AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0419970


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0419970 MtrunA17_Chr3g0118661 97.521 484 12 0 1 484 1 484 0.0 986
Msa0419970 MtrunA17_Chr3g0118711 65.962 473 160 1 10 481 10 482 0.0 661
Msa0419970 MtrunA17_Chr3g0118771 65.690 478 163 1 8 484 16 493 0.0 657
Msa0419970 MtrunA17_Chr3g0118691 64.496 476 168 1 10 484 12 487 0.0 649
Msa0419970 MtrunA17_Chr3g0118701 64.496 476 168 1 10 484 12 487 0.0 649
Msa0419970 MtrunA17_Chr3g0118671 62.815 476 176 1 10 484 3 478 0.0 646
Msa0419970 MtrunA17_Chr3g0118751 62.105 475 152 2 10 484 3 449 0.0 607
Msa0419970 MtrunA17_Chr5g0426431 52.665 469 217 4 13 479 12 477 1.49e-180 514
Msa0419970 MtrunA17_Chr3g0092641 51.064 470 225 4 12 479 11 477 4.31e-175 500
Msa0419970 MtrunA17_Chr3g0078841 48.729 472 239 2 9 478 6 476 1.27e-170 489
Msa0419970 MtrunA17_Chr6g0454191 49.061 479 236 3 7 479 4 480 9.29e-170 487
Msa0419970 MtrunA17_Chr6g0454401 50.105 477 230 3 9 479 6 480 2.65e-167 481
Msa0419970 MtrunA17_Chr6g0454341 47.992 473 243 2 9 479 6 477 8.86e-167 479
Msa0419970 MtrunA17_Chr6g0454181 47.479 476 241 5 10 479 7 479 6.06e-162 467
Msa0419970 MtrunA17_Chr6g0454301 48.945 474 237 4 9 479 259 730 6.43e-162 476
Msa0419970 MtrunA17_Chr6g0454301 53.712 229 102 2 251 478 3 228 6.83e-78 258
Msa0419970 MtrunA17_Chr6g0454331 48.637 477 234 5 11 479 5 478 1.13e-160 464
Msa0419970 MtrunA17_Chr6g0454321 47.084 463 242 2 9 469 6 467 1.88e-160 469
Msa0419970 MtrunA17_Chr6g0454321 46.341 123 61 2 10 127 501 623 8.09e-24 105
Msa0419970 MtrunA17_Chr8g0336331 47.034 472 248 2 9 479 6 476 3.35e-160 462
Msa0419970 MtrunA17_Chr2g0278711 48.033 483 238 7 3 479 1 476 3.37e-159 460
Msa0419970 MtrunA17_Chr4g0050341 46.921 471 245 3 11 476 17 487 7.80e-159 459
Msa0419970 MtrunA17_Chr6g0453951 47.433 487 244 6 2 479 43 526 9.50e-157 456
Msa0419970 MtrunA17_Chr6g0454211 49.370 476 232 5 10 479 294 766 1.07e-156 464
Msa0419970 MtrunA17_Chr6g0454211 40.741 270 125 5 129 397 1 236 3.65e-60 211
Msa0419970 MtrunA17_Chr6g0454361 48.632 475 235 5 11 479 9 480 1.68e-155 451
Msa0419970 MtrunA17_Chr6g0454201 49.895 475 229 5 11 479 9 480 1.77e-155 451
Msa0419970 MtrunA17_Chr8g0359821 45.992 474 249 4 10 479 7 477 4.23e-155 449
Msa0419970 MtrunA17_Chr6g0453961 46.947 475 244 4 11 479 17 489 8.46e-155 449
Msa0419970 MtrunA17_Chr6g0454261 46.639 476 245 5 10 479 7 479 1.00e-154 449
Msa0419970 MtrunA17_Chr6g0454291 48.109 476 238 5 10 479 4 476 1.92e-153 445
Msa0419970 MtrunA17_Chr6g0454151 47.789 475 239 4 10 479 7 477 6.20e-151 439
Msa0419970 MtrunA17_Chr6g0454141 44.842 475 255 3 10 479 7 479 4.31e-149 434
Msa0419970 MtrunA17_Chr6g0454351 46.331 477 230 6 9 479 8 464 7.53e-149 433
Msa0419970 MtrunA17_Chr6g0454131 46.512 473 247 3 11 479 8 478 2.28e-148 432
Msa0419970 MtrunA17_Chr6g0454121 45.666 473 251 3 11 479 8 478 1.49e-146 428
Msa0419970 MtrunA17_Chr6g0452771 46.429 476 246 5 10 479 7 479 5.82e-145 424
Msa0419970 MtrunA17_Chr3g0118721 63.605 294 106 1 192 484 1 294 2.13e-138 400
Msa0419970 MtrunA17_Chr5g0423981 44.632 475 219 5 11 479 8 444 5.85e-137 402
Msa0419970 MtrunA17_Chr7g0217881 43.908 476 240 6 10 479 7 461 1.49e-135 399
Msa0419970 MtrunA17_Chr6g0454251 46.701 394 201 5 10 397 4 394 4.97e-124 367
Msa0419970 MtrunA17_Chr5g0426401 52.962 287 128 5 173 456 4 286 1.39e-105 317
Msa0419970 MtrunA17_Chr6g0454271 52.941 289 132 3 192 479 1 286 3.82e-103 310
Msa0419970 MtrunA17_Chr8g0355011 41.033 368 171 3 113 479 39 361 4.29e-96 295
Msa0419970 MtrunA17_Chr5g0412131 36.765 476 272 13 12 477 11 467 2.32e-89 281
Msa0419970 MtrunA17_Chr5g0412101 36.421 475 276 11 12 477 11 468 5.57e-89 280
Msa0419970 MtrunA17_Chr6g0454221 55.844 231 101 1 251 481 3 232 2.91e-88 272
Msa0419970 MtrunA17_Chr6g0454171 41.690 355 157 5 129 479 1 309 4.03e-87 270
Msa0419970 MtrunA17_Chr5g0412111 35.537 484 270 14 10 477 2 459 3.55e-84 267
Msa0419970 MtrunA17_Chr3g0112771 34.244 476 280 9 14 486 13 458 2.79e-82 262
Msa0419970 MtrunA17_Chr3g0112761 33.902 469 275 13 13 476 8 446 3.41e-74 241
Msa0419970 MtrunA17_Chr4g0032331 32.143 476 280 11 11 477 6 447 3.92e-74 241
Msa0419970 MtrunA17_Chr7g0218811 31.770 469 280 11 4 468 6 438 6.68e-74 240
Msa0419970 MtrunA17_Chr7g0218821 32.911 474 268 13 12 470 4 442 1.38e-69 229
Msa0419970 MtrunA17_Chr7g0218831 31.078 473 277 10 12 476 5 436 7.59e-69 226
Msa0419970 MtrunA17_Chr7g0250001 30.943 488 278 15 11 481 4 449 1.99e-68 226
Msa0419970 MtrunA17_Chr7g0218791 29.854 479 288 10 12 478 4 446 3.24e-68 225
Msa0419970 MtrunA17_Chr7g0218841 31.224 474 276 11 12 476 5 437 1.44e-67 223
Msa0419970 MtrunA17_Chr1g0207981 32.099 486 283 16 13 478 13 471 3.38e-67 223
Msa0419970 MtrunA17_Chr5g0414331 30.882 476 287 13 1 468 1 442 1.42e-65 219
Msa0419970 MtrunA17_Chr6g0464881 30.687 466 288 11 9 468 7 443 1.48e-65 218
Msa0419970 MtrunA17_Chr3g0098111 30.103 485 304 14 9 478 4 468 8.10e-65 217
Msa0419970 MtrunA17_Chr7g0249981 29.508 488 279 13 9 476 21 463 1.44e-64 216
Msa0419970 MtrunA17_Chr6g0464921 30.185 487 296 12 7 482 5 458 2.92e-63 212
Msa0419970 MtrunA17_Chr6g0453981 44.783 230 123 3 129 357 1 227 3.97e-63 205
Msa0419970 MtrunA17_Chr5g0414321 30.323 465 280 13 13 468 11 440 3.06e-62 210
Msa0419970 MtrunA17_Chr6g0464871 31.020 461 285 11 13 468 23 455 6.19e-62 209
Msa0419970 MtrunA17_Chr6g0454371 55.294 170 76 0 310 479 1 170 1.24e-61 199
Msa0419970 MtrunA17_Chr6g0464841 31.328 482 284 15 13 482 11 457 1.26e-61 208
Msa0419970 MtrunA17_Chr8g0336271 40.833 240 141 1 9 247 6 245 1.78e-61 202
Msa0419970 MtrunA17_Chr6g0464861 30.879 489 284 14 9 482 7 456 5.89e-61 206
Msa0419970 MtrunA17_Chr8g0365811 29.032 496 303 14 6 478 487 956 7.02e-61 214
Msa0419970 MtrunA17_Chr8g0365811 28.145 469 298 13 6 454 1 450 3.88e-51 187
Msa0419970 MtrunA17_Chr6g0454231 45.098 255 99 4 226 479 4 218 1.90e-59 202
Msa0419970 MtrunA17_Chr6g0454231 40.086 232 137 1 9 238 246 477 2.01e-54 189
Msa0419970 MtrunA17_Chr5g0426411 55.488 164 72 1 10 172 9 172 2.20e-59 193
Msa0419970 MtrunA17_Chr5g0401721 28.425 489 316 15 6 479 1 470 5.43e-58 199
Msa0419970 MtrunA17_Chr1g0207861 29.792 480 303 13 13 478 8 467 7.46e-58 199
Msa0419970 MtrunA17_Chr8g0377921 29.132 484 299 15 12 476 2 460 9.55e-58 198
Msa0419970 MtrunA17_Chr3g0122001 29.435 496 310 14 3 478 476 951 2.29e-57 204
Msa0419970 MtrunA17_Chr3g0122001 29.328 491 306 13 9 478 2 472 2.60e-57 204
Msa0419970 MtrunA17_Chr1g0207971 28.243 478 298 13 13 478 8 452 3.48e-57 196
Msa0419970 MtrunA17_Chr1g0161351 29.876 482 300 14 13 478 37 496 4.31e-57 197
Msa0419970 MtrunA17_Chr8g0380531 27.917 480 304 15 13 479 10 460 8.12e-57 195
Msa0419970 MtrunA17_Chr3g0121991 29.666 509 290 18 4 478 70 544 1.99e-56 196
Msa0419970 MtrunA17_Chr7g0249931 27.869 488 291 17 13 481 40 485 7.78e-56 193
Msa0419970 MtrunA17_Chr1g0207831 29.098 488 305 13 6 478 1 462 1.67e-55 192
Msa0419970 MtrunA17_Chr4g0053501 28.283 495 304 14 3 478 1 463 9.34e-55 191
Msa0419970 MtrunA17_Chr5g0431361 30.083 482 280 17 13 478 12 452 3.16e-54 188
Msa0419970 MtrunA17_Chr5g0431401 29.691 485 275 16 13 478 10 447 8.18e-54 187
Msa0419970 MtrunA17_Chr8g0336261 58.394 137 57 0 310 446 1 137 1.23e-53 177
Msa0419970 MtrunA17_Chr1g0207951 28.750 480 294 15 13 478 124 569 4.72e-53 192
Msa0419970 MtrunA17_Chr1g0207951 27.235 481 298 15 13 473 656 1104 1.11e-48 180
Msa0419970 MtrunA17_Chr5g0431421 29.814 483 281 14 13 480 10 449 5.94e-53 185
Msa0419970 MtrunA17_Chr5g0431441 28.008 482 302 15 13 481 18 467 7.08e-53 185
Msa0419970 MtrunA17_Chr6g0453941 45.000 220 116 4 132 349 56 272 1.11e-52 179
Msa0419970 MtrunA17_Chr8g0334851 29.209 493 284 12 11 472 4 462 4.45e-52 183
Msa0419970 MtrunA17_Chr5g0440421 31.041 509 287 23 10 476 7 493 1.61e-51 182
Msa0419970 MtrunA17_Chr5g0431371 29.545 484 277 16 13 478 10 447 2.18e-51 181
Msa0419970 MtrunA17_Chr7g0232401 26.489 487 291 13 13 468 6 456 3.01e-51 181
Msa0419970 MtrunA17_Chr8g0336741 28.367 490 283 13 8 467 8 459 4.18e-51 180
Msa0419970 MtrunA17_Chr4g0044511 28.773 497 298 15 9 478 36 503 1.85e-50 179
Msa0419970 MtrunA17_Chr8g0377941 28.631 482 298 14 14 478 8 460 3.02e-50 178
Msa0419970 MtrunA17_Chr4g0053321 29.234 496 300 19 3 478 14 478 2.12e-49 176
Msa0419970 MtrunA17_Chr5g0393591 28.112 466 275 10 13 472 17 428 3.02e-49 175
Msa0419970 MtrunA17_Chr8g0336731 28.921 491 283 17 15 476 34 487 5.59e-49 175
Msa0419970 MtrunA17_Chr6g0462541 31.980 394 220 12 111 486 106 469 2.10e-48 173
Msa0419970 MtrunA17_Chr6g0454281 44.974 189 99 2 10 193 7 195 4.57e-48 165
Msa0419970 MtrunA17_Chr6g0462571 27.856 499 283 15 11 475 2 457 6.69e-48 172
Msa0419970 MtrunA17_Chr1g0153451 28.893 488 288 16 13 475 6 459 6.99e-48 171
Msa0419970 MtrunA17_Chr1g0207931 33.716 261 161 3 230 482 244 500 1.81e-47 171
Msa0419970 MtrunA17_Chr1g0159551 26.403 481 273 15 18 468 19 448 2.05e-47 170
Msa0419970 MtrunA17_Chr3g0106231 28.274 481 282 16 13 478 18 450 2.57e-47 170
Msa0419970 MtrunA17_Chr6g0459311 27.364 497 295 15 1 468 1 460 3.67e-47 170
Msa0419970 MtrunA17_Chr7g0243681 28.656 506 283 20 13 478 11 478 1.06e-46 169
Msa0419970 MtrunA17_Chr8g0347281 29.132 484 277 17 12 468 17 461 2.84e-46 167
Msa0419970 MtrunA17_Chr8g0339461 31.088 386 202 11 120 472 110 464 2.91e-46 167
Msa0419970 MtrunA17_Chr8g0373301 29.798 396 222 13 105 475 98 462 4.38e-46 167
Msa0419970 MtrunA17_Chr8g0336651 26.775 493 293 13 13 475 6 460 6.85e-46 172
Msa0419970 MtrunA17_Chr8g0336651 28.200 500 267 17 13 468 781 1232 6.08e-45 169
Msa0419970 MtrunA17_Chr8g0336651 30.739 257 139 5 227 475 545 770 9.54e-33 132
Msa0419970 MtrunA17_Chr1g0173121 26.931 479 284 15 14 468 15 451 1.09e-45 166
Msa0419970 MtrunA17_Chr7g0232331 26.939 490 291 18 9 467 2 455 1.68e-45 165
Msa0419970 MtrunA17_Chr6g0449931 29.839 496 267 18 11 468 4 456 2.06e-45 165
Msa0419970 MtrunA17_Chr8g0339631 28.608 388 230 11 104 468 94 457 2.30e-45 165
Msa0419970 MtrunA17_Chr5g0448551 25.225 444 297 11 10 447 4 418 3.21e-45 164
Msa0419970 MtrunA17_Chr8g0361371 26.978 493 289 16 10 468 4 459 3.48e-45 164
Msa0419970 MtrunA17_Chr7g0275681 28.169 497 299 15 12 478 11 479 3.76e-45 164
Msa0419970 MtrunA17_Chr6g0462531 28.221 489 283 18 11 468 2 453 6.77e-45 163
Msa0419970 MtrunA17_Chr8g0335161 28.398 493 281 18 9 468 2 455 7.46e-45 163
Msa0419970 MtrunA17_Chr7g0232391 28.370 497 281 20 13 475 6 461 7.58e-45 163
Msa0419970 MtrunA17_Chr7g0232411 27.218 496 288 17 13 475 6 461 9.01e-45 163
Msa0419970 MtrunA17_Chr7g0275511 28.455 492 290 16 12 475 14 471 1.05e-44 163
Msa0419970 MtrunA17_Chr8g0335141 28.484 488 286 19 9 468 5 457 1.17e-44 163
Msa0419970 MtrunA17_Chr4g0072761 26.778 478 295 14 13 477 15 450 1.43e-44 162
Msa0419970 MtrunA17_Chr8g0347271 28.512 484 280 16 12 468 18 462 1.74e-44 162
Msa0419970 MtrunA17_Chr8g0336691 27.789 493 290 16 13 475 919 1375 2.21e-44 167
Msa0419970 MtrunA17_Chr8g0336691 26.263 495 295 13 13 475 13 469 7.43e-43 163
Msa0419970 MtrunA17_Chr8g0336691 27.368 475 273 16 13 468 480 901 6.14e-41 157
Msa0419970 MtrunA17_Chr6g0486251 27.572 486 282 15 14 468 7 453 2.55e-44 162
Msa0419970 MtrunA17_Chr6g0486201 27.572 486 282 15 14 468 7 453 2.55e-44 162
Msa0419970 MtrunA17_Chr7g0243631 27.875 513 297 21 6 478 6 485 2.65e-44 162
Msa0419970 MtrunA17_Chr7g0265041 25.490 510 321 16 12 486 10 495 2.91e-44 162
Msa0419970 MtrunA17_Chr1g0179901 25.646 503 317 15 13 481 16 495 3.48e-44 162
Msa0419970 MtrunA17_Chr5g0429711 27.071 495 307 15 3 478 1 460 4.11e-44 161
Msa0419970 MtrunA17_Chr6g0462551 31.234 381 221 11 111 475 105 460 9.10e-44 160
Msa0419970 MtrunA17_Chr5g0442541 28.458 506 278 19 10 476 2 462 1.19e-43 160
Msa0419970 MtrunA17_Chr4g0072771 25.263 475 315 11 10 477 22 463 1.82e-43 159
Msa0419970 MtrunA17_Chr5g0442581 27.734 512 285 18 10 476 2 473 2.57e-43 160
Msa0419970 MtrunA17_Chr4g0066221 27.347 490 303 14 17 478 15 479 2.72e-43 159
Msa0419970 MtrunA17_Chr8g0366391 28.138 494 313 14 7 478 3 476 3.48e-43 159
Msa0419970 MtrunA17_Chr8g0339451 28.504 421 244 11 78 468 59 452 6.05e-43 158
Msa0419970 MtrunA17_Chr2g0329111 28.838 482 294 17 9 465 2 459 8.47e-43 158
Msa0419970 MtrunA17_Chr6g0462521 30.667 375 207 12 111 468 101 439 8.90e-43 157
Msa0419970 MtrunA17_Chr7g0243931 27.800 500 308 15 9 478 13 489 1.54e-42 157
Msa0419970 MtrunA17_Chr5g0448521 27.689 502 277 19 10 470 2 458 1.65e-42 157
Msa0419970 MtrunA17_Chr4g0060511 28.175 504 296 18 13 478 11 486 2.66e-42 157
Msa0419970 MtrunA17_Chr7g0243801 28.628 503 296 16 9 478 3 475 4.58e-42 156
Msa0419970 MtrunA17_Chr7g0243771 27.655 499 298 16 13 478 6 474 1.32e-41 155
Msa0419970 MtrunA17_Chr5g0442561 27.559 508 287 20 10 476 2 469 2.12e-41 154
Msa0419970 MtrunA17_Chr4g0066281 26.295 502 278 17 17 478 16 465 2.33e-41 154
Msa0419970 MtrunA17_Chr5g0442601 29.528 508 287 25 7 476 398 872 3.15e-41 157
Msa0419970 MtrunA17_Chr5g0442601 29.524 315 167 8 119 420 61 333 9.41e-28 117
Msa0419970 MtrunA17_Chr7g0249961 33.884 242 144 5 242 476 24 256 3.28e-41 148
Msa0419970 MtrunA17_Chr4g0014061 26.829 492 299 18 14 476 10 469 3.72e-41 153
Msa0419970 MtrunA17_Chr8g0334831 27.216 485 270 18 10 450 3 448 5.34e-41 153
Msa0419970 MtrunA17_Chr7g0232341 26.253 499 283 19 9 467 2 455 6.06e-41 152
Msa0419970 MtrunA17_Chr7g0265141 27.347 490 310 13 7 468 3 474 8.82e-41 152
Msa0419970 MtrunA17_Chr5g0419771 25.301 498 324 12 13 481 36 514 1.22e-40 152
Msa0419970 MtrunA17_Chr8g0339601 30.794 315 171 8 190 475 30 326 1.62e-40 148
Msa0419970 MtrunA17_Chr2g0302961 26.626 492 307 14 11 478 3 464 3.11e-40 150
Msa0419970 MtrunA17_Chr5g0442521 27.362 508 291 20 10 476 2 472 4.61e-40 150
Msa0419970 MtrunA17_Chr5g0428081 27.959 490 299 17 17 478 15 478 5.12e-40 150
Msa0419970 MtrunA17_Chr8g0374941 25.536 513 282 14 17 478 953 1416 5.92e-40 154
Msa0419970 MtrunA17_Chr8g0374941 24.699 498 275 15 17 463 15 463 2.58e-33 134
Msa0419970 MtrunA17_Chr8g0374941 24.649 499 270 16 17 461 480 926 3.71e-32 131
Msa0419970 MtrunA17_Chr7g0232311 27.108 498 276 18 10 468 3 452 6.70e-40 150
Msa0419970 MtrunA17_Chr5g0419761 27.565 497 308 16 13 478 9 484 1.20e-39 149
Msa0419970 MtrunA17_Chr5g0442511 26.419 511 274 18 6 476 42 490 2.87e-39 149
Msa0419970 MtrunA17_Chr7g0243951 27.092 502 304 16 11 478 9 482 5.76e-39 147
Msa0419970 MtrunA17_Chr6g0454111 42.945 163 90 2 169 330 23 183 1.28e-38 139
Msa0419970 MtrunA17_Chr8g0374901 25.581 516 276 17 17 478 16 477 1.44e-38 146
Msa0419970 MtrunA17_Chr8g0334861 26.166 493 287 18 10 468 3 452 2.19e-38 145
Msa0419970 MtrunA17_Chr4g0066201 27.898 509 297 19 3 481 8 476 2.30e-38 145
Msa0419970 MtrunA17_Chr8g0374931 26.707 498 297 16 17 478 15 480 2.59e-38 145
Msa0419970 MtrunA17_Chr2g0294931 25.941 505 306 15 10 478 8 480 2.94e-38 145
Msa0419970 MtrunA17_Chr7g0243871 25.591 508 303 19 7 478 3 471 5.47e-38 145
Msa0419970 MtrunA17_Chr5g0403641 32.056 287 154 7 221 478 227 501 5.70e-38 145
Msa0419970 MtrunA17_Chr3g0118731 61.111 108 42 0 65 172 28 135 6.48e-38 136
Msa0419970 MtrunA17_Chr5g0432731 30.573 314 182 9 183 481 6 298 7.34e-38 140
Msa0419970 MtrunA17_Chr5g0442491 26.275 510 293 17 10 476 2 471 7.44e-38 144
Msa0419970 MtrunA17_Chr8g0370941 25.919 517 293 16 13 477 8 486 8.20e-38 145
Msa0419970 MtrunA17_Chr5g0429681 29.307 505 286 22 1 476 34 496 9.47e-38 144
Msa0419970 MtrunA17_Chr3g0079731 25.344 509 298 16 14 477 7 478 1.16e-37 144
Msa0419970 MtrunA17_Chr8g0374971 24.260 507 296 13 17 478 16 479 1.46e-37 144
Msa0419970 MtrunA17_Chr8g0382021 26.105 475 291 15 18 468 39 477 2.05e-37 143
Msa0419970 MtrunA17_Chr8g0339441 35.377 212 109 4 287 474 217 424 3.51e-37 141
Msa0419970 MtrunA17_Chr4g0066261 26.667 495 301 17 17 478 15 480 6.05e-37 142
Msa0419970 MtrunA17_Chr4g0044501 25.309 486 322 13 13 478 10 474 9.68e-37 141
Msa0419970 MtrunA17_Chr7g0243781 25.050 499 320 16 7 478 3 474 1.72e-36 140
Msa0419970 MtrunA17_Chr7g0243761 26.392 485 296 16 13 478 11 453 1.90e-36 140
Msa0419970 MtrunA17_Chr2g0294921 25.806 496 304 15 17 478 164 629 2.16e-36 142
Msa0419970 MtrunA17_Chr1g0153461 35.096 208 118 3 285 475 1 208 2.20e-36 134
Msa0419970 MtrunA17_Chr7g0265111 25.731 513 307 18 13 483 39 519 2.39e-36 141
Msa0419970 MtrunA17_Chr7g0235051 26.518 494 283 18 13 478 11 452 2.69e-36 140
Msa0419970 MtrunA17_Chr7g0265101 25.904 498 332 14 5 478 1 485 4.81e-36 139
Msa0419970 MtrunA17_Chr7g0265151 27.416 507 304 20 9 478 3 482 4.82e-36 139
Msa0419970 MtrunA17_Chr7g0265051 26.139 505 314 18 9 478 3 483 6.00e-36 139
Msa0419970 MtrunA17_Chr4g0044521 26.994 489 290 18 18 477 14 464 7.09e-36 139
Msa0419970 MtrunA17_Chr7g0243861 25.956 497 313 14 13 478 14 486 1.06e-35 139
Msa0419970 MtrunA17_Chr6g0463851 26.210 496 303 17 17 478 15 481 1.33e-35 138
Msa0419970 MtrunA17_Chr4g0011051 25.977 512 303 16 11 478 7 486 1.56e-35 138
Msa0419970 MtrunA17_Chr7g0243851 27.755 490 275 18 11 478 9 441 3.32e-35 136
Msa0419970 MtrunA17_Chr3g0106251 30.363 303 180 8 186 478 11 292 6.15e-35 132
Msa0419970 MtrunA17_Chr8g0350881 24.758 517 287 14 14 478 13 479 1.69e-34 135
Msa0419970 MtrunA17_Chr7g0241801 28.855 454 263 18 10 456 6 406 3.16e-34 133
Msa0419970 MtrunA17_Chr2g0302991 26.016 492 307 14 11 478 3 461 3.28e-34 134
Msa0419970 MtrunA17_Chr5g0401851 24.699 498 314 15 15 478 12 482 6.52e-34 133
Msa0419970 MtrunA17_Chr5g0410941 26.016 492 304 16 17 478 27 488 1.06e-33 133
Msa0419970 MtrunA17_Chr6g0463861 25.963 493 299 16 17 478 15 472 1.15e-33 132
Msa0419970 MtrunA17_Chr4g0044481 27.059 425 243 14 13 422 27 399 1.55e-33 131
Msa0419970 MtrunA17_Chr4g0066151 24.949 493 303 15 17 478 22 478 1.60e-32 129
Msa0419970 MtrunA17_Chr7g0218311 24.949 493 309 18 17 478 20 482 1.62e-32 129
Msa0419970 MtrunA17_Chr5g0420801 26.626 492 298 21 9 476 3 455 1.98e-31 126
Msa0419970 MtrunA17_Chr4g0066131 25.358 489 294 17 17 472 17 467 1.16e-30 124
Msa0419970 MtrunA17_Chr8g0369341 25.703 498 307 20 9 477 3 466 1.64e-30 123
Msa0419970 MtrunA17_Chr8g0336321 26.304 460 293 17 13 453 7 439 2.06e-30 123
Msa0419970 MtrunA17_Chr4g0042891 27.297 381 215 11 101 466 119 452 2.21e-30 123
Msa0419970 MtrunA17_Chr7g0241781 26.998 463 264 17 10 458 6 408 2.50e-30 122
Msa0419970 MtrunA17_Chr8g0361411 25.667 487 313 20 6 478 1 452 4.47e-30 122
Msa0419970 MtrunA17_Chr2g0294941 28.313 332 187 10 162 463 53 363 6.42e-30 120
Msa0419970 MtrunA17_Chr8g0367221 26.151 478 309 16 13 473 798 1248 7.73e-30 124
Msa0419970 MtrunA17_Chr8g0367221 26.039 457 287 18 13 449 12 437 1.46e-26 114
Msa0419970 MtrunA17_Chr8g0367221 24.516 465 313 13 13 463 1288 1728 5.73e-26 112
Msa0419970 MtrunA17_Chr4g0042931 26.132 486 307 16 13 477 7 461 2.15e-29 120
Msa0419970 MtrunA17_Chr8g0336251 26.087 460 294 17 13 453 7 439 3.02e-29 120
Msa0419970 MtrunA17_Chr8g0355221 24.795 488 326 16 14 478 16 485 1.15e-28 118
Msa0419970 MtrunA17_Chr4g0029131 27.004 474 275 18 13 460 12 440 1.62e-28 119
Msa0419970 MtrunA17_Chr3g0118741 81.034 58 11 0 10 67 3 60 2.06e-28 107
Msa0419970 MtrunA17_Chr7g0243711 33.019 212 117 6 288 478 108 315 2.77e-28 114
Msa0419970 MtrunA17_Chr6g0464091 27.654 405 252 15 13 405 18 393 3.49e-28 117
Msa0419970 MtrunA17_Chr4g0066171 25.562 489 299 19 17 478 25 475 6.51e-28 116
Msa0419970 MtrunA17_Chr1g0165701 24.330 485 329 15 14 478 16 482 6.52e-28 116
Msa0419970 MtrunA17_Chr7g0232351 28.293 410 232 18 13 397 6 378 1.03e-27 114
Msa0419970 MtrunA17_Chr2g0278741 26.247 461 300 16 9 456 92 525 1.39e-27 115
Msa0419970 MtrunA17_Chr5g0409591 23.800 479 294 14 15 449 5 456 3.93e-27 114
Msa0419970 MtrunA17_Chr7g0243911 32.057 209 115 5 260 451 4 202 4.22e-27 108
Msa0419970 MtrunA17_Chr5g0416741 23.320 506 336 17 1 478 1 482 5.03e-27 114
Msa0419970 MtrunA17_Chr6g0463891 24.494 494 321 16 14 478 13 483 5.99e-27 113
Msa0419970 MtrunA17_Chr1g0196851 25.957 470 288 18 13 460 49 480 6.85e-27 113
Msa0419970 MtrunA17_Chr5g0431431 29.740 269 158 8 183 445 110 353 2.55e-26 109
Msa0419970 MtrunA17_Chr6g0466831 25.270 463 292 13 13 458 18 443 3.55e-26 110
Msa0419970 MtrunA17_Chr7g0243611 29.316 307 181 12 147 432 5 296 9.93e-26 106
Msa0419970 MtrunA17_Chr2g0278721 26.509 464 297 17 13 457 517 955 1.01e-25 111
Msa0419970 MtrunA17_Chr2g0278721 25.673 483 307 19 9 473 10 458 8.47e-25 108
Msa0419970 MtrunA17_Chr6g0454381 38.571 140 84 2 129 267 1 139 1.34e-25 102
Msa0419970 MtrunA17_Chr6g0482061 24.380 484 310 17 13 467 11 467 1.43e-25 109
Msa0419970 MtrunA17_Chr5g0416821 23.819 487 320 17 14 478 15 472 1.84e-25 108
Msa0419970 MtrunA17_Chr2g0307961 29.885 261 162 8 226 477 218 466 3.78e-25 108
Msa0419970 MtrunA17_Chr6g0466841 26.078 464 287 16 13 458 18 443 4.16e-25 107
Msa0419970 MtrunA17_Chr1g0207881 36.170 141 83 2 334 468 234 373 1.14e-24 105
Msa0419970 MtrunA17_Chr4g0069611 26.395 466 279 19 13 456 15 438 5.30e-24 104
Msa0419970 MtrunA17_Chr3g0079711 33.152 184 103 5 314 477 3 186 8.18e-24 98.6
Msa0419970 MtrunA17_Chr7g0250021 27.928 333 195 12 13 334 12 310 1.86e-23 100
Msa0419970 MtrunA17_Chr2g0302851 26.536 407 247 15 13 405 16 384 2.13e-23 102
Msa0419970 MtrunA17_Chr4g0029151 25.000 464 297 15 13 460 20 448 6.61e-23 101
Msa0419970 MtrunA17_Chr7g0243811 24.250 400 258 13 25 412 1 367 2.35e-22 99.0
Msa0419970 MtrunA17_Chr8g0337381 42.149 121 64 2 359 475 3 121 3.56e-22 92.0
Msa0419970 MtrunA17_Chr5g0427571 27.848 237 156 7 227 453 42 273 2.02e-21 94.7
Msa0419970 MtrunA17_Chr5g0427561 47.619 84 44 0 396 479 1 84 2.64e-21 88.2
Msa0419970 MtrunA17_Chr6g0454391 62.500 64 24 0 372 435 11 74 2.67e-21 89.4
Msa0419970 MtrunA17_Chr3g0092031 32.121 165 103 5 290 448 6 167 4.26e-20 88.6
Msa0419970 MtrunA17_Chr8g0357361 30.542 203 130 6 225 424 59 253 1.66e-19 88.2
Msa0419970 MtrunA17_Chr4g0066141 35.714 140 75 3 354 478 211 350 2.93e-19 89.4
Msa0419970 MtrunA17_Chr4g0039881 23.385 449 294 17 23 456 2 415 3.46e-17 84.0
Msa0419970 MtrunA17_Chr2g0283041 23.391 466 296 22 13 456 7 433 4.91e-17 83.6
Msa0419970 MtrunA17_Chr2g0319761 24.249 466 293 18 13 456 8 435 1.20e-16 82.4
Msa0419970 MtrunA17_Chr4g0040691 22.764 492 314 15 6 473 1 450 2.98e-16 80.9
Msa0419970 MtrunA17_Chr7g0231631 24.380 242 160 7 248 478 29 258 5.49e-15 75.1
Msa0419970 MtrunA17_Chr4g0040711 26.866 201 131 5 226 423 209 396 6.93e-14 73.6
Msa0419970 MtrunA17_Chr7g0243731 45.588 68 36 1 356 422 6 73 1.03e-13 66.6
Msa0419970 MtrunA17_Chr5g0442501 25.424 354 197 16 10 341 2 310 2.30e-12 67.8
Msa0419970 MtrunA17_Chr7g0267931 64.103 39 13 1 16 53 23 61 2.34e-12 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0419970 AT1G22400.1 48.620 471 238 4 5 472 5 474 8.28e-171 490
Msa0419970 AT1G22360.1 48.707 464 236 1 9 470 6 469 9.64e-171 489
Msa0419970 AT1G22380.1 48.291 468 241 1 6 472 6 473 7.72e-170 488
Msa0419970 AT1G22340.1 46.680 482 255 2 1 480 1 482 1.35e-168 484
Msa0419970 AT1G22370.2 47.699 478 245 1 1 478 1 473 1.63e-165 476
Msa0419970 AT1G22360.2 47.198 464 231 2 9 470 6 457 1.24e-161 466
Msa0419970 AT1G78270.1 45.303 479 257 5 7 482 7 483 9.19e-154 447
Msa0419970 AT1G22370.1 48.000 300 156 0 179 478 4 303 4.04e-95 290
Msa0419970 AT3G46660.1 36.983 484 255 14 3 472 1 448 1.13e-81 261
Msa0419970 AT5G59590.1 35.729 473 249 13 10 468 7 438 1.80e-81 260
Msa0419970 AT3G46690.1 37.844 473 258 10 10 477 6 447 1.01e-80 258
Msa0419970 AT5G38010.1 35.430 477 267 13 10 477 7 451 5.22e-79 254
Msa0419970 AT5G59580.1 34.746 472 260 11 11 472 7 440 9.08e-79 253
Msa0419970 AT3G46650.1 35.307 473 240 11 11 472 8 425 1.30e-78 252
Msa0419970 AT3G46670.1 34.894 470 259 13 13 472 9 441 2.99e-77 249
Msa0419970 AT3G11340.1 33.404 470 274 11 11 476 7 441 2.03e-76 247
Msa0419970 AT5G38040.1 34.483 464 264 12 21 476 18 449 2.76e-76 246
Msa0419970 AT3G46700.1 34.310 478 263 11 10 477 6 442 4.12e-75 243
Msa0419970 AT3G46680.1 35.343 481 245 15 10 470 6 440 5.97e-75 243
Msa0419970 AT3G46720.1 36.059 477 252 13 9 476 5 437 1.53e-72 236
Msa0419970 AT2G36970.1 31.677 483 286 12 9 472 6 463 1.42e-71 235
Msa0419970 AT5G05900.1 31.423 471 282 9 13 476 8 444 3.53e-70 231
Msa0419970 AT5G05880.1 30.917 469 288 9 13 476 8 445 6.92e-70 230
Msa0419970 AT3G21560.1 29.522 481 303 11 12 477 11 470 1.18e-66 223
Msa0419970 AT5G05890.1 30.526 475 286 9 13 476 8 449 1.27e-65 219
Msa0419970 AT4G15490.1 30.061 489 284 13 9 472 4 459 3.00e-65 218
Msa0419970 AT3G02100.1 30.544 478 288 14 11 476 11 456 1.45e-63 214
Msa0419970 AT4G15500.1 30.785 484 282 14 9 472 5 455 1.73e-63 214
Msa0419970 AT5G05860.1 32.543 464 277 9 13 472 9 440 2.25e-63 213
Msa0419970 AT2G26480.1 32.347 473 279 12 10 476 5 442 1.03e-62 211
Msa0419970 AT1G05675.1 29.959 484 282 16 13 476 6 452 2.13e-62 210
Msa0419970 AT1G05680.1 30.444 473 275 14 13 468 6 441 3.32e-62 209
Msa0419970 AT5G05870.1 30.867 473 289 11 13 476 8 451 4.59e-62 209
Msa0419970 AT2G43840.2 30.621 467 275 16 13 468 7 435 6.91e-62 209
Msa0419970 AT3G55710.1 30.103 485 295 14 13 485 8 460 9.47e-62 209
Msa0419970 AT3G55700.1 31.070 486 283 15 13 484 8 455 2.91e-61 207
Msa0419970 AT2G43840.1 30.407 467 276 16 13 468 7 435 7.65e-61 206
Msa0419970 AT4G15480.1 30.126 478 291 15 13 472 19 471 7.80e-60 204
Msa0419970 AT2G31790.1 29.939 491 289 15 6 476 1 456 1.63e-59 202
Msa0419970 AT2G31750.1 28.970 466 295 12 11 468 6 443 3.53e-59 202
Msa0419970 AT2G31750.2 28.970 466 295 12 11 468 6 443 6.02e-59 202
Msa0419970 AT2G28080.1 31.330 466 278 14 17 468 22 459 8.69e-59 201
Msa0419970 AT4G14090.1 31.276 486 274 16 1 468 1 444 1.17e-57 197
Msa0419970 AT2G43820.1 29.237 472 281 15 10 468 4 435 2.50e-57 197
Msa0419970 AT2G23260.1 28.247 485 299 18 7 478 4 452 1.58e-53 187
Msa0419970 AT2G30140.2 29.873 472 278 15 9 468 9 439 2.52e-53 186
Msa0419970 AT4G01070.1 29.412 493 275 15 9 468 4 456 1.32e-52 185
Msa0419970 AT2G30140.1 29.873 472 279 15 9 468 9 440 1.88e-52 184
Msa0419970 AT1G05560.1 28.279 488 288 17 12 478 4 450 1.12e-50 179
Msa0419970 AT4G15550.1 27.310 487 292 15 12 470 12 464 1.58e-50 179
Msa0419970 AT1G05560.2 28.571 490 284 18 12 478 54 500 1.97e-50 180
Msa0419970 AT1G24100.1 28.543 501 272 18 11 476 9 458 2.48e-50 178
Msa0419970 AT2G23250.1 29.247 465 284 16 22 478 7 434 3.76e-50 177
Msa0419970 AT2G30150.2 28.750 480 287 14 13 478 13 451 7.81e-49 174
Msa0419970 AT2G15480.1 28.287 502 300 16 9 478 6 479 1.19e-48 174
Msa0419970 AT4G34131.1 28.257 499 301 12 10 478 7 478 2.69e-48 173
Msa0419970 AT1G01420.2 29.730 481 282 17 12 468 10 458 5.60e-48 172
Msa0419970 AT1G01420.1 29.730 481 282 17 12 468 7 455 6.05e-48 172
Msa0419970 AT1G01390.2 30.200 500 292 19 2 476 14 481 6.62e-48 172
Msa0419970 AT1G01390.1 30.444 496 288 19 6 476 1 464 9.03e-48 172
Msa0419970 AT5G17050.1 27.101 476 309 11 9 476 8 453 1.40e-47 171
Msa0419970 AT5G37950.2 33.422 374 210 9 28 398 1 338 4.16e-47 167
Msa0419970 AT5G37950.1 33.422 374 216 10 28 398 1 344 5.23e-47 166
Msa0419970 AT1G05530.1 27.088 491 299 18 11 480 3 455 8.96e-47 169
Msa0419970 AT4G36770.1 29.400 483 266 20 13 461 4 445 1.11e-46 168
Msa0419970 AT2G15490.3 27.565 497 308 14 10 478 4 476 1.19e-46 169
Msa0419970 AT5G66690.1 28.094 509 278 19 11 478 5 466 1.69e-46 168
Msa0419970 AT2G30150.1 28.361 476 286 14 17 478 1 435 2.16e-46 167
Msa0419970 AT2G15480.2 27.756 508 305 17 9 478 6 489 2.25e-46 168
Msa0419970 AT1G30530.1 26.695 472 306 13 13 478 12 449 3.54e-46 167
Msa0419970 AT2G15490.1 27.600 500 307 15 10 478 4 479 6.51e-46 167
Msa0419970 AT2G36770.1 27.381 504 298 17 13 478 14 487 3.72e-45 165
Msa0419970 AT5G26310.1 28.070 513 273 20 11 478 5 466 2.01e-44 163
Msa0419970 AT3G22250.1 26.439 469 295 13 6 452 1 441 4.62e-44 161
Msa0419970 AT2G36750.1 29.550 511 287 18 13 483 10 487 1.92e-43 160
Msa0419970 AT2G36800.1 28.094 509 311 18 2 478 1 486 2.56e-43 160
Msa0419970 AT3G50740.1 28.684 509 287 20 11 481 5 475 4.03e-43 159
Msa0419970 AT2G36780.1 27.038 503 301 15 13 478 14 487 1.92e-42 157
Msa0419970 AT3G21790.1 25.301 498 320 10 11 478 2 477 2.15e-41 155
Msa0419970 AT3G53160.1 27.699 491 313 15 13 478 8 481 5.10e-41 154
Msa0419970 AT5G03490.1 28.953 487 289 18 9 478 15 461 1.39e-40 152
Msa0419970 AT2G36790.1 28.261 506 305 18 13 485 13 493 1.58e-40 152
Msa0419970 AT2G36760.1 27.944 501 299 17 13 478 14 487 1.70e-40 152
Msa0419970 AT5G17040.1 24.947 473 309 11 13 478 5 438 2.08e-40 151
Msa0419970 AT4G34135.1 27.255 499 311 14 8 478 6 480 1.55e-39 149
Msa0419970 AT3G16520.3 31.300 377 212 13 119 478 112 458 1.68e-39 149
Msa0419970 AT3G53150.1 26.207 435 291 10 1 422 10 427 4.72e-39 149
Msa0419970 AT2G16890.2 27.621 496 291 20 13 478 9 466 7.33e-39 147
Msa0419970 AT5G17040.2 28.852 305 201 4 177 479 47 337 8.06e-39 144
Msa0419970 AT3G21780.1 26.600 500 303 18 11 479 2 468 1.69e-38 146
Msa0419970 AT2G29730.1 25.205 488 312 14 14 479 6 462 1.99e-38 146
Msa0419970 AT5G17030.1 27.095 358 240 6 123 478 116 454 2.08e-38 145
Msa0419970 AT2G29740.1 27.495 491 302 16 6 469 1 464 2.40e-38 146
Msa0419970 AT3G21750.1 25.646 503 302 17 11 478 2 467 5.19e-38 145
Msa0419970 AT2G29750.1 27.309 498 297 18 13 478 8 472 1.12e-37 144
Msa0419970 AT3G16520.1 31.638 354 195 13 119 455 112 435 1.34e-37 143
Msa0419970 AT3G16520.2 31.638 354 195 13 119 455 112 435 1.43e-37 143
Msa0419970 AT3G21800.1 25.391 512 294 15 14 479 6 475 1.86e-37 144
Msa0419970 AT4G15280.1 24.303 502 315 14 11 478 2 472 7.11e-37 142
Msa0419970 AT4G15280.2 24.254 503 316 14 11 479 34 505 1.17e-36 142
Msa0419970 AT5G49690.1 28.913 460 264 19 13 451 10 427 1.85e-36 140
Msa0419970 AT1G07260.1 27.218 496 300 19 13 478 6 470 1.97e-36 140
Msa0419970 AT4G15260.1 27.614 373 219 10 133 479 7 354 1.98e-36 138
Msa0419970 AT3G21760.1 23.904 502 326 15 11 479 2 480 3.70e-36 140
Msa0419970 AT1G07250.1 24.145 497 333 14 10 482 3 479 5.27e-36 139
Msa0419970 AT2G29710.1 24.646 495 314 14 10 479 2 462 6.80e-36 139
Msa0419970 AT2G18560.1 33.910 289 145 10 215 477 106 374 7.47e-36 137
Msa0419970 AT1G10400.1 27.475 495 296 21 10 478 4 461 1.23e-35 138
Msa0419970 AT2G18570.1 24.706 510 299 16 11 480 3 467 1.94e-35 137
Msa0419970 AT1G51210.1 26.652 454 286 16 9 453 16 431 2.13e-35 137
Msa0419970 AT4G34138.1 25.852 499 309 13 11 478 9 477 2.53e-35 137
Msa0419970 AT5G14860.1 26.863 510 300 19 6 478 1 474 2.71e-35 137
Msa0419970 AT1G07240.1 24.646 495 317 17 14 478 6 474 6.16e-34 134
Msa0419970 AT5G65550.1 26.230 488 307 12 11 478 7 461 6.56e-34 133
Msa0419970 AT2G16890.3 26.949 449 261 19 13 432 9 419 5.03e-31 124
Msa0419970 AT5G12890.1 26.613 496 311 17 13 479 10 481 6.02e-30 122
Msa0419970 AT1G73880.1 25.887 479 307 18 11 472 12 459 9.53e-30 122
Msa0419970 AT4G27570.1 25.780 481 293 19 11 473 5 439 4.69e-26 110
Msa0419970 AT2G22590.1 26.237 465 292 16 11 455 13 446 1.95e-25 109
Msa0419970 AT4G27560.1 24.074 486 306 18 11 478 5 445 2.93e-23 102
Msa0419970 AT5G53990.1 25.339 442 265 15 10 439 3 391 6.46e-23 101
Msa0419970 AT5G54010.1 24.481 482 275 16 11 460 4 428 2.50e-21 97.1
Msa0419970 AT1G64910.1 24.283 453 256 16 10 439 3 391 8.77e-21 95.1
Msa0419970 AT4G09500.2 23.984 492 283 20 11 473 4 433 1.13e-18 88.6
Msa0419970 AT1G06000.1 26.217 267 175 7 226 478 174 432 1.31e-17 85.5
Msa0419970 AT4G01070.2 24.269 342 203 9 9 334 4 305 1.00e-16 82.0
Msa0419970 AT1G50580.1 24.066 482 296 18 11 473 4 434 1.32e-16 82.4
Msa0419970 AT3G29630.1 24.686 478 300 20 11 473 4 436 1.51e-16 82.4
Msa0419970 AT2G22930.1 22.642 477 276 18 13 458 6 420 6.84e-16 80.1
Msa0419970 AT4G09500.1 23.625 491 261 19 11 473 4 408 8.20e-16 79.7
Msa0419970 AT4G34135.2 25.291 344 217 11 8 334 6 326 1.82e-15 77.8
Msa0419970 AT3G29630.2 30.102 196 120 7 290 473 220 410 1.95e-15 78.6
Msa0419970 AT1G64920.1 23.663 486 298 19 10 473 3 437 1.58e-14 76.3
Msa0419970 AT5G54060.1 23.861 461 300 16 14 455 14 442 2.27e-14 75.5

Find 126 sgRNAs with CRISPR-Local

Find 215 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCATATGATGTGGATTATT+TGG 0.090631 3_2:-68186118 Msa0419970:three_prime_UTR
ATTGTATATGTTGGGATTTA+TGG 0.179673 3_2:+68186914 None:intergenic
AATCCAATGGTTCAAGTCTT+TGG 0.180859 3_2:-68186836 Msa0419970:CDS
ATGATTTAACATGTATTAAA+TGG 0.195899 3_2:-68186809 Msa0419970:CDS
ATTGGTCCACTTCAATTTCT+AGG 0.222113 3_2:-68186891 Msa0419970:CDS
TATTATATATGATGGACTTA+TGG 0.231044 3_2:-68188661 Msa0419970:CDS
AAATAGACACCTCGTGTTAA+TGG 0.237232 3_2:+68185717 None:intergenic
TGCTTCTGCTTGTGGGTTGA+TGG 0.247881 3_2:-68188583 Msa0419970:CDS
GCATTGCAGAGCAACAATTT+TGG 0.256872 3_2:-68188608 Msa0419970:CDS
GGGAATAGGGATGGATATTA+AGG 0.258230 3_2:-68186409 Msa0419970:CDS
TTAATTATTTCCACAAATAA+TGG 0.263464 3_2:-68186084 Msa0419970:three_prime_UTR
CTTCTTACAATGATTTCTTT+AGG 0.272275 3_2:-68186257 Msa0419970:CDS
ATTATATATGATGGACTTAT+GGG 0.292263 3_2:-68188660 Msa0419970:CDS
TACATATCTTGTAAGAAATA+TGG 0.312981 3_2:-68189045 Msa0419970:exon
TCAGTCATATATATTAATTA+TGG 0.326230 3_2:-68186765 Msa0419970:CDS
ATAAGCACAACTTGGGGAAT+AGG 0.336581 3_2:-68186423 Msa0419970:CDS
TGAAGTCCTTGATGCTCTTA+TGG 0.341242 3_2:-68186937 Msa0419970:CDS
TGTAGATGTTGCAAAGGATT+TGG 0.350911 3_2:-68188631 Msa0419970:CDS
TCATTTGTTGTATGATGTAT+TGG 0.351580 3_2:-68185881 Msa0419970:three_prime_UTR
CTGAGCAACAAACAAATTGT+AGG 0.353752 3_2:-68186449 Msa0419970:CDS
ATAGCTTAGCTCAGTTGATA+TGG 0.354988 3_2:+68185752 None:intergenic
TCCAAATAATCCACATCATA+TGG 0.356034 3_2:+68186117 None:intergenic
GTGGATAAATAGGCCAGATT+TGG 0.356652 3_2:-68186667 Msa0419970:CDS
TGGGTTGTATTTCTAATTAG+AGG 0.367014 3_2:-68185982 Msa0419970:three_prime_UTR
TTTGGACTGCTTCTGCTTGT+GGG 0.371703 3_2:-68188590 Msa0419970:CDS
TTCCTGGGGTCCATTCTAGA+TGG 0.378864 3_2:+68187105 None:intergenic
GTCTAGCATCTTTAATGATA+AGG 0.385839 3_2:-68186155 Msa0419970:three_prime_UTR
TGCATAATATATGCAAGATC+CGG 0.387800 3_2:+68185779 None:intergenic
TTAGATGAAGTTAAGGATAG+AGG 0.388988 3_2:-68186609 Msa0419970:CDS
CATTTGTTGTATGATGTATT+GGG 0.395202 3_2:-68185880 Msa0419970:three_prime_UTR
AAACGTTTGGTAAAATCTCT+TGG 0.402346 3_2:-68188873 Msa0419970:CDS
AATCCCAACATATACAATAT+TGG 0.404252 3_2:-68186909 Msa0419970:CDS
CATTGTTCACAAAGGTTATG+TGG 0.406840 3_2:+68188907 None:intergenic
TGTGGAAACCAAGTTTGTTA+AGG 0.407262 3_2:+68188925 None:intergenic
TAAGCACAACTTGGGGAATA+GGG 0.409390 3_2:-68186422 Msa0419970:CDS
TCTGAAGGCAAGCCTATGAT+TGG 0.412688 3_2:-68186486 Msa0419970:CDS
GTAGATGTTGCAAAGGATTT+GGG 0.413935 3_2:-68188630 Msa0419970:CDS
GAAATGATCAAGGGTGAAAA+GGG 0.414223 3_2:-68186348 Msa0419970:CDS
ATAGTCTCAAACCTAAAATC+TGG 0.420330 3_2:+68188828 None:intergenic
GAAGGAAATATTGTATGATT+TGG 0.421628 3_2:+68189085 None:intergenic
ATTATTTGTTCCATTATTTG+TGG 0.427733 3_2:+68186074 None:intergenic
GCTAAAATCCTTAACAAACT+TGG 0.430793 3_2:-68188933 Msa0419970:CDS
TGAATTCAACCACAAACGTT+TGG 0.432420 3_2:-68188886 Msa0419970:CDS
TGTGGTGTAAATGTTCCTAT+TGG 0.433199 3_2:-68185918 Msa0419970:three_prime_UTR
GGACCAATATTGTATATGTT+GGG 0.434560 3_2:+68186906 None:intergenic
GGAAATGATCAAGGGTGAAA+AGG 0.440308 3_2:-68186349 Msa0419970:CDS
TTCTCCACAAGCTCTTTCAA+TGG 0.441645 3_2:+68188720 None:intergenic
GTGGACTTGTTGAAGGTTGT+AGG 0.441801 3_2:-68188758 Msa0419970:CDS
AAGAAAGGCCAACCAATCAT+AGG 0.443607 3_2:+68186474 None:intergenic
CATGCACGGGTTACAATAGT+TGG 0.443881 3_2:+68185847 None:intergenic
ATCAAACTATAACCTTTGTA+TGG 0.448179 3_2:+68188519 None:intergenic
ACGTGACCTTGTGCTGGAAA+TGG 0.448261 3_2:+68188975 None:intergenic
TGGTCGCCGGGTTCGAACCC+CGG 0.449146 3_2:-68185798 Msa0419970:three_prime_UTR
ATATGCCACAACAAACCAAT+AGG 0.451510 3_2:+68185903 None:intergenic
TATTAAATGGTTAGACCAAT+GGG 0.452336 3_2:-68186796 Msa0419970:CDS
TCTGATGGTGGCAAACCATC+TGG 0.452997 3_2:+68188804 None:intergenic
GCTTCTGCTTGTGGGTTGAT+GGG 0.456161 3_2:-68188582 Msa0419970:CDS
TGATTTCTTTAGGTTACTAA+AGG 0.462123 3_2:-68186247 Msa0419970:CDS
TTATATTACTGATGGCTCCT+TGG 0.462933 3_2:-68187132 Msa0419970:CDS
TGGACCAATATTGTATATGT+TGG 0.466893 3_2:+68186905 None:intergenic
CTGATGGATGTGCAAGTACT+TGG 0.468722 3_2:+68186559 None:intergenic
GGTTGTAGGAAACATTGTTA+TGG 0.470472 3_2:-68188744 Msa0419970:CDS
GTTTGTTGCTCAGCAAAGAA+AGG 0.473094 3_2:+68186459 None:intergenic
AGCTTGGAAGGTCTCTCATT+CGG 0.477688 3_2:+68187072 None:intergenic
CCTTGGATGTCCATCTAGAA+TGG 0.491985 3_2:-68187115 Msa0419970:CDS
GGGTTTACGTGACCTTGTGC+TGG 0.492068 3_2:+68188969 None:intergenic
TGTGCAAGTACTTGGCTTTG+AGG 0.492657 3_2:+68186567 None:intergenic
GTGGTTGTTCTAACAAAGCT+TGG 0.493929 3_2:+68187056 None:intergenic
GTTACATCTATTATATATGA+TGG 0.494268 3_2:-68188669 Msa0419970:CDS
CAAGATCCGGGGTTCGAACC+CGG 0.496064 3_2:+68185792 None:intergenic
TAAATAGGCCAGATTTGGTA+AGG 0.496694 3_2:-68186662 Msa0419970:CDS
TTAATATATATGACTGAAGA+AGG 0.500769 3_2:+68186771 None:intergenic
AACTATTGTAACCCGTGCAT+GGG 0.507051 3_2:-68185845 Msa0419970:three_prime_UTR
GCATAATATATGCAAGATCC+GGG 0.508019 3_2:+68185780 None:intergenic
ATAATATATGTCTTCTACAA+AGG 0.510249 3_2:-68186056 Msa0419970:three_prime_UTR
ATGTTCCTATTGGTTTGTTG+TGG 0.521054 3_2:-68185908 Msa0419970:three_prime_UTR
TAGGTATATAAGCACAACTT+GGG 0.523212 3_2:-68186430 Msa0419970:CDS
TTTCCAAAGACTTGAACCAT+TGG 0.524666 3_2:+68186833 None:intergenic
GATGAAAGTTATATTACTGA+TGG 0.537450 3_2:-68187140 Msa0419970:CDS
GTCCATCTAGAATGGACCCC+AGG 0.543365 3_2:-68187107 Msa0419970:CDS
AAAACTGATTTCATCTAATG+TGG 0.543689 3_2:+68187037 None:intergenic
AATGCTACACAAAGCATTGG+TGG 0.546367 3_2:-68188777 Msa0419970:CDS
AGCATTGGTGGACTTGTTGA+AGG 0.546579 3_2:-68188765 Msa0419970:CDS
GTATTAAATGGTTAGACCAA+TGG 0.546865 3_2:-68186797 Msa0419970:CDS
TGGTCCATTGAAAGAGCTTG+TGG 0.547074 3_2:-68188724 Msa0419970:CDS
CAACTATTGTAACCCGTGCA+TGG 0.549802 3_2:-68185846 Msa0419970:three_prime_UTR
GTAGTAGAAGCTGCTAAACC+AGG 0.552938 3_2:-68186285 Msa0419970:CDS
TTGTTCTAACAAAGCTTGGA+AGG 0.553738 3_2:+68187060 None:intergenic
AAGGCAAGCCTATGATTGGT+TGG 0.558177 3_2:-68186482 Msa0419970:CDS
GAAAATGGGTTCAAATCCAA+TGG 0.558954 3_2:-68186849 Msa0419970:CDS
ACTTGTGAAGGAAATGATCA+AGG 0.563405 3_2:-68186358 Msa0419970:CDS
CGAAATATGCTTCCATACAA+AGG 0.564341 3_2:-68188531 Msa0419970:intron
GAAAATGCTACACAAAGCAT+TGG 0.567187 3_2:-68188780 Msa0419970:CDS
CACAACTTGGGGAATAGGGA+TGG 0.568850 3_2:-68186418 Msa0419970:CDS
ATAGAGGTTATATAATAACT+TGG 0.570343 3_2:-68186593 Msa0419970:CDS
GGATGATGTGAAAAGAGAAG+AGG 0.572156 3_2:-68186388 Msa0419970:CDS
TGTGTAATTTGTGTTATGTG+TGG 0.574084 3_2:-68185936 Msa0419970:three_prime_UTR
AGAGGTAACTGAACTTGTGA+AGG 0.575445 3_2:-68186370 Msa0419970:CDS
ATGATAATTAAGTATAGTGA+AGG 0.584074 3_2:+68189067 None:intergenic
ATCTTCACAAACCCATGCAC+GGG 0.584575 3_2:+68185834 None:intergenic
AATAGGCCAGATTTGGTAAG+GGG 0.586310 3_2:-68186660 Msa0419970:CDS
GTTGAATTCATTGTTCACAA+AGG 0.589156 3_2:+68188899 None:intergenic
TTGTCACCTAGAAATTGAAG+TGG 0.589563 3_2:+68186885 None:intergenic
GATCTTCACAAACCCATGCA+CGG 0.591107 3_2:+68185833 None:intergenic
AACTGAGCTAAGCTATCGAT+AGG 0.591883 3_2:-68185745 Msa0419970:three_prime_UTR
AAATAGGCCAGATTTGGTAA+GGG 0.595936 3_2:-68186661 Msa0419970:CDS
TCACTTGAGAGTATTTCTGA+AGG 0.601389 3_2:-68186501 Msa0419970:CDS
GTAGGTATATAAGCACAACT+TGG 0.603550 3_2:-68186431 Msa0419970:CDS
TGTGTACCATTTCCAGCACA+AGG 0.607339 3_2:-68188981 Msa0419970:CDS
AGGTTTGAGACTATACCAGA+TGG 0.615743 3_2:-68188819 Msa0419970:CDS
TGACTGAAGAAGGTTCCCAT+TGG 0.625034 3_2:+68186781 None:intergenic
GTACTTGCACATCCATCAGT+TGG 0.627733 3_2:-68186555 Msa0419970:CDS
CTTGTGAAGGAAATGATCAA+GGG 0.633603 3_2:-68186357 Msa0419970:CDS
ATTTGCTGTAGATGTTGCAA+AGG 0.636876 3_2:-68188637 Msa0419970:CDS
AAATGATCAAGGGTGAAAAG+GGG 0.646708 3_2:-68186347 Msa0419970:CDS
ATATGCTTCTCCATATGATG+TGG 0.646721 3_2:-68186127 Msa0419970:three_prime_UTR
ATATCTTGTAAGAAATATGG+TGG 0.651465 3_2:-68189042 Msa0419970:exon
CCATTCTAGATGGACATCCA+AGG 0.651684 3_2:+68187115 None:intergenic
TCATTGTAAGAAGAACCTCC+TGG 0.656049 3_2:+68186267 None:intergenic
AATGGTACACAAACTACATG+AGG 0.663412 3_2:+68188993 None:intergenic
TTATGGCCATAAGAGCATCA+AGG 0.671838 3_2:+68186931 None:intergenic
AGGTATATAAGCACAACTTG+GGG 0.681367 3_2:-68186429 Msa0419970:CDS
GTAGAAGCTGCTAAACCAGG+AGG 0.695811 3_2:-68186282 Msa0419970:CDS
CATAATATATGCAAGATCCG+GGG 0.700063 3_2:+68185781 None:intergenic
TATATAATAGATGTAACGTG+AGG 0.700082 3_2:+68188675 None:intergenic
TAGGAAGATCCATTAACACG+AGG 0.761870 3_2:-68185726 Msa0419970:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTATTATCATTATTCA+TGG + chr3_2:68186757-68186776 None:intergenic 10.0%
!!! TTTAATAAATTATACTTTTC+TGG - chr3_2:68187373-68187392 Msa0419970:intron 10.0%
!! TAAATTTCAATTCAAATTAT+TGG + chr3_2:68187492-68187511 None:intergenic 10.0%
!! AATAATTTGAATTGAAATTT+AGG - chr3_2:68187491-68187510 Msa0419970:intron 10.0%
!! ATAATTTGAATTGAAATTTA+GGG - chr3_2:68187492-68187511 Msa0419970:intron 10.0%
!!! AATCATTTTTTAATCATAAT+TGG + chr3_2:68187597-68187616 None:intergenic 10.0%
!!! ACTATTTTAATTTTCTTTTG+AGG - chr3_2:68186464-68186483 Msa0419970:CDS 15.0%
!!! ATCAATCTTTTTCTAATTTT+TGG + chr3_2:68186642-68186661 None:intergenic 15.0%
!!! TTAAGAATTTTTGTTTTTGT+TGG + chr3_2:68186731-68186750 None:intergenic 15.0%
!! ATAAAAATAAATATCAAGTG+TGG - chr3_2:68186769-68186788 Msa0419970:CDS 15.0%
!! TTAACGATAAAAAAAGTAAA+AGG + chr3_2:68187047-68187066 None:intergenic 15.0%
!!! TGAATTAATTCGATTTTTTA+TGG - chr3_2:68187143-68187162 Msa0419970:intron 15.0%
!! TTGATAGAAATAAGTAAAAT+TGG + chr3_2:68187279-68187298 None:intergenic 15.0%
!! ATGATTTAACATGTATTAAA+TGG - chr3_2:68187995-68188014 Msa0419970:intron 15.0%
!! TCAGTCATATATATTAATTA+TGG - chr3_2:68188039-68188058 Msa0419970:intron 15.0%
!! TTAATTATTTCCACAAATAA+TGG - chr3_2:68188720-68188739 Msa0419970:CDS 15.0%
!!! TTTTCTTCATTATTTATCAA+GGG + chr3_2:68188782-68188801 None:intergenic 15.0%
!!! TTTTTCTTCATTATTTATCA+AGG + chr3_2:68188783-68188802 None:intergenic 15.0%
!! ATGATAATTAAGTATAGTGA+AGG + chr3_2:68185740-68185759 None:intergenic 20.0%
!! TACATATCTTGTAAGAAATA+TGG - chr3_2:68185759-68185778 Msa0419970:three_prime_UTR 20.0%
!! GTTACATCTATTATATATGA+TGG - chr3_2:68186135-68186154 Msa0419970:three_prime_UTR 20.0%
!!! TATTATATATGATGGACTTA+TGG - chr3_2:68186143-68186162 Msa0419970:three_prime_UTR 20.0%
!!! ATTATATATGATGGACTTAT+GGG - chr3_2:68186144-68186163 Msa0419970:three_prime_UTR 20.0%
!!! ATTTTAGGAACTAAATTAAC+AGG - chr3_2:68186402-68186421 Msa0419970:CDS 20.0%
!!! TTTCAATTTAGTCTTTGAAA+CGG + chr3_2:68186547-68186566 None:intergenic 20.0%
!!! AAACTGAACTCTTTTAAATA+AGG - chr3_2:68186675-68186694 Msa0419970:CDS 20.0%
!!! TCTTTTTTAATAACTTCTGA+TGG + chr3_2:68186823-68186842 None:intergenic 20.0%
!!! AGTAAAATTGGTTTAACATA+AGG + chr3_2:68187267-68187286 None:intergenic 20.0%
!! TGAAAGTGAAAAATCAATAT+TGG + chr3_2:68187409-68187428 None:intergenic 20.0%
!! TTAATATATATGACTGAAGA+AGG + chr3_2:68188036-68188055 None:intergenic 20.0%
!!! AACATTTTAATGAATTTGCT+TGG - chr3_2:68188085-68188104 Msa0419970:intron 20.0%
!!! ACATTTTAATGAATTTGCTT+GGG - chr3_2:68188086-68188105 Msa0419970:intron 20.0%
!!! ATAGTAAATTACCATTTTTG+TGG - chr3_2:68188118-68188137 Msa0419970:intron 20.0%
!!! AGAATTTTTAGATGAAGTTA+AGG - chr3_2:68188188-68188207 Msa0419970:intron 20.0%
!! ATAGAGGTTATATAATAACT+TGG - chr3_2:68188211-68188230 Msa0419970:intron 20.0%
!! ATTATTTGTTCCATTATTTG+TGG + chr3_2:68188733-68188752 None:intergenic 20.0%
!! ATAATATATGTCTTCTACAA+AGG - chr3_2:68188748-68188767 Msa0419970:CDS 20.0%
!! AAAAAAGACATGTGATTTAT+TGG - chr3_2:68188802-68188821 Msa0419970:CDS 20.0%
!! AAAAAGACATGTGATTTATT+GGG - chr3_2:68188803-68188822 Msa0419970:CDS 20.0%
! GAAGGAAATATTGTATGATT+TGG + chr3_2:68185722-68185741 None:intergenic 25.0%
! ATATCTTGTAAGAAATATGG+TGG - chr3_2:68185762-68185781 Msa0419970:three_prime_UTR 25.0%
!!! TTTTAGCTAATTGCATGAAA+GGG + chr3_2:68185858-68185877 None:intergenic 25.0%
!!! ATTTTAGCTAATTGCATGAA+AGG + chr3_2:68185859-68185878 None:intergenic 25.0%
! TATATAATAGATGTAACGTG+AGG + chr3_2:68186132-68186151 None:intergenic 25.0%
! ATCAAACTATAACCTTTGTA+TGG + chr3_2:68186288-68186307 None:intergenic 25.0%
! TACTAAAAATTGAGACATGT+AGG - chr3_2:68186327-68186346 Msa0419970:CDS 25.0%
!! TTTGAAAATTTTCACTCACA+TGG - chr3_2:68186365-68186384 Msa0419970:CDS 25.0%
!! GATGCTTAACAAACAATTTT+AGG - chr3_2:68186387-68186406 Msa0419970:CDS 25.0%
! ATGATTCTAATACTAACTCA+TGG - chr3_2:68186514-68186533 Msa0419970:CDS 25.0%
! TAAATAAGGCTATCAATCAT+TGG - chr3_2:68186689-68186708 Msa0419970:CDS 25.0%
!!! AAAAGCATTCGTAAATTAGA+TGG + chr3_2:68187083-68187102 None:intergenic 25.0%
!! ATCAGATTTTACTTATCTCT+TGG - chr3_2:68187178-68187197 Msa0419970:intron 25.0%
!! TTTCTATCAAGAAAAAGTGT+TGG - chr3_2:68187289-68187308 Msa0419970:intron 25.0%
!!! TAGGGCAAATTTTTTTCAAT+TGG - chr3_2:68187510-68187529 Msa0419970:intron 25.0%
! GAACTTATAATCAGATAAAG+AGG - chr3_2:68187532-68187551 Msa0419970:intron 25.0%
! GATGAAAGTTATATTACTGA+TGG - chr3_2:68187664-68187683 Msa0419970:intron 25.0%
!! AAAACTGATTTCATCTAATG+TGG + chr3_2:68187770-68187789 None:intergenic 25.0%
!!! TTAGATGAAATCAGTTTTGT+TGG - chr3_2:68187772-68187791 Msa0419970:intron 25.0%
! ATTGTATATGTTGGGATTTA+TGG + chr3_2:68187893-68187912 None:intergenic 25.0%
! AATCCCAACATATACAATAT+TGG - chr3_2:68187895-68187914 Msa0419970:intron 25.0%
!! AATTTTCCTGAAAAGGAAAA+TGG - chr3_2:68187940-68187959 Msa0419970:intron 25.0%
!! ATTTTCCTGAAAAGGAAAAT+GGG - chr3_2:68187941-68187960 Msa0419970:intron 25.0%
! TATTAAATGGTTAGACCAAT+GGG - chr3_2:68188008-68188027 Msa0419970:intron 25.0%
!!! CATTTTAATGAATTTGCTTG+GGG - chr3_2:68188087-68188106 Msa0419970:intron 25.0%
!!! ATTTTAATGAATTTGCTTGG+GGG - chr3_2:68188088-68188107 Msa0419970:intron 25.0%
!!! TACCATTTTTGTGGATAAAT+AGG - chr3_2:68188127-68188146 Msa0419970:intron 25.0%
! TCTAAAAATTCTTGTGACAA+TGG + chr3_2:68188180-68188199 None:intergenic 25.0%
! CTTCTTACAATGATTTCTTT+AGG - chr3_2:68188547-68188566 Msa0419970:CDS 25.0%
!! TGATTTCTTTAGGTTACTAA+AGG - chr3_2:68188557-68188576 Msa0419970:CDS 25.0%
!!! TCATTTGTTGTATGATGTAT+TGG - chr3_2:68188923-68188942 Msa0419970:CDS 25.0%
!!! CATTTGTTGTATGATGTATT+GGG - chr3_2:68188924-68188943 Msa0419970:CDS 25.0%
!!! TGAAGATCCTTTTTTTTTTG+TGG - chr3_2:68188986-68189005 Msa0419970:CDS 25.0%
GCTAAAATCCTTAACAAACT+TGG - chr3_2:68185871-68185890 Msa0419970:three_prime_UTR 30.0%
GTTGAATTCATTGTTCACAA+AGG + chr3_2:68185908-68185927 None:intergenic 30.0%
AAACGTTTGGTAAAATCTCT+TGG - chr3_2:68185931-68185950 Msa0419970:three_prime_UTR 30.0%
! TCTTGGACATGACTTTTTAA+AGG - chr3_2:68185948-68185967 Msa0419970:three_prime_UTR 30.0%
! CTTGGACATGACTTTTTAAA+GGG - chr3_2:68185949-68185968 Msa0419970:three_prime_UTR 30.0%
ATAGTCTCAAACCTAAAATC+TGG + chr3_2:68185979-68185998 None:intergenic 30.0%
ACATGTAGGTAATTAGTTCA+TGG - chr3_2:68186341-68186360 Msa0419970:CDS 30.0%
TTTGTTGGAAGATTCAGAAT+AGG + chr3_2:68186716-68186735 None:intergenic 30.0%
TGTGAAGAATACTGTTCAAT+AGG + chr3_2:68186935-68186954 None:intergenic 30.0%
TCTTCACAAAAAATCTATCC+AGG - chr3_2:68186947-68186966 Msa0419970:CDS 30.0%
CTTCACAAAAAATCTATCCA+GGG - chr3_2:68186948-68186967 Msa0419970:CDS 30.0%
AATTTAAACATATGTGACCC+TGG + chr3_2:68186968-68186987 None:intergenic 30.0%
AATGACTATTTATTACCCTC+TGG + chr3_2:68187242-68187261 None:intergenic 30.0%
!! AAAAGTGTTGGTGTAATTGA+TGG - chr3_2:68187301-68187320 Msa0419970:intron 30.0%
! TTCGGATATTTTTCATTCCT+GGG + chr3_2:68187717-68187736 None:intergenic 30.0%
! ATTCGGATATTTTTCATTCC+TGG + chr3_2:68187718-68187737 None:intergenic 30.0%
!!! GAAATCAGTTTTGTTGGTTT+TGG - chr3_2:68187778-68187797 Msa0419970:intron 30.0%
GGACCAATATTGTATATGTT+GGG + chr3_2:68187901-68187920 None:intergenic 30.0%
TGGACCAATATTGTATATGT+TGG + chr3_2:68187902-68187921 None:intergenic 30.0%
GTATTAAATGGTTAGACCAA+TGG - chr3_2:68188007-68188026 Msa0419970:intron 30.0%
AAAAATTCTTGTGACAATGG+AGG + chr3_2:68188177-68188196 None:intergenic 30.0%
TTAGATGAAGTTAAGGATAG+AGG - chr3_2:68188195-68188214 Msa0419970:intron 30.0%
!! CATTTTTAACTCATTGTGGT+TGG - chr3_2:68188274-68188293 Msa0419970:intron 30.0%
TAGGTATATAAGCACAACTT+GGG - chr3_2:68188374-68188393 Msa0419970:intron 30.0%
TGAGAGAAAAATGTGTTGAA+TGG - chr3_2:68188487-68188506 Msa0419970:intron 30.0%
GTCTAGCATCTTTAATGATA+AGG - chr3_2:68188649-68188668 Msa0419970:CDS 30.0%
! TCCATATGATGTGGATTATT+TGG - chr3_2:68188686-68188705 Msa0419970:CDS 30.0%
TCCAAATAATCCACATCATA+TGG + chr3_2:68188690-68188709 None:intergenic 30.0%
! TGGGTTGTATTTCTAATTAG+AGG - chr3_2:68188822-68188841 Msa0419970:CDS 30.0%
! TGTGTAATTTGTGTTATGTG+TGG - chr3_2:68188868-68188887 Msa0419970:CDS 30.0%
TGCATAATATATGCAAGATC+CGG + chr3_2:68189028-68189047 None:intergenic 30.0%
AATGGTACACAAACTACATG+AGG + chr3_2:68185814-68185833 None:intergenic 35.0%
!! TGTGGAAACCAAGTTTGTTA+AGG + chr3_2:68185882-68185901 None:intergenic 35.0%
CATTGTTCACAAAGGTTATG+TGG + chr3_2:68185900-68185919 None:intergenic 35.0%
TGAATTCAACCACAAACGTT+TGG - chr3_2:68185918-68185937 Msa0419970:three_prime_UTR 35.0%
! GAGATTTTACCAAACGTTTG+TGG + chr3_2:68185930-68185949 None:intergenic 35.0%
! TAAAGGGTCAACCAGATTTT+AGG - chr3_2:68185965-68185984 Msa0419970:three_prime_UTR 35.0%
! TGTGTAGCATTTTCATCTGA+TGG + chr3_2:68186018-68186037 None:intergenic 35.0%
GAAAATGCTACACAAAGCAT+TGG - chr3_2:68186024-68186043 Msa0419970:three_prime_UTR 35.0%
GGTTGTAGGAAACATTGTTA+TGG - chr3_2:68186060-68186079 Msa0419970:three_prime_UTR 35.0%
!! ATTTGCTGTAGATGTTGCAA+AGG - chr3_2:68186167-68186186 Msa0419970:three_prime_UTR 35.0%
TGTAGATGTTGCAAAGGATT+TGG - chr3_2:68186173-68186192 Msa0419970:three_prime_UTR 35.0%
GTAGATGTTGCAAAGGATTT+GGG - chr3_2:68186174-68186193 Msa0419970:three_prime_UTR 35.0%
CGAAATATGCTTCCATACAA+AGG - chr3_2:68186273-68186292 Msa0419970:CDS 35.0%
TCTCCATAGTTATATGTGCT+TGG - chr3_2:68186857-68186876 Msa0419970:CDS 35.0%
ACTCCAAGCACATATAACTA+TGG + chr3_2:68186863-68186882 None:intergenic 35.0%
TTATTACCCTCTGGATTCTA+AGG + chr3_2:68187233-68187252 None:intergenic 35.0%
TTATATTACTGATGGCTCCT+TGG - chr3_2:68187672-68187691 Msa0419970:intron 35.0%
! TCGGATATTTTTCATTCCTG+GGG + chr3_2:68187716-68187735 None:intergenic 35.0%
TTGTTCTAACAAAGCTTGGA+AGG + chr3_2:68187747-68187766 None:intergenic 35.0%
ATTGGTCCACTTCAATTTCT+AGG - chr3_2:68187913-68187932 Msa0419970:intron 35.0%
TTGTCACCTAGAAATTGAAG+TGG + chr3_2:68187922-68187941 None:intergenic 35.0%
! AGGTGACAATTTTCCTGAAA+AGG - chr3_2:68187933-68187952 Msa0419970:intron 35.0%
! TTGAACCCATTTTCCTTTTC+AGG + chr3_2:68187949-68187968 None:intergenic 35.0%
! GAAAATGGGTTCAAATCCAA+TGG - chr3_2:68187955-68187974 Msa0419970:intron 35.0%
AATCCAATGGTTCAAGTCTT+TGG - chr3_2:68187968-68187987 Msa0419970:intron 35.0%
TTTCCAAAGACTTGAACCAT+TGG + chr3_2:68187974-68187993 None:intergenic 35.0%
GGCCTATTTATCCACAAAAA+TGG + chr3_2:68188132-68188151 None:intergenic 35.0%
! TAAATAGGCCAGATTTGGTA+AGG - chr3_2:68188142-68188161 Msa0419970:intron 35.0%
! AAATAGGCCAGATTTGGTAA+GGG - chr3_2:68188143-68188162 Msa0419970:intron 35.0%
GTTAAAAATGCACCAACTGA+TGG + chr3_2:68188264-68188283 None:intergenic 35.0%
!! GGTGCATTTTTAACTCATTG+TGG - chr3_2:68188270-68188289 Msa0419970:intron 35.0%
!! TCACTTGAGAGTATTTCTGA+AGG - chr3_2:68188303-68188322 Msa0419970:intron 35.0%
CTGAGCAACAAACAAATTGT+AGG - chr3_2:68188355-68188374 Msa0419970:intron 35.0%
GTAGGTATATAAGCACAACT+TGG - chr3_2:68188373-68188392 Msa0419970:intron 35.0%
AGGTATATAAGCACAACTTG+GGG - chr3_2:68188375-68188394 Msa0419970:intron 35.0%
ACTTGTGAAGGAAATGATCA+AGG - chr3_2:68188446-68188465 Msa0419970:intron 35.0%
CTTGTGAAGGAAATGATCAA+GGG - chr3_2:68188447-68188466 Msa0419970:intron 35.0%
GAAATGATCAAGGGTGAAAA+GGG - chr3_2:68188456-68188475 Msa0419970:intron 35.0%
AAATGATCAAGGGTGAAAAG+GGG - chr3_2:68188457-68188476 Msa0419970:intron 35.0%
ATATGCTTCTCCATATGATG+TGG - chr3_2:68188677-68188696 Msa0419970:CDS 35.0%
TGTGGTGTAAATGTTCCTAT+TGG - chr3_2:68188886-68188905 Msa0419970:CDS 35.0%
!! ATGTTCCTATTGGTTTGTTG+TGG - chr3_2:68188896-68188915 Msa0419970:CDS 35.0%
ATATGCCACAACAAACCAAT+AGG + chr3_2:68188904-68188923 None:intergenic 35.0%
CATAATATATGCAAGATCCG+GGG + chr3_2:68189026-68189045 None:intergenic 35.0%
GCATAATATATGCAAGATCC+GGG + chr3_2:68189027-68189046 None:intergenic 35.0%
! ATAGCTTAGCTCAGTTGATA+TGG + chr3_2:68189055-68189074 None:intergenic 35.0%
AAATAGACACCTCGTGTTAA+TGG + chr3_2:68189090-68189109 None:intergenic 35.0%
! AGGTTTGAGACTATACCAGA+TGG - chr3_2:68185985-68186004 Msa0419970:three_prime_UTR 40.0%
! GTAGCATTTTCATCTGATGG+TGG + chr3_2:68186015-68186034 None:intergenic 40.0%
!! AATGCTACACAAAGCATTGG+TGG - chr3_2:68186027-68186046 Msa0419970:three_prime_UTR 40.0%
TTCTCCACAAGCTCTTTCAA+TGG + chr3_2:68186087-68186106 None:intergenic 40.0%
! GCATTGCAGAGCAACAATTT+TGG - chr3_2:68186196-68186215 Msa0419970:three_prime_UTR 40.0%
GTGGTTGTTCTAACAAAGCT+TGG + chr3_2:68187751-68187770 None:intergenic 40.0%
!!! CAGTTTTGTTGGTTTTGGCT+TGG - chr3_2:68187783-68187802 Msa0419970:intron 40.0%
TGAAGTCCTTGATGCTCTTA+TGG - chr3_2:68187867-68187886 Msa0419970:intron 40.0%
!! TTATGGCCATAAGAGCATCA+AGG + chr3_2:68187876-68187895 None:intergenic 40.0%
GTGGATAAATAGGCCAGATT+TGG - chr3_2:68188137-68188156 Msa0419970:intron 40.0%
! AATAGGCCAGATTTGGTAAG+GGG - chr3_2:68188144-68188163 Msa0419970:intron 40.0%
! GATTTTCCCCTTACCAAATC+TGG + chr3_2:68188153-68188172 None:intergenic 40.0%
AAGAAAGGCCAACCAATCAT+AGG + chr3_2:68188333-68188352 None:intergenic 40.0%
! GTTTGTTGCTCAGCAAAGAA+AGG + chr3_2:68188348-68188367 None:intergenic 40.0%
ATAAGCACAACTTGGGGAAT+AGG - chr3_2:68188381-68188400 Msa0419970:intron 40.0%
TAAGCACAACTTGGGGAATA+GGG - chr3_2:68188382-68188401 Msa0419970:intron 40.0%
GGGAATAGGGATGGATATTA+AGG - chr3_2:68188395-68188414 Msa0419970:intron 40.0%
GGATGATGTGAAAAGAGAAG+AGG - chr3_2:68188416-68188435 Msa0419970:intron 40.0%
AGAGGTAACTGAACTTGTGA+AGG - chr3_2:68188434-68188453 Msa0419970:intron 40.0%
GGAAATGATCAAGGGTGAAA+AGG - chr3_2:68188455-68188474 Msa0419970:intron 40.0%
TCATTGTAAGAAGAACCTCC+TGG + chr3_2:68188540-68188559 None:intergenic 40.0%
AACTATTGTAACCCGTGCAT+GGG - chr3_2:68188959-68188978 Msa0419970:CDS 40.0%
!!! CCTTTTTTTTTTGTGGTCGC+CGG - chr3_2:68188993-68189012 Msa0419970:CDS 40.0%
!!! CTTTTTTTTTTGTGGTCGCC+GGG - chr3_2:68188994-68189013 Msa0419970:CDS 40.0%
AACTGAGCTAAGCTATCGAT+AGG - chr3_2:68189059-68189078 Msa0419970:five_prime_UTR 40.0%
TAGGAAGATCCATTAACACG+AGG - chr3_2:68189078-68189097 Msa0419970:five_prime_UTR 40.0%
TGTGTACCATTTCCAGCACA+AGG - chr3_2:68185823-68185842 Msa0419970:three_prime_UTR 45.0%
!! AGCATTGGTGGACTTGTTGA+AGG - chr3_2:68186039-68186058 Msa0419970:three_prime_UTR 45.0%
!! GTGGACTTGTTGAAGGTTGT+AGG - chr3_2:68186046-68186065 Msa0419970:three_prime_UTR 45.0%
TGGTCCATTGAAAGAGCTTG+TGG - chr3_2:68186080-68186099 Msa0419970:three_prime_UTR 45.0%
! TTTTGGACTGCTTCTGCTTG+TGG - chr3_2:68186213-68186232 Msa0419970:exon 45.0%
TTTGGACTGCTTCTGCTTGT+GGG - chr3_2:68186214-68186233 Msa0419970:exon 45.0%
CAACACGATGACTTCACAAG+AGG + chr3_2:68186910-68186929 None:intergenic 45.0%
! CCTCTGGATTCTAAGGAAAG+GGG + chr3_2:68187226-68187245 None:intergenic 45.0%
! CCCTCTGGATTCTAAGGAAA+GGG + chr3_2:68187227-68187246 None:intergenic 45.0%
CCCTTTCCTTAGAATCCAGA+GGG - chr3_2:68187224-68187243 Msa0419970:intron 45.0%
! ACCCTCTGGATTCTAAGGAA+AGG + chr3_2:68187228-68187247 None:intergenic 45.0%
CCATTCTAGATGGACATCCA+AGG + chr3_2:68187692-68187711 None:intergenic 45.0%
CCTTGGATGTCCATCTAGAA+TGG - chr3_2:68187689-68187708 Msa0419970:intron 45.0%
AGCTTGGAAGGTCTCTCATT+CGG + chr3_2:68187735-68187754 None:intergenic 45.0%
TGACTGAAGAAGGTTCCCAT+TGG + chr3_2:68188026-68188045 None:intergenic 45.0%
!! TGTGCAAGTACTTGGCTTTG+AGG + chr3_2:68188240-68188259 None:intergenic 45.0%
! CTGATGGATGTGCAAGTACT+TGG + chr3_2:68188248-68188267 None:intergenic 45.0%
GTACTTGCACATCCATCAGT+TGG - chr3_2:68188249-68188268 Msa0419970:intron 45.0%
TCTGAAGGCAAGCCTATGAT+TGG - chr3_2:68188318-68188337 Msa0419970:intron 45.0%
AAGGCAAGCCTATGATTGGT+TGG - chr3_2:68188322-68188341 Msa0419970:intron 45.0%
GTAGTAGAAGCTGCTAAACC+AGG - chr3_2:68188519-68188538 Msa0419970:intron 45.0%
! CATGCACGGGTTACAATAGT+TGG + chr3_2:68188960-68188979 None:intergenic 45.0%
CAACTATTGTAACCCGTGCA+TGG - chr3_2:68188958-68188977 Msa0419970:CDS 45.0%
ATCTTCACAAACCCATGCAC+GGG + chr3_2:68188973-68188992 None:intergenic 45.0%
GATCTTCACAAACCCATGCA+CGG + chr3_2:68188974-68188993 None:intergenic 45.0%
CCGGCGACCACAAAAAAAAA+AGG + chr3_2:68188996-68189015 None:intergenic 45.0%
!! TTTAAATTTATTTATTATTC+TGG - chr3_2:68186980-68186999 Msa0419970:CDS 5.0%
ACGTGACCTTGTGCTGGAAA+TGG + chr3_2:68185832-68185851 None:intergenic 50.0%
!! TCTGATGGTGGCAAACCATC+TGG + chr3_2:68186003-68186022 None:intergenic 50.0%
! TGCTTCTGCTTGTGGGTTGA+TGG - chr3_2:68186221-68186240 Msa0419970:CDS 50.0%
!! GCTTCTGCTTGTGGGTTGAT+GGG - chr3_2:68186222-68186241 Msa0419970:CDS 50.0%
CCCCTTTCCTTAGAATCCAG+AGG - chr3_2:68187223-68187242 Msa0419970:intron 50.0%
TTCCTGGGGTCCATTCTAGA+TGG + chr3_2:68187702-68187721 None:intergenic 50.0%
CACAACTTGGGGAATAGGGA+TGG - chr3_2:68188386-68188405 Msa0419970:intron 50.0%
GTAGAAGCTGCTAAACCAGG+AGG - chr3_2:68188522-68188541 Msa0419970:intron 50.0%
GGGTTTACGTGACCTTGTGC+TGG + chr3_2:68185838-68185857 None:intergenic 55.0%
! GTCCATCTAGAATGGACCCC+AGG - chr3_2:68187697-68187716 Msa0419970:intron 55.0%
CAAGATCCGGGGTTCGAACC+CGG + chr3_2:68189015-68189034 None:intergenic 60.0%
TGGTCGCCGGGTTCGAACCC+CGG - chr3_2:68189006-68189025 Msa0419970:CDS 70.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 68185711 68189115 68185711 ID=Msa0419970;Name=Msa0419970
chr3_2 mRNA 68185711 68189115 68185711 ID=Msa0419970-mRNA-1;Parent=Msa0419970;Name=Msa0419970-mRNA-1;_AED=0.03;_eAED=0.03;_QI=67|1|1|1|1|1|2|507|486
chr3_2 exon 68185711 68187161 68185711 ID=Msa0419970-mRNA-1:exon:16015;Parent=Msa0419970-mRNA-1
chr3_2 exon 68188532 68189115 68188532 ID=Msa0419970-mRNA-1:exon:16014;Parent=Msa0419970-mRNA-1
chr3_2 five_prime_UTR 68189049 68189115 68189049 ID=Msa0419970-mRNA-1:five_prime_utr;Parent=Msa0419970-mRNA-1
chr3_2 CDS 68188532 68189048 68188532 ID=Msa0419970-mRNA-1:cds;Parent=Msa0419970-mRNA-1
chr3_2 CDS 68186218 68187161 68186218 ID=Msa0419970-mRNA-1:cds;Parent=Msa0419970-mRNA-1
chr3_2 three_prime_UTR 68185711 68186217 68185711 ID=Msa0419970-mRNA-1:three_prime_utr;Parent=Msa0419970-mRNA-1
Gene Sequence

>Msa0419970

ATGGTGGTGTCAGTGTTGTCATACTCACAAAAGCCTCATGTAGTTTGTGTACCATTTCCAGCACAAGGTCACGTAAACCCTTTCATGCAATTAGCTAAAATCCTTAACAAACTTGGTTTCCACATAACCTTTGTGAACAATGAATTCAACCACAAACGTTTGGTAAAATCTCTTGGACATGACTTTTTAAAGGGTCAACCAGATTTTAGGTTTGAGACTATACCAGATGGTTTGCCACCATCAGATGAAAATGCTACACAAAGCATTGGTGGACTTGTTGAAGGTTGTAGGAAACATTGTTATGGTCCATTGAAAGAGCTTGTGGAGAATCTTAACAATTCTTCAGAAGTTCCTCACGTTACATCTATTATATATGATGGACTTATGGGATTTGCTGTAGATGTTGCAAAGGATTTGGGCATTGCAGAGCAACAATTTTGGACTGCTTCTGCTTGTGGGTTGATGGGATATTTGCAATTTGATGAGCTTATCAAACGAAATATGCTTCCATACAAAGATGAAAGTTATATTACTGATGGCTCCTTGGATGTCCATCTAGAATGGACCCCAGGAATGAAAAATATCCGAATGAGAGACCTTCCAAGCTTTGTTAGAACAACCACATTAGATGAAATCAGTTTTGTTGGTTTTGGCTTGGAAGCTCAACAATGTATGAAATCATCAGCAATCATAATTAACACAGTCAAAGAATTAGAAAGTGAAGTCCTTGATGCTCTTATGGCCATAAATCCCAACATATACAATATTGGTCCACTTCAATTTCTAGGTGACAATTTTCCTGAAAAGGAAAATGGGTTCAAATCCAATGGTTCAAGTCTTTGGAAAAATGATTTAACATGTATTAAATGGTTAGACCAATGGGAACCTTCTTCAGTCATATATATTAATTATGGAAGTATAGCTGTGATGAGTGAGAAACATTTTAATGAATTTGCTTGGGGGTTAGCAAATAGTAAATTACCATTTTTGTGGATAAATAGGCCAGATTTGGTAAGGGGAAAATCTCCTCCATTGTCACAAGAATTTTTAGATGAAGTTAAGGATAGAGGTTATATAATAACTTGGTGTCCTCAAAGCCAAGTACTTGCACATCCATCAGTTGGTGCATTTTTAACTCATTGTGGTTGGAATTCATCACTTGAGAGTATTTCTGAAGGCAAGCCTATGATTGGTTGGCCTTTCTTTGCTGAGCAACAAACAAATTGTAGGTATATAAGCACAACTTGGGGAATAGGGATGGATATTAAGGATGATGTGAAAAGAGAAGAGGTAACTGAACTTGTGAAGGAAATGATCAAGGGTGAAAAGGGGAAGAAAATGAGAGAAAAATGTGTTGAATGGAAAAAGAAAGTAGTAGAAGCTGCTAAACCAGGAGGTTCTTCTTACAATGATTTCTTTAGGTTACTAAAGGATGCTTATCATTGTGATGCTAGTGTTTGA

Protein sequence

>Msa0419970

MVVSVLSYSQKPHVVCVPFPAQGHVNPFMQLAKILNKLGFHITFVNNEFNHKRLVKSLGHDFLKGQPDFRFETIPDGLPPSDENATQSIGGLVEGCRKHCYGPLKELVENLNNSSEVPHVTSIIYDGLMGFAVDVAKDLGIAEQQFWTASACGLMGYLQFDELIKRNMLPYKDESYITDGSLDVHLEWTPGMKNIRMRDLPSFVRTTTLDEISFVGFGLEAQQCMKSSAIIINTVKELESEVLDALMAINPNIYNIGPLQFLGDNFPEKENGFKSNGSSLWKNDLTCIKWLDQWEPSSVIYINYGSIAVMSEKHFNEFAWGLANSKLPFLWINRPDLVRGKSPPLSQEFLDEVKDRGYIITWCPQSQVLAHPSVGAFLTHCGWNSSLESISEGKPMIGWPFFAEQQTNCRYISTTWGIGMDIKDDVKREEVTELVKEMIKGEKGKKMREKCVEWKKKVVEAAKPGGSSYNDFFRLLKDAYHCDASV*