.0%
!!! CTATTTTCTCAAAATATTAC+TGG - chr5_3:53714348-53714367 None:intergenic 20.0%
!!! GATTTTATCATATTAGATGT+GGG - chr5_3:53714624-53714643 None:intergenic 20.0%
!!! AGATTTTATCATATTAGATG+TGG - chr5_3:53714625-53714644 None:intergenic 20.0%
!!! TCTATTATTGATAATGATGT+TGG + chr5_3:53714642-53714661 Msa0818160:intron 20.0%
!! GAAGTATGATATTACTATAT+TGG - chr5_3:53711553-53711572 None:intergenic 20.0%
!! AAATTGTTTATAAGCTATTC+TGG - chr5_3:53711727-53711746 None:intergenic 20.0%
!!! TTGATAATTTAAATACAGGT+TGG + chr5_3:53711766-53711785 Msa0818160:intron 20.0%
!! TGATAATTTAAATACAGGTT+GGG + chr5_3:53711767-53711786 Msa0818160:intron 20.0%
!!! TTTTCATTATACTATCACTA+GGG - chr5_3:53711804-53711823 None:intergenic 20.0%
!!! TTTTTCATTATACTATCACT+AGG - chr5_3:53711805-53711824 None:intergenic 20.0%
!!! ATTCATATACATGAAAGTTT+TGG + chr5_3:53712284-53712303 Msa0818160:intron 20.0%
! TGAGTTTAATGTTATTGTTG+AGG - chr5_3:53706560-53706579 None:intergenic 25.0%
!!! ATTGTGTTTTGTTTTGGATT+TGG - chr5_3:53706643-53706662 None:intergenic 25.0%
!!! ATGATGATTGTGTTTTGTTT+TGG - chr5_3:53706649-53706668 None:intergenic 25.0%
!! TTTCAAGCATTTTCATAGAA+GGG + chr5_3:53706879-53706898 Msa0818160:CDS 25.0%
! TTCAATTATGTTGTTCTTTG+TGG + chr5_3:53707084-53707103 Msa0818160:intron 25.0%
!!! AAAATGAAAGGCATTAAACA+AGG - chr5_3:53707134-53707153 None:intergenic 25.0%
! ACAAAAACTGAGAAAATGAA+AGG - chr5_3:53707146-53707165 None:intergenic 25.0%
! TCAAAAATCGTTGATGTATT+TGG + chr5_3:53707545-53707564 Msa0818160:intron 25.0%
!! GATGTATTTGGTTCAAAATT+TGG - chr5_3:53707572-53707591 None:intergenic 25.0%
!! TTCTTCTTTTGTAAAGTACA+CGG + chr5_3:53707989-53708008 Msa0818160:intron 25.0%
!! GTACAATACCCTTTTATTAT+AGG + chr5_3:53708055-53708074 Msa0818160:intron 25.0%
!!! ATATAACTGGTTCTAAATTG+TGG + chr5_3:53708078-53708097 Msa0818160:intron 25.0%
! TATCTAAATGCTTCATATTG+TGG - chr5_3:53708122-53708141 None:intergenic 25.0%
!!! TATCCCATAGTTCTAAATTA+TGG - chr5_3:53708241-53708260 None:intergenic 25.0%
! GGTTGAATTGTATAGAATTA+AGG - chr5_3:53708378-53708397 None:intergenic 25.0%
! AGGCGATTAAAGTATAAAAT+TGG - chr5_3:53708772-53708791 None:intergenic 25.0%
!! GCTACAAATTCTAGTATTTT+CGG + chr5_3:53708840-53708859 Msa0818160:intron 25.0%
! GTAAAAATGATATGCTGATA+TGG - chr5_3:53708979-53708998 None:intergenic 25.0%
! TTAGTTAACTGAAGTTGTAT+TGG + chr5_3:53709209-53709228 Msa0818160:intron 25.0%
! TAGTTAACTGAAGTTGTATT+GGG + chr5_3:53709210-53709229 Msa0818160:intron 25.0%
! AAAAGAAGTAAAGGAAAAAG+AGG + chr5_3:53709691-53709710 Msa0818160:CDS 25.0%
! GCATATAAATTTCCATCTTT+AGG + chr5_3:53709868-53709887 Msa0818160:intron 25.0%
!! TAAAGAATATTTTCATGACG+AGG + chr5_3:53709904-53709923 Msa0818160:CDS 25.0%
! GCAATTAAACCTTTATATTC+TGG - chr5_3:53709971-53709990 None:intergenic 25.0%
! GGATATCAAATAGGAATTAT+AGG - chr5_3:53710319-53710338 None:intergenic 25.0%
! TTGACGAAATTTAAAAGGAA+CGG + chr5_3:53710382-53710401 Msa0818160:intron 25.0%
! AAGTAGTAGAATTTCAATCA+GGG - chr5_3:53710450-53710469 None:intergenic 25.0%
! AAAGTAGTAGAATTTCAATC+AGG - chr5_3:53710451-53710470 None:intergenic 25.0%
!!! TGAAATTCTACTACTTTTGT+TGG + chr5_3:53710454-53710473 Msa0818160:intron 25.0%
! TAAATGTGATACAATACAAC+AGG - chr5_3:53710487-53710506 None:intergenic 25.0%
! GTATTGTATCACATTTATTG+TGG + chr5_3:53710490-53710509 Msa0818160:intron 25.0%
!!! TATTAGATAGATCAAGTTGA+TGG - chr5_3:53710537-53710556 None:intergenic 25.0%
! ATCAACTTGATCTATCTAAT+AGG + chr5_3:53710536-53710555 Msa0818160:intron 25.0%
! AAATGAAAAAACACTGAAGA+GGG - chr5_3:53710800-53710819 None:intergenic 25.0%
! AAAATGAAAAAACACTGAAG+AGG - chr5_3:53710801-53710820 None:intergenic 25.0%
!! TAAAATATTTTGTCAGCACT+TGG - chr5_3:53710880-53710899 None:intergenic 25.0%
! ATTATAAATCCTGCTCAAAA+AGG - chr5_3:53711130-53711149 None:intergenic 25.0%
! TATGGAAATAAGCTGAAAAA+AGG - chr5_3:53711698-53711717 None:intergenic 25.0%
! TACAAATACATTAAATGACG+TGG + chr5_3:53712459-53712478 Msa0818160:intron 25.0%
! TAATGGAGATAAGCTAAAAA+CGG + chr5_3:53712774-53712793 Msa0818160:intron 25.0%
! AAAAGAAGTAAAGGAAAAAG+AGG + chr5_3:53709691-53709710 Msa0818160:CDS 25.0%
! GCATATAAATTTCCATCTTT+AGG + chr5_3:53709868-53709887 Msa0818160:intron 25.0%
!! TAAAGAATATTTTCATGACG+AGG + chr5_3:53709904-53709923 Msa0818160:CDS 25.0%
! GCAATTAAACCTTTATATTC+TGG - chr5_3:53709971-53709990 None:intergenic 25.0%
! GGATATCAAATAGGAATTAT+AGG - chr5_3:53710319-53710338 None:intergenic 25.0%
! TTGACGAAATTTAAAAGGAA+CGG + chr5_3:53710382-53710401 Msa0818160:intron 25.0%
! AAGTAGTAGAATTTCAATCA+GGG - chr5_3:53710450-53710469 None:intergenic 25.0%
! AAAGTAGTAGAATTTCAATC+AGG - chr5_3:53710451-53710470 None:intergenic 25.0%
!!! TGAAATTCTACTACTTTTGT+TGG + chr5_3:53710454-53710473 Msa0818160:intron 25.0%
! TAAATGTGATACAATACAAC+AGG - chr5_3:53710487-53710506 None:intergenic 25.0%
! GTATTGTATCACATTTATTG+TGG + chr5_3:53710490-53710509 Msa0818160:intron 25.0%
!!! TATTAGATAGATCAAGTTGA+TGG - chr5_3:53710537-53710556 None:intergenic 25.0%
! ATCAACTTGATCTATCTAAT+AGG + chr5_3:53710536-53710555 Msa0818160:intron 25.0%
! AAATGAAAAAACACTGAAGA+GGG - chr5_3:53710800-53710819 None:intergenic 25.0%
! AAAATGAAAAAACACTGAAG+AGG - chr5_3:53710801-53710820 None:intergenic 25.0%
!! TAAAATATTTTGTCAGCACT+TGG - chr5_3:53710880-53710899 None:intergenic 25.0%
! ATTATAAATCCTGCTCAAAA+AGG - chr5_3:53711130-53711149 None:intergenic 25.0%
! TATGGAAATAAGCTGAAAAA+AGG - chr5_3:53711698-53711717 None:intergenic 25.0%
! TTTGGATTTGGTTATGTTTG+TGG - chr5_3:53706631-53706650 None:intergenic 30.0%
! TTCTGAGTATTGTTCAAAGA+GGG - chr5_3:53706761-53706780 None:intergenic 30.0%
! TTTCTGAGTATTGTTCAAAG+AGG - chr5_3:53706762-53706781 None:intergenic 30.0%
!!! AAGAATCTTTTGAGGTTTGA+AGG - chr5_3:53706799-53706818 None:intergenic 30.0%
! GTTTCAAGCATTTTCATAGA+AGG + chr5_3:53706878-53706897 Msa0818160:CDS 30.0%
! TTCAAGCATTTTCATAGAAG+GGG + chr5_3:53706880-53706899 Msa0818160:CDS 30.0%
! TTGCTCTTTTACCTTCAATT+GGG + chr5_3:53706956-53706975 Msa0818160:CDS 30.0%
! TTTTTACTTACCCCAATTGA+AGG - chr5_3:53706970-53706989 None:intergenic 30.0%
CTTGTACTACATAGTAATTC+AGG + chr5_3:53707232-53707251 Msa0818160:intron 30.0%
! CTTTTGCTAATATTTTGCAG+CGG + chr5_3:53707360-53707379 Msa0818160:intron 30.0%
ATATAATCAAAAGTGAGCCA+AGG + chr5_3:53707406-53707425 Msa0818160:intron 30.0%
CAAAATACATCAACTTTCCT+TGG - chr5_3:53707426-53707445 None:intergenic 30.0%
!!! CAAGTACATTAGTTTTCTAG+GGG - chr5_3:53707668-53707687 None:intergenic 30.0%
!!! GCAAGTACATTAGTTTTCTA+GGG - chr5_3:53707669-53707688 None:intergenic 30.0%
!!! TGCAAGTACATTAGTTTTCT+AGG - chr5_3:53707670-53707689 None:intergenic 30.0%
TGCAGTCATTCATTGTATTA+AGG + chr5_3:53707686-53707705 Msa0818160:intron 30.0%
GCAGTCATTCATTGTATTAA+GGG + chr5_3:53707687-53707706 Msa0818160:intron 30.0%
ATTCATTGTATTAAGGGTGA+AGG + chr5_3:53707693-53707712 Msa0818160:intron 30.0%
ACATGGTGAACTATATGTAT+TGG + chr5_3:53707719-53707738 Msa0818160:intron 30.0%
!!! TATTTTTTATTTCACCGCGA+TGG - chr5_3:53707746-53707765 None:intergenic 30.0%
CTATATTTATTGGTCCATCA+TGG - chr5_3:53707879-53707898 None:intergenic 30.0%
TTGCAACAAAATCACAATTG+CGG + chr5_3:53708154-53708173 Msa0818160:intron 30.0%
TAGCATAATATCAAAGTTCG+CGG + chr5_3:53708204-53708223 Msa0818160:intron 30.0%
! CGACCATAATTTAGAACTAT+GGG + chr5_3:53708235-53708254 Msa0818160:intron 30.0%
! ATTACTTTAAGGAGGGTTTA+AGG + chr5_3:53708406-53708425 Msa0818160:intron 30.0%
CTCGTAAATCATCATTACTT+AGG + chr5_3:53708452-53708471 Msa0818160:intron 30.0%
!!! TGTGTTTTTTGTTGTATTCC+AGG + chr5_3:53708525-53708544 Msa0818160:intron 30.0%
AAGAACATCAACATTATCCT+TGG - chr5_3:53708716-53708735 None:intergenic 30.0%
GATAATGTTGATGTTCTTCA+TGG + chr5_3:53708718-53708737 Msa0818160:CDS 30.0%
ATAAGCACTTAGATACTGTT+TGG - chr5_3:53709461-53709480 None:intergenic 30.0%
TCAAATAAGTCAATCTTGAC+AGG + chr5_3:53709495-53709514 Msa0818160:intron 30.0%
TAGATGGTTACTTCAACATT+TGG + chr5_3:53709557-53709576 Msa0818160:intron 30.0%
!!! TTTTTAAGTGATTCAGGAGA+AGG - chr5_3:53709626-53709645 None:intergenic 30.0%
!!! ATCCTCTTTTTAAGTGATTC+AGG - chr5_3:53709632-53709651 None:intergenic 30.0%
AACCTTAAAACGCCAATTAA+CGG - chr5_3:53710236-53710255 None:intergenic 30.0%
TGTGAAATGGGATATCAAAT+AGG - chr5_3:53710328-53710347 None:intergenic 30.0%
CAGAGTGAAATATGTGAAAT+GGG - chr5_3:53710340-53710359 None:intergenic 30.0%
GATACAATACAACAGGAAAA+TGG - chr5_3:53710480-53710499 None:intergenic 30.0%
TTACTCAGAAGAATATTCTG+AGG + chr5_3:53710669-53710688 Msa0818160:CDS 30.0%
TACTCAGAAGAATATTCTGA+GGG + chr5_3:53710670-53710689 Msa0818160:CDS 30.0%
ATTATAATCCCTTAATTGGG+TGG + chr5_3:53710726-53710745 Msa0818160:CDS 30.0%
AGTGTTAACTTAATCTCACA+TGG - chr5_3:53711207-53711226 None:intergenic 30.0%
!!! AAGTTAGTTTTCATTGTGCT+TGG + chr5_3:53711300-53711319 Msa0818160:intron 30.0%
AAATTAGATACACTTGGATG+AGG - chr5_3:53711515-53711534 None:intergenic 30.0%
ATCATACTTCACTTGTTCTT+AGG + chr5_3:53711563-53711582 Msa0818160:intron 30.0%
TTCTTAGGTGACTGTATATA+TGG + chr5_3:53711578-53711597 Msa0818160:intron 30.0%
TCTTAGGTGACTGTATATAT+GGG + chr5_3:53711579-53711598 Msa0818160:intron 30.0%
AATAATGTGTTTGTGCTGTA+AGG + chr5_3:53712201-53712220 Msa0818160:intron 30.0%
TCAAATAAGTCAATCTTGAC+AGG + chr5_3:53709495-53709514 Msa0818160:intron 30.0%
TAGATGGTTACTTCAACATT+TGG + chr5_3:53709557-53709576 Msa0818160:intron 30.0%
!!! TTTTTAAGTGATTCAGGAGA+AGG - chr5_3:53709626-53709645 None:intergenic 30.0%
!!! ATCCTCTTTTTAAGTGATTC+AGG - chr5_3:53709632-53709651 None:intergenic 30.0%
AACCTTAAAACGCCAATTAA+CGG - chr5_3:53710236-53710255 None:intergenic 30.0%
TGTGAAATGGGATATCAAAT+AGG - chr5_3:53710328-53710347 None:intergenic 30.0%
CAGAGTGAAATATGTGAAAT+GGG - chr5_3:53710340-53710359 None:intergenic 30.0%
GATACAATACAACAGGAAAA+TGG - chr5_3:53710480-53710499 None:intergenic 30.0%
TTACTCAGAAGAATATTCTG+AGG + chr5_3:53710669-53710688 Msa0818160:CDS 30.0%
TACTCAGAAGAATATTCTGA+GGG + chr5_3:53710670-53710689 Msa0818160:CDS 30.0%
ATTATAATCCCTTAATTGGG+TGG + chr5_3:53710726-53710745 Msa0818160:CDS 30.0%
!!! AAGTTAGTTTTCATTGTGCT+TGG + chr5_3:53711300-53711319 Msa0818160:intron 30.0%
AAATTAGATACACTTGGATG+AGG - chr5_3:53711515-53711534 None:intergenic 30.0%
ATCATACTTCACTTGTTCTT+AGG + chr5_3:53711563-53711582 Msa0818160:intron 30.0%
TTCTTAGGTGACTGTATATA+TGG + chr5_3:53711578-53711597 Msa0818160:intron 30.0%
TCTTAGGTGACTGTATATAT+GGG + chr5_3:53711579-53711598 Msa0818160:intron 30.0%
AGTTTGTATGTTGTAGATGA+AGG + chr5_3:53715528-53715547 Msa0818160:three_prime_UTR 30.0%
AATAATGTGTTTGTGCTGTA+AGG + chr5_3:53712201-53712220 Msa0818160:intron 30.0%
CTATTGTTTGTGTGTTGTGT+TGG - chr5_3:53706590-53706609 None:intergenic 35.0%
CATACAGTGTTTGTTTATGC+TGG + chr5_3:53706686-53706705 Msa0818160:CDS 35.0%
CAATTGAAGGTAAAAGAGCA+AGG - chr5_3:53706957-53706976 None:intergenic 35.0%
! CTTGCTCTTTTACCTTCAAT+TGG + chr5_3:53706955-53706974 Msa0818160:CDS 35.0%
! TGCTCTTTTACCTTCAATTG+GGG + chr5_3:53706957-53706976 Msa0818160:CDS 35.0%
!!! CTGAACCTTGTCATGTTTTT+TGG + chr5_3:53707035-53707054 Msa0818160:intron 35.0%
GTTGACCAAAAAACATGACA+AGG - chr5_3:53707043-53707062 None:intergenic 35.0%
TGGTCAACTGAATCTGTATT+TGG + chr5_3:53707055-53707074 Msa0818160:intron 35.0%
ATTAAGGGTGAAGGTTAACA+TGG + chr5_3:53707702-53707721 Msa0818160:intron 35.0%
TTCTTGTTAGTTCACCATGA+TGG + chr5_3:53707862-53707881 Msa0818160:intron 35.0%
! TTTTGTAAAGTACACGGCAT+TGG + chr5_3:53707995-53708014 Msa0818160:intron 35.0%
TACAATGCCAAAAAATGCAG+CGG - chr5_3:53708186-53708205 None:intergenic 35.0%
! GCGACCATAATTTAGAACTA+TGG + chr5_3:53708234-53708253 Msa0818160:intron 35.0%
TGTTCACACTTTACACACTT+CGG + chr5_3:53708322-53708341 Msa0818160:intron 35.0%
! ACACTTCGGTTATTTAGTTC+AGG + chr5_3:53708336-53708355 Msa0818160:intron 35.0%
TCCTTAAAGTAATACCTTGG+GGG - chr5_3:53708399-53708418 None:intergenic 35.0%
CTCCTTAAAGTAATACCTTG+GGG - chr5_3:53708400-53708419 None:intergenic 35.0%
CCTCCTTAAAGTAATACCTT+GGG - chr5_3:53708401-53708420 None:intergenic 35.0%
! CCAAGGTATTACTTTAAGGA+GGG + chr5_3:53708399-53708418 Msa0818160:intron 35.0%
ACATTATCCTTGGATGCATT+AGG - chr5_3:53708706-53708725 None:intergenic 35.0%
ATGTTGATGTTCTTCATGGA+AGG + chr5_3:53708722-53708741 Msa0818160:CDS 35.0%
!! TCTTTGATAATGATGTCACC+TGG + chr5_3:53708799-53708818 Msa0818160:intron 35.0%
! ATTTTTGCTGCAATTCAACC+AGG - chr5_3:53708820-53708839 None:intergenic 35.0%
TAGATGCTTGAGGTCTATTA+AGG + chr5_3:53709099-53709118 Msa0818160:CDS 35.0%
!! TCTTCTAGGGTTATTACAAC+CGG - chr5_3:53709151-53709170 None:intergenic 35.0%
GAATGGAGATAAGCCAAAAT+CGG + chr5_3:53709394-53709413 Msa0818160:intron 35.0%
ATACTGTTTGGAAGAGCTTA+TGG - chr5_3:53709449-53709468 None:intergenic 35.0%
CTCCTGAATCACTTAAAAAG+AGG + chr5_3:53709627-53709646 Msa0818160:CDS 35.0%
TATATCAACCAAACCACCTA+AGG + chr5_3:53709655-53709674 Msa0818160:CDS 35.0%
! CCTTTACTTCTTTTGTCTCA+AGG - chr5_3:53709685-53709704 None:intergenic 35.0%
CCTTGAGACAAAAGAAGTAA+AGG + chr5_3:53709682-53709701 Msa0818160:CDS 35.0%
AACAAACCTAACTTGAAGCT+CGG - chr5_3:53709773-53709792 None:intergenic 35.0%
!! AGGTTTGTTATCCGATTACA+AGG + chr5_3:53709784-53709803 Msa0818160:CDS 35.0%
TTAGTCTCGTACCTTGTAAT+CGG - chr5_3:53709798-53709817 None:intergenic 35.0%
GTTTAATTGCCATTCATGCT+GGG + chr5_3:53709981-53710000 Msa0818160:CDS 35.0%
AAGTGAGCAACAACTTGAAA+AGG + chr5_3:53710069-53710088 Msa0818160:CDS 35.0%
CTCATGGAAAAGAAATTGTC+AGG + chr5_3:53710101-53710120 Msa0818160:CDS 35.0%
TATATGTTGAGCAACACCAT+GGG - chr5_3:53710200-53710219 None:intergenic 35.0%
ATATATGTTGAGCAACACCA+TGG - chr5_3:53710201-53710220 None:intergenic 35.0%
TTCTTACTACCTCCGTTAAT+TGG + chr5_3:53710221-53710240 Msa0818160:intron 35.0%
GCAGAGTGAAATATGTGAAA+TGG - chr5_3:53710341-53710360 None:intergenic 35.0%
TCACTCTGCAATAAATAGTC+AGG + chr5_3:53710352-53710371 Msa0818160:intron 35.0%
CACTCTGCAATAAATAGTCA+GGG + chr5_3:53710353-53710372 Msa0818160:intron 35.0%
TCAGGGAAATAGAATACAGA+AGG - chr5_3:53710433-53710452 None:intergenic 35.0%
!! ATAGTAGTCTTATGAAGCAC+TGG + chr5_3:53710907-53710926 Msa0818160:intron 35.0%
! TAACTTTGATCTAAAGCGTC+AGG + chr5_3:53711044-53711063 Msa0818160:intron 35.0%
! AACTTTGATCTAAAGCGTCA+GGG + chr5_3:53711045-53711064 Msa0818160:intron 35.0%
! TTCACAGGTAACTTAGCTTT+AGG - chr5_3:53711454-53711473 None:intergenic 35.0%
! TGAAGACTACTTTGAAGGTA+AGG + chr5_3:53711470-53711489 Msa0818160:intron 35.0%
! GAAGACTACTTTGAAGGTAA+GGG + chr5_3:53711471-53711490 Msa0818160:intron 35.0%
CTTACTCTTGCATAGAAATC+TGG - chr5_3:53711657-53711676 None:intergenic 35.0%
GAAAAAAACAAGGGCAATAG+AGG + chr5_3:53711819-53711838 Msa0818160:CDS 35.0%
GTGAACTTCTATACGAAGAA+GGG - chr5_3:53711905-53711924 None:intergenic 35.0%
! ATGTCCGAGAAAGATGATTT+TGG + chr5_3:53711934-53711953 Msa0818160:CDS 35.0%
AGTTGTATTTATCTCCCTTC+TGG - chr5_3:53712023-53712042 None:intergenic 35.0%
GTACAGTCATTAAGATGTGT+CGG + chr5_3:53712119-53712138 Msa0818160:intron 35.0%
AGCTTGTATGTTGTAGATGA+AGG + chr5_3:53712152-53712171 Msa0818160:intron 35.0%
TGTATGTTGTAGATGAAGGA+TGG + chr5_3:53712156-53712175 Msa0818160:intron 35.0%
TGTTGTTGTGTTAGACTTCA+TGG + chr5_3:53712342-53712361 Msa0818160:intron 35.0%
!!! GCTGTTTTTATAACCTAACC+TGG + chr5_3:53712746-53712765 Msa0818160:intron 35.0%
GATAAGCTAAAAACGGCTTA+TGG + chr5_3:53712781-53712800 Msa0818160:intron 35.0%
ATAAGCACTTAGACACTGTT+TGG - chr5_3:53712841-53712860 None:intergenic 35.0%
CTCCTGAATCACTTAAAAAG+AGG + chr5_3:53709627-53709646 Msa0818160:CDS 35.0%
TATATCAACCAAACCACCTA+AGG + chr5_3:53709655-53709674 Msa0818160:CDS 35.0%
! CCTTTACTTCTTTTGTCTCA+AGG - chr5_3:53709685-53709704 None:intergenic 35.0%
CCTTGAGACAAAAGAAGTAA+AGG + chr5_3:53709682-53709701 Msa0818160:CDS 35.0%
AACAAACCTAACTTGAAGCT+CGG - chr5_3:53709773-53709792 None:intergenic 35.0%
!! AGGTTTGTTATCCGATTACA+AGG + chr5_3:53709784-53709803 Msa0818160:CDS 35.0%
TTAGTCTCGTACCTTGTAAT+CGG - chr5_3:53709798-53709817 None:intergenic 35.0%
GTTTAATTGCCATTCATGCT+GGG + chr5_3:53709981-53710000 Msa0818160:CDS 35.0%
AAGTGAGCAACAACTTGAAA+AGG + chr5_3:53710069-53710088 Msa0818160:CDS 35.0%
CTCATGGAAAAGAAATTGTC+AGG + chr5_3:53710101-53710120 Msa0818160:CDS 35.0%
TATATGTTGAGCAACACCAT+GGG - chr5_3:53710200-53710219 None:intergenic 35.0%
ATATATGTTGAGCAACACCA+TGG - chr5_3:53710201-53710220 None:intergenic 35.0%
TTCTTACTACCTCCGTTAAT+TGG + chr5_3:53710221-53710240 Msa0818160:intron 35.0%
GCAGAGTGAAATATGTGAAA+TGG - chr5_3:53710341-53710360 None:intergenic 35.0%
TCACTCTGCAATAAATAGTC+AGG + chr5_3:53710352-53710371 Msa0818160:intron 35.0%
CACTCTGCAATAAATAGTCA+GGG + chr5_3:53710353-53710372 Msa0818160:intron 35.0%
TCAGGGAAATAGAATACAGA+AGG - chr5_3:53710433-53710452 None:intergenic 35.0%
!! ATAGTAGTCTTATGAAGCAC+TGG + chr5_3:53710907-53710926 Msa0818160:intron 35.0%
! AACTTTGATCTAAAGCGTCA+GGG + chr5_3:53711045-53711064 Msa0818160:intron 35.0%
GTGATAGTTGAAATATGAGC+CGG + chr5_3:53711103-53711122 Msa0818160:intron 35.0%
ATGTGAGGTTAAGTTAACAC+TGG + chr5_3:53714576-53714595 Msa0818160:intron 35.0%
! TTCACAGGTAACTTAGCTTT+AGG - chr5_3:53711454-53711473 None:intergenic 35.0%
! TGAAGACTACTTTGAAGGTA+AGG + chr5_3:53711470-53711489 Msa0818160:intron 35.0%
! GAAGACTACTTTGAAGGTAA+GGG + chr5_3:53711471-53711490 Msa0818160:intron 35.0%
CTTACTCTTGCATAGAAATC+TGG - chr5_3:53711657-53711676 None:intergenic 35.0%
GAAAAAAACAAGGGCAATAG+AGG + chr5_3:53711819-53711838 Msa0818160:CDS 35.0%
GTGAACTTCTATACGAAGAA+GGG - chr5_3:53711905-53711924 None:intergenic 35.0%
! ATGTCCGAGAAAGATGATTT+TGG + chr5_3:53711934-53711953 Msa0818160:CDS 35.0%
AGTTGTATTTATCTCCCTTC+TGG - chr5_3:53712023-53712042 None:intergenic 35.0%
GTACAGTCATTAAGATGTGT+CGG + chr5_3:53712119-53712138 Msa0818160:intron 35.0%
TGTATGTTGTAGATGAAGGA+TGG + chr5_3:53712156-53712175 Msa0818160:intron 35.0%
GTTATTGTTGAGGTTGTTGC+TGG - chr5_3:53706550-53706569 None:intergenic 40.0%
! CTATATGTATTGGTCCATCG+CGG + chr5_3:53707729-53707748 Msa0818160:intron 40.0%
TTCATATTGTGGCCACAATG+TGG - chr5_3:53708111-53708130 None:intergenic 40.0%
GAACTATGGGATACACCATA+TGG + chr5_3:53708248-53708267 Msa0818160:intron 40.0%
TCTATACAATTCAACCCCCA+AGG + chr5_3:53708382-53708401 Msa0818160:intron 40.0%
! ACCCCCAAGGTATTACTTTA+AGG + chr5_3:53708395-53708414 Msa0818160:intron 40.0%
! CCCAAGGTATTACTTTAAGG+AGG + chr5_3:53708398-53708417 Msa0818160:intron 40.0%
CCCTCCTTAAAGTAATACCT+TGG - chr5_3:53708402-53708421 None:intergenic 40.0%
ACACAGATCAGAACAAGTAC+AGG - chr5_3:53708510-53708529 None:intergenic 40.0%
ACAAGGGTAATGTCATGTCA+TGG - chr5_3:53708555-53708574 None:intergenic 40.0%
GGTCACAATTCCTATCTAAC+CGG + chr5_3:53708595-53708614 Msa0818160:CDS 40.0%
GTCACAATTCCTATCTAACC+GGG + chr5_3:53708596-53708615 Msa0818160:CDS 40.0%
AGGTGTAAGGGTAATTGAGT+TGG + chr5_3:53708672-53708691 Msa0818160:CDS 40.0%
!! GGGTAATTGAGTTGGACTTA+TGG + chr5_3:53708680-53708699 Msa0818160:CDS 40.0%
!! CTAGTATTTTCGGTGCAATC+TGG + chr5_3:53708850-53708869 Msa0818160:intron 40.0%
CTTTGTCGCATCAGAATTTC+CGG + chr5_3:53709129-53709148 Msa0818160:CDS 40.0%
TGGAGTAAGATGGTCTTCTA+GGG - chr5_3:53709164-53709183 None:intergenic 40.0%
! CTTGAAGATCTGGAGTAAGA+TGG - chr5_3:53709174-53709193 None:intergenic 40.0%
TTAACTAACCTCAGCCACTT+TGG - chr5_3:53709197-53709216 None:intergenic 40.0%
AACCTATCCTTGAGAACGAA+TGG + chr5_3:53709377-53709396 Msa0818160:intron 40.0%
CTTATCTCCATTCGTTCTCA+AGG - chr5_3:53709387-53709406 None:intergenic 40.0%
! GATAAGCCAAAATCGGCTTA+TGG + chr5_3:53709401-53709420 Msa0818160:intron 40.0%
GGAGACATACTATATGTACC+TGG + chr5_3:53709578-53709597 Msa0818160:CDS 40.0%
! TTTGTCTCAAGGTACTCCTT+AGG - chr5_3:53709674-53709693 None:intergenic 40.0%
AAAGAGGATGATTCACTGCA+CGG + chr5_3:53709707-53709726 Msa0818160:CDS 40.0%
ACAAACCTAACTTGAAGCTC+GGG - chr5_3:53709772-53709791 None:intergenic 40.0%
CCAAACTGTTTCCCTAAAGA+TGG - chr5_3:53709883-53709902 None:intergenic 40.0%
! CCATCTTTAGGGAAACAGTT+TGG + chr5_3:53709880-53709899 Msa0818160:intron 40.0%
!! CTTTATATTCTGGAGCTACG+TGG - chr5_3:53709961-53709980 None:intergenic 40.0%
CACGTAGCTCCAGAATATAA+AGG + chr5_3:53709959-53709978 Msa0818160:CDS 40.0%
GGTTTAATTGCCATTCATGC+TGG + chr5_3:53709980-53709999 Msa0818160:CDS 40.0%
AAATAGATCCGGAGAAAGTG+AGG + chr5_3:53710035-53710054 Msa0818160:CDS 40.0%
GAAAAGGCTGCTATAACTCA+TGG + chr5_3:53710085-53710104 Msa0818160:CDS 40.0%
CTTAAAACGCCAATTAACGG+AGG - chr5_3:53710233-53710252 None:intergenic 40.0%
! CTCCGTTAATTGGCGTTTTA+AGG + chr5_3:53710231-53710250 Msa0818160:intron 40.0%
!! ATTCTGAGGGTGTTTCCAAA+AGG + chr5_3:53710683-53710702 Msa0818160:CDS 40.0%
CCATGAATCCACCCAATTAA+GGG - chr5_3:53710737-53710756 None:intergenic 40.0%
TCCATGAATCCACCCAATTA+AGG - chr5_3:53710738-53710757 None:intergenic 40.0%
AATGGTTGCATTCAACATGC+AGG + chr5_3:53710763-53710782 Msa0818160:CDS 40.0%
!! GTTTGTATTTGTGCCGTTTC+TGG - chr5_3:53710941-53710960 None:intergenic 40.0%
GCAGTCATATATGTCACTGT+TGG + chr5_3:53711011-53711030 Msa0818160:intron 40.0%
TATATGTCACTGTTGGACAC+TGG + chr5_3:53711018-53711037 Msa0818160:intron 40.0%
AAATCCTGCTCAAAAAGGAC+TGG - chr5_3:53711125-53711144 None:intergenic 40.0%
! CATGGTAACTTGTGCGAAAA+GGG - chr5_3:53711189-53711208 None:intergenic 40.0%
! ACATGGTAACTTGTGCGAAA+AGG - chr5_3:53711190-53711209 None:intergenic 40.0%
ATTGTGCTTGGTTCCATTGT+AGG + chr5_3:53711312-53711331 Msa0818160:intron 40.0%
TTGTGCTTGGTTCCATTGTA+GGG + chr5_3:53711313-53711332 Msa0818160:intron 40.0%
! CATGGAATGTTTAGAGCCAA+TGG + chr5_3:53711361-53711380 Msa0818160:CDS 40.0%
! GAATGTTTAGAGCCAATGGA+GGG + chr5_3:53711365-53711384 Msa0818160:CDS 40.0%
CCAGTCGTTAAGAGAAAATC+TGG - chr5_3:53711409-53711428 None:intergenic 40.0%
! CCAGATTTTCTCTTAACGAC+TGG + chr5_3:53711406-53711425 Msa0818160:CDS 40.0%
!! TTTTCTCTTAACGACTGGTC+CGG + chr5_3:53711411-53711430 Msa0818160:CDS 40.0%
GGATCAAAGACCTCATTATC+CGG - chr5_3:53711433-53711452 None:intergenic 40.0%
ACCTGTGAAGACTACTTTGA+AGG + chr5_3:53711465-53711484 Msa0818160:CDS 40.0%
ACCTTCAAAGTAGTCTTCAC+AGG - chr5_3:53711469-53711488 None:intergenic 40.0%
GTGACTGTATATATGGGAGA+AGG + chr5_3:53711585-53711604 Msa0818160:CDS 40.0%
CTGTATATATGGGAGAAGGA+TGG + chr5_3:53711589-53711608 Msa0818160:CDS 40.0%
ACTCTTGCATAGAAATCTGG+AGG - chr5_3:53711654-53711673 None:intergenic 40.0%
! AAGCTATTCTGGAGAGCTTA+TGG - chr5_3:53711716-53711735 None:intergenic 40.0%
! TAAATACAGGTTGGGATTGC+TGG + chr5_3:53711775-53711794 Msa0818160:intron 40.0%
TCAAATACCTCGTTCCATGT+AGG - chr5_3:53711856-53711875 None:intergenic 40.0%
CGTGAACTTCTATACGAAGA+AGG - chr5_3:53711906-53711925 None:intergenic 40.0%
! TCCGAGAAAGATGATTTTGG+TGG + chr5_3:53711937-53711956 Msa0818160:CDS 40.0%
GCCACCAAAATCATCTTTCT+CGG - chr5_3:53711941-53711960 None:intergenic 40.0%
CCAAACATGCTTACCTGTTT+CGG + chr5_3:53711960-53711979 Msa0818160:CDS 40.0%
ATGACGTGGCAACACATTAT+TGG + chr5_3:53712473-53712492 Msa0818160:intron 40.0%
AACCTAACCTGGAGAACTAA+TGG + chr5_3:53712757-53712776 Msa0818160:intron 40.0%
! CTTATCTCCATTAGTTCTCC+AGG - chr5_3:53712767-53712786 None:intergenic 40.0%
ACACTGTTTGGAAGAGCTTA+TGG - chr5_3:53712829-53712848 None:intergenic 40.0%
GGAGACATACTATTTGTACC+TGG + chr5_3:53712958-53712977 Msa0818160:CDS 40.0%
! TTTGTCTCAAGGTACTCCTT+AGG - chr5_3:53709674-53709693 None:intergenic 40.0%
AAAGAGGATGATTCACTGCA+CGG + chr5_3:53709707-53709726 Msa0818160:CDS 40.0%
ACAAACCTAACTTGAAGCTC+GGG - chr5_3:53709772-53709791 None:intergenic 40.0%
CCAAACTGTTTCCCTAAAGA+TGG - chr5_3:53709883-53709902 None:intergenic 40.0%
! CCATCTTTAGGGAAACAGTT+TGG + chr5_3:53709880-53709899 Msa0818160:intron 40.0%
!! CTTTATATTCTGGAGCTACG+TGG - chr5_3:53709961-53709980 None:intergenic 40.0%
CACGTAGCTCCAGAATATAA+AGG + chr5_3:53709959-53709978 Msa0818160:CDS 40.0%
GGTTTAATTGCCATTCATGC+TGG + chr5_3:53709980-53709999 Msa0818160:CDS 40.0%
AAATAGATCCGGAGAAAGTG+AGG + chr5_3:53710035-53710054 Msa0818160:CDS 40.0%
GAAAAGGCTGCTATAACTCA+TGG + chr5_3:53710085-53710104 Msa0818160:CDS 40.0%
CTTAAAACGCCAATTAACGG+AGG - chr5_3:53710233-53710252 None:intergenic 40.0%
! CTCCGTTAATTGGCGTTTTA+AGG + chr5_3:53710231-53710250 Msa0818160:intron 40.0%
!! ATTCTGAGGGTGTTTCCAAA+AGG + chr5_3:53710683-53710702 Msa0818160:CDS 40.0%
CCATGAATCCACCCAATTAA+GGG - chr5_3:53710737-53710756 None:intergenic 40.0%
TCCATGAATCCACCCAATTA+AGG - chr5_3:53710738-53710757 None:intergenic 40.0%
AATGGTTGCATTCAACATGC+AGG + chr5_3:53710763-53710782 Msa0818160:CDS 40.0%
GCAGTCATATATGTCACTGT+TGG + chr5_3:53711011-53711030 Msa0818160:intron 40.0%
TATATGTCACTGTTGGACAC+TGG + chr5_3:53711018-53711037 Msa0818160:intron 40.0%
! CAACTTTGATCTAAAGCGTC+AGG + chr5_3:53714413-53714432 Msa0818160:intron 40.0%
AAATCCTGCTCAAAAAGGAC+CGG - chr5_3:53711125-53711144 None:intergenic 40.0%
GGTTAAGTTAACACTGGTAG+AGG + chr5_3:53714582-53714601 Msa0818160:intron 40.0%
ATTGTGCTTGGTTCCATTGT+AGG + chr5_3:53711312-53711331 Msa0818160:intron 40.0%
TTGTGCTTGGTTCCATTGTA+GGG + chr5_3:53711313-53711332 Msa0818160:intron 40.0%
! CATGGAATGTTTAGAGCCAA+TGG + chr5_3:53711361-53711380 Msa0818160:CDS 40.0%
! GAATGTTTAGAGCCAATGGA+GGG + chr5_3:53711365-53711384 Msa0818160:CDS 40.0%
CCAGTCGTTAAGAGAAAATC+TGG - chr5_3:53711409-53711428 None:intergenic 40.0%
! CCAGATTTTCTCTTAACGAC+TGG + chr5_3:53711406-53711425 Msa0818160:CDS 40.0%
!! TTTTCTCTTAACGACTGGTC+CGG + chr5_3:53711411-53711430 Msa0818160:CDS 40.0%
GGATCAAAGACCTCATTATC+CGG - chr5_3:53711433-53711452 None:intergenic 40.0%
ACCTGTGAAGACTACTTTGA+AGG + chr5_3:53711465-53711484 Msa0818160:CDS 40.0%
ACCTTCAAAGTAGTCTTCAC+AGG - chr5_3:53711469-53711488 None:intergenic 40.0%
GTGACTGTATATATGGGAGA+AGG + chr5_3:53711585-53711604 Msa0818160:CDS 40.0%
CTGTATATATGGGAGAAGGA+TGG + chr5_3:53711589-53711608 Msa0818160:CDS 40.0%
ACTCTTGCATAGAAATCTGG+AGG - chr5_3:53711654-53711673 None:intergenic 40.0%
! AAGCTATTCTGGAGAGCTTA+TGG - chr5_3:53711716-53711735 None:intergenic 40.0%
! TAAATACAGGTTGGGATTGC+TGG + chr5_3:53711775-53711794 Msa0818160:intron 40.0%
TCAAATACCTCGTTCCATGT+AGG - chr5_3:53711856-53711875 None:intergenic 40.0%
CGTGAACTTCTATACGAAGA+AGG - chr5_3:53711906-53711925 None:intergenic 40.0%
! TCCGAGAAAGATGATTTTGG+TGG + chr5_3:53711937-53711956 Msa0818160:CDS 40.0%
GCCACCAAAATCATCTTTCT+CGG - chr5_3:53711941-53711960 None:intergenic 40.0%
CCAAACATGCTTACCTGTTT+CGG + chr5_3:53711960-53711979 Msa0818160:CDS 40.0%
AAGAGGGTCTTGATCTCTTG+TGG - chr5_3:53706745-53706764 None:intergenic 45.0%
!! CATTTTCATAGAAGGGGTGC+TGG + chr5_3:53706886-53706905 Msa0818160:CDS 45.0%
! TGTAAAGTACACGGCATTGG+AGG + chr5_3:53707998-53708017 Msa0818160:intron 45.0%
! GTAAAGTACACGGCATTGGA+GGG + chr5_3:53707999-53708018 Msa0818160:intron 45.0%
!!! GCTGTATCCGCTGCATTTTT+TGG + chr5_3:53708176-53708195 Msa0818160:intron 45.0%
TACACCATATGGCATCGCAT+TGG + chr5_3:53708259-53708278 Msa0818160:intron 45.0%
AAAGCCAATGCGATGCCATA+TGG - chr5_3:53708266-53708285 None:intergenic 45.0%
CTTATGGCCTAATGCATCCA+AGG + chr5_3:53708696-53708715 Msa0818160:CDS 45.0%
! TAGGACATTGACTACTCCTG+TGG + chr5_3:53709069-53709088 Msa0818160:intron 45.0%
AAGCATCTAATGAGCTCCAC+AGG - chr5_3:53709088-53709107 None:intergenic 45.0%
TGGAGCTCATTAGATGCTTG+AGG + chr5_3:53709089-53709108 Msa0818160:CDS 45.0%
CGGAAATTCTGATGCGACAA+AGG - chr5_3:53709131-53709150 None:intergenic 45.0%
CTGGAGTAAGATGGTCTTCT+AGG - chr5_3:53709165-53709184 None:intergenic 45.0%
TCCAGATCTTCAAGCCAAAG+TGG + chr5_3:53709180-53709199 Msa0818160:CDS 45.0%
CTCCATTCGTTCTCAAGGAT+AGG - chr5_3:53709382-53709401 None:intergenic 45.0%
!! GTCTGTCCATAAGCCGATTT+TGG - chr5_3:53709410-53709429 None:intergenic 45.0%
! AAGGTACTCCTTAGGTGGTT+TGG - chr5_3:53709666-53709685 None:intergenic 45.0%
TTTCGACTTCCCAGCATGAA+TGG - chr5_3:53709993-53710012 None:intergenic 45.0%
ATTCATGCTGGGAAGTCGAA+AGG + chr5_3:53709992-53710011 Msa0818160:CDS 45.0%
CGCATGGCTCAAAATAGATC+CGG + chr5_3:53710024-53710043 Msa0818160:CDS 45.0%
CTTATACGCCTCACTTTCTC+CGG - chr5_3:53710046-53710065 None:intergenic 45.0%
CTATCTCTGACTCTATCCCA+TGG + chr5_3:53710181-53710200 Msa0818160:intron 45.0%
CCTATAGCAGACCAACAATC+AGG - chr5_3:53710648-53710667 None:intergenic 45.0%
! CCTGATTGTTGGTCTGCTAT+AGG + chr5_3:53710645-53710664 Msa0818160:intron 45.0%
! GAGTCAATGCGAGTACCTTT+TGG - chr5_3:53710701-53710720 None:intergenic 45.0%
! CCCTTAATTGGGTGGATTCA+TGG + chr5_3:53710734-53710753 Msa0818160:CDS 45.0%
GTGGATTCATGGAGCTCAAA+TGG + chr5_3:53710745-53710764 Msa0818160:CDS 45.0%
! ACTGGCTTAGACACCAGAAA+CGG + chr5_3:53710925-53710944 Msa0818160:intron 45.0%
! TCTAAAGCGTCAGGGTACAT+AGG + chr5_3:53711053-53711072 Msa0818160:intron 45.0%
TGTGCTTGGTTCCATTGTAG+GGG + chr5_3:53711314-53711333 Msa0818160:intron 45.0%
TTGGTTCCATTGTAGGGGTA+TGG + chr5_3:53711319-53711338 Msa0818160:intron 45.0%
! TGGTTCCATTGTAGGGGTAT+GGG + chr5_3:53711320-53711339 Msa0818160:intron 45.0%
AGATCACTTTGGCTGATGCA+TGG + chr5_3:53711343-53711362 Msa0818160:CDS 45.0%
! GGAATGTTTAGAGCCAATGG+AGG + chr5_3:53711364-53711383 Msa0818160:CDS 45.0%
AACATAACCACACCCTCCAT+TGG - chr5_3:53711380-53711399 None:intergenic 45.0%
CAAGGGCAATAGAGGATAAC+TGG + chr5_3:53711827-53711846 Msa0818160:CDS 45.0%
!! ATACGAAGAAGGGCTAGTTC+CGG - chr5_3:53711895-53711914 None:intergenic 45.0%
CCGAAACAGGTAAGCATGTT+TGG - chr5_3:53711963-53711982 None:intergenic 45.0%
! CTCCATTAGTTCTCCAGGTT+AGG - chr5_3:53712762-53712781 None:intergenic 45.0%
! AAGGTACTCCTTAGGTGGTT+TGG - chr5_3:53709666-53709685 None:intergenic 45.0%
TTTCGACTTCCCAGCATGAA+TGG - chr5_3:53709993-53710012 None:intergenic 45.0%
ATTCATGCTGGGAAGTCGAA+AGG + chr5_3:53709992-53710011 Msa0818160:CDS 45.0%
CGCATGGCTCAAAATAGATC+CGG + chr5_3:53710024-53710043 Msa0818160:CDS 45.0%
CTTATACGCCTCACTTTCTC+CGG - chr5_3:53710046-53710065 None:intergenic 45.0%
CTATCTCTGACTCTATCCCA+TGG + chr5_3:53710181-53710200 Msa0818160:intron 45.0%
CCTATAGCAGACCAACAATC+AGG - chr5_3:53710648-53710667 None:intergenic 45.0%
! CCTGATTGTTGGTCTGCTAT+AGG + chr5_3:53710645-53710664 Msa0818160:intron 45.0%
! GAGTCAATGCGAGTACCTTT+TGG - chr5_3:53710701-53710720 None:intergenic 45.0%
! CCCTTAATTGGGTGGATTCA+TGG + chr5_3:53710734-53710753 Msa0818160:CDS 45.0%
GTGGATTCATGGAGCTCAAA+TGG + chr5_3:53710745-53710764 Msa0818160:CDS 45.0%
!! CTATGTGTCTGTGTCGTTTC+TGG - chr5_3:53714322-53714341 None:intergenic 45.0%
TTCACGCAAGTTACGATGTG+AGG + chr5_3:53714561-53714580 Msa0818160:intron 45.0%
TGTGCTTGGTTCCATTGTAG+GGG + chr5_3:53711314-53711333 Msa0818160:intron 45.0%
TTGGTTCCATTGTAGGGGTA+TGG + chr5_3:53711319-53711338 Msa0818160:intron 45.0%
! TGGTTCCATTGTAGGGGTAT+GGG + chr5_3:53711320-53711339 Msa0818160:intron 45.0%
AGATCACTTTGGCTGATGCA+TGG + chr5_3:53711343-53711362 Msa0818160:CDS 45.0%
! GGAATGTTTAGAGCCAATGG+AGG + chr5_3:53711364-53711383 Msa0818160:CDS 45.0%
AACATAACCACACCCTCCAT+TGG - chr5_3:53711380-53711399 None:intergenic 45.0%
CAAGGGCAATAGAGGATAAC+TGG + chr5_3:53711827-53711846 Msa0818160:CDS 45.0%
!! ATACGAAGAAGGGCTAGTTC+CGG - chr5_3:53711895-53711914 None:intergenic 45.0%
CCGAAACAGGTAAGCATGTT+TGG - chr5_3:53711963-53711982 None:intergenic 45.0%
AGTTTCTCTGCATAGCCAGA+AGG + chr5_3:53715377-53715396 Msa0818160:CDS 45.0%
GTTTCTCTGCATAGCCAGAA+GGG + chr5_3:53715378-53715397 Msa0818160:CDS 45.0%
!!! TTTTTTTGTTTTTTATTTTA+TGG + chr5_3:53707943-53707962 Msa0818160:intron 5.0%
GTTGTTGCTGGCAGTGATGA+TGG - chr5_3:53706538-53706557 None:intergenic 50.0%
ATGTCATGTCATGGTGCACC+TGG - chr5_3:53708546-53708565 None:intergenic 50.0%
! CAGCTGATTCCCGGTTAGAT+AGG - chr5_3:53708608-53708627 None:intergenic 50.0%
CTCTGCAACGCTTTCACGAT+TGG - chr5_3:53708652-53708671 None:intergenic 50.0%
!! ATCGTGAAAGCGTTGCAGAG+AGG + chr5_3:53708652-53708671 Msa0818160:CDS 50.0%
! AAGCGTTGCAGAGAGGTGTA+AGG + chr5_3:53708659-53708678 Msa0818160:CDS 50.0%
! AGCGTTGCAGAGAGGTGTAA+GGG + chr5_3:53708660-53708679 Msa0818160:CDS 50.0%
!! GCCACTTTGGCTTGAAGATC+TGG - chr5_3:53709184-53709203 None:intergenic 50.0%
TCTTCAAGCCAAAGTGGCTG+AGG + chr5_3:53709186-53709205 Msa0818160:CDS 50.0%
ACCTGGCTCAGAAAGCTTGA+AGG + chr5_3:53709595-53709614 Msa0818160:CDS 50.0%
TCCTTCAAGCTTTCTGAGCC+AGG - chr5_3:53709599-53709618 None:intergenic 50.0%
! GTCTCAAGGTACTCCTTAGG+TGG - chr5_3:53709671-53709690 None:intergenic 50.0%
GGATGATTCACTGCACGGAA+AGG + chr5_3:53709712-53709731 Msa0818160:CDS 50.0%
! GAGATCCCGAGCTTCAAGTT+AGG + chr5_3:53709764-53709783 Msa0818160:CDS 50.0%
CGAAAGGAGGAATAGACGCA+TGG + chr5_3:53710008-53710027 Msa0818160:CDS 50.0%
CCTGCTCTCGTAGAGAAGAA+GGG - chr5_3:53710827-53710846 None:intergenic 50.0%
TCCTGCTCTCGTAGAGAAGA+AGG - chr5_3:53710828-53710847 None:intergenic 50.0%
TTCTTCTCTACGAGAGCAGG+AGG + chr5_3:53710827-53710846 Msa0818160:intron 50.0%
! GTCAGCACTTGGTAGCTTGA+AGG - chr5_3:53710869-53710888 None:intergenic 50.0%
!! TGAGCCAGTCCTTTTTGAGC+AGG + chr5_3:53711118-53711137 Msa0818160:intron 50.0%
GATCTCCCATACCCCTACAA+TGG - chr5_3:53711328-53711347 None:intergenic 50.0%
! AGGGGTATGGGAGATCACTT+TGG + chr5_3:53711332-53711351 Msa0818160:intron 50.0%
! TTTAGAGCCAATGGAGGGTG+TGG + chr5_3:53711370-53711389 Msa0818160:CDS 50.0%
! AACGACTGGTCCGGATAATG+AGG + chr5_3:53711420-53711439 Msa0818160:CDS 50.0%
AGGATAACTGGCTGCCTACA+TGG + chr5_3:53711839-53711858 Msa0818160:CDS 50.0%
TGAGTTCCCGCTTACTGTTC+CGG + chr5_3:53711873-53711892 Msa0818160:CDS 50.0%
CTAGTTCCGGAACAGTAAGC+GGG - chr5_3:53711882-53711901 None:intergenic 50.0%
GCTAGTTCCGGAACAGTAAG+CGG - chr5_3:53711883-53711902 None:intergenic 50.0%
GCTTACCTGTTTCGGAGCTA+AGG + chr5_3:53711968-53711987 Msa0818160:CDS 50.0%
AGTTTCCCTGCATAGCCAGA+AGG + chr5_3:53712005-53712024 Msa0818160:CDS 50.0%
GTTTCCCTGCATAGCCAGAA+GGG + chr5_3:53712006-53712025 Msa0818160:CDS 50.0%
! ATCTCCCTTCTGGCTATGCA+GGG - chr5_3:53712013-53712032 None:intergenic 50.0%
! TATCTCCCTTCTGGCTATGC+AGG - chr5_3:53712014-53712033 None:intergenic 50.0%
ACCTGGCTCAGAAAGCTTGA+AGG + chr5_3:53709595-53709614 Msa0818160:CDS 50.0%
TCCTTCAAGCTTTCTGAGCC+AGG - chr5_3:53709599-53709618 None:intergenic 50.0%
! GTCTCAAGGTACTCCTTAGG+TGG - chr5_3:53709671-53709690 None:intergenic 50.0%
GGATGATTCACTGCACGGAA+AGG + chr5_3:53709712-53709731 Msa0818160:CDS 50.0%
! GAGATCCCGAGCTTCAAGTT+AGG + chr5_3:53709764-53709783 Msa0818160:CDS 50.0%
CGAAAGGAGGAATAGACGCA+TGG + chr5_3:53710008-53710027 Msa0818160:CDS 50.0%
CCTGCTCTCGTAGAGAAGAA+GGG - chr5_3:53710827-53710846 None:intergenic 50.0%
TCCTGCTCTCGTAGAGAAGA+AGG - chr5_3:53710828-53710847 None:intergenic 50.0%
TTCTTCTCTACGAGAGCAGG+AGG + chr5_3:53710827-53710846 Msa0818160:intron 50.0%
! GTCAGCACTTGGTAGCTTGA+AGG - chr5_3:53710869-53710888 None:intergenic 50.0%
GATCTCCCATACCCCTACAA+TGG - chr5_3:53711328-53711347 None:intergenic 50.0%
! AGGGGTATGGGAGATCACTT+TGG + chr5_3:53711332-53711351 Msa0818160:intron 50.0%
! TTTAGAGCCAATGGAGGGTG+TGG + chr5_3:53711370-53711389 Msa0818160:CDS 50.0%
! AACGACTGGTCCGGATAATG+AGG + chr5_3:53711420-53711439 Msa0818160:CDS 50.0%
AGGATAACTGGCTGCCTACA+TGG + chr5_3:53711839-53711858 Msa0818160:CDS 50.0%
TGAGTTCCCGCTTACTGTTC+CGG + chr5_3:53711873-53711892 Msa0818160:CDS 50.0%
CTAGTTCCGGAACAGTAAGC+GGG - chr5_3:53711882-53711901 None:intergenic 50.0%
GCTAGTTCCGGAACAGTAAG+CGG - chr5_3:53711883-53711902 None:intergenic 50.0%
GCTTACCTGTTTCGGAGCTA+AGG + chr5_3:53711968-53711987 Msa0818160:CDS 50.0%
TGTGGTCCACAGCCACATTG+TGG + chr5_3:53708096-53708115 Msa0818160:intron 55.0%
TTGTGGCCACAATGTGGCTG+TGG - chr5_3:53708105-53708124 None:intergenic 55.0%
! GTCACTGCTCAGCTGATTCC+CGG - chr5_3:53708617-53708636 None:intergenic 55.0%
TCACTGCACGGAAAGGCTTC+AGG + chr5_3:53709719-53709738 Msa0818160:CDS 55.0%
TTCAGGCGACGATGAAGCGT+GGG + chr5_3:53709736-53709755 Msa0818160:CDS 55.0%
CATGCTGGGAAGTCGAAAGG+AGG + chr5_3:53709995-53710014 Msa0818160:CDS 55.0%
CCCTTCTTCTCTACGAGAGC+AGG + chr5_3:53710824-53710843 Msa0818160:intron 55.0%
CCACTCCTTAGCTCCGAAAC+AGG - chr5_3:53711976-53711995 None:intergenic 55.0%
CCTGTTTCGGAGCTAAGGAG+TGG + chr5_3:53711973-53711992 Msa0818160:CDS 55.0%
TCACTGCACGGAAAGGCTTC+AGG + chr5_3:53709719-53709738 Msa0818160:CDS 55.0%
TTCAGGCGACGATGAAGCGT+GGG + chr5_3:53709736-53709755 Msa0818160:CDS 55.0%
CATGCTGGGAAGTCGAAAGG+AGG + chr5_3:53709995-53710014 Msa0818160:CDS 55.0%
CCCTTCTTCTCTACGAGAGC+AGG + chr5_3:53710824-53710843 Msa0818160:intron 55.0%
! CTAAAGCGTCAGGGCGACAT+AGG + chr5_3:53714423-53714442 Msa0818160:intron 55.0%
!! TGAGCCGGTCCTTTTTGAGC+AGG + chr5_3:53714488-53714507 Msa0818160:intron 55.0%
CCACTCCTTAGCTCCGAAAC+AGG - chr5_3:53711976-53711995 None:intergenic 55.0%
CCTGTTTCGGAGCTAAGGAG+TGG + chr5_3:53711973-53711992 Msa0818160:CDS 55.0%
CTTCAGGCGACGATGAAGCG+TGG + chr5_3:53709735-53709754 Msa0818160:CDS 60.0%
TCAGGCGACGATGAAGCGTG+GGG + chr5_3:53709737-53709756 Msa0818160:CDS 60.0%
CTGGCTGCCTACATGGAACG+AGG + chr5_3:53711846-53711865 Msa0818160:CDS 60.0%
CTTCAGGCGACGATGAAGCG+TGG + chr5_3:53709735-53709754 Msa0818160:CDS 60.0%
TCAGGCGACGATGAAGCGTG+GGG + chr5_3:53709737-53709756 Msa0818160:CDS 60.0%
CTGGCTGCCTACATGGAACG+AGG + chr5_3:53711846-53711865 Msa0818160:CDS 60.0%
CAGGCGACGATGAAGCGTGG+GGG + chr5_3:53709738-53709757 Msa0818160:CDS 65.0%
CGACGATGAAGCGTGGGGGA+CGG + chr5_3:53709742-53709761 Msa0818160:CDS 65.0%
CAGGCGACGATGAAGCGTGG+GGG + chr5_3:53709738-53709757 Msa0818160:CDS 65.0%
CGACGATGAAGCGTGGGGGA+CGG + chr5_3:53709742-53709761 Msa0818160:CDS 65.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 53706533 53715691 53706533 ID=Msa0818160;Name=Msa0818160
chr5_3 mRNA 53706533 53715691 53706533 ID=Msa0818160-mRNA-1;Parent=Msa0818160;Name=Msa0818160-mRNA-1;_AED=0.08;_eAED=0.08;_QI=140|0.5|0.6|1|1|1|15|242|959
chr5_3 exon 53706533 53706978 53706533 ID=Msa0818160-mRNA-1:exon:16225;Parent=Msa0818160-mRNA-1
chr5_3 exon 53708547 53708743 53708547 ID=Msa0818160-mRNA-1:exon:16226;Parent=Msa0818160-mRNA-1
chr5_3 exon 53709072 53709207 53709072 ID=Msa0818160-mRNA-1:exon:16227;Parent=Msa0818160-mRNA-1
chr5_3 exon 53709560 53709805 53709560 ID=Msa0818160-mRNA-1:exon:16228;Parent=Msa0818160-mRNA-1
chr5_3 exon 53709890 53710122 53709890 ID=Msa0818160-mRNA-1:exon:16229;Parent=Msa0818160-mRNA-1
chr5_3 exon 53710667 53710784 53710667 ID=Msa0818160-mRNA-1:exon:16230;Parent=Msa0818160-mRNA-1
chr5_3 exon 53711334 53711486 53711334 ID=Msa0818160-mRNA-1:exon:16231;Parent=Msa0818160-mRNA-1
chr5_3 exon 53711585 53711671 53711585 ID=Msa0818160-mRNA-1:exon:16232;Parent=Msa0818160-mRNA-1
chr5_3 exon 53711784 53712056 53711784 ID=Msa0818160-mRNA-1:exon:16233;Parent=Msa0818160-mRNA-1
chr5_3 exon 53712940 53713185 53712940 ID=Msa0818160-mRNA-1:exon:16234;Parent=Msa0818160-mRNA-1
chr5_3 exon 53713270 53713502 53713270 ID=Msa0818160-mRNA-1:exon:16235;Parent=Msa0818160-mRNA-1
chr5_3 exon 53714048 53714165 53714048 ID=Msa0818160-mRNA-1:exon:16236;Parent=Msa0818160-mRNA-1
chr5_3 exon 53714706 53714858 53714706 ID=Msa0818160-mRNA-1:exon:16237;Parent=Msa0818160-mRNA-1
chr5_3 exon 53714957 53715043 53714957 ID=Msa0818160-mRNA-1:exon:16238;Parent=Msa0818160-mRNA-1
chr5_3 exon 53715156 53715691 53715156 ID=Msa0818160-mRNA-1:exon:16239;Parent=Msa0818160-mRNA-1
chr5_3 five_prime_UTR 53706533 53706672 53706533 ID=Msa0818160-mRNA-1:five_prime_utr;Parent=Msa0818160-mRNA-1
chr5_3 CDS 53706673 53706978 53706673 ID=Msa0818160-mRNA-1:cds;Parent=Msa0818160-mRNA-1
chr5_3 CDS 53708547 53708743 53708547 ID=Msa0818160-mRNA-1:cds;Parent=Msa0818160-mRNA-1
chr5_3 CDS 53709072 53709207 53709072 ID=Msa0818160-mRNA-1:cds;Parent=Msa0818160-mRNA-1
chr5_3 CDS 53709560 53709805 53709560 ID=Msa0818160-mRNA-1:cds;Parent=Msa0818160-mRNA-1
chr5_3 CDS 53709890 53710122 53709890 ID=Msa0818160-mRNA-1:cds;Parent=Msa0818160-mRNA-1
chr5_3 CDS 53710667 53710784 53710667 ID=Msa0818160-mRNA-1:cds;Parent=Msa0818160-mRNA-1
chr5_3 CDS 53711334 53711486 53711334 ID=Msa0818160-mRNA-1:cds;Parent=Msa0818160-mRNA-1
chr5_3 CDS 53711585 53711671 53711585 ID=Msa0818160-mRNA-1:cds;Parent=Msa0818160-mRNA-1
chr5_3 CDS 53711784 53712056 53711784 ID=Msa0818160-mRNA-1:cds;Parent=Msa0818160-mRNA-1
chr5_3 CDS 53712940 53713185 53712940 ID=Msa0818160-mRNA-1:cds;Parent=Msa0818160-mRNA-1
chr5_3 CDS 53713270 53713502 53713270 ID=Msa0818160-mRNA-1:cds;Parent=Msa0818160-mRNA-1
chr5_3 CDS 53714048 53714165 53714048 ID=Msa0818160-mRNA-1:cds;Parent=Msa0818160-mRNA-1
chr5_3 CDS 53714706 53714858 53714706 ID=Msa0818160-mRNA-1:cds;Parent=Msa0818160-mRNA-1
chr5_3 CDS 53714957 53715043 53714957 ID=Msa0818160-mRNA-1:cds;Parent=Msa0818160-mRNA-1
chr5_3 CDS 53715156 53715449 53715156 ID=Msa0818160-mRNA-1:cds;Parent=Msa0818160-mRNA-1
chr5_3 three_prime_UTR 53715450 53715691 53715450 ID=Msa0818160-mRNA-1:three_prime_utr;Parent=Msa0818160-mRNA-1
Gene Sequence

>Msa0818160

ATGTCAAAACAAACATACAGTGTTTGTTTATGCTGGCGTAGAAGATTCAAGCTAGCTTTATCAGAAGCACCACAAGAGATCAAGACCCTCTTTGAACAATACTCAGAAAATGATCTCATGACACCTTCAAACCTCAAAAGATTCTTAATTGAAATTCAAAAACAAGAACAAGCTACTGAAGAAGAAGCACAAACTATCATTGATAGTTTCAAGCATTTTCATAGAAGGGGTGCTGGACTTAATCTTGAAACTTTTTTCAAGTATCTCTTTAGTGATAGTAACCTTGCTCTTTTACCTTCAATTGGGGTGCACCATGACATGACATTACCCTTGTCTCATTATTTCATATATACTGGTCACAATTCCTATCTAACCGGGAATCAGCTGAGCAGTGACTGCAGTGACATTCCAATCGTGAAAGCGTTGCAGAGAGGTGTAAGGGTAATTGAGTTGGACTTATGGCCTAATGCATCCAAGGATAATGTTGATGTTCTTCATGGAAGGACATTGACTACTCCTGTGGAGCTCATTAGATGCTTGAGGTCTATTAAGGAACATGCCTTTGTCGCATCAGAATTTCCGGTTGTAATAACCCTAGAAGACCATCTTACTCCAGATCTTCAAGCCAAAGTGGCTGAGATGGTTACTTCAACATTTGGAGACATACTATATGTACCTGGCTCAGAAAGCTTGAAGGAATTTCCTTCTCCTGAATCACTTAAAAAGAGGATTATTATATCAACCAAACCACCTAAGGAGTACCTTGAGACAAAAGAAGTAAAGGAAAAAGAGGATGATTCACTGCACGGAAAGGCTTCAGGCGACGATGAAGCGTGGGGGACGGAGATCCCGAGCTTCAAGTTAGGTTTGTTATCCGATTACAAGGGAAACAGTTTGGATAAAGAATATTTTCATGACGAGGAAGAGCTTTCTGAATCAGACAAGTCACATCACCACGTAGCTCCAGAATATAAAGGTTTAATTGCCATTCATGCTGGGAAGTCGAAAGGAGGAATAGACGCATGGCTCAAAATAGATCCGGAGAAAGTGAGGCGTATAAGTTTAAGTGAGCAACAACTTGAAAAGGCTGCTATAACTCATGGAAAAGAAATTGTCAGGTTTACTCAGAAGAATATTCTGAGGGTGTTTCCAAAAGGTACTCGCATTGACTCGTCAAATTATAATCCCTTAATTGGGTGGATTCATGGAGCTCAAATGGTTGCATTCAACATGCAGGGGTATGGGAGATCACTTTGGCTGATGCATGGAATGTTTAGAGCCAATGGAGGGTGTGGTTATGTTAAAAAACCAGATTTTCTCTTAACGACTGGTCCGGATAATGAGGTCTTTGATCCTAAAGCTAAGTTACCTGTGAAGACTACTTTGAAGGTGACTGTATATATGGGAGAAGGATGGTATTATGATTTCAAACATACACACTTTGATCAATATTCACCTCCAGATTTCTATGCAAGAGTTGGGATTGCTGGAGTCCCTAGTGATAGTATAATGAAAAAAACAAGGGCAATAGAGGATAACTGGCTGCCTACATGGAACGAGGTATTTGAGTTCCCGCTTACTGTTCCGGAACTAGCCCTTCTTCGTATAGAAGTTCACGAGTATGACATGTCCGAGAAAGATGATTTTGGTGGCCAAACATGCTTACCTGTTTCGGAGCTAAGGAGTGGCGTTCGAGCAGTTTCCCTGCATAGCCAGAAGGGAGATAAATACAACTCTGTAAAGCTTCTTATGGTTACTTCAACATTTGGAGACATACTATTTGTACCTGGCTCAGAAAGCTTGAAGGAATTTCCTTCTCCTGAATCACTTAAAAAGAGGATTATTATATCAACCAAACCACCTAAGGAGTACCTTGAGACAAAAGAAGTAAAGGAAAAAGAGGATGATTCACTGCACGGAAAGGCTTCAGGCGACGATGAAGCGTGGGGGACGGAGATCCCGAGCTTCAAGTTAGGTTTGTTATCCGATTACAAGGGAAACAGTTTGGATAAAGAATATTTTCATGACGAGGAAGAGCTTTCTGAATCAGACAAGTCACATCACCACGTAGCTCCAGAATATAAAGGTTTAATTGCCATTCATGCTGGGAAGTCGAAAGGAGGAATAGACGCATGGCTCAAAATAGATCCGGAGAAAGTGAGGCGTATAAGTTTAAGTGAGCAACAACTTGAAAAGGCTGCTATAACTCATGGAAAAGAAATTGTCAGGTTTACTCAGAAGAATATTCTGAGGGTGTTTCCAAAAGGTACTCGCATTGACTCGTCAAATTATAATCCCTTAATTGGGTGGATTCATGGAGCTCAAATGGTTGCATTCAACATGCAGGGGTATGGGAGATCACTTTGGCTGATGCATGGAATGTTTAGAGCCAATGGAGGGTGTGGTTATGTTAAAAAACCAGATTTTCTCTTAACGACTGGTCCGGATAATGAGGTCTTTGATCCTAAAGCTAAGTTACCTGTGAAGACTACTTTGAAGGTGACTGTATATATGGGAGAAGGATGGTATTATGATTTCAAACATACACACTTTGATCAATATTCACCTCCAGATTTCTATGCAAGAGTTGGGATTGCTGGAGTCCCTAGTGATAGTATAATGAAAAAAACAAGGGCAATAGAGGATAACTGGCTGCCTACATGGAACGAGGTATTTGAGTTCCCGCTTACTGTTCCGGAACTAGCCCTTCTTCGTATAGAAGTTCACGAGTATGACATGTCCGAGAAAGATGATTTTGGTGGCCAAACATGCTTACCTGTTTCGGAGCTAAGGAGTGGCGTTCGAGCAGTTTCTCTGCATAGCCAGAAGGGAGATAAATACAACTCTGTAAAGCTTCTTATGCGCTTTGAATTTCATTGA
Protein sequence

>Msa0818160

MSKQTYSVCLCWRRRFKLALSEAPQEIKTLFEQYSENDLMTPSNLKRFLIEIQKQEQATEEEAQTIIDSFKHFHRRGAGLNLETFFKYLFSDSNLALLPSIGVHHDMTLPLSHYFIYTGHNSYLTGNQLSSDCSDIPIVKALQRGVRVIELDLWPNASKDNVDVLHGRTLTTPVELIRCLRSIKEHAFVASEFPVVITLEDHLTPDLQAKVAEMVTSTFGDILYVPGSESLKEFPSPESLKKRIIISTKPPKEYLETKEVKEKEDDSLHGKASGDDEAWGTEIPSFKLGLLSDYKGNSLDKEYFHDEEELSESDKSHHHVAPEYKGLIAIHAGKSKGGIDAWLKIDPEKVRRISLSEQQLEKAAITHGKEIVRFTQKNILRVFPKGTRIDSSNYNPLIGWIHGAQMVAFNMQGYGRSLWLMHGMFRANGGCGYVKKPDFLLTTGPDNEVFDPKAKLPVKTTLKVTVYMGEGWYYDFKHTHFDQYSPPDFYARVGIAGVPSDSIMKKTRAIEDNWLPTWNEVFEFPLTVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELRSGVRAVSLHSQKGDKYNSVKLLMVTSTFGDILFVPGSESLKEFPSPESLKKRIIISTKPPKEYLETKEVKEKEDDSLHGKASGDDEAWGTEIPSFKLGLLSDYKGNSLDKEYFHDEEELSESDKSHHHVAPEYKGLIAIHAGKSKGGIDAWLKIDPEKVRRISLSEQQLEKAAITHGKEIVRFTQKNILRVFPKGTRIDSSNYNPLIGWIHGAQMVAFNMQGYGRSLWLMHGMFRANGGCGYVKKPDFLLTTGPDNEVFDPKAKLPVKTTLKVTVYMGEGWYYDFKHTHFDQYSPPDFYARVGIAGVPSDSIMKKTRAIEDNWLPTWNEVFEFPLTVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELRSGVRAVSLHSQKGDKYNSVKLLMRFEFH*