Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0478840 | XP_013462132.1 | 96.452 | 310 | 11 | 0 | 1 | 310 | 1 | 310 | 0.0 | 600 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0478840 | sp|Q9FUW6|BETV6_BETPN | 80.968 | 310 | 57 | 1 | 1 | 310 | 1 | 308 | 0.0 | 512 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0478840 | I3SC37 | 96.452 | 310 | 11 | 0 | 1 | 310 | 1 | 310 | 0.0 | 600 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0013050 | Msa0478840 | 0.800595 | 1.338704e-48 | -8.615850e-47 |
| Msa0044540 | Msa0478840 | 0.839111 | 1.926740e-57 | -8.615850e-47 |
| Msa0091250 | Msa0478840 | 0.810865 | 9.320268e-51 | -8.615850e-47 |
| Msa0177700 | Msa0478840 | 0.800210 | 1.603903e-48 | -8.615850e-47 |
| Msa0210410 | Msa0478840 | 0.820881 | 5.425229e-53 | -8.615850e-47 |
| Msa0223410 | Msa0478840 | 0.801835 | 7.466248e-49 | -8.615850e-47 |
| Msa0384190 | Msa0478840 | 0.931648 | 2.767326e-94 | -8.615850e-47 |
| Msa0394410 | Msa0478840 | 0.804763 | 1.848117e-49 | -8.615850e-47 |
| Msa0434900 | Msa0478840 | 0.956608 | 1.974142e-114 | -8.615850e-47 |
| Msa0478840 | Msa0479130 | 0.820512 | 6.595059e-53 | -8.615850e-47 |
| Msa0478840 | Msa0579290 | -0.807318 | 5.360811e-50 | -8.615850e-47 |
| Msa0478840 | Msa0579390 | -0.817040 | 4.051669e-52 | -8.615850e-47 |
| Msa0478840 | Msa0589390 | -0.802926 | 4.448131e-49 | -8.615850e-47 |
| Msa0478840 | Msa0600410 | 0.813330 | 2.703891e-51 | -8.615850e-47 |
| Msa0478840 | Msa0709800 | 0.948914 | 3.654864e-107 | -8.615850e-47 |
| Msa0478840 | Msa0770360 | -0.801362 | 9.331543e-49 | -8.615850e-47 |
| Msa0478840 | Msa0865890 | -0.803653 | 3.145598e-49 | -8.615850e-47 |
| Msa0478840 | Msa0970420 | -0.804989 | 1.657499e-49 | -8.615850e-47 |
| Msa0478840 | Msa1207470 | 0.809143 | 2.188695e-50 | -8.615850e-47 |
| Msa0478840 | Msa1214480 | -0.807017 | 6.207144e-50 | -8.615850e-47 |
| Msa0272480 | Msa0478840 | 0.808434 | 3.103041e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0478840 | MtrunA17_Chr3g0141681 | 96.452 | 310 | 11 | 0 | 1 | 310 | 1 | 310 | 0.0 | 600 |
| Msa0478840 | MtrunA17_Chr3g0141691 | 76.452 | 310 | 71 | 1 | 1 | 310 | 1 | 308 | 3.27e-174 | 484 |
| Msa0478840 | MtrunA17_Chr3g0144701 | 72.876 | 306 | 81 | 1 | 5 | 310 | 9 | 312 | 5.97e-168 | 468 |
| Msa0478840 | MtrunA17_Chr5g0404471 | 70.227 | 309 | 90 | 1 | 2 | 310 | 3 | 309 | 6.70e-158 | 443 |
| Msa0478840 | MtrunA17_Chr4g0035131 | 61.765 | 306 | 115 | 1 | 3 | 308 | 43 | 346 | 4.66e-138 | 395 |
| Msa0478840 | MtrunA17_Chr4g0035111 | 57.792 | 308 | 128 | 1 | 1 | 308 | 3 | 308 | 2.37e-131 | 376 |
| Msa0478840 | MtrunA17_Chr5g0404511 | 57.321 | 321 | 123 | 4 | 1 | 310 | 1 | 318 | 5.04e-124 | 357 |
| Msa0478840 | MtrunA17_Chr5g0404481 | 57.009 | 321 | 124 | 4 | 1 | 310 | 1 | 318 | 1.53e-123 | 356 |
| Msa0478840 | MtrunA17_Chr4g0035121 | 49.355 | 310 | 153 | 2 | 3 | 310 | 2 | 309 | 1.11e-104 | 308 |
| Msa0478840 | MtrunA17_Chr5g0409651 | 46.645 | 313 | 155 | 5 | 4 | 309 | 3 | 310 | 1.82e-93 | 280 |
| Msa0478840 | MtrunA17_Chr8g0369391 | 46.178 | 314 | 160 | 4 | 3 | 310 | 2 | 312 | 1.10e-92 | 278 |
| Msa0478840 | MtrunA17_Chr5g0409641 | 46.452 | 310 | 154 | 5 | 4 | 306 | 3 | 307 | 8.33e-91 | 273 |
| Msa0478840 | MtrunA17_Chr3g0078901 | 44.695 | 311 | 162 | 5 | 2 | 310 | 3 | 305 | 1.84e-89 | 270 |
| Msa0478840 | MtrunA17_Chr3g0078831 | 44.194 | 310 | 165 | 4 | 2 | 310 | 3 | 305 | 2.76e-86 | 261 |
| Msa0478840 | MtrunA17_Chr1g0198771 | 39.482 | 309 | 182 | 3 | 4 | 310 | 13 | 318 | 2.13e-75 | 234 |
| Msa0478840 | MtrunA17_Chr3g0078941 | 43.961 | 207 | 109 | 3 | 104 | 310 | 12 | 211 | 6.18e-54 | 175 |
| Msa0478840 | MtrunA17_Chr3g0078951 | 48.113 | 106 | 51 | 3 | 2 | 106 | 3 | 105 | 1.69e-21 | 87.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0478840 | AT4G39230.1 | 71.935 | 310 | 85 | 1 | 1 | 310 | 1 | 308 | 1.52e-166 | 465 |
| Msa0478840 | AT1G75280.1 | 71.661 | 307 | 86 | 1 | 3 | 309 | 4 | 309 | 2.79e-156 | 439 |
| Msa0478840 | AT1G75290.1 | 67.532 | 308 | 100 | 0 | 2 | 309 | 3 | 310 | 2.09e-152 | 430 |
| Msa0478840 | AT1G75290.2 | 67.532 | 308 | 100 | 0 | 2 | 309 | 30 | 337 | 9.78e-152 | 429 |
| Msa0478840 | AT1G75300.1 | 62.733 | 322 | 103 | 3 | 2 | 309 | 3 | 321 | 2.64e-140 | 399 |
| Msa0478840 | AT1G19540.1 | 60.714 | 308 | 119 | 1 | 5 | 310 | 3 | 310 | 2.72e-130 | 373 |
| Msa0478840 | AT1G19540.2 | 62.846 | 253 | 92 | 1 | 5 | 255 | 3 | 255 | 2.95e-106 | 310 |
| Msa0478840 | AT4G34540.1 | 48.052 | 308 | 153 | 2 | 3 | 310 | 6 | 306 | 7.45e-101 | 298 |
| Msa0478840 | AT4G13660.1 | 44.762 | 315 | 164 | 4 | 2 | 310 | 7 | 317 | 8.87e-84 | 255 |
| Msa0478840 | AT4G13660.2 | 44.762 | 315 | 164 | 4 | 2 | 310 | 7 | 317 | 8.87e-84 | 255 |
| Msa0478840 | AT1G32100.1 | 44.586 | 314 | 164 | 4 | 3 | 310 | 8 | 317 | 9.78e-84 | 255 |
Find 91 sgRNAs with CRISPR-Local
Find 194 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAATAGCACGTCGAATTT+TGG | 0.137471 | 3_3:-83668121 | None:intergenic |
| ACATTGAACAAATGGAATTT+AGG | 0.142995 | 3_3:+83669233 | Msa0478840:three_prime_UTR |
| TTGAATGAATAAATGTTCTT+TGG | 0.240740 | 3_3:-83668551 | None:intergenic |
| TTGTCAAAATGTTGCCTTCT+TGG | 0.255177 | 3_3:+83669084 | Msa0478840:three_prime_UTR |
| CTCAATAATTTCAAAACTTT+AGG | 0.256762 | 3_3:+83666708 | Msa0478840:CDS |
| GACAATTATCGCTGCAATTA+AGG | 0.274920 | 3_3:+83667043 | Msa0478840:CDS |
| TGAATGAATAAATGTTCTTT+GGG | 0.284153 | 3_3:-83668550 | None:intergenic |
| CATTGAACAAATGGAATTTA+GGG | 0.292864 | 3_3:+83669234 | Msa0478840:three_prime_UTR |
| CAAAACTTTAGGTGTCAATT+TGG | 0.297174 | 3_3:+83666719 | Msa0478840:CDS |
| TATATGACGACTTTGTCTTT+TGG | 0.336858 | 3_3:-83668240 | None:intergenic |
| ATATGAGTTGTTTGTTACTT+TGG | 0.343840 | 3_3:+83668950 | Msa0478840:three_prime_UTR |
| AAAGACAAAGTCGTCATATA+TGG | 0.346716 | 3_3:+83668243 | Msa0478840:CDS |
| TTTGTGATTGAGCCATCTTT+TGG | 0.365839 | 3_3:+83668821 | Msa0478840:CDS |
| ACAGTTGTGTACTTGACATC+TGG | 0.375136 | 3_3:-83668866 | None:intergenic |
| GCCTTGTGGGAGAAGAAGAT+TGG | 0.381870 | 3_3:+83668584 | Msa0478840:CDS |
| TGGATCATCCACAGCTCTAA+TGG | 0.384230 | 3_3:-83668495 | None:intergenic |
| ATCGAAAGTAATTAAGGAAC+AGG | 0.389535 | 3_3:+83666522 | Msa0478840:five_prime_UTR |
| GTGTCTAGCAACTACTTTGC+TGG | 0.392084 | 3_3:+83668168 | Msa0478840:CDS |
| GAATTGATCGAAAGTAATTA+AGG | 0.402098 | 3_3:+83666516 | Msa0478840:five_prime_UTR |
| ATCGATAATACCACGTTGAT+TGG | 0.408391 | 3_3:-83668761 | None:intergenic |
| GGAGGTGGGGCGAATTGTCC+TGG | 0.408477 | 3_3:-83668216 | None:intergenic |
| AGAATCTTATTCAATGTCCT+TGG | 0.431387 | 3_3:-83668515 | None:intergenic |
| CAGGGGAAACATTGAACAAA+TGG | 0.436351 | 3_3:+83669225 | Msa0478840:three_prime_UTR |
| CAACGAGCTTGTAGCCTTGT+GGG | 0.437114 | 3_3:+83668571 | Msa0478840:CDS |
| AAACTTCTCAAGGATATTCA+AGG | 0.440563 | 3_3:+83668641 | Msa0478840:CDS |
| TTTCATTTGCTATGTAAACT+TGG | 0.451614 | 3_3:+83669018 | Msa0478840:three_prime_UTR |
| TAAGGAGGCTGGTAACGTTA+AGG | 0.454571 | 3_3:+83667061 | Msa0478840:CDS |
| TTGAGGAGATTAGCCTTGGC+AGG | 0.461709 | 3_3:-83666690 | None:intergenic |
| AATACCACGTTGATTGGAAT+AGG | 0.469491 | 3_3:-83668755 | None:intergenic |
| TCCTTGAGAAGTTTATCCTC+TGG | 0.484267 | 3_3:-83668632 | None:intergenic |
| CTCCCCACATTAGCTCAGCC+AGG | 0.490923 | 3_3:+83668198 | Msa0478840:CDS |
| GATCAGCGAGGGTGGATTCA+CGG | 0.492277 | 3_3:-83666668 | None:intergenic |
| TGCTTAGTCAAACTATGAGC+AGG | 0.501678 | 3_3:+83669206 | Msa0478840:three_prime_UTR |
| TTGCCTATAATTAAGAGGGC+TGG | 0.507755 | 3_3:+83666448 | None:intergenic |
| TTCACGGACCAATGCAAAAG+TGG | 0.510674 | 3_3:-83666652 | None:intergenic |
| TACTTCAAACGAACTGATCA+AGG | 0.512935 | 3_3:-83668898 | None:intergenic |
| ATCGCTGCAATTAAGGAGGC+TGG | 0.516620 | 3_3:+83667050 | Msa0478840:CDS |
| GTAGAAGCAAGTGCAAAAGC+TGG | 0.517859 | 3_3:+83666624 | Msa0478840:CDS |
| GGTAGGCCACGCTCTGATTG+AGG | 0.518193 | 3_3:+83667013 | Msa0478840:CDS |
| ATTATTGAGGAGATTAGCCT+TGG | 0.522079 | 3_3:-83666694 | None:intergenic |
| TCCAGAGGATAAACTTCTCA+AGG | 0.522426 | 3_3:+83668631 | Msa0478840:CDS |
| CCTTGTGGGAGAAGAAGATT+GGG | 0.523149 | 3_3:+83668585 | Msa0478840:CDS |
| TAACACACGCGTTGCATCCA+TGG | 0.523365 | 3_3:+83666545 | Msa0478840:exon |
| CACCACTCGGTGTTTGTGAA+AGG | 0.525734 | 3_3:+83668785 | Msa0478840:CDS |
| TTGTCCTGGCTGAGCTAATG+TGG | 0.535528 | 3_3:-83668202 | None:intergenic |
| TGTCTAGCAACTACTTTGCT+GGG | 0.539689 | 3_3:+83668169 | Msa0478840:CDS |
| TAAGCCTCAACCCCAAAAGA+TGG | 0.540084 | 3_3:-83668833 | None:intergenic |
| CCCAATCTTCTTCTCCCACA+AGG | 0.547082 | 3_3:-83668585 | None:intergenic |
| CAGTTGTGTACTTGACATCT+GGG | 0.555264 | 3_3:-83668865 | None:intergenic |
| GTTGCTAGACACATATGTGT+AGG | 0.558044 | 3_3:-83668157 | None:intergenic |
| TCAACGAGCTTGTAGCCTTG+TGG | 0.567546 | 3_3:+83668570 | Msa0478840:CDS |
| GAATGAATAAATGTTCTTTG+GGG | 0.568027 | 3_3:-83668549 | None:intergenic |
| AATGAATAAATGTTCTTTGG+GGG | 0.568257 | 3_3:-83668548 | None:intergenic |
| TCTGTATGATCATGAGAACT+TGG | 0.570219 | 3_3:+83666953 | Msa0478840:CDS |
| AACATTCACCATTAGAGCTG+TGG | 0.581419 | 3_3:+83668487 | Msa0478840:CDS |
| GGTAGATGTGGTCATATCTA+CGG | 0.586142 | 3_3:+83666992 | Msa0478840:CDS |
| TGTCCTGGCTGAGCTAATGT+GGG | 0.586984 | 3_3:-83668201 | None:intergenic |
| TTGCTAGACACATATGTGTA+GGG | 0.589350 | 3_3:-83668156 | None:intergenic |
| AGCAATCAAGCAGGTAGATG+TGG | 0.591293 | 3_3:+83666980 | Msa0478840:CDS |
| GCTCATAGTTTGACTAAGCA+CGG | 0.593610 | 3_3:-83669203 | None:intergenic |
| CACCCTCGCTGATCCTGCCA+AGG | 0.595340 | 3_3:+83666677 | Msa0478840:CDS |
| GCTTAGTCAAACTATGAGCA+GGG | 0.598406 | 3_3:+83669207 | Msa0478840:three_prime_UTR |
| AAAGTCGTCATATATGGCGA+TGG | 0.599327 | 3_3:+83668249 | Msa0478840:CDS |
| GGTATTATCGATCCACCACT+CGG | 0.602530 | 3_3:+83668772 | Msa0478840:CDS |
| CGACGTGCTATTGAAGCGGA+AGG | 0.614282 | 3_3:+83668129 | Msa0478840:CDS |
| AAACTCAGATGACACCAAGA+AGG | 0.618173 | 3_3:-83669098 | None:intergenic |
| CTTGGTGAAAGCAATCAAGC+AGG | 0.620713 | 3_3:+83666971 | Msa0478840:CDS |
| TTAGAGCTGTGGATGATCCA+AGG | 0.628287 | 3_3:+83668498 | Msa0478840:CDS |
| ATTGAACAAATGGAATTTAG+GGG | 0.628382 | 3_3:+83669235 | Msa0478840:three_prime_UTR |
| AATTCGACGTGCTATTGAAG+CGG | 0.628628 | 3_3:+83668125 | Msa0478840:CDS |
| CTTTCACAAACACCGAGTGG+TGG | 0.628695 | 3_3:-83668784 | None:intergenic |
| TCACGGACCAATGCAAAAGT+GGG | 0.629925 | 3_3:-83666651 | None:intergenic |
| TTCAACAAGGAAGATGACAT+TGG | 0.630695 | 3_3:+83668464 | Msa0478840:CDS |
| CTTGGCAGGATCAGCGAGGG+TGG | 0.631457 | 3_3:-83666676 | None:intergenic |
| ACGTCATTCCCAAATTCCGA+AGG | 0.641793 | 3_3:-83668048 | None:intergenic |
| ATCGGAGGAACAGGTTACAT+CGG | 0.642196 | 3_3:+83666591 | Msa0478840:CDS |
| GATGTGGTCATATCTACGGT+AGG | 0.649142 | 3_3:+83666996 | Msa0478840:CDS |
| CTTGATCCTCAATCAGAGCG+TGG | 0.652635 | 3_3:-83667019 | None:intergenic |
| ATGTACAGCGGTGTTCAACA+AGG | 0.653602 | 3_3:+83668451 | Msa0478840:intron |
| TGACGTTGATCGTGTCCATG+CGG | 0.662937 | 3_3:+83668065 | Msa0478840:CDS |
| AGCCTTGGCAGGATCAGCGA+GGG | 0.665918 | 3_3:-83666679 | None:intergenic |
| AATTATCGCTGCAATTAAGG+AGG | 0.668758 | 3_3:+83667046 | Msa0478840:CDS |
| CTTAGTCAAACTATGAGCAG+GGG | 0.671198 | 3_3:+83669208 | Msa0478840:three_prime_UTR |
| CACCTTTCACAAACACCGAG+TGG | 0.683877 | 3_3:-83668787 | None:intergenic |
| TATGGCGATGGAAATCCCAA+AGG | 0.691099 | 3_3:+83668261 | Msa0478840:CDS |
| TGTTACTTTGGAGTTTGACG+CGG | 0.700227 | 3_3:+83668962 | Msa0478840:three_prime_UTR |
| AGATGTCAAGTACACAACTG+TGG | 0.707472 | 3_3:+83668868 | Msa0478840:CDS |
| TAGCCTTGGCAGGATCAGCG+AGG | 0.707487 | 3_3:-83666680 | None:intergenic |
| TGTCAAGTACACAACTGTGG+AGG | 0.712034 | 3_3:+83668871 | Msa0478840:CDS |
| GTCCTGGCTGAGCTAATGTG+GGG | 0.743725 | 3_3:-83668200 | None:intergenic |
| GGCTCCTATTCCAATCAACG+TGG | 0.763745 | 3_3:+83668751 | Msa0478840:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATAATATTAAGTTTGAAA+TGG | + | chr3_3:83666908-83666927 | Msa0478840:intron | 10.0% |
| !! | TCTATAATATAATATAATTC+TGG | + | chr3_3:83667099-83667118 | Msa0478840:intron | 10.0% |
| !!! | TGAATAGTTTTATTTTTTTA+AGG | + | chr3_3:83667744-83667763 | Msa0478840:intron | 10.0% |
| !!! | TAGTTTTTTTTTTTTTTTTG+AGG | + | chr3_3:83667780-83667799 | Msa0478840:intron | 10.0% |
| !!! | AGTTTTTTTTTTTTTTTTGA+GGG | + | chr3_3:83667781-83667800 | Msa0478840:intron | 10.0% |
| !! | AATCAAATTCATTAAAAAAG+TGG | - | chr3_3:83666771-83666790 | None:intergenic | 15.0% |
| !! | TGGATAAATATAAAATCAAA+TGG | + | chr3_3:83667557-83667576 | Msa0478840:intron | 15.0% |
| !! | AATATAATCAGAATATTAGT+TGG | - | chr3_3:83667839-83667858 | None:intergenic | 15.0% |
| !!! | TCTGATTATATTTTCAATAA+AGG | + | chr3_3:83667847-83667866 | Msa0478840:intron | 15.0% |
| !!! | TTTAATTTGAGAGTTTTTTA+GGG | - | chr3_3:83667970-83667989 | None:intergenic | 15.0% |
| !!! | ACCTTTTTTGAATATTATTT+GGG | - | chr3_3:83669056-83669075 | None:intergenic | 15.0% |
| !!! | AACCTTTTTTGAATATTATT+TGG | - | chr3_3:83669057-83669076 | None:intergenic | 15.0% |
| !!! | CTAAAGTTTTGAAATTATTG+AGG | - | chr3_3:83666710-83666729 | None:intergenic | 20.0% |
| !! | CTCAATAATTTCAAAACTTT+AGG | + | chr3_3:83666708-83666727 | Msa0478840:CDS | 20.0% |
| !! | AAATTCATTAAAAAAGTGGA+AGG | - | chr3_3:83666767-83666786 | None:intergenic | 20.0% |
| !! | AATGGTAATTAAATTATTGC+AGG | + | chr3_3:83666926-83666945 | Msa0478840:intron | 20.0% |
| !! | ATGGTAATTAAATTATTGCA+GGG | + | chr3_3:83666927-83666946 | Msa0478840:intron | 20.0% |
| !! | GAAATGTTAAAAAAGACAAA+GGG | - | chr3_3:83667352-83667371 | None:intergenic | 20.0% |
| !! | AGAAATGTTAAAAAAGACAA+AGG | - | chr3_3:83667353-83667372 | None:intergenic | 20.0% |
| !! | TTTAATACACATACAAACAA+AGG | - | chr3_3:83667433-83667452 | None:intergenic | 20.0% |
| !! | ATGCATATAGTAATTTGAAA+AGG | + | chr3_3:83667522-83667541 | Msa0478840:intron | 20.0% |
| !! | TGAAAAGGAATTTACATTTA+TGG | + | chr3_3:83667537-83667556 | Msa0478840:intron | 20.0% |
| !!! | GTTTAATTTGAGAGTTTTTT+AGG | - | chr3_3:83667971-83667990 | None:intergenic | 20.0% |
| !!! | TCATTTTCTTAAATCATTAC+CGG | - | chr3_3:83668308-83668327 | None:intergenic | 20.0% |
| !! | TGAATGAATAAATGTTCTTT+GGG | - | chr3_3:83668553-83668572 | None:intergenic | 20.0% |
| !! | TTGAATGAATAAATGTTCTT+TGG | - | chr3_3:83668554-83668573 | None:intergenic | 20.0% |
| !! | ACCCAAATAATATTCAAAAA+AGG | + | chr3_3:83669052-83669071 | Msa0478840:three_prime_UTR | 20.0% |
| ! | GAATTGATCGAAAGTAATTA+AGG | + | chr3_3:83666516-83666535 | Msa0478840:five_prime_UTR | 25.0% |
| !! | AAAAGCAAGATTTTGTTCAT+CGG | + | chr3_3:83666573-83666592 | Msa0478840:CDS | 25.0% |
| ! | TGGTAATTAAATTATTGCAG+GGG | + | chr3_3:83666928-83666947 | Msa0478840:intron | 25.0% |
| ! | CATTTGGATTATGACTAAAT+GGG | - | chr3_3:83667215-83667234 | None:intergenic | 25.0% |
| ! | TCATTTGGATTATGACTAAA+TGG | - | chr3_3:83667216-83667235 | None:intergenic | 25.0% |
| ! | GCGCATAAATATTTATCATT+TGG | - | chr3_3:83667231-83667250 | None:intergenic | 25.0% |
| ! | ACAAAGGGAGTTTATATATA+GGG | - | chr3_3:83667337-83667356 | None:intergenic | 25.0% |
| ! | TTACATATTTCAAGACAAGT+TGG | + | chr3_3:83667460-83667479 | Msa0478840:intron | 25.0% |
| ! | AGTATATGAAAATGTTTGCA+AGG | - | chr3_3:83667721-83667740 | None:intergenic | 25.0% |
| ! | AAAAATAGTTAGTACTACCA+CGG | + | chr3_3:83667809-83667828 | Msa0478840:intron | 25.0% |
| ! | TTTCAATAAAGGCAAACAAT+AGG | + | chr3_3:83667858-83667877 | Msa0478840:intron | 25.0% |
| ! | TATTTCTTGTATATGTACAG+CGG | + | chr3_3:83668439-83668458 | Msa0478840:intron | 25.0% |
| ! | AATGAATAAATGTTCTTTGG+GGG | - | chr3_3:83668551-83668570 | None:intergenic | 25.0% |
| ! | GAATGAATAAATGTTCTTTG+GGG | - | chr3_3:83668552-83668571 | None:intergenic | 25.0% |
| !! | ATATGAGTTGTTTGTTACTT+TGG | + | chr3_3:83668950-83668969 | Msa0478840:three_prime_UTR | 25.0% |
| !!! | TTTCATTTGCTATGTAAACT+TGG | + | chr3_3:83669018-83669037 | Msa0478840:three_prime_UTR | 25.0% |
| ! | ACATTGAACAAATGGAATTT+AGG | + | chr3_3:83669233-83669252 | Msa0478840:three_prime_UTR | 25.0% |
| ! | CATTGAACAAATGGAATTTA+GGG | + | chr3_3:83669234-83669253 | Msa0478840:three_prime_UTR | 25.0% |
| ! | ATTGAACAAATGGAATTTAG+GGG | + | chr3_3:83669235-83669254 | Msa0478840:three_prime_UTR | 25.0% |
| !! | GAAAAAACTCTAAAGCAGTT+TGG | + | chr3_3:83666486-83666505 | Msa0478840:five_prime_UTR | 30.0% |
| ATCGAAAGTAATTAAGGAAC+AGG | + | chr3_3:83666522-83666541 | Msa0478840:five_prime_UTR | 30.0% | |
| CAAAACTTTAGGTGTCAATT+TGG | + | chr3_3:83666719-83666738 | Msa0478840:CDS | 30.0% | |
| TTCATTAAAAAAGTGGAAGG+AGG | - | chr3_3:83666764-83666783 | None:intergenic | 30.0% | |
| ATATCGTGTTCGTATATCAT+TGG | + | chr3_3:83666884-83666903 | Msa0478840:intron | 30.0% | |
| GGTAATTAAATTATTGCAGG+GGG | + | chr3_3:83666929-83666948 | Msa0478840:intron | 30.0% | |
| AAACCAGAAAAAAGGGTAAA+AGG | - | chr3_3:83667149-83667168 | None:intergenic | 30.0% | |
| !!! | TTTTACCCTTTTTTCTGGTT+TGG | + | chr3_3:83667148-83667167 | Msa0478840:intron | 30.0% |
| GACAAAGGGAGTTTATATAT+AGG | - | chr3_3:83667338-83667357 | None:intergenic | 30.0% | |
| CATACAAACAAAGGACAATT+TGG | - | chr3_3:83667424-83667443 | None:intergenic | 30.0% | |
| !! | ACAAGTTGGTAGTATCAATT+AGG | + | chr3_3:83667474-83667493 | Msa0478840:intron | 30.0% |
| !! | CAAGTTGGTAGTATCAATTA+GGG | + | chr3_3:83667475-83667494 | Msa0478840:intron | 30.0% |
| !! | AAGTTGGTAGTATCAATTAG+GGG | + | chr3_3:83667476-83667495 | Msa0478840:intron | 30.0% |
| TCGTTTGAACACAAAGTTAA+AGG | - | chr3_3:83667933-83667952 | None:intergenic | 30.0% | |
| !!! | TTTGAGAGTTTTTTAGGGTT+CGG | - | chr3_3:83667965-83667984 | None:intergenic | 30.0% |
| !!! | AGATTTTTTCCTTCGGAATT+TGG | + | chr3_3:83668039-83668058 | Msa0478840:CDS | 30.0% |
| !!! | GATTTTTTCCTTCGGAATTT+GGG | + | chr3_3:83668040-83668059 | Msa0478840:CDS | 30.0% |
| ! | TATATGACGACTTTGTCTTT+TGG | - | chr3_3:83668243-83668262 | None:intergenic | 30.0% |
| AAAGACAAAGTCGTCATATA+TGG | + | chr3_3:83668243-83668262 | Msa0478840:CDS | 30.0% | |
| !! | CATGTTAGTTTGTTACCTTT+GGG | - | chr3_3:83668279-83668298 | None:intergenic | 30.0% |
| !! | ACATGTTAGTTTGTTACCTT+TGG | - | chr3_3:83668280-83668299 | None:intergenic | 30.0% |
| AAGGTAACAAACTAACATGT+TGG | + | chr3_3:83668280-83668299 | Msa0478840:intron | 30.0% | |
| AGAATCTTATTCAATGTCCT+TGG | - | chr3_3:83668518-83668537 | None:intergenic | 30.0% | |
| !!! | TGGAAGAAAAGTTTTTTCGA+CGG | - | chr3_3:83668615-83668634 | None:intergenic | 30.0% |
| AAACTTCTCAAGGATATTCA+AGG | + | chr3_3:83668641-83668660 | Msa0478840:CDS | 30.0% | |
| ! | TATATTCCCTTTTATTGCAG+AGG | + | chr3_3:83668730-83668749 | Msa0478840:intron | 30.0% |
| TGAAATAAGAAGCAACAAGT+AGG | - | chr3_3:83669003-83669022 | None:intergenic | 30.0% | |
| !! | ATTATTGAGGAGATTAGCCT+TGG | - | chr3_3:83666697-83666716 | None:intergenic | 35.0% |
| GGAGGAATATATTACGTACA+GGG | - | chr3_3:83666746-83666765 | None:intergenic | 35.0% | |
| AGGAGGAATATATTACGTAC+AGG | - | chr3_3:83666747-83666766 | None:intergenic | 35.0% | |
| ATATTTCCAGTTCCAGCTAA+AGG | - | chr3_3:83666854-83666873 | None:intergenic | 35.0% | |
| TCTGTATGATCATGAGAACT+TGG | + | chr3_3:83666953-83666972 | Msa0478840:CDS | 35.0% | |
| GACAATTATCGCTGCAATTA+AGG | + | chr3_3:83667043-83667062 | Msa0478840:CDS | 35.0% | |
| AATTATCGCTGCAATTAAGG+AGG | + | chr3_3:83667046-83667065 | Msa0478840:CDS | 35.0% | |
| AGAAGCCAAACCAGAAAAAA+GGG | - | chr3_3:83667156-83667175 | None:intergenic | 35.0% | |
| AAGAAGCCAAACCAGAAAAA+AGG | - | chr3_3:83667157-83667176 | None:intergenic | 35.0% | |
| AGTTTATATATAGGGACGGA+GGG | - | chr3_3:83667329-83667348 | None:intergenic | 35.0% | |
| AGGGAGTTTATATATAGGGA+CGG | - | chr3_3:83667333-83667352 | None:intergenic | 35.0% | |
| ! | TATCAATTAGGGGCATGTTT+AGG | + | chr3_3:83667486-83667505 | Msa0478840:intron | 35.0% |
| CTCTCAAATTAAACTCTTGC+TGG | + | chr3_3:83667977-83667996 | Msa0478840:intron | 35.0% | |
| CAAATTAAACTCTTGCTGGT+AGG | + | chr3_3:83667981-83668000 | Msa0478840:intron | 35.0% | |
| !! | GCTGGTAGGAATTTTAACAT+TGG | + | chr3_3:83667995-83668014 | Msa0478840:intron | 35.0% |
| ! | TTCAATAGCACGTCGAATTT+TGG | - | chr3_3:83668124-83668143 | None:intergenic | 35.0% |
| TTGCTAGACACATATGTGTA+GGG | - | chr3_3:83668159-83668178 | None:intergenic | 35.0% | |
| TTCAACAAGGAAGATGACAT+TGG | + | chr3_3:83668464-83668483 | Msa0478840:CDS | 35.0% | |
| ! | CGAAAAAACTTTTCTTCCAG+AGG | + | chr3_3:83668616-83668635 | Msa0478840:CDS | 35.0% |
| ! | AATACCACGTTGATTGGAAT+AGG | - | chr3_3:83668758-83668777 | None:intergenic | 35.0% |
| ATCGATAATACCACGTTGAT+TGG | - | chr3_3:83668764-83668783 | None:intergenic | 35.0% | |
| ! | TTTGTGATTGAGCCATCTTT+TGG | + | chr3_3:83668821-83668840 | Msa0478840:CDS | 35.0% |
| ! | TTGTGATTGAGCCATCTTTT+GGG | + | chr3_3:83668822-83668841 | Msa0478840:CDS | 35.0% |
| TACTTCAAACGAACTGATCA+AGG | - | chr3_3:83668901-83668920 | None:intergenic | 35.0% | |
| TTGTCAAAATGTTGCCTTCT+TGG | + | chr3_3:83669084-83669103 | Msa0478840:three_prime_UTR | 35.0% | |
| !! | AATCTTGCTTTTCTCAGCCA+TGG | - | chr3_3:83666565-83666584 | None:intergenic | 40.0% |
| ! | AGCAAGATTTTGTTCATCGG+AGG | + | chr3_3:83666576-83666595 | Msa0478840:CDS | 40.0% |
| ! | ATTTTGTTCATCGGAGGAAC+AGG | + | chr3_3:83666582-83666601 | Msa0478840:CDS | 40.0% |
| GGTAGATGTGGTCATATCTA+CGG | + | chr3_3:83666992-83667011 | Msa0478840:CDS | 40.0% | |
| ! | GTGCCTTTTACCCTTTTTTC+TGG | + | chr3_3:83667143-83667162 | Msa0478840:intron | 40.0% |
| GAGTTTATATATAGGGACGG+AGG | - | chr3_3:83667330-83667349 | None:intergenic | 40.0% | |
| AAAGTGGACAGTCACAATCA+TGG | + | chr3_3:83667657-83667676 | Msa0478840:intron | 40.0% | |
| TGTGTCAAAGTCCAAATTGC+CGG | - | chr3_3:83667695-83667714 | None:intergenic | 40.0% | |
| !!! | TCCGCAGAGATTTTTTCCTT+CGG | + | chr3_3:83668032-83668051 | Msa0478840:intron | 40.0% |
| TCCGAAGGAAAAAATCTCTG+CGG | - | chr3_3:83668036-83668055 | None:intergenic | 40.0% | |
| ! | GCTTCAAATGCAGATTTTGC+TGG | - | chr3_3:83668096-83668115 | None:intergenic | 40.0% |
| ! | AATTCGACGTGCTATTGAAG+CGG | + | chr3_3:83668125-83668144 | Msa0478840:CDS | 40.0% |
| GTTGCTAGACACATATGTGT+AGG | - | chr3_3:83668160-83668179 | None:intergenic | 40.0% | |
| TGTCTAGCAACTACTTTGCT+GGG | + | chr3_3:83668169-83668188 | Msa0478840:CDS | 40.0% | |
| ! | ATGACGACTTTGTCTTTTGG+AGG | - | chr3_3:83668240-83668259 | None:intergenic | 40.0% |
| AAAGTCGTCATATATGGCGA+TGG | + | chr3_3:83668249-83668268 | Msa0478840:CDS | 40.0% | |
| ACAAACTAACATGTTGGCAC+CGG | + | chr3_3:83668286-83668305 | Msa0478840:intron | 40.0% | |
| AACATTCACCATTAGAGCTG+TGG | + | chr3_3:83668487-83668506 | Msa0478840:CDS | 40.0% | |
| TCCAGAGGATAAACTTCTCA+AGG | + | chr3_3:83668631-83668650 | Msa0478840:CDS | 40.0% | |
| TCCTTGAGAAGTTTATCCTC+TGG | - | chr3_3:83668635-83668654 | None:intergenic | 40.0% | |
| TAGGAGCCTCTGCAATAAAA+GGG | - | chr3_3:83668739-83668758 | None:intergenic | 40.0% | |
| ATAGGAGCCTCTGCAATAAA+AGG | - | chr3_3:83668740-83668759 | None:intergenic | 40.0% | |
| ! | TGTGATTGAGCCATCTTTTG+GGG | + | chr3_3:83668823-83668842 | Msa0478840:CDS | 40.0% |
| CAGTTGTGTACTTGACATCT+GGG | - | chr3_3:83668868-83668887 | None:intergenic | 40.0% | |
| ACAGTTGTGTACTTGACATC+TGG | - | chr3_3:83668869-83668888 | None:intergenic | 40.0% | |
| AGATGTCAAGTACACAACTG+TGG | + | chr3_3:83668868-83668887 | Msa0478840:CDS | 40.0% | |
| !! | TGTTACTTTGGAGTTTGACG+CGG | + | chr3_3:83668962-83668981 | Msa0478840:three_prime_UTR | 40.0% |
| TAAGAAGCAACAAGTAGGAG+AGG | - | chr3_3:83668998-83669017 | None:intergenic | 40.0% | |
| AAACTCAGATGACACCAAGA+AGG | - | chr3_3:83669101-83669120 | None:intergenic | 40.0% | |
| GCTCATAGTTTGACTAAGCA+CGG | - | chr3_3:83669206-83669225 | None:intergenic | 40.0% | |
| TGCTTAGTCAAACTATGAGC+AGG | + | chr3_3:83669206-83669225 | Msa0478840:three_prime_UTR | 40.0% | |
| GCTTAGTCAAACTATGAGCA+GGG | + | chr3_3:83669207-83669226 | Msa0478840:three_prime_UTR | 40.0% | |
| CTTAGTCAAACTATGAGCAG+GGG | + | chr3_3:83669208-83669227 | Msa0478840:three_prime_UTR | 40.0% | |
| CAGGGGAAACATTGAACAAA+TGG | + | chr3_3:83669225-83669244 | Msa0478840:three_prime_UTR | 40.0% | |
| ATCGGAGGAACAGGTTACAT+CGG | + | chr3_3:83666591-83666610 | Msa0478840:CDS | 45.0% | |
| GTAGAAGCAAGTGCAAAAGC+TGG | + | chr3_3:83666624-83666643 | Msa0478840:CDS | 45.0% | |
| !! | TGGACATCCCACTTTTGCAT+TGG | + | chr3_3:83666644-83666663 | Msa0478840:CDS | 45.0% |
| TCACGGACCAATGCAAAAGT+GGG | - | chr3_3:83666654-83666673 | None:intergenic | 45.0% | |
| TTCACGGACCAATGCAAAAG+TGG | - | chr3_3:83666655-83666674 | None:intergenic | 45.0% | |
| ACAGAGAGTGATCCTTTAGC+TGG | + | chr3_3:83666839-83666858 | Msa0478840:intron | 45.0% | |
| AGTGATCCTTTAGCTGGAAC+TGG | + | chr3_3:83666845-83666864 | Msa0478840:intron | 45.0% | |
| CTTGGTGAAAGCAATCAAGC+AGG | + | chr3_3:83666971-83666990 | Msa0478840:CDS | 45.0% | |
| AGCAATCAAGCAGGTAGATG+TGG | + | chr3_3:83666980-83666999 | Msa0478840:CDS | 45.0% | |
| GATGTGGTCATATCTACGGT+AGG | + | chr3_3:83666996-83667015 | Msa0478840:CDS | 45.0% | |
| ! | TAAGGAGGCTGGTAACGTTA+AGG | + | chr3_3:83667061-83667080 | Msa0478840:CDS | 45.0% |
| CATGTAACACCGCACAAAAG+TGG | + | chr3_3:83667641-83667660 | Msa0478840:intron | 45.0% | |
| !! | TGTGACTGTCCACTTTTGTG+CGG | - | chr3_3:83667653-83667672 | None:intergenic | 45.0% |
| TGGACAGTCACAATCATGGT+GGG | + | chr3_3:83667661-83667680 | Msa0478840:intron | 45.0% | |
| ! | GAATATTAGTTGGTGCTCCG+TGG | - | chr3_3:83667829-83667848 | None:intergenic | 45.0% |
| ACGTCATTCCCAAATTCCGA+AGG | - | chr3_3:83668051-83668070 | None:intergenic | 45.0% | |
| ! | ATTTTGCTGGATCTACCGCA+TGG | - | chr3_3:83668083-83668102 | None:intergenic | 45.0% |
| GTGTCTAGCAACTACTTTGC+TGG | + | chr3_3:83668168-83668187 | Msa0478840:CDS | 45.0% | |
| !! | TTTGTCTTTTGGAGGAGGTG+GGG | - | chr3_3:83668232-83668251 | None:intergenic | 45.0% |
| !! | CTTTGTCTTTTGGAGGAGGT+GGG | - | chr3_3:83668233-83668252 | None:intergenic | 45.0% |
| !! | ACTTTGTCTTTTGGAGGAGG+TGG | - | chr3_3:83668234-83668253 | None:intergenic | 45.0% |
| !! | ACGACTTTGTCTTTTGGAGG+AGG | - | chr3_3:83668237-83668256 | None:intergenic | 45.0% |
| TATGGCGATGGAAATCCCAA+AGG | + | chr3_3:83668261-83668280 | Msa0478840:CDS | 45.0% | |
| ATGTACAGCGGTGTTCAACA+AGG | + | chr3_3:83668451-83668470 | Msa0478840:intron | 45.0% | |
| ! | TGGATCATCCACAGCTCTAA+TGG | - | chr3_3:83668498-83668517 | None:intergenic | 45.0% |
| TTAGAGCTGTGGATGATCCA+AGG | + | chr3_3:83668498-83668517 | Msa0478840:CDS | 45.0% | |
| CCTTGTGGGAGAAGAAGATT+GGG | + | chr3_3:83668585-83668604 | Msa0478840:CDS | 45.0% | |
| GGTATTATCGATCCACCACT+CGG | + | chr3_3:83668772-83668791 | Msa0478840:CDS | 45.0% | |
| TAAGCCTCAACCCCAAAAGA+TGG | - | chr3_3:83668836-83668855 | None:intergenic | 45.0% | |
| TGTCAAGTACACAACTGTGG+AGG | + | chr3_3:83668871-83668890 | Msa0478840:CDS | 45.0% | |
| !!! | ATTTAAATATTTTTTATTTG+AGG | + | chr3_3:83667596-83667615 | Msa0478840:intron | 5.0% |
| TAACACACGCGTTGCATCCA+TGG | + | chr3_3:83666545-83666564 | Msa0478840:exon | 50.0% | |
| !! | TTGAGGAGATTAGCCTTGGC+AGG | - | chr3_3:83666693-83666712 | None:intergenic | 50.0% |
| CTTGATCCTCAATCAGAGCG+TGG | - | chr3_3:83667022-83667041 | None:intergenic | 50.0% | |
| ATCGCTGCAATTAAGGAGGC+TGG | + | chr3_3:83667050-83667069 | Msa0478840:CDS | 50.0% | |
| GTGGACAGTCACAATCATGG+TGG | + | chr3_3:83667660-83667679 | Msa0478840:intron | 50.0% | |
| ! | AGTCACAATCATGGTGGGAG+TGG | + | chr3_3:83667666-83667685 | Msa0478840:intron | 50.0% |
| ! | GTCACAATCATGGTGGGAGT+GGG | + | chr3_3:83667667-83667686 | Msa0478840:intron | 50.0% |
| TGACGTTGATCGTGTCCATG+CGG | + | chr3_3:83668065-83668084 | Msa0478840:CDS | 50.0% | |
| TGTCCTGGCTGAGCTAATGT+GGG | - | chr3_3:83668204-83668223 | None:intergenic | 50.0% | |
| TTGTCCTGGCTGAGCTAATG+TGG | - | chr3_3:83668205-83668224 | None:intergenic | 50.0% | |
| ! | TCAACGAGCTTGTAGCCTTG+TGG | + | chr3_3:83668570-83668589 | Msa0478840:CDS | 50.0% |
| !! | CAACGAGCTTGTAGCCTTGT+GGG | + | chr3_3:83668571-83668590 | Msa0478840:CDS | 50.0% |
| GCCTTGTGGGAGAAGAAGAT+TGG | + | chr3_3:83668584-83668603 | Msa0478840:CDS | 50.0% | |
| CCCAATCTTCTTCTCCCACA+AGG | - | chr3_3:83668588-83668607 | None:intergenic | 50.0% | |
| GGCTCCTATTCCAATCAACG+TGG | + | chr3_3:83668751-83668770 | Msa0478840:CDS | 50.0% | |
| CTTTCACAAACACCGAGTGG+TGG | - | chr3_3:83668787-83668806 | None:intergenic | 50.0% | |
| !! | CACCACTCGGTGTTTGTGAA+AGG | + | chr3_3:83668785-83668804 | Msa0478840:CDS | 50.0% |
| CACCTTTCACAAACACCGAG+TGG | - | chr3_3:83668790-83668809 | None:intergenic | 50.0% | |
| !!! | TGAGCCATCTTTTGGGGTTG+AGG | + | chr3_3:83668829-83668848 | Msa0478840:CDS | 50.0% |
| ! | GATCAGCGAGGGTGGATTCA+CGG | - | chr3_3:83666671-83666690 | None:intergenic | 55.0% |
| ! | ATCATGGTGGGAGTGGGATC+CGG | + | chr3_3:83667673-83667692 | Msa0478840:intron | 55.0% |
| ! | CGACGTGCTATTGAAGCGGA+AGG | + | chr3_3:83668129-83668148 | Msa0478840:CDS | 55.0% |
| GTCCTGGCTGAGCTAATGTG+GGG | - | chr3_3:83668203-83668222 | None:intergenic | 55.0% | |
| AGCCTTGGCAGGATCAGCGA+GGG | - | chr3_3:83666682-83666701 | None:intergenic | 60.0% | |
| ! | TAGCCTTGGCAGGATCAGCG+AGG | - | chr3_3:83666683-83666702 | None:intergenic | 60.0% |
| GGTAGGCCACGCTCTGATTG+AGG | + | chr3_3:83667013-83667032 | Msa0478840:CDS | 60.0% | |
| GGGAGTGGGATCCGGCAATT+TGG | + | chr3_3:83667681-83667700 | Msa0478840:intron | 60.0% | |
| CTCCCCACATTAGCTCAGCC+AGG | + | chr3_3:83668198-83668217 | Msa0478840:CDS | 60.0% | |
| CTTGGCAGGATCAGCGAGGG+TGG | - | chr3_3:83666679-83666698 | None:intergenic | 65.0% | |
| CACCCTCGCTGATCCTGCCA+AGG | + | chr3_3:83666677-83666696 | Msa0478840:CDS | 65.0% | |
| GGAGGTGGGGCGAATTGTCC+TGG | - | chr3_3:83668219-83668238 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 83666463 | 83669277 | 83666463 | ID=Msa0478840;Name=Msa0478840 |
| chr3_3 | mRNA | 83666463 | 83669277 | 83666463 | ID=Msa0478840-mRNA-1;Parent=Msa0478840;Name=Msa0478840-mRNA-1;_AED=0.29;_eAED=0.29;_QI=101|1|1|1|0.8|0.66|6|339|310 |
| chr3_3 | exon | 83666463 | 83666746 | 83666463 | ID=Msa0478840-mRNA-1:exon:23558;Parent=Msa0478840-mRNA-1 |
| chr3_3 | exon | 83666948 | 83667082 | 83666948 | ID=Msa0478840-mRNA-1:exon:23559;Parent=Msa0478840-mRNA-1 |
| chr3_3 | exon | 83668039 | 83668282 | 83668039 | ID=Msa0478840-mRNA-1:exon:23560;Parent=Msa0478840-mRNA-1 |
| chr3_3 | exon | 83668459 | 83668662 | 83668459 | ID=Msa0478840-mRNA-1:exon:23561;Parent=Msa0478840-mRNA-1 |
| chr3_3 | exon | 83668750 | 83668988 | 83668750 | ID=Msa0478840-mRNA-1:exon:23562;Parent=Msa0478840-mRNA-1 |
| chr3_3 | exon | 83669011 | 83669277 | 83669011 | ID=Msa0478840-mRNA-1:exon:23563;Parent=Msa0478840-mRNA-1 |
| chr3_3 | five_prime_UTR | 83666463 | 83666563 | 83666463 | ID=Msa0478840-mRNA-1:five_prime_utr;Parent=Msa0478840-mRNA-1 |
| chr3_3 | CDS | 83666564 | 83666746 | 83666564 | ID=Msa0478840-mRNA-1:cds;Parent=Msa0478840-mRNA-1 |
| chr3_3 | CDS | 83666948 | 83667082 | 83666948 | ID=Msa0478840-mRNA-1:cds;Parent=Msa0478840-mRNA-1 |
| chr3_3 | CDS | 83668039 | 83668282 | 83668039 | ID=Msa0478840-mRNA-1:cds;Parent=Msa0478840-mRNA-1 |
| chr3_3 | CDS | 83668459 | 83668662 | 83668459 | ID=Msa0478840-mRNA-1:cds;Parent=Msa0478840-mRNA-1 |
| chr3_3 | CDS | 83668750 | 83668916 | 83668750 | ID=Msa0478840-mRNA-1:cds;Parent=Msa0478840-mRNA-1 |
| chr3_3 | three_prime_UTR | 83668917 | 83668988 | 83668917 | ID=Msa0478840-mRNA-1:three_prime_utr;Parent=Msa0478840-mRNA-1 |
| chr3_3 | three_prime_UTR | 83669011 | 83669277 | 83669011 | ID=Msa0478840-mRNA-1:three_prime_utr;Parent=Msa0478840-mRNA-1 |
| Gene Sequence |
| Protein sequence |
