Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0098440 | XP_003589026.1 | 97.175 | 531 | 8 | 1 | 1 | 531 | 1 | 524 | 0.0 | 1063 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0098440 | sp|P48731|ATH1_ARATH | 54.674 | 353 | 134 | 8 | 155 | 505 | 118 | 446 | 8.58e-111 | 340 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0098440 | G7IB93 | 97.175 | 531 | 8 | 1 | 1 | 531 | 1 | 524 | 0.0 | 1063 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0098440 | TF | HB-BELL |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002930 | Msa0098440 | 0.839766 | 1.302240e-57 | -8.615850e-47 |
| Msa0004360 | Msa0098440 | 0.842140 | 3.101043e-58 | -8.615850e-47 |
| Msa0005050 | Msa0098440 | 0.935127 | 1.380507e-96 | -8.615850e-47 |
| Msa0010560 | Msa0098440 | 0.800153 | 1.647067e-48 | -8.615850e-47 |
| Msa0012440 | Msa0098440 | 0.825054 | 5.776049e-54 | -8.615850e-47 |
| Msa0016120 | Msa0098440 | 0.845306 | 4.408389e-59 | -8.615850e-47 |
| Msa0022640 | Msa0098440 | 0.818610 | 1.791824e-52 | -8.615850e-47 |
| Msa0024680 | Msa0098440 | 0.801668 | 8.076330e-49 | -8.615850e-47 |
| Msa0032840 | Msa0098440 | -0.817265 | 3.607731e-52 | -8.615850e-47 |
| Msa0036430 | Msa0098440 | 0.856979 | 2.229601e-62 | -8.615850e-47 |
| Msa0043210 | Msa0098440 | 0.808960 | 2.395324e-50 | -8.615850e-47 |
| Msa0044020 | Msa0098440 | 0.817711 | 2.861882e-52 | -8.615850e-47 |
| Msa0048200 | Msa0098440 | 0.812321 | 4.495626e-51 | -8.615850e-47 |
| Msa0050040 | Msa0098440 | 0.874748 | 5.300322e-68 | -8.615850e-47 |
| Msa0053110 | Msa0098440 | 0.945075 | 6.010334e-104 | -8.615850e-47 |
| Msa0057240 | Msa0098440 | 0.822649 | 2.115974e-53 | -8.615850e-47 |
| Msa0072810 | Msa0098440 | 0.848755 | 5.006252e-60 | -8.615850e-47 |
| Msa0073670 | Msa0098440 | 0.813987 | 1.937353e-51 | -8.615850e-47 |
| Msa0083920 | Msa0098440 | 0.820772 | 5.747671e-53 | -8.615850e-47 |
| Msa0084500 | Msa0098440 | 0.860625 | 1.813379e-63 | -8.615850e-47 |
| Msa0090590 | Msa0098440 | 0.820978 | 5.153660e-53 | -8.615850e-47 |
| Msa0097050 | Msa0098440 | 0.802272 | 6.070411e-49 | -8.615850e-47 |
| Msa0098440 | Msa0101300 | 0.800097 | 1.691109e-48 | -8.615850e-47 |
| Msa0098440 | Msa0102990 | 0.875096 | 4.034382e-68 | -8.615850e-47 |
| Msa0098440 | Msa0103000 | 0.847025 | 1.500913e-59 | -8.615850e-47 |
| Msa0098440 | Msa0106790 | 0.828416 | 9.101629e-55 | -8.615850e-47 |
| Msa0098440 | Msa0109880 | 0.821843 | 3.255456e-53 | -8.615850e-47 |
| Msa0098440 | Msa0109950 | 0.800932 | 1.142676e-48 | -8.615850e-47 |
| Msa0098440 | Msa0110970 | 0.827960 | 1.172149e-54 | -8.615850e-47 |
| Msa0098440 | Msa0114540 | -0.810170 | 1.316740e-50 | -8.615850e-47 |
| Msa0098440 | Msa0118380 | 0.805606 | 1.230951e-49 | -8.615850e-47 |
| Msa0098440 | Msa0118400 | 0.836703 | 8.012979e-57 | -8.615850e-47 |
| Msa0098440 | Msa0124340 | 0.816394 | 5.655750e-52 | -8.615850e-47 |
| Msa0098440 | Msa0130010 | 0.815206 | 1.041235e-51 | -8.615850e-47 |
| Msa0098440 | Msa0130570 | 0.842120 | 3.140092e-58 | -8.615850e-47 |
| Msa0098440 | Msa0132010 | 0.801085 | 1.063298e-48 | -8.615850e-47 |
| Msa0098440 | Msa0134130 | 0.851423 | 8.964350e-61 | -8.615850e-47 |
| Msa0098440 | Msa0137150 | 0.814035 | 1.891265e-51 | -8.615850e-47 |
| Msa0098440 | Msa0139900 | 0.803770 | 2.974202e-49 | -8.615850e-47 |
| Msa0098440 | Msa0141600 | 0.852670 | 3.962779e-61 | -8.615850e-47 |
| Msa0098440 | Msa0147560 | 0.857530 | 1.533491e-62 | -8.615850e-47 |
| Msa0098440 | Msa0147600 | 0.812345 | 4.442338e-51 | -8.615850e-47 |
| Msa0098440 | Msa0149560 | 0.822121 | 2.806651e-53 | -8.615850e-47 |
| Msa0098440 | Msa0153420 | 0.841053 | 5.997766e-58 | -8.615850e-47 |
| Msa0098440 | Msa0161680 | 0.823419 | 1.399037e-53 | -8.615850e-47 |
| Msa0098440 | Msa0169570 | 0.817071 | 3.988124e-52 | -8.615850e-47 |
| Msa0098440 | Msa0172350 | 0.816893 | 4.373249e-52 | -8.615850e-47 |
| Msa0098440 | Msa0176470 | 0.841274 | 5.247155e-58 | -8.615850e-47 |
| Msa0098440 | Msa0183830 | 0.818856 | 1.575364e-52 | -8.615850e-47 |
| Msa0098440 | Msa0186890 | 0.801533 | 8.610717e-49 | -8.615850e-47 |
| Msa0098440 | Msa0197930 | 0.818520 | 1.877656e-52 | -8.615850e-47 |
| Msa0098440 | Msa0203030 | 0.832489 | 9.182913e-56 | -8.615850e-47 |
| Msa0098440 | Msa0203160 | 0.849812 | 2.543113e-60 | -8.615850e-47 |
| Msa0098440 | Msa0219190 | 0.881950 | 1.566922e-70 | -8.615850e-47 |
| Msa0098440 | Msa0219310 | 0.826911 | 2.092330e-54 | -8.615850e-47 |
| Msa0098440 | Msa0230550 | -0.813739 | 2.198129e-51 | -8.615850e-47 |
| Msa0098440 | Msa0238890 | 0.811425 | 7.047484e-51 | -8.615850e-47 |
| Msa0098440 | Msa0239570 | 0.813541 | 2.430060e-51 | -8.615850e-47 |
| Msa0098440 | Msa0257680 | 0.834890 | 2.307552e-56 | -8.615850e-47 |
| Msa0098440 | Msa0258940 | 0.809306 | 2.019558e-50 | -8.615850e-47 |
| Msa0098440 | Msa0262560 | 0.826134 | 3.204646e-54 | -8.615850e-47 |
| Msa0098440 | Msa0262930 | 0.816015 | 6.876062e-52 | -8.615850e-47 |
| Msa0098440 | Msa0267760 | 0.814521 | 1.477181e-51 | -8.615850e-47 |
| Msa0098440 | Msa0298240 | 0.880887 | 3.790259e-70 | -8.615850e-47 |
| Msa0098440 | Msa0300620 | 0.803914 | 2.776409e-49 | -8.615850e-47 |
| Msa0098440 | Msa0306120 | 0.812327 | 4.481969e-51 | -8.615850e-47 |
| Msa0098440 | Msa0308830 | 0.810520 | 1.106560e-50 | -8.615850e-47 |
| Msa0098440 | Msa0315990 | 0.808201 | 3.480006e-50 | -8.615850e-47 |
| Msa0098440 | Msa0317280 | 0.814161 | 1.773576e-51 | -8.615850e-47 |
| Msa0098440 | Msa0322830 | 0.811971 | 5.360304e-51 | -8.615850e-47 |
| Msa0098440 | Msa0322840 | 0.817612 | 3.012944e-52 | -8.615850e-47 |
| Msa0098440 | Msa0323610 | 0.816100 | 6.582340e-52 | -8.615850e-47 |
| Msa0098440 | Msa0329620 | 0.807079 | 6.022779e-50 | -8.615850e-47 |
| Msa0098440 | Msa0335270 | 0.830234 | 3.294637e-55 | -8.615850e-47 |
| Msa0098440 | Msa0336090 | 0.816159 | 6.384907e-52 | -8.615850e-47 |
| Msa0098440 | Msa0337850 | 0.846127 | 2.639126e-59 | -8.615850e-47 |
| Msa0098440 | Msa0359250 | 0.820112 | 8.148587e-53 | -8.615850e-47 |
| Msa0098440 | Msa0361260 | 0.822318 | 2.526018e-53 | -8.615850e-47 |
| Msa0098440 | Msa0362780 | 0.819390 | 1.191212e-52 | -8.615850e-47 |
| Msa0098440 | Msa0369570 | 0.802525 | 5.384298e-49 | -8.615850e-47 |
| Msa0098440 | Msa0370600 | 0.857921 | 1.173916e-62 | -8.615850e-47 |
| Msa0098440 | Msa0371540 | 0.819112 | 1.377941e-52 | -8.615850e-47 |
| Msa0098440 | Msa0378500 | 0.814360 | 1.602970e-51 | -8.615850e-47 |
| Msa0098440 | Msa0382010 | 0.804431 | 2.167075e-49 | -8.615850e-47 |
| Msa0098440 | Msa0402820 | 0.821431 | 4.053526e-53 | -8.615850e-47 |
| Msa0098440 | Msa0408630 | 0.810971 | 8.839665e-51 | -8.615850e-47 |
| Msa0098440 | Msa0408640 | 0.819162 | 1.342350e-52 | -8.615850e-47 |
| Msa0098440 | Msa0413930 | 0.847652 | 1.009883e-59 | -8.615850e-47 |
| Msa0098440 | Msa0418200 | 0.870144 | 1.821439e-66 | -8.615850e-47 |
| Msa0098440 | Msa0419820 | 0.815943 | 7.133763e-52 | -8.615850e-47 |
| Msa0098440 | Msa0436280 | -0.807391 | 5.173215e-50 | -8.615850e-47 |
| Msa0098440 | Msa0436460 | 0.849516 | 3.074934e-60 | -8.615850e-47 |
| Msa0098440 | Msa0436500 | 0.877129 | 8.048901e-69 | -8.615850e-47 |
| Msa0098440 | Msa0444010 | 0.813925 | 1.999751e-51 | -8.615850e-47 |
| Msa0098440 | Msa0451400 | 0.814396 | 1.573608e-51 | -8.615850e-47 |
| Msa0098440 | Msa0453520 | 0.821353 | 4.224037e-53 | -8.615850e-47 |
| Msa0098440 | Msa0458950 | 0.805482 | 1.306589e-49 | -8.615850e-47 |
| Msa0098440 | Msa0464540 | 0.871662 | 5.762092e-67 | -8.615850e-47 |
| Msa0098440 | Msa0466060 | 0.802009 | 6.873181e-49 | -8.615850e-47 |
| Msa0098440 | Msa0503580 | 0.814664 | 1.372852e-51 | -8.615850e-47 |
| Msa0098440 | Msa0517340 | 0.813255 | 2.807458e-51 | -8.615850e-47 |
| Msa0098440 | Msa0517390 | 0.826295 | 2.933353e-54 | -8.615850e-47 |
| Msa0098440 | Msa0520510 | 0.806096 | 9.708708e-50 | -8.615850e-47 |
| Msa0098440 | Msa0526710 | 0.808986 | 2.364991e-50 | -8.615850e-47 |
| Msa0098440 | Msa0527550 | 0.801111 | 1.050573e-48 | -8.615850e-47 |
| Msa0098440 | Msa0537920 | 0.865160 | 7.223072e-65 | -8.615850e-47 |
| Msa0098440 | Msa0538060 | 0.803863 | 2.845446e-49 | -8.615850e-47 |
| Msa0098440 | Msa0538220 | 0.860244 | 2.364777e-63 | -8.615850e-47 |
| Msa0098440 | Msa0538570 | 0.802947 | 4.405763e-49 | -8.615850e-47 |
| Msa0098440 | Msa0541860 | 0.800903 | 1.158201e-48 | -8.615850e-47 |
| Msa0098440 | Msa0543850 | 0.829170 | 5.980722e-55 | -8.615850e-47 |
| Msa0098440 | Msa0555910 | 0.820654 | 6.119182e-53 | -8.615850e-47 |
| Msa0098440 | Msa0561510 | 0.805535 | 1.273895e-49 | -8.615850e-47 |
| Msa0098440 | Msa0571080 | 0.809374 | 1.953306e-50 | -8.615850e-47 |
| Msa0098440 | Msa0585730 | 0.815755 | 7.857569e-52 | -8.615850e-47 |
| Msa0098440 | Msa0590800 | 0.805813 | 1.113480e-49 | -8.615850e-47 |
| Msa0098440 | Msa0593710 | 0.804395 | 2.205149e-49 | -8.615850e-47 |
| Msa0098440 | Msa0594090 | 0.807355 | 5.264098e-50 | -8.615850e-47 |
| Msa0098440 | Msa0594390 | 0.820109 | 8.160860e-53 | -8.615850e-47 |
| Msa0098440 | Msa0601110 | 0.810752 | 9.859192e-51 | -8.615850e-47 |
| Msa0098440 | Msa0601120 | 0.804758 | 1.852634e-49 | -8.615850e-47 |
| Msa0098440 | Msa0609450 | 0.801782 | 7.655241e-49 | -8.615850e-47 |
| Msa0098440 | Msa0619980 | 0.828531 | 8.537622e-55 | -8.615850e-47 |
| Msa0098440 | Msa0620240 | 0.828314 | 9.630663e-55 | -8.615850e-47 |
| Msa0098440 | Msa0620260 | 0.804493 | 2.104004e-49 | -8.615850e-47 |
| Msa0098440 | Msa0625890 | 0.825384 | 4.826200e-54 | -8.615850e-47 |
| Msa0098440 | Msa0631120 | 0.819314 | 1.239690e-52 | -8.615850e-47 |
| Msa0098440 | Msa0633750 | 0.805297 | 1.428549e-49 | -8.615850e-47 |
| Msa0098440 | Msa0641250 | 0.842554 | 2.409283e-58 | -8.615850e-47 |
| Msa0098440 | Msa0641620 | 0.816647 | 4.965924e-52 | -8.615850e-47 |
| Msa0098440 | Msa0642650 | 0.802398 | 5.716917e-49 | -8.615850e-47 |
| Msa0098440 | Msa0645050 | 0.800193 | 1.616244e-48 | -8.615850e-47 |
| Msa0098440 | Msa0645930 | 0.800751 | 1.244518e-48 | -8.615850e-47 |
| Msa0098440 | Msa0647380 | 0.813692 | 2.250696e-51 | -8.615850e-47 |
| Msa0098440 | Msa0650090 | 0.810359 | 1.199032e-50 | -8.615850e-47 |
| Msa0098440 | Msa0663590 | 0.816813 | 4.557582e-52 | -8.615850e-47 |
| Msa0098440 | Msa0663680 | 0.831056 | 2.072306e-55 | -8.615850e-47 |
| Msa0098440 | Msa0666210 | 0.803612 | 3.207968e-49 | -8.615850e-47 |
| Msa0098440 | Msa0669840 | 0.823723 | 1.187641e-53 | -8.615850e-47 |
| Msa0098440 | Msa0672110 | 0.840646 | 7.669477e-58 | -8.615850e-47 |
| Msa0098440 | Msa0678890 | 0.831934 | 1.259572e-55 | -8.615850e-47 |
| Msa0098440 | Msa0680150 | 0.845815 | 3.208769e-59 | -8.615850e-47 |
| Msa0098440 | Msa0685330 | 0.826678 | 2.377917e-54 | -8.615850e-47 |
| Msa0098440 | Msa0688500 | 0.864155 | 1.490036e-64 | -8.615850e-47 |
| Msa0098440 | Msa0691160 | 0.832030 | 1.192590e-55 | -8.615850e-47 |
| Msa0098440 | Msa0692080 | 0.819780 | 9.703294e-53 | -8.615850e-47 |
| Msa0098440 | Msa0703230 | 0.801523 | 8.650351e-49 | -8.615850e-47 |
| Msa0098440 | Msa0706370 | 0.803990 | 2.677691e-49 | -8.615850e-47 |
| Msa0098440 | Msa0707220 | 0.850325 | 1.826241e-60 | -8.615850e-47 |
| Msa0098440 | Msa0716450 | 0.800385 | 1.477608e-48 | -8.615850e-47 |
| Msa0098440 | Msa0716800 | 0.819544 | 1.098737e-52 | -8.615850e-47 |
| Msa0098440 | Msa0717260 | 0.829443 | 5.133088e-55 | -8.615850e-47 |
| Msa0098440 | Msa0720040 | 0.825280 | 5.108929e-54 | -8.615850e-47 |
| Msa0098440 | Msa0722940 | 0.802228 | 6.196085e-49 | -8.615850e-47 |
| Msa0098440 | Msa0723150 | 0.800495 | 1.403065e-48 | -8.615850e-47 |
| Msa0098440 | Msa0737190 | 0.807390 | 5.174934e-50 | -8.615850e-47 |
| Msa0098440 | Msa0739430 | 0.815914 | 7.240957e-52 | -8.615850e-47 |
| Msa0098440 | Msa0741900 | 0.825189 | 5.369629e-54 | -8.615850e-47 |
| Msa0098440 | Msa0747780 | 0.948918 | 3.623467e-107 | -8.615850e-47 |
| Msa0098440 | Msa0754030 | 0.816042 | 6.781694e-52 | -8.615850e-47 |
| Msa0098440 | Msa0757870 | 0.841156 | 5.637459e-58 | -8.615850e-47 |
| Msa0098440 | Msa0758320 | 0.806920 | 6.506298e-50 | -8.615850e-47 |
| Msa0098440 | Msa0761580 | 0.845846 | 3.147857e-59 | -8.615850e-47 |
| Msa0098440 | Msa0764820 | 0.814731 | 1.327145e-51 | -8.615850e-47 |
| Msa0098440 | Msa0770290 | 0.816421 | 5.579210e-52 | -8.615850e-47 |
| Msa0098440 | Msa0778930 | 0.803609 | 3.212028e-49 | -8.615850e-47 |
| Msa0098440 | Msa0799210 | 0.828299 | 9.709321e-55 | -8.615850e-47 |
| Msa0098440 | Msa0807110 | 0.819997 | 8.657150e-53 | -8.615850e-47 |
| Msa0098440 | Msa0810020 | 0.816538 | 5.251227e-52 | -8.615850e-47 |
| Msa0098440 | Msa0820670 | 0.810845 | 9.412047e-51 | -8.615850e-47 |
| Msa0098440 | Msa0822990 | 0.835628 | 1.501973e-56 | -8.615850e-47 |
| Msa0098440 | Msa0823400 | 0.814918 | 1.206038e-51 | -8.615850e-47 |
| Msa0098440 | Msa0833040 | 0.826918 | 2.084242e-54 | -8.615850e-47 |
| Msa0098440 | Msa0837440 | 0.819686 | 1.019659e-52 | -8.615850e-47 |
| Msa0098440 | Msa0840500 | 0.803696 | 3.082350e-49 | -8.615850e-47 |
| Msa0098440 | Msa0850500 | 0.802140 | 6.460555e-49 | -8.615850e-47 |
| Msa0098440 | Msa0853320 | 0.818854 | 1.577651e-52 | -8.615850e-47 |
| Msa0098440 | Msa0862100 | 0.849507 | 3.093647e-60 | -8.615850e-47 |
| Msa0098440 | Msa0863240 | 0.828951 | 6.755828e-55 | -8.615850e-47 |
| Msa0098440 | Msa0867350 | 0.876572 | 1.255629e-68 | -8.615850e-47 |
| Msa0098440 | Msa0872310 | 0.877388 | 6.540465e-69 | -8.615850e-47 |
| Msa0098440 | Msa0873190 | 0.857321 | 1.767888e-62 | -8.615850e-47 |
| Msa0098440 | Msa0880440 | 0.841906 | 3.576322e-58 | -8.615850e-47 |
| Msa0098440 | Msa0885060 | 0.874381 | 7.058597e-68 | -8.615850e-47 |
| Msa0098440 | Msa0898730 | 0.861217 | 1.197945e-63 | -8.615850e-47 |
| Msa0098440 | Msa0903330 | 0.805988 | 1.023401e-49 | -8.615850e-47 |
| Msa0098440 | Msa0905550 | 0.894753 | 1.833258e-75 | -8.615850e-47 |
| Msa0098440 | Msa0906370 | 0.831940 | 1.255145e-55 | -8.615850e-47 |
| Msa0098440 | Msa0911990 | 0.831560 | 1.557644e-55 | -8.615850e-47 |
| Msa0098440 | Msa0922750 | 0.802993 | 4.310459e-49 | -8.615850e-47 |
| Msa0098440 | Msa0929870 | 0.828924 | 6.859844e-55 | -8.615850e-47 |
| Msa0098440 | Msa0930780 | 0.808595 | 2.867033e-50 | -8.615850e-47 |
| Msa0098440 | Msa0931480 | 0.801263 | 9.777308e-49 | -8.615850e-47 |
| Msa0098440 | Msa0936410 | 0.811380 | 7.205822e-51 | -8.615850e-47 |
| Msa0098440 | Msa0937550 | 0.901153 | 3.573219e-78 | -8.615850e-47 |
| Msa0098440 | Msa0938430 | 0.839022 | 2.031454e-57 | -8.615850e-47 |
| Msa0098440 | Msa0940460 | 0.817146 | 3.836283e-52 | -8.615850e-47 |
| Msa0098440 | Msa0951460 | 0.819635 | 1.047271e-52 | -8.615850e-47 |
| Msa0098440 | Msa0951960 | 0.813675 | 2.270335e-51 | -8.615850e-47 |
| Msa0098440 | Msa0973250 | 0.807563 | 4.754858e-50 | -8.615850e-47 |
| Msa0098440 | Msa0974530 | 0.801950 | 7.069781e-49 | -8.615850e-47 |
| Msa0098440 | Msa0974750 | 0.863806 | 1.913155e-64 | -8.615850e-47 |
| Msa0098440 | Msa0975580 | 0.836809 | 7.526386e-57 | -8.615850e-47 |
| Msa0098440 | Msa0999300 | 0.816307 | 5.916772e-52 | -8.615850e-47 |
| Msa0098440 | Msa1004500 | 0.802491 | 5.469964e-49 | -8.615850e-47 |
| Msa0098440 | Msa1006830 | 0.809769 | 1.606086e-50 | -8.615850e-47 |
| Msa0098440 | Msa1007350 | 0.825626 | 4.231382e-54 | -8.615850e-47 |
| Msa0098440 | Msa1009000 | 0.802632 | 5.117093e-49 | -8.615850e-47 |
| Msa0098440 | Msa1012810 | 0.830492 | 2.848008e-55 | -8.615850e-47 |
| Msa0098440 | Msa1014270 | 0.849271 | 3.598476e-60 | -8.615850e-47 |
| Msa0098440 | Msa1018790 | 0.816292 | 5.962737e-52 | -8.615850e-47 |
| Msa0098440 | Msa1032450 | 0.833180 | 6.182563e-56 | -8.615850e-47 |
| Msa0098440 | Msa1033560 | 0.866815 | 2.163103e-65 | -8.615850e-47 |
| Msa0098440 | Msa1037900 | 0.835386 | 1.730048e-56 | -8.615850e-47 |
| Msa0098440 | Msa1037910 | 0.814257 | 1.688942e-51 | -8.615850e-47 |
| Msa0098440 | Msa1037920 | 0.804326 | 2.279581e-49 | -8.615850e-47 |
| Msa0098440 | Msa1041530 | 0.883803 | 3.292865e-71 | -8.615850e-47 |
| Msa0098440 | Msa1042670 | 0.829120 | 6.147229e-55 | -8.615850e-47 |
| Msa0098440 | Msa1045780 | 0.815884 | 7.352988e-52 | -8.615850e-47 |
| Msa0098440 | Msa1049010 | 0.805629 | 1.217327e-49 | -8.615850e-47 |
| Msa0098440 | Msa1055260 | 0.851532 | 8.347691e-61 | -8.615850e-47 |
| Msa0098440 | Msa1055280 | 0.849363 | 3.392321e-60 | -8.615850e-47 |
| Msa0098440 | Msa1055500 | 0.820998 | 5.100980e-53 | -8.615850e-47 |
| Msa0098440 | Msa1061500 | 0.815895 | 7.311018e-52 | -8.615850e-47 |
| Msa0098440 | Msa1073340 | 0.843031 | 1.799262e-58 | -8.615850e-47 |
| Msa0098440 | Msa1081570 | 0.885841 | 5.741470e-72 | -8.615850e-47 |
| Msa0098440 | Msa1095470 | 0.801822 | 7.509443e-49 | -8.615850e-47 |
| Msa0098440 | Msa1097640 | 0.817226 | 3.681269e-52 | -8.615850e-47 |
| Msa0098440 | Msa1100700 | 0.816702 | 4.824843e-52 | -8.615850e-47 |
| Msa0098440 | Msa1106810 | 0.843119 | 1.703972e-58 | -8.615850e-47 |
| Msa0098440 | Msa1113850 | 0.852777 | 3.695625e-61 | -8.615850e-47 |
| Msa0098440 | Msa1123880 | 0.845325 | 4.357423e-59 | -8.615850e-47 |
| Msa0098440 | Msa1127140 | 0.893469 | 6.107879e-75 | -8.615850e-47 |
| Msa0098440 | Msa1127950 | 0.806695 | 7.259003e-50 | -8.615850e-47 |
| Msa0098440 | Msa1129960 | 0.845748 | 3.346178e-59 | -8.615850e-47 |
| Msa0098440 | Msa1129970 | 0.819199 | 1.316477e-52 | -8.615850e-47 |
| Msa0098440 | Msa1129980 | 0.803513 | 3.363211e-49 | -8.615850e-47 |
| Msa0098440 | Msa1130010 | 0.800836 | 1.195504e-48 | -8.615850e-47 |
| Msa0098440 | Msa1133000 | 0.827031 | 1.958552e-54 | -8.615850e-47 |
| Msa0098440 | Msa1134110 | 0.819478 | 1.137197e-52 | -8.615850e-47 |
| Msa0098440 | Msa1135690 | 0.813408 | 2.599287e-51 | -8.615850e-47 |
| Msa0098440 | Msa1136230 | 0.806885 | 6.620546e-50 | -8.615850e-47 |
| Msa0098440 | Msa1139810 | 0.833540 | 5.029042e-56 | -8.615850e-47 |
| Msa0098440 | Msa1145020 | 0.872455 | 3.138616e-67 | -8.615850e-47 |
| Msa0098440 | Msa1160400 | 0.831645 | 1.484458e-55 | -8.615850e-47 |
| Msa0098440 | Msa1165870 | 0.802270 | 6.075785e-49 | -8.615850e-47 |
| Msa0098440 | Msa1166400 | 0.885712 | 6.416603e-72 | -8.615850e-47 |
| Msa0098440 | Msa1169990 | 0.850180 | 2.005905e-60 | -8.615850e-47 |
| Msa0098440 | Msa1176160 | 0.848228 | 7.006622e-60 | -8.615850e-47 |
| Msa0098440 | Msa1179280 | 0.807261 | 5.511068e-50 | -8.615850e-47 |
| Msa0098440 | Msa1186830 | 0.805604 | 1.232322e-49 | -8.615850e-47 |
| Msa0098440 | Msa1201110 | 0.805883 | 1.076420e-49 | -8.615850e-47 |
| Msa0098440 | Msa1201160 | 0.816983 | 4.172692e-52 | -8.615850e-47 |
| Msa0098440 | Msa1211090 | 0.809277 | 2.048302e-50 | -8.615850e-47 |
| Msa0098440 | Msa1227950 | 0.826091 | 3.281832e-54 | -8.615850e-47 |
| Msa0098440 | Msa1227970 | 0.812606 | 3.895425e-51 | -8.615850e-47 |
| Msa0098440 | Msa1228610 | 0.833299 | 5.777413e-56 | -8.615850e-47 |
| Msa0098440 | Msa1229700 | 0.813244 | 2.822917e-51 | -8.615850e-47 |
| Msa0098440 | Msa1233560 | 0.826226 | 3.046501e-54 | -8.615850e-47 |
| Msa0098440 | Msa1249870 | 0.828093 | 1.088564e-54 | -8.615850e-47 |
| Msa0098440 | Msa1254190 | 0.811112 | 8.240950e-51 | -8.615850e-47 |
| Msa0098440 | Msa1269580 | -0.808240 | 3.414042e-50 | -8.615850e-47 |
| Msa0098440 | Msa1272330 | 0.861946 | 7.176028e-64 | -8.615850e-47 |
| Msa0098440 | Msa1294290 | 0.809063 | 2.276664e-50 | -8.615850e-47 |
| Msa0098440 | Msa1305510 | 0.844355 | 7.958442e-59 | -8.615850e-47 |
| Msa0098440 | Msa1307190 | 0.835756 | 1.394475e-56 | -8.615850e-47 |
| Msa0098440 | Msa1310290 | 0.809658 | 1.697169e-50 | -8.615850e-47 |
| Msa0098440 | Msa1321000 | 0.802541 | 5.343647e-49 | -8.615850e-47 |
| Msa0098440 | Msa1351760 | 0.818555 | 1.843904e-52 | -8.615850e-47 |
| Msa0098440 | Msa1355400 | 0.864222 | 1.419781e-64 | -8.615850e-47 |
| Msa0098440 | Msa1365200 | 0.809530 | 1.808262e-50 | -8.615850e-47 |
| Msa0098440 | Msa1365320 | 0.815117 | 1.089681e-51 | -8.615850e-47 |
| Msa0098440 | Msa1374550 | 0.801831 | 7.479609e-49 | -8.615850e-47 |
| Msa0098440 | Msa1375940 | 0.818804 | 1.619192e-52 | -8.615850e-47 |
| Msa0098440 | Msa1379990 | 0.852257 | 5.196628e-61 | -8.615850e-47 |
| Msa0098440 | Msa1390310 | 0.823958 | 1.046162e-53 | -8.615850e-47 |
| Msa0098440 | Msa1391590 | 0.821253 | 4.455511e-53 | -8.615850e-47 |
| Msa0098440 | Msa1394890 | 0.802292 | 6.012674e-49 | -8.615850e-47 |
| Msa0098440 | Msa1408870 | 0.820875 | 5.444043e-53 | -8.615850e-47 |
| Msa0098440 | Msa1414930 | 0.830970 | 2.174914e-55 | -8.615850e-47 |
| Msa0098440 | Msa1420060 | 0.906363 | 1.608220e-80 | -8.615850e-47 |
| Msa0098440 | Msa1421550 | 0.864104 | 1.545316e-64 | -8.615850e-47 |
| Msa0098440 | Msa1429360 | -0.806639 | 7.462221e-50 | -8.615850e-47 |
| Msa0098440 | Msa1429420 | 0.824759 | 6.783121e-54 | -8.615850e-47 |
| Msa0098440 | Msa1430240 | 0.804018 | 2.642293e-49 | -8.615850e-47 |
| Msa0098440 | Msa1455590 | 0.812317 | 4.504868e-51 | -8.615850e-47 |
| Msa0098440 | Msa1461060 | 0.801060 | 1.075750e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0098440 | MtrunA17_Chr1g0151681 | 97.175 | 531 | 8 | 1 | 1 | 531 | 1 | 524 | 0.0 | 1063 |
| Msa0098440 | MtrunA17_Chr4g0025521 | 35.739 | 291 | 157 | 7 | 250 | 523 | 217 | 494 | 6.34e-48 | 177 |
| Msa0098440 | MtrunA17_Chr3g0141941 | 38.462 | 260 | 150 | 5 | 247 | 500 | 159 | 414 | 1.95e-44 | 164 |
| Msa0098440 | MtrunA17_Chr1g0155681 | 37.548 | 261 | 144 | 5 | 252 | 500 | 172 | 425 | 9.78e-44 | 164 |
| Msa0098440 | MtrunA17_Chr7g0267481 | 43.005 | 193 | 96 | 4 | 318 | 500 | 239 | 427 | 4.95e-43 | 162 |
| Msa0098440 | MtrunA17_Chr8g0373801 | 38.739 | 222 | 120 | 5 | 306 | 517 | 447 | 662 | 9.04e-42 | 160 |
| Msa0098440 | MtrunA17_Chr1g0177751 | 35.915 | 284 | 152 | 5 | 251 | 517 | 162 | 432 | 2.98e-41 | 157 |
| Msa0098440 | MtrunA17_Chr3g0141931 | 36.842 | 266 | 146 | 7 | 247 | 500 | 162 | 417 | 6.72e-41 | 153 |
| Msa0098440 | MtrunA17_Chr5g0403251 | 38.739 | 222 | 117 | 6 | 306 | 518 | 394 | 605 | 2.92e-40 | 155 |
| Msa0098440 | MtrunA17_Chr8g0387321 | 41.899 | 179 | 95 | 4 | 325 | 494 | 254 | 432 | 6.53e-39 | 150 |
| Msa0098440 | MtrunA17_Chr4g0008591 | 31.541 | 279 | 167 | 7 | 247 | 522 | 193 | 450 | 4.38e-37 | 144 |
| Msa0098440 | MtrunA17_Chr7g0240371 | 37.624 | 202 | 117 | 5 | 329 | 525 | 200 | 397 | 1.78e-36 | 142 |
| Msa0098440 | MtrunA17_Chr4g0028701 | 29.755 | 326 | 185 | 8 | 247 | 528 | 242 | 567 | 5.13e-35 | 139 |
| Msa0098440 | MtrunA17_Chr2g0327021 | 36.923 | 195 | 105 | 3 | 322 | 498 | 312 | 506 | 1.20e-33 | 135 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0098440 | AT4G32980.1 | 54.674 | 353 | 134 | 8 | 155 | 505 | 118 | 446 | 8.72e-112 | 340 |
| Msa0098440 | AT4G32980.2 | 54.674 | 353 | 134 | 8 | 155 | 505 | 118 | 446 | 8.72e-112 | 340 |
| Msa0098440 | AT2G16400.1 | 36.918 | 279 | 149 | 7 | 247 | 517 | 111 | 370 | 2.42e-43 | 160 |
| Msa0098440 | AT2G27220.1 | 41.622 | 185 | 82 | 5 | 324 | 500 | 131 | 297 | 4.93e-42 | 156 |
| Msa0098440 | AT2G27220.3 | 41.622 | 185 | 82 | 5 | 324 | 500 | 131 | 297 | 4.93e-42 | 156 |
| Msa0098440 | AT1G19700.1 | 34.799 | 273 | 145 | 7 | 247 | 500 | 162 | 420 | 6.94e-42 | 158 |
| Msa0098440 | AT1G19700.3 | 34.799 | 273 | 145 | 7 | 247 | 500 | 162 | 420 | 6.94e-42 | 158 |
| Msa0098440 | AT1G19700.5 | 34.799 | 273 | 145 | 7 | 247 | 500 | 162 | 420 | 6.94e-42 | 158 |
| Msa0098440 | AT1G19700.4 | 34.799 | 273 | 145 | 7 | 247 | 500 | 162 | 420 | 6.94e-42 | 158 |
| Msa0098440 | AT1G19700.2 | 34.799 | 273 | 145 | 7 | 247 | 500 | 162 | 420 | 6.94e-42 | 158 |
| Msa0098440 | AT4G34610.2 | 42.246 | 187 | 104 | 3 | 318 | 500 | 197 | 383 | 1.41e-41 | 157 |
| Msa0098440 | AT4G34610.4 | 42.246 | 187 | 104 | 3 | 318 | 500 | 197 | 383 | 1.41e-41 | 157 |
| Msa0098440 | AT4G34610.3 | 42.246 | 187 | 104 | 3 | 318 | 500 | 197 | 383 | 1.41e-41 | 157 |
| Msa0098440 | AT4G34610.1 | 42.246 | 187 | 104 | 3 | 318 | 500 | 197 | 383 | 1.41e-41 | 157 |
| Msa0098440 | AT1G75410.1 | 35.632 | 261 | 152 | 6 | 247 | 500 | 164 | 415 | 2.39e-41 | 156 |
| Msa0098440 | AT1G75410.2 | 35.632 | 261 | 152 | 6 | 247 | 500 | 164 | 415 | 2.39e-41 | 156 |
| Msa0098440 | AT2G35940.3 | 43.158 | 190 | 89 | 4 | 318 | 492 | 261 | 446 | 4.96e-41 | 157 |
| Msa0098440 | AT2G35940.1 | 43.158 | 190 | 89 | 4 | 318 | 492 | 261 | 446 | 4.96e-41 | 157 |
| Msa0098440 | AT2G35940.2 | 43.158 | 190 | 89 | 4 | 318 | 492 | 261 | 446 | 4.96e-41 | 157 |
| Msa0098440 | AT2G27220.2 | 42.941 | 170 | 71 | 5 | 339 | 500 | 164 | 315 | 1.67e-38 | 147 |
| Msa0098440 | AT1G75430.1 | 40.314 | 191 | 99 | 3 | 323 | 500 | 83 | 271 | 6.31e-38 | 141 |
| Msa0098440 | AT4G36870.2 | 36.538 | 208 | 114 | 4 | 305 | 500 | 366 | 567 | 2.53e-37 | 147 |
| Msa0098440 | AT4G36870.1 | 36.538 | 208 | 114 | 4 | 305 | 500 | 366 | 567 | 2.53e-37 | 147 |
| Msa0098440 | AT2G23760.2 | 37.255 | 204 | 110 | 4 | 307 | 498 | 294 | 491 | 4.94e-36 | 142 |
| Msa0098440 | AT2G23760.1 | 37.255 | 204 | 110 | 4 | 307 | 498 | 294 | 491 | 4.94e-36 | 142 |
| Msa0098440 | AT2G23760.3 | 37.255 | 204 | 110 | 4 | 307 | 498 | 294 | 491 | 4.94e-36 | 142 |
| Msa0098440 | AT5G41410.1 | 39.899 | 198 | 105 | 5 | 319 | 503 | 267 | 463 | 2.69e-35 | 140 |
| Msa0098440 | AT2G27990.1 | 40.462 | 173 | 99 | 3 | 328 | 499 | 323 | 492 | 1.71e-34 | 137 |
| Msa0098440 | AT5G02030.1 | 36.813 | 182 | 100 | 3 | 332 | 498 | 234 | 415 | 1.23e-29 | 123 |
| Msa0098440 | AT2G23760.4 | 29.688 | 256 | 110 | 5 | 307 | 498 | 294 | 543 | 1.17e-27 | 117 |
| Msa0098440 | AT1G75410.3 | 30.962 | 239 | 149 | 6 | 247 | 478 | 164 | 393 | 9.18e-26 | 109 |
| Msa0098440 | AT4G36870.4 | 31.551 | 187 | 110 | 4 | 305 | 479 | 366 | 546 | 1.07e-22 | 102 |
| Msa0098440 | AT4G36870.3 | 30.811 | 185 | 110 | 4 | 305 | 477 | 366 | 544 | 1.12e-21 | 99.0 |
| Msa0098440 | AT1G75430.2 | 31.081 | 148 | 87 | 3 | 323 | 457 | 83 | 228 | 1.49e-13 | 71.6 |
| Msa0098440 | AT2G27990.2 | 32.824 | 131 | 84 | 3 | 328 | 457 | 323 | 450 | 1.08e-12 | 70.5 |
Find 102 sgRNAs with CRISPR-Local
Find 189 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAATATCTTGCTATTAATTT+TGG | 0.094031 | 1_3:-4368998 | Msa0098440:three_prime_UTR |
| TTCCGTACATATTCAATAAT+TGG | 0.188620 | 1_3:-4371459 | Msa0098440:CDS |
| AATGGAATTCCAATACTTTC+TGG | 0.223215 | 1_3:-4371664 | Msa0098440:CDS |
| ATCTTTCTGGCAAGCCCCTT+TGG | 0.227378 | 1_3:+4369871 | None:intergenic |
| AACCAAAACAACATCATAAA+TGG | 0.230798 | 1_3:-4371682 | Msa0098440:CDS |
| ATGGAACTTTCTATGAGTTT+AGG | 0.232674 | 1_3:-4371106 | Msa0098440:CDS |
| TCTTTCTGGCAAGCCCCTTT+GGG | 0.243439 | 1_3:+4369872 | None:intergenic |
| AAATGCTTCTCTGCATCTTT+AGG | 0.274049 | 1_3:+4369564 | None:intergenic |
| TGAACCAACCTTATCTTAAT+AGG | 0.281459 | 1_3:+4371962 | None:intergenic |
| TCTTGATGAGATAAACTATT+CGG | 0.288114 | 1_3:-4370981 | Msa0098440:CDS |
| TTCCATTTATGATGTTGTTT+TGG | 0.288436 | 1_3:+4371680 | None:intergenic |
| TGGAACTTTCTATGAGTTTA+GGG | 0.292728 | 1_3:-4371105 | Msa0098440:CDS |
| AACGGTTTCTCGACTATATA+AGG | 0.297571 | 1_3:-4370051 | Msa0098440:CDS |
| CTGTTTCCGTTCTACGTGAT+TGG | 0.305984 | 1_3:-4369848 | Msa0098440:CDS |
| AACCCTTTGTGTGCAACTTT+TGG | 0.309541 | 1_3:-4371418 | Msa0098440:CDS |
| TATTCGGGTTCTGGTGTTAG+AGG | 0.338538 | 1_3:-4370965 | Msa0098440:CDS |
| GAGATAAACTATTCGGGTTC+TGG | 0.339602 | 1_3:-4370974 | Msa0098440:CDS |
| AAGCTCATTGCTACAATTAG+AGG | 0.372015 | 1_3:+4371246 | None:intergenic |
| ACAAGCCTCATGTAGTAGTA+TGG | 0.375487 | 1_3:-4371125 | Msa0098440:CDS |
| TTTGATGATTGCCATCCATT+TGG | 0.376214 | 1_3:+4371301 | None:intergenic |
| GAATGGAACAAGATCGGGTT+TGG | 0.377735 | 1_3:-4371149 | Msa0098440:CDS |
| AAGATACCTTGCTGTAATTC+AGG | 0.388861 | 1_3:-4371041 | Msa0098440:CDS |
| CTTGCAACATCTCCAACTTC+AGG | 0.394246 | 1_3:-4371214 | Msa0098440:CDS |
| GGTTTATAAATGCGCGTGTT+CGG | 0.404462 | 1_3:-4369175 | Msa0098440:CDS |
| CTTGATGAGATAAACTATTC+GGG | 0.413238 | 1_3:-4370980 | Msa0098440:CDS |
| AGAACGGAAACAGATCTTTC+TGG | 0.415143 | 1_3:+4369858 | None:intergenic |
| AGCTCTGTTTGATTTATGTA+AGG | 0.420611 | 1_3:-4371993 | Msa0098440:five_prime_UTR |
| TAAATGCGCGTGTTCGGCTA+TGG | 0.423300 | 1_3:-4369169 | Msa0098440:CDS |
| TTCATTCATTCAAAAGCAAT+GGG | 0.425095 | 1_3:-4369934 | Msa0098440:CDS |
| TATCTTGATCCTAATATTGC+GGG | 0.429149 | 1_3:+4371058 | None:intergenic |
| GCATACATTTCCTCAATCAA+TGG | 0.431572 | 1_3:+4369143 | None:intergenic |
| AAATGTTTAATATGAATTGA+AGG | 0.435021 | 1_3:-4369040 | Msa0098440:exon |
| CACCAAAAGTTGCACACAAA+GGG | 0.441669 | 1_3:+4371416 | None:intergenic |
| TAGCAAACATATTCTTTCCA+TGG | 0.443732 | 1_3:-4370012 | Msa0098440:CDS |
| GGGCTCTTCAACAGTTGAAA+AGG | 0.453231 | 1_3:-4369914 | Msa0098440:CDS |
| CAGTCAATATAGTCAATGTT+TGG | 0.454449 | 1_3:-4370153 | Msa0098440:CDS |
| TTATTAACAATGAGATTTGA+GGG | 0.454533 | 1_3:+4371538 | None:intergenic |
| TGCACACTTTGCTGTCAAAA+CGG | 0.454758 | 1_3:-4370069 | Msa0098440:CDS |
| TTCACCTCAAGAATAACAAA+AGG | 0.457859 | 1_3:+4372440 | None:intergenic |
| TGAAAAGGAAAGATCAGTTA+TGG | 0.458634 | 1_3:-4369899 | Msa0098440:CDS |
| GTTATTAACAATGAGATTTG+AGG | 0.462088 | 1_3:+4371537 | None:intergenic |
| CTTCATTCATTCAAAAGCAA+TGG | 0.463764 | 1_3:-4369935 | Msa0098440:CDS |
| TGTTCTCCACCAGAAAGTAT+TGG | 0.466176 | 1_3:+4371655 | None:intergenic |
| GCAAAGTGTGCATGTATTTG+TGG | 0.466187 | 1_3:+4370080 | None:intergenic |
| TTCCTATGCCTATTAAGATA+AGG | 0.479277 | 1_3:-4371970 | Msa0098440:intron |
| AGCATGAATGGAACAAGATC+GGG | 0.483225 | 1_3:-4371154 | Msa0098440:CDS |
| AAAGCTCAAGAGAGTAATGT+TGG | 0.486264 | 1_3:-4371364 | Msa0098440:CDS |
| ATTTATTCCTATCCTTCGCT+TGG | 0.489525 | 1_3:+4370910 | None:intergenic |
| TTCATGGTCAGAAGAGGATA+AGG | 0.491594 | 1_3:-4369973 | Msa0098440:CDS |
| AGCAAACATATTCTTTCCAT+GGG | 0.494717 | 1_3:-4370011 | Msa0098440:CDS |
| TCAGCATAAGCCTCTGACAT+AGG | 0.495314 | 1_3:+4370875 | None:intergenic |
| ACTGTTAAAATTTGATCCCA+TGG | 0.497477 | 1_3:+4369995 | None:intergenic |
| AATCAAACAGAGCTACCATA+TGG | 0.497678 | 1_3:+4372002 | None:intergenic |
| GACTTAACTCATAGCATGAA+TGG | 0.499550 | 1_3:-4371166 | Msa0098440:CDS |
| ATGAGAGCAGTGAAAGAAGC+AGG | 0.499804 | 1_3:-4369079 | Msa0098440:CDS |
| TCTGAGCATTGACCTGAAGT+TGG | 0.501236 | 1_3:+4371202 | None:intergenic |
| ATAGGGAACATCGGTCCAAA+TGG | 0.503828 | 1_3:-4371316 | Msa0098440:CDS |
| GGTTCTGGTGTTAGAGGCCG+AGG | 0.503924 | 1_3:-4370959 | Msa0098440:CDS |
| TGGTTGTGTAGGTATCAAAC+TGG | 0.504145 | 1_3:-4369196 | Msa0098440:intron |
| AAGTGGGTTGACTAGAAGTC+AGG | 0.504398 | 1_3:-4369529 | Msa0098440:intron |
| AACAAATGAATTATCAGCTA+TGG | 0.505083 | 1_3:+4371594 | None:intergenic |
| TCTTGAAGACCAATTCTAGC+AGG | 0.505334 | 1_3:+4371499 | None:intergenic |
| AGAAAAGCTTGTCGAAATGA+AGG | 0.508701 | 1_3:-4369107 | Msa0098440:CDS |
| ATCAGTTATGGAGGCCCCAA+AGG | 0.509828 | 1_3:-4369887 | Msa0098440:CDS |
| CTTTCTGGCAAGCCCCTTTG+GGG | 0.514861 | 1_3:+4369873 | None:intergenic |
| TCAGTTATGGAGGCCCCAAA+GGG | 0.515348 | 1_3:-4369886 | Msa0098440:CDS |
| TAGCATGAATGGAACAAGAT+CGG | 0.530199 | 1_3:-4371155 | Msa0098440:CDS |
| ACAAAGTTGATTTATTTCCT+CGG | 0.530630 | 1_3:+4370942 | None:intergenic |
| TGCCAATTATTGAATATGTA+CGG | 0.533743 | 1_3:+4371457 | None:intergenic |
| ATGCTGATTCTTCATTGCAA+AGG | 0.542693 | 1_3:-4370859 | Msa0098440:CDS |
| TCATGTCATATTCGCCGATA+GGG | 0.549107 | 1_3:-4371333 | Msa0098440:CDS |
| GCTATGGAAACCATTGATTG+AGG | 0.555071 | 1_3:-4369153 | Msa0098440:CDS |
| TTCTAGGTTATCATAGGACA+AGG | 0.561674 | 1_3:-4372100 | Msa0098440:intron |
| ATATATGTAAAAGTTCCATA+TGG | 0.565255 | 1_3:-4372017 | Msa0098440:five_prime_UTR |
| GTATCTTGATCCTAATATTG+CGG | 0.575599 | 1_3:+4371057 | None:intergenic |
| TAACAGTTCATGGTCAGAAG+AGG | 0.576067 | 1_3:-4369979 | Msa0098440:CDS |
| GGAACATCGGTCCAAATGGA+TGG | 0.576190 | 1_3:-4371312 | Msa0098440:CDS |
| GGAATTCCAATACTTTCTGG+TGG | 0.576914 | 1_3:-4371661 | Msa0098440:CDS |
| ACTCTTGATGCTTCTACAGA+TGG | 0.577737 | 1_3:-4370810 | Msa0098440:intron |
| ACTGCTCAAATGAACATGGC+TGG | 0.584941 | 1_3:-4371784 | Msa0098440:CDS |
| TCACCTCAAGAATAACAAAA+GGG | 0.585851 | 1_3:+4372441 | None:intergenic |
| AACACAACCAAGCGAAGGAT+AGG | 0.588145 | 1_3:-4370917 | Msa0098440:CDS |
| TTGTTACATCACAACATGGA+AGG | 0.589701 | 1_3:-4371576 | Msa0098440:CDS |
| AATGAATAGCAATGAATGAG+TGG | 0.594918 | 1_3:+4371715 | None:intergenic |
| AAACATCCAATCACGTAGAA+CGG | 0.600137 | 1_3:+4369842 | None:intergenic |
| TCACCAAAAGTTGCACACAA+AGG | 0.603199 | 1_3:+4371415 | None:intergenic |
| ACAACATGGAAGGACTATTG+TGG | 0.614360 | 1_3:-4371566 | Msa0098440:CDS |
| TTTGGACCGATGTTCCCTAT+CGG | 0.616890 | 1_3:+4371319 | None:intergenic |
| TAGATAATACTTACGGATGG+AGG | 0.617974 | 1_3:+4369811 | None:intergenic |
| TATATAAGGACTTGAGAGAG+AGG | 0.620065 | 1_3:-4370037 | Msa0098440:CDS |
| AAGTTCCATACTACTACATG+AGG | 0.620943 | 1_3:+4371120 | None:intergenic |
| TTCATGTCATATTCGCCGAT+AGG | 0.623576 | 1_3:-4371334 | Msa0098440:CDS |
| CGATGAGAGTCCTATGTCAG+AGG | 0.633802 | 1_3:-4370885 | Msa0098440:CDS |
| CCTCAAGAATAACAAAAGGG+TGG | 0.636614 | 1_3:+4372444 | None:intergenic |
| AACCTTATCTTAATAGGCAT+AGG | 0.640984 | 1_3:+4371968 | None:intergenic |
| TCATTTGTTACATCACAACA+TGG | 0.664816 | 1_3:-4371580 | Msa0098440:CDS |
| AAAGGAAAGATCAGTTATGG+AGG | 0.667219 | 1_3:-4369896 | Msa0098440:CDS |
| TGTCGAACACAACCAAGCGA+AGG | 0.672572 | 1_3:-4370922 | Msa0098440:CDS |
| GTACACTGCTCAAATGAACA+TGG | 0.673477 | 1_3:-4371788 | Msa0098440:CDS |
| GTATTTCCTGAATTACAGCA+AGG | 0.683112 | 1_3:+4371035 | None:intergenic |
| TATTCGCCGATAGGGAACAT+CGG | 0.714269 | 1_3:-4371325 | Msa0098440:CDS |
| CAGTTATGGAGGCCCCAAAG+GGG | 0.731077 | 1_3:-4369885 | Msa0098440:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATTAAAAAATGTGCTTT+TGG | - | chr1_3:4369062-4369081 | Msa0098440:CDS | 15.0% |
| !!! | TTTTCTAATTGTTTTCTAAA+TGG | - | chr1_3:4369554-4369573 | Msa0098440:CDS | 15.0% |
| !! | TGAATTTAATGTAATCTAAA+TGG | + | chr1_3:4370602-4370621 | None:intergenic | 15.0% |
| !!! | TAACCAAAGTTTTAATATAA+AGG | - | chr1_3:4371599-4371618 | Msa0098440:CDS | 15.0% |
| !! | GATCTTATTATTATAGATAA+AGG | + | chr1_3:4371742-4371761 | None:intergenic | 15.0% |
| !!! | TAATAACTTTTATACGATAA+GGG | + | chr1_3:4372117-4372136 | None:intergenic | 15.0% |
| !!! | TTAATAACTTTTATACGATA+AGG | + | chr1_3:4372118-4372137 | None:intergenic | 15.0% |
| !! | AAATGTTTAATATGAATTGA+AGG | - | chr1_3:4372335-4372354 | Msa0098440:intron | 15.0% |
| !!! | TAATATCTTGCTATTAATTT+TGG | - | chr1_3:4372377-4372396 | Msa0098440:intron | 15.0% |
| !!! | TGAGGTGAATTTTTTTTATA+TGG | - | chr1_3:4368949-4368968 | Msa0098440:three_prime_UTR | 20.0% |
| !!! | GATTAGAGTATCATTAAATT+TGG | + | chr1_3:4369215-4369234 | None:intergenic | 20.0% |
| !! | ATATATGTAAAAGTTCCATA+TGG | - | chr1_3:4369358-4369377 | Msa0098440:intron | 20.0% |
| !!! | ACAAGAACAATTTTAAGATA+AGG | + | chr1_3:4369474-4369493 | None:intergenic | 20.0% |
| !! | AGAAAATAGACTTAGAAAAA+TGG | + | chr1_3:4369518-4369537 | None:intergenic | 20.0% |
| !! | TTATTAACAATGAGATTTGA+GGG | + | chr1_3:4369840-4369859 | None:intergenic | 20.0% |
| !!! | CATGTAAATTGATTTATGTT+TGG | + | chr1_3:4370854-4370873 | None:intergenic | 20.0% |
| !!! | ACTTTTCCAAGTAAAATTTA+TGG | - | chr1_3:4370978-4370997 | Msa0098440:CDS | 20.0% |
| !! | TCGATTATAGATAATACTTA+CGG | + | chr1_3:4371574-4371593 | None:intergenic | 20.0% |
| !! | AGACCTTTATATTAAAACTT+TGG | + | chr1_3:4371605-4371624 | None:intergenic | 20.0% |
| !! | ATTTACTTGCAATAAAAAGT+GGG | - | chr1_3:4371830-4371849 | Msa0098440:intron | 20.0% |
| !!! | TTAAAACTGATTTTGGTATT+TGG | - | chr1_3:4371958-4371977 | Msa0098440:intron | 20.0% |
| !! | TTTCAACTGATAAATAATCT+TGG | + | chr1_3:4372015-4372034 | None:intergenic | 20.0% |
| !! | AGTGATTAGAGTTATATTTA+TGG | - | chr1_3:4372155-4372174 | Msa0098440:intron | 20.0% |
| !! | ATTAGAGTTATATTTATGGT+TGG | - | chr1_3:4372159-4372178 | Msa0098440:intron | 20.0% |
| ! | ACTATGCAATAAATCTTGAT+GGG | - | chr1_3:4369032-4369051 | Msa0098440:exon | 25.0% |
| ! | AAAGCAACATGAAAAACAAA+AGG | + | chr1_3:4369249-4369268 | None:intergenic | 25.0% |
| ! | AAGAAGTTGTCAAAAATGTT+TGG | - | chr1_3:4369315-4369334 | Msa0098440:intron | 25.0% |
| ! | AACCAAAACAACATCATAAA+TGG | - | chr1_3:4369693-4369712 | Msa0098440:intron | 25.0% |
| !!! | TTCCATTTATGATGTTGTTT+TGG | + | chr1_3:4369698-4369717 | None:intergenic | 25.0% |
| ! | AACAAATGAATTATCAGCTA+TGG | + | chr1_3:4369784-4369803 | None:intergenic | 25.0% |
| ! | GTTATTAACAATGAGATTTG+AGG | + | chr1_3:4369841-4369860 | None:intergenic | 25.0% |
| ! | TTCCGTACATATTCAATAAT+TGG | - | chr1_3:4369916-4369935 | Msa0098440:CDS | 25.0% |
| ! | TGCCAATTATTGAATATGTA+CGG | + | chr1_3:4369921-4369940 | None:intergenic | 25.0% |
| ! | TCTTGATGAGATAAACTATT+CGG | - | chr1_3:4370394-4370413 | Msa0098440:intron | 25.0% |
| !! | ACAAAGTTGATTTATTTCCT+CGG | + | chr1_3:4370436-4370455 | None:intergenic | 25.0% |
| ! | TTGATTTCTGATGTTTAGAA+TGG | - | chr1_3:4370700-4370719 | Msa0098440:intron | 25.0% |
| !!! | AGAATGGATTTTGACATTTT+TGG | - | chr1_3:4370716-4370735 | Msa0098440:intron | 25.0% |
| ! | TTCCAAGTAAAATTTATGGA+TGG | - | chr1_3:4370982-4371001 | Msa0098440:CDS | 25.0% |
| !! | AACCATCCATAAATTTTACT+TGG | + | chr1_3:4370987-4371006 | None:intergenic | 25.0% |
| !!! | TAGTAGTCTTTATTTTACTC+AGG | - | chr1_3:4371195-4371214 | Msa0098440:CDS | 25.0% |
| !!! | GATCAAATTTTAACAGTTCA+TGG | - | chr1_3:4371386-4371405 | Msa0098440:CDS | 25.0% |
| ! | TTCATTCATTCAAAAGCAAT+GGG | - | chr1_3:4371441-4371460 | Msa0098440:CDS | 25.0% |
| ! | TTATAGATAATACTTACGGA+TGG | + | chr1_3:4371570-4371589 | None:intergenic | 25.0% |
| ! | CATTTACTTGCAATAAAAAG+TGG | - | chr1_3:4371829-4371848 | Msa0098440:intron | 25.0% |
| !!! | GTCACATACATATTTTGATT+CGG | - | chr1_3:4371878-4371897 | Msa0098440:intron | 25.0% |
| ! | ATTTATCAGTTGAAAACATG+TGG | - | chr1_3:4372020-4372039 | Msa0098440:five_prime_UTR | 25.0% |
| TCACCTCAAGAATAACAAAA+GGG | + | chr1_3:4368937-4368956 | None:intergenic | 30.0% | |
| TTCACCTCAAGAATAACAAA+AGG | + | chr1_3:4368938-4368957 | None:intergenic | 30.0% | |
| ! | TTTGAGCTTTTTGTGTGTAT+TGG | - | chr1_3:4368987-4369006 | Msa0098440:three_prime_UTR | 30.0% |
| TATTGGAGTTGAGAAATGAA+TGG | - | chr1_3:4369004-4369023 | Msa0098440:three_prime_UTR | 30.0% | |
| CACTATGCAATAAATCTTGA+TGG | - | chr1_3:4369031-4369050 | Msa0098440:exon | 30.0% | |
| !!! | AAAAATGTGCTTTTGGAGTT+TGG | - | chr1_3:4369069-4369088 | Msa0098440:CDS | 30.0% |
| !!! | AAAATGTGCTTTTGGAGTTT+GGG | - | chr1_3:4369070-4369089 | Msa0098440:CDS | 30.0% |
| TTGCTAATGTTCATGCATAT+TGG | - | chr1_3:4369111-4369130 | Msa0098440:CDS | 30.0% | |
| ! | TGAATATCAAAAGCATGCAT+TGG | + | chr1_3:4369138-4369157 | None:intergenic | 30.0% |
| !!! | ATGTTGCTTTGTTGTTTTCT+AGG | - | chr1_3:4369259-4369278 | Msa0098440:intron | 30.0% |
| !! | GTTGTTTTCTAGGTTATCAT+AGG | - | chr1_3:4369269-4369288 | Msa0098440:intron | 30.0% |
| ! | ATTTTTGACAACTTCTTTGC+AGG | + | chr1_3:4369312-4369331 | None:intergenic | 30.0% |
| ! | AGCTCTGTTTGATTTATGTA+AGG | - | chr1_3:4369382-4369401 | Msa0098440:intron | 30.0% |
| TTCCTATGCCTATTAAGATA+AGG | - | chr1_3:4369405-4369424 | Msa0098440:intron | 30.0% | |
| AACCTTATCTTAATAGGCAT+AGG | + | chr1_3:4369410-4369429 | None:intergenic | 30.0% | |
| TATGCCTATTAAGATAAGGT+TGG | - | chr1_3:4369409-4369428 | Msa0098440:intron | 30.0% | |
| TGAACCAACCTTATCTTAAT+AGG | + | chr1_3:4369416-4369435 | None:intergenic | 30.0% | |
| AATGAATAGCAATGAATGAG+TGG | + | chr1_3:4369663-4369682 | None:intergenic | 30.0% | |
| !!! | TGATGTTGTTTTGGTTGTTA+AGG | + | chr1_3:4369689-4369708 | None:intergenic | 30.0% |
| AATGGAATTCCAATACTTTC+TGG | - | chr1_3:4369711-4369730 | Msa0098440:intron | 30.0% | |
| ! | TCATTTGTTACATCACAACA+TGG | - | chr1_3:4369795-4369814 | Msa0098440:intron | 30.0% |
| ATGGAACTTTCTATGAGTTT+AGG | - | chr1_3:4370269-4370288 | Msa0098440:intron | 30.0% | |
| TGGAACTTTCTATGAGTTTA+GGG | - | chr1_3:4370270-4370289 | Msa0098440:intron | 30.0% | |
| TATCTTGATCCTAATATTGC+GGG | + | chr1_3:4370320-4370339 | None:intergenic | 30.0% | |
| GTATCTTGATCCTAATATTG+CGG | + | chr1_3:4370321-4370340 | None:intergenic | 30.0% | |
| CTTGATGAGATAAACTATTC+GGG | - | chr1_3:4370395-4370414 | Msa0098440:intron | 30.0% | |
| AAACATACACTAATTCGATC+AGG | + | chr1_3:4370652-4370671 | None:intergenic | 30.0% | |
| ! | TCGAATTAGTGTATGTTTTC+TGG | - | chr1_3:4370654-4370673 | Msa0098440:intron | 30.0% |
| AGGCTAAAAATCAATTGTAG+AGG | + | chr1_3:4370794-4370813 | None:intergenic | 30.0% | |
| TTGATTGAGCGATAAATTCA+AGG | + | chr1_3:4370814-4370833 | None:intergenic | 30.0% | |
| ! | AAGTGAACAATTTTGCATCT+AGG | + | chr1_3:4370949-4370968 | None:intergenic | 30.0% |
| GCAAATTGTATGATGTTGAA+TGG | - | chr1_3:4371045-4371064 | Msa0098440:CDS | 30.0% | |
| !!! | TAGTCTTTATTTTACTCAGG+TGG | - | chr1_3:4371198-4371217 | Msa0098440:CDS | 30.0% |
| CAGTCAATATAGTCAATGTT+TGG | - | chr1_3:4371222-4371241 | Msa0098440:CDS | 30.0% | |
| TAGCAAACATATTCTTTCCA+TGG | - | chr1_3:4371363-4371382 | Msa0098440:CDS | 30.0% | |
| AGCAAACATATTCTTTCCAT+GGG | - | chr1_3:4371364-4371383 | Msa0098440:CDS | 30.0% | |
| ACTGTTAAAATTTGATCCCA+TGG | + | chr1_3:4371383-4371402 | None:intergenic | 30.0% | |
| CTTCATTCATTCAAAAGCAA+TGG | - | chr1_3:4371440-4371459 | Msa0098440:CDS | 30.0% | |
| TGAAAAGGAAAGATCAGTTA+TGG | - | chr1_3:4371476-4371495 | Msa0098440:CDS | 30.0% | |
| GATAAAAAACCTTGATACTG+TGG | + | chr1_3:4371644-4371663 | None:intergenic | 30.0% | |
| ! | CCTGACTATTAATTTGGAAT+CGG | + | chr1_3:4371928-4371947 | None:intergenic | 30.0% |
| ! | GTCATTAATTTGAGATCGAA+TGG | + | chr1_3:4371993-4372012 | None:intergenic | 30.0% |
| CAAGGATTAAGTAATGTCTA+CGG | + | chr1_3:4372056-4372075 | None:intergenic | 30.0% | |
| ! | GATAAGGGCTACATTTTTAA+TGG | + | chr1_3:4372102-4372121 | None:intergenic | 30.0% |
| ! | ATATTTATGGTTGGTTGTGT+AGG | - | chr1_3:4372168-4372187 | Msa0098440:intron | 30.0% |
| ! | AACCAGAAGTATGCTGAAAA+GGG | + | chr1_3:4369161-4369180 | None:intergenic | 35.0% |
| ! | AAACCAGAAGTATGCTGAAA+AGG | + | chr1_3:4369162-4369181 | None:intergenic | 35.0% |
| TTCTAGGTTATCATAGGACA+AGG | - | chr1_3:4369275-4369294 | Msa0098440:intron | 35.0% | |
| AATCAAACAGAGCTACCATA+TGG | + | chr1_3:4369376-4369395 | None:intergenic | 35.0% | |
| TTGTTACATCACAACATGGA+AGG | - | chr1_3:4369799-4369818 | Msa0098440:intron | 35.0% | |
| ! | TTTTCAGTTCCTGCTAGAAT+TGG | - | chr1_3:4369867-4369886 | Msa0098440:CDS | 35.0% |
| AAAGCTCAAGAGAGTAATGT+TGG | - | chr1_3:4370011-4370030 | Msa0098440:CDS | 35.0% | |
| ! | TTTGATGATTGCCATCCATT+TGG | + | chr1_3:4370077-4370096 | None:intergenic | 35.0% |
| AAGCTCATTGCTACAATTAG+AGG | + | chr1_3:4370132-4370151 | None:intergenic | 35.0% | |
| GACTTAACTCATAGCATGAA+TGG | - | chr1_3:4370209-4370228 | Msa0098440:intron | 35.0% | |
| TAGCATGAATGGAACAAGAT+CGG | - | chr1_3:4370220-4370239 | Msa0098440:intron | 35.0% | |
| AAGTTCCATACTACTACATG+AGG | + | chr1_3:4370258-4370277 | None:intergenic | 35.0% | |
| ! | AAATTTTCGCCCGCAATATT+AGG | - | chr1_3:4370308-4370327 | Msa0098440:intron | 35.0% |
| ! | AAGATACCTTGCTGTAATTC+AGG | - | chr1_3:4370334-4370353 | Msa0098440:intron | 35.0% |
| GTATTTCCTGAATTACAGCA+AGG | + | chr1_3:4370343-4370362 | None:intergenic | 35.0% | |
| ATTTATTCCTATCCTTCGCT+TGG | + | chr1_3:4370468-4370487 | None:intergenic | 35.0% | |
| !! | ATGCTGATTCTTCATTGCAA+AGG | - | chr1_3:4370516-4370535 | Msa0098440:intron | 35.0% |
| AATTCGATCAGGACTATGAA+CGG | + | chr1_3:4370641-4370660 | None:intergenic | 35.0% | |
| ! | TCTGGTTTCATTCTTGAACA+TGG | - | chr1_3:4370672-4370691 | Msa0098440:intron | 35.0% |
| TTTACATGCAACACACTCTT+AGG | - | chr1_3:4370866-4370885 | Msa0098440:CDS | 35.0% | |
| ACATTCCAAAGTTACACACA+AGG | - | chr1_3:4371107-4371126 | Msa0098440:CDS | 35.0% | |
| TTGATCCTTGTGTGTAACTT+TGG | + | chr1_3:4371115-4371134 | None:intergenic | 35.0% | |
| AAGTTACACACAAGGATCAA+AGG | - | chr1_3:4371115-4371134 | Msa0098440:CDS | 35.0% | |
| AACGGTTTCTCGACTATATA+AGG | - | chr1_3:4371324-4371343 | Msa0098440:CDS | 35.0% | |
| TATATAAGGACTTGAGAGAG+AGG | - | chr1_3:4371338-4371357 | Msa0098440:CDS | 35.0% | |
| AAAGGAAAGATCAGTTATGG+AGG | - | chr1_3:4371479-4371498 | Msa0098440:CDS | 35.0% | |
| AAACATCCAATCACGTAGAA+CGG | + | chr1_3:4371536-4371555 | None:intergenic | 35.0% | |
| TAGATAATACTTACGGATGG+AGG | + | chr1_3:4371567-4371586 | None:intergenic | 35.0% | |
| !!! | AGGTTTTTTATCCCCAATTC+CGG | - | chr1_3:4371652-4371671 | Msa0098440:CDS | 35.0% |
| AGATCATTGATGAATGCATG+TGG | - | chr1_3:4371757-4371776 | Msa0098440:CDS | 35.0% | |
| ACAATGATGTGATGCATTTC+AGG | - | chr1_3:4371785-4371804 | Msa0098440:CDS | 35.0% | |
| AAATGCTTCTCTGCATCTTT+AGG | + | chr1_3:4371814-4371833 | None:intergenic | 35.0% | |
| CCGATTCCAAATTAATAGTC+AGG | - | chr1_3:4371925-4371944 | Msa0098440:intron | 35.0% | |
| TCCAAATTAATAGTCAGGTC+AGG | - | chr1_3:4371930-4371949 | Msa0098440:intron | 35.0% | |
| TCCTGACCTGACTATTAATT+TGG | + | chr1_3:4371934-4371953 | None:intergenic | 35.0% | |
| ATTAATAGTCAGGTCAGGAT+CGG | - | chr1_3:4371935-4371954 | Msa0098440:intron | 35.0% | |
| !! | GGATCGGTTAAAACTGATTT+TGG | - | chr1_3:4371951-4371970 | Msa0098440:intron | 35.0% |
| ! | GTTGAAAACATGTGGTTTTC+CGG | - | chr1_3:4372028-4372047 | Msa0098440:five_prime_UTR | 35.0% |
| TTAAGTAATGTCTACGGATC+CGG | + | chr1_3:4372050-4372069 | None:intergenic | 35.0% | |
| !!! | TAATCCTTGCTTGTTTTGAG+AGG | - | chr1_3:4372067-4372086 | Msa0098440:five_prime_UTR | 35.0% |
| GCATACATTTCCTCAATCAA+TGG | + | chr1_3:4372235-4372254 | None:intergenic | 35.0% | |
| AGAAAAGCTTGTCGAAATGA+AGG | - | chr1_3:4372268-4372287 | Msa0098440:intron | 35.0% | |
| CCTCAAGAATAACAAAAGGG+TGG | + | chr1_3:4368934-4368953 | None:intergenic | 40.0% | |
| !!! | CCACCCTTTTGTTATTCTTG+AGG | - | chr1_3:4368931-4368950 | Msa0098440:three_prime_UTR | 40.0% |
| GTACACTGCTCAAATGAACA+TGG | - | chr1_3:4369587-4369606 | Msa0098440:intron | 40.0% | |
| GGAATTCCAATACTTTCTGG+TGG | - | chr1_3:4369714-4369733 | Msa0098440:intron | 40.0% | |
| ! | TGTTCTCCACCAGAAAGTAT+TGG | + | chr1_3:4369723-4369742 | None:intergenic | 40.0% |
| ACAACATGGAAGGACTATTG+TGG | - | chr1_3:4369809-4369828 | Msa0098440:intron | 40.0% | |
| TCTTGAAGACCAATTCTAGC+AGG | + | chr1_3:4369879-4369898 | None:intergenic | 40.0% | |
| ! | AACCCTTTGTGTGCAACTTT+TGG | - | chr1_3:4369957-4369976 | Msa0098440:CDS | 40.0% |
| CACCAAAAGTTGCACACAAA+GGG | + | chr1_3:4369962-4369981 | None:intergenic | 40.0% | |
| TCACCAAAAGTTGCACACAA+AGG | + | chr1_3:4369963-4369982 | None:intergenic | 40.0% | |
| TTCATGTCATATTCGCCGAT+AGG | - | chr1_3:4370041-4370060 | Msa0098440:CDS | 40.0% | |
| TCATGTCATATTCGCCGATA+GGG | - | chr1_3:4370042-4370061 | Msa0098440:CDS | 40.0% | |
| AGCATGAATGGAACAAGATC+GGG | - | chr1_3:4370221-4370240 | Msa0098440:intron | 40.0% | |
| ACAAGCCTCATGTAGTAGTA+TGG | - | chr1_3:4370250-4370269 | Msa0098440:intron | 40.0% | |
| ! | GAGATAAACTATTCGGGTTC+TGG | - | chr1_3:4370401-4370420 | Msa0098440:intron | 40.0% |
| ACTCTTGATGCTTCTACAGA+TGG | - | chr1_3:4370565-4370584 | Msa0098440:intron | 40.0% | |
| GCAAAGTGTGCATGTATTTG+TGG | + | chr1_3:4371298-4371317 | None:intergenic | 40.0% | |
| ! | TGCACACTTTGCTGTCAAAA+CGG | - | chr1_3:4371306-4371325 | Msa0098440:CDS | 40.0% |
| TAACAGTTCATGGTCAGAAG+AGG | - | chr1_3:4371396-4371415 | Msa0098440:CDS | 40.0% | |
| TTCATGGTCAGAAGAGGATA+AGG | - | chr1_3:4371402-4371421 | Msa0098440:CDS | 40.0% | |
| AGAACGGAAACAGATCTTTC+TGG | + | chr1_3:4371520-4371539 | None:intergenic | 40.0% | |
| AGTTCCTCTCAAAACAAGCA+AGG | + | chr1_3:4372074-4372093 | None:intergenic | 40.0% | |
| TGGTTGTGTAGGTATCAAAC+TGG | - | chr1_3:4372179-4372198 | Msa0098440:intron | 40.0% | |
| GGTTTATAAATGCGCGTGTT+CGG | - | chr1_3:4372200-4372219 | Msa0098440:intron | 40.0% | |
| ! | GCTATGGAAACCATTGATTG+AGG | - | chr1_3:4372222-4372241 | Msa0098440:intron | 40.0% |
| ! | CACCCTTTTCAGCATACTTC+TGG | - | chr1_3:4369156-4369175 | Msa0098440:CDS | 45.0% |
| ACTGCTCAAATGAACATGGC+TGG | - | chr1_3:4369591-4369610 | Msa0098440:intron | 45.0% | |
| TATTCGCCGATAGGGAACAT+CGG | - | chr1_3:4370050-4370069 | Msa0098440:CDS | 45.0% | |
| TTTGGACCGATGTTCCCTAT+CGG | + | chr1_3:4370059-4370078 | None:intergenic | 45.0% | |
| ATAGGGAACATCGGTCCAAA+TGG | - | chr1_3:4370059-4370078 | Msa0098440:CDS | 45.0% | |
| CTTGCAACATCTCCAACTTC+AGG | - | chr1_3:4370161-4370180 | Msa0098440:CDS | 45.0% | |
| !! | TCTGAGCATTGACCTGAAGT+TGG | + | chr1_3:4370176-4370195 | None:intergenic | 45.0% |
| GAATGGAACAAGATCGGGTT+TGG | - | chr1_3:4370226-4370245 | Msa0098440:intron | 45.0% | |
| ! | TATTCGGGTTCTGGTGTTAG+AGG | - | chr1_3:4370410-4370429 | Msa0098440:intron | 45.0% |
| AACACAACCAAGCGAAGGAT+AGG | - | chr1_3:4370458-4370477 | Msa0098440:intron | 45.0% | |
| TCAGCATAAGCCTCTGACAT+AGG | + | chr1_3:4370503-4370522 | None:intergenic | 45.0% | |
| GGGCTCTTCAACAGTTGAAA+AGG | - | chr1_3:4371461-4371480 | Msa0098440:CDS | 45.0% | |
| CTGTTTCCGTTCTACGTGAT+TGG | - | chr1_3:4371527-4371546 | Msa0098440:CDS | 45.0% | |
| !! | AAGTGGGTTGACTAGAAGTC+AGG | - | chr1_3:4371846-4371865 | Msa0098440:intron | 45.0% |
| ATGAGAGCAGTGAAAGAAGC+AGG | - | chr1_3:4372296-4372315 | Msa0098440:intron | 45.0% | |
| GGAACATCGGTCCAAATGGA+TGG | - | chr1_3:4370063-4370082 | Msa0098440:CDS | 50.0% | |
| TGTCGAACACAACCAAGCGA+AGG | - | chr1_3:4370453-4370472 | Msa0098440:intron | 50.0% | |
| CGATGAGAGTCCTATGTCAG+AGG | - | chr1_3:4370490-4370509 | Msa0098440:intron | 50.0% | |
| ATCAGTTATGGAGGCCCCAA+AGG | - | chr1_3:4371488-4371507 | Msa0098440:CDS | 50.0% | |
| TCAGTTATGGAGGCCCCAAA+GGG | - | chr1_3:4371489-4371508 | Msa0098440:CDS | 50.0% | |
| ! | TCTTTCTGGCAAGCCCCTTT+GGG | + | chr1_3:4371506-4371525 | None:intergenic | 50.0% |
| ! | ATCTTTCTGGCAAGCCCCTT+TGG | + | chr1_3:4371507-4371526 | None:intergenic | 50.0% |
| CGATTGCAGCCACAGTATCA+AGG | - | chr1_3:4371632-4371651 | Msa0098440:CDS | 50.0% | |
| TAAATGCGCGTGTTCGGCTA+TGG | - | chr1_3:4372206-4372225 | Msa0098440:intron | 50.0% | |
| CAGTTATGGAGGCCCCAAAG+GGG | - | chr1_3:4371490-4371509 | Msa0098440:CDS | 55.0% | |
| ! | CTTTCTGGCAAGCCCCTTTG+GGG | + | chr1_3:4371505-4371524 | None:intergenic | 55.0% |
| AGCTGATGCAGCCGGAATTG+GGG | + | chr1_3:4371666-4371685 | None:intergenic | 55.0% | |
| CAGCTGATGCAGCCGGAATT+GGG | + | chr1_3:4371667-4371686 | None:intergenic | 55.0% | |
| CGAAATGCAGCTGATGCAGC+CGG | + | chr1_3:4371674-4371693 | None:intergenic | 55.0% | |
| ! | GGTTCTGGTGTTAGAGGCCG+AGG | - | chr1_3:4370416-4370435 | Msa0098440:intron | 60.0% |
| GCAGCTGATGCAGCCGGAAT+TGG | + | chr1_3:4371668-4371687 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 4368930 | 4372467 | 4368930 | ID=Msa0098440;Name=Msa0098440 |
| chr1_3 | mRNA | 4368930 | 4372467 | 4368930 | ID=Msa0098440-mRNA-1;Parent=Msa0098440;Name=Msa0098440-mRNA-1;_AED=0.05;_eAED=0.05;_QI=190|1|1|1|0.6|0.5|6|113|531 |
| chr1_3 | exon | 4368930 | 4369207 | 4368930 | ID=Msa0098440-mRNA-1:exon:1472;Parent=Msa0098440-mRNA-1 |
| chr1_3 | exon | 4369530 | 4369590 | 4369530 | ID=Msa0098440-mRNA-1:exon:1471;Parent=Msa0098440-mRNA-1 |
| chr1_3 | exon | 4369825 | 4370180 | 4369825 | ID=Msa0098440-mRNA-1:exon:1470;Parent=Msa0098440-mRNA-1 |
| chr1_3 | exon | 4370811 | 4371845 | 4370811 | ID=Msa0098440-mRNA-1:exon:1469;Parent=Msa0098440-mRNA-1 |
| chr1_3 | exon | 4371971 | 4372116 | 4371971 | ID=Msa0098440-mRNA-1:exon:1468;Parent=Msa0098440-mRNA-1 |
| chr1_3 | exon | 4372445 | 4372467 | 4372445 | ID=Msa0098440-mRNA-1:exon:1467;Parent=Msa0098440-mRNA-1 |
| chr1_3 | five_prime_UTR | 4372445 | 4372467 | 4372445 | ID=Msa0098440-mRNA-1:five_prime_utr;Parent=Msa0098440-mRNA-1 |
| chr1_3 | five_prime_UTR | 4371971 | 4372116 | 4371971 | ID=Msa0098440-mRNA-1:five_prime_utr;Parent=Msa0098440-mRNA-1 |
| chr1_3 | five_prime_UTR | 4371825 | 4371845 | 4371825 | ID=Msa0098440-mRNA-1:five_prime_utr;Parent=Msa0098440-mRNA-1 |
| chr1_3 | CDS | 4370811 | 4371824 | 4370811 | ID=Msa0098440-mRNA-1:cds;Parent=Msa0098440-mRNA-1 |
| chr1_3 | CDS | 4369825 | 4370180 | 4369825 | ID=Msa0098440-mRNA-1:cds;Parent=Msa0098440-mRNA-1 |
| chr1_3 | CDS | 4369530 | 4369590 | 4369530 | ID=Msa0098440-mRNA-1:cds;Parent=Msa0098440-mRNA-1 |
| chr1_3 | CDS | 4369043 | 4369207 | 4369043 | ID=Msa0098440-mRNA-1:cds;Parent=Msa0098440-mRNA-1 |
| chr1_3 | three_prime_UTR | 4368930 | 4369042 | 4368930 | ID=Msa0098440-mRNA-1:three_prime_utr;Parent=Msa0098440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
