Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0005050 | XP_003589026.1 | 97.175 | 531 | 8 | 1 | 1 | 531 | 1 | 524 | 0.0 | 1061 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0005050 | sp|P48731|ATH1_ARATH | 58.228 | 316 | 110 | 6 | 191 | 505 | 152 | 446 | 3.04e-109 | 337 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0005050 | TF | HB-BELL |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002930 | Msa0005050 | 0.822591 | 2.182152e-53 | -8.615850e-47 |
| Msa0004360 | Msa0005050 | 0.856071 | 4.121492e-62 | -8.615850e-47 |
| Msa0005050 | Msa0012440 | 0.817325 | 3.496532e-52 | -8.615850e-47 |
| Msa0005050 | Msa0016120 | 0.829167 | 5.988009e-55 | -8.615850e-47 |
| Msa0005050 | Msa0016670 | 0.815503 | 8.943517e-52 | -8.615850e-47 |
| Msa0005050 | Msa0024680 | 0.803161 | 3.978460e-49 | -8.615850e-47 |
| Msa0005050 | Msa0030310 | 0.804573 | 2.024310e-49 | -8.615850e-47 |
| Msa0005050 | Msa0032840 | -0.822387 | 2.434104e-53 | -8.615850e-47 |
| Msa0005050 | Msa0036430 | 0.847079 | 1.450745e-59 | -8.615850e-47 |
| Msa0005050 | Msa0043210 | 0.800015 | 1.756862e-48 | -8.615850e-47 |
| Msa0005050 | Msa0044020 | 0.813249 | 2.816357e-51 | -8.615850e-47 |
| Msa0005050 | Msa0048200 | 0.817943 | 2.537000e-52 | -8.615850e-47 |
| Msa0005050 | Msa0050040 | 0.861915 | 7.331642e-64 | -8.615850e-47 |
| Msa0005050 | Msa0053110 | 0.977354 | 1.295282e-143 | -8.615850e-47 |
| Msa0005050 | Msa0057240 | 0.815780 | 7.756749e-52 | -8.615850e-47 |
| Msa0005050 | Msa0072810 | 0.860377 | 2.154796e-63 | -8.615850e-47 |
| Msa0005050 | Msa0073670 | 0.821350 | 4.231551e-53 | -8.615850e-47 |
| Msa0005050 | Msa0083920 | 0.812106 | 5.010004e-51 | -8.615850e-47 |
| Msa0005050 | Msa0084500 | 0.849097 | 4.024033e-60 | -8.615850e-47 |
| Msa0005050 | Msa0098440 | 0.935127 | 1.380507e-96 | -8.615850e-47 |
| Msa0005050 | Msa0102990 | 0.862145 | 6.235926e-64 | -8.615850e-47 |
| Msa0005050 | Msa0103000 | 0.853815 | 1.862151e-61 | -8.615850e-47 |
| Msa0005050 | Msa0106790 | 0.818017 | 2.440874e-52 | -8.615850e-47 |
| Msa0005050 | Msa0110970 | 0.827395 | 1.602377e-54 | -8.615850e-47 |
| Msa0005050 | Msa0114540 | -0.804681 | 1.922267e-49 | -8.615850e-47 |
| Msa0005050 | Msa0118400 | 0.825672 | 4.124935e-54 | -8.615850e-47 |
| Msa0005050 | Msa0120330 | 0.806082 | 9.775768e-50 | -8.615850e-47 |
| Msa0005050 | Msa0124340 | 0.815792 | 7.709451e-52 | -8.615850e-47 |
| Msa0005050 | Msa0125580 | 0.801667 | 8.081236e-49 | -8.615850e-47 |
| Msa0005050 | Msa0130010 | 0.830771 | 2.433668e-55 | -8.615850e-47 |
| Msa0005050 | Msa0130570 | 0.822289 | 2.564673e-53 | -8.615850e-47 |
| Msa0005050 | Msa0134130 | 0.848715 | 5.137578e-60 | -8.615850e-47 |
| Msa0005050 | Msa0139900 | 0.823273 | 1.513307e-53 | -8.615850e-47 |
| Msa0005050 | Msa0141600 | 0.840343 | 9.208286e-58 | -8.615850e-47 |
| Msa0005050 | Msa0147560 | 0.851619 | 7.887351e-61 | -8.615850e-47 |
| Msa0005050 | Msa0147600 | 0.808165 | 3.542021e-50 | -8.615850e-47 |
| Msa0005050 | Msa0149560 | 0.814633 | 1.394638e-51 | -8.615850e-47 |
| Msa0005050 | Msa0153420 | 0.826249 | 3.009043e-54 | -8.615850e-47 |
| Msa0005050 | Msa0169570 | 0.833741 | 4.480916e-56 | -8.615850e-47 |
| Msa0005050 | Msa0172350 | 0.802919 | 4.463306e-49 | -8.615850e-47 |
| Msa0005050 | Msa0176470 | 0.821234 | 4.498697e-53 | -8.615850e-47 |
| Msa0005050 | Msa0181610 | 0.805842 | 1.098326e-49 | -8.615850e-47 |
| Msa0005050 | Msa0183830 | 0.805190 | 1.504188e-49 | -8.615850e-47 |
| Msa0005050 | Msa0186890 | 0.800849 | 1.188144e-48 | -8.615850e-47 |
| Msa0005050 | Msa0200970 | 0.806731 | 7.134397e-50 | -8.615850e-47 |
| Msa0005050 | Msa0203030 | 0.822849 | 1.901121e-53 | -8.615850e-47 |
| Msa0005050 | Msa0203160 | 0.856932 | 2.302610e-62 | -8.615850e-47 |
| Msa0005050 | Msa0219190 | 0.875662 | 2.581382e-68 | -8.615850e-47 |
| Msa0005050 | Msa0219310 | 0.816616 | 5.045405e-52 | -8.615850e-47 |
| Msa0005050 | Msa0230550 | -0.819584 | 1.075578e-52 | -8.615850e-47 |
| Msa0005050 | Msa0238890 | 0.808561 | 2.916097e-50 | -8.615850e-47 |
| Msa0005050 | Msa0242230 | 0.809307 | 2.018783e-50 | -8.615850e-47 |
| Msa0005050 | Msa0246690 | 0.801573 | 8.447564e-49 | -8.615850e-47 |
| Msa0005050 | Msa0257680 | 0.824261 | 8.881580e-54 | -8.615850e-47 |
| Msa0005050 | Msa0258940 | 0.802686 | 4.985930e-49 | -8.615850e-47 |
| Msa0005050 | Msa0262930 | 0.804677 | 1.925589e-49 | -8.615850e-47 |
| Msa0005050 | Msa0267760 | 0.802307 | 5.970894e-49 | -8.615850e-47 |
| Msa0005050 | Msa0298240 | 0.855214 | 7.329645e-62 | -8.615850e-47 |
| Msa0005050 | Msa0308830 | 0.814319 | 1.636447e-51 | -8.615850e-47 |
| Msa0005050 | Msa0322840 | 0.802188 | 6.316101e-49 | -8.615850e-47 |
| Msa0005050 | Msa0323610 | 0.819346 | 1.218549e-52 | -8.615850e-47 |
| Msa0005050 | Msa0335270 | 0.824263 | 8.872725e-54 | -8.615850e-47 |
| Msa0005050 | Msa0336090 | 0.812631 | 3.847773e-51 | -8.615850e-47 |
| Msa0005050 | Msa0337850 | 0.846786 | 1.744649e-59 | -8.615850e-47 |
| Msa0005050 | Msa0361260 | 0.818574 | 1.825806e-52 | -8.615850e-47 |
| Msa0005050 | Msa0362780 | 0.813241 | 2.828095e-51 | -8.615850e-47 |
| Msa0005050 | Msa0369570 | 0.809932 | 1.481621e-50 | -8.615850e-47 |
| Msa0005050 | Msa0370600 | 0.835530 | 1.590205e-56 | -8.615850e-47 |
| Msa0005050 | Msa0371540 | 0.813048 | 3.117676e-51 | -8.615850e-47 |
| Msa0005050 | Msa0375750 | 0.810363 | 1.196596e-50 | -8.615850e-47 |
| Msa0005050 | Msa0378500 | 0.802319 | 5.936370e-49 | -8.615850e-47 |
| Msa0005050 | Msa0402820 | 0.823818 | 1.128763e-53 | -8.615850e-47 |
| Msa0005050 | Msa0408630 | 0.806450 | 8.176270e-50 | -8.615850e-47 |
| Msa0005050 | Msa0408640 | 0.819818 | 9.511857e-53 | -8.615850e-47 |
| Msa0005050 | Msa0413930 | 0.833928 | 4.022563e-56 | -8.615850e-47 |
| Msa0005050 | Msa0418200 | 0.847418 | 1.171046e-59 | -8.615850e-47 |
| Msa0005050 | Msa0419820 | 0.801370 | 9.296662e-49 | -8.615850e-47 |
| Msa0005050 | Msa0436280 | -0.801318 | 9.529975e-49 | -8.615850e-47 |
| Msa0005050 | Msa0436460 | 0.855687 | 5.337616e-62 | -8.615850e-47 |
| Msa0005050 | Msa0436500 | 0.872407 | 3.257290e-67 | -8.615850e-47 |
| Msa0005050 | Msa0444010 | 0.801898 | 7.245552e-49 | -8.615850e-47 |
| Msa0005050 | Msa0453520 | 0.808924 | 2.438493e-50 | -8.615850e-47 |
| Msa0005050 | Msa0464540 | 0.854429 | 1.238346e-61 | -8.615850e-47 |
| Msa0005050 | Msa0464630 | 0.808546 | 2.936806e-50 | -8.615850e-47 |
| Msa0005050 | Msa0484690 | 0.816916 | 4.320335e-52 | -8.615850e-47 |
| Msa0005050 | Msa0497420 | 0.802031 | 6.804272e-49 | -8.615850e-47 |
| Msa0005050 | Msa0514860 | 0.804187 | 2.436890e-49 | -8.615850e-47 |
| Msa0005050 | Msa0517340 | 0.800483 | 1.411154e-48 | -8.615850e-47 |
| Msa0005050 | Msa0537920 | 0.866073 | 3.721179e-65 | -8.615850e-47 |
| Msa0005050 | Msa0538060 | 0.802811 | 4.698626e-49 | -8.615850e-47 |
| Msa0005050 | Msa0538220 | 0.868769 | 5.104780e-66 | -8.615850e-47 |
| Msa0005050 | Msa0538570 | 0.815794 | 7.702916e-52 | -8.615850e-47 |
| Msa0005050 | Msa0543850 | 0.824018 | 1.012936e-53 | -8.615850e-47 |
| Msa0005050 | Msa0555910 | 0.826039 | 3.374829e-54 | -8.615850e-47 |
| Msa0005050 | Msa0561510 | 0.810951 | 8.929316e-51 | -8.615850e-47 |
| Msa0005050 | Msa0585730 | 0.816441 | 5.522421e-52 | -8.615850e-47 |
| Msa0005050 | Msa0593710 | 0.804892 | 1.736898e-49 | -8.615850e-47 |
| Msa0005050 | Msa0594390 | 0.820141 | 8.024662e-53 | -8.615850e-47 |
| Msa0005050 | Msa0601110 | 0.815173 | 1.059010e-51 | -8.615850e-47 |
| Msa0005050 | Msa0601120 | 0.810325 | 1.219176e-50 | -8.615850e-47 |
| Msa0005050 | Msa0609450 | 0.812062 | 5.121730e-51 | -8.615850e-47 |
| Msa0005050 | Msa0619980 | 0.829570 | 4.780183e-55 | -8.615850e-47 |
| Msa0005050 | Msa0625890 | 0.831545 | 1.571134e-55 | -8.615850e-47 |
| Msa0005050 | Msa0633750 | 0.827838 | 1.254375e-54 | -8.615850e-47 |
| Msa0005050 | Msa0641250 | 0.822407 | 2.408875e-53 | -8.615850e-47 |
| Msa0005050 | Msa0641620 | 0.818996 | 1.463895e-52 | -8.615850e-47 |
| Msa0005050 | Msa0642650 | 0.812454 | 4.204650e-51 | -8.615850e-47 |
| Msa0005050 | Msa0647380 | 0.813128 | 2.993899e-51 | -8.615850e-47 |
| Msa0005050 | Msa0650090 | 0.806667 | 7.359758e-50 | -8.615850e-47 |
| Msa0005050 | Msa0654540 | 0.812370 | 4.387668e-51 | -8.615850e-47 |
| Msa0005050 | Msa0663590 | 0.814228 | 1.713973e-51 | -8.615850e-47 |
| Msa0005050 | Msa0663680 | 0.822492 | 2.301942e-53 | -8.615850e-47 |
| Msa0005050 | Msa0666210 | 0.805270 | 1.447938e-49 | -8.615850e-47 |
| Msa0005050 | Msa0672110 | 0.864333 | 1.311013e-64 | -8.615850e-47 |
| Msa0005050 | Msa0678860 | 0.800212 | 1.602543e-48 | -8.615850e-47 |
| Msa0005050 | Msa0678890 | 0.831500 | 1.611669e-55 | -8.615850e-47 |
| Msa0005050 | Msa0680150 | 0.851623 | 7.867607e-61 | -8.615850e-47 |
| Msa0005050 | Msa0685330 | 0.800260 | 1.566763e-48 | -8.615850e-47 |
| Msa0005050 | Msa0688500 | 0.850392 | 1.749466e-60 | -8.615850e-47 |
| Msa0005050 | Msa0690560 | 0.804582 | 2.016034e-49 | -8.615850e-47 |
| Msa0005050 | Msa0691160 | 0.816545 | 5.233198e-52 | -8.615850e-47 |
| Msa0005050 | Msa0692080 | 0.825544 | 4.425343e-54 | -8.615850e-47 |
| Msa0005050 | Msa0696620 | 0.826773 | 2.256768e-54 | -8.615850e-47 |
| Msa0005050 | Msa0703230 | 0.800200 | 1.611574e-48 | -8.615850e-47 |
| Msa0005050 | Msa0707220 | 0.842646 | 2.277029e-58 | -8.615850e-47 |
| Msa0005050 | Msa0716790 | 0.803730 | 3.031674e-49 | -8.615850e-47 |
| Msa0005050 | Msa0716800 | 0.821970 | 3.042214e-53 | -8.615850e-47 |
| Msa0005050 | Msa0720040 | 0.815108 | 1.094547e-51 | -8.615850e-47 |
| Msa0005050 | Msa0722940 | 0.806959 | 6.383719e-50 | -8.615850e-47 |
| Msa0005050 | Msa0723150 | 0.802555 | 5.307033e-49 | -8.615850e-47 |
| Msa0005050 | Msa0724340 | 0.803437 | 3.488324e-49 | -8.615850e-47 |
| Msa0005050 | Msa0739430 | 0.808417 | 3.129190e-50 | -8.615850e-47 |
| Msa0005050 | Msa0741900 | 0.826190 | 3.107827e-54 | -8.615850e-47 |
| Msa0005050 | Msa0747780 | 0.987060 | 6.495703e-169 | -8.615850e-47 |
| Msa0005050 | Msa0754030 | 0.820846 | 5.528727e-53 | -8.615850e-47 |
| Msa0005050 | Msa0755340 | 0.800632 | 1.315785e-48 | -8.615850e-47 |
| Msa0005050 | Msa0757870 | 0.843275 | 1.548937e-58 | -8.615850e-47 |
| Msa0005050 | Msa0761580 | 0.848248 | 6.918193e-60 | -8.615850e-47 |
| Msa0005050 | Msa0764820 | 0.800779 | 1.227927e-48 | -8.615850e-47 |
| Msa0005050 | Msa0770290 | 0.810808 | 9.586106e-51 | -8.615850e-47 |
| Msa0005050 | Msa0776220 | 0.810453 | 1.143855e-50 | -8.615850e-47 |
| Msa0005050 | Msa0778930 | 0.800748 | 1.245829e-48 | -8.615850e-47 |
| Msa0005050 | Msa0799210 | 0.827813 | 1.271364e-54 | -8.615850e-47 |
| Msa0005050 | Msa0807110 | 0.833262 | 5.899579e-56 | -8.615850e-47 |
| Msa0005050 | Msa0810020 | 0.805575 | 1.249526e-49 | -8.615850e-47 |
| Msa0005050 | Msa0822990 | 0.833008 | 6.824415e-56 | -8.615850e-47 |
| Msa0005050 | Msa0833040 | 0.840408 | 8.852352e-58 | -8.615850e-47 |
| Msa0005050 | Msa0842230 | 0.813400 | 2.609021e-51 | -8.615850e-47 |
| Msa0005050 | Msa0843290 | 0.804002 | 2.661773e-49 | -8.615850e-47 |
| Msa0005050 | Msa0850500 | 0.802867 | 4.575737e-49 | -8.615850e-47 |
| Msa0005050 | Msa0853320 | 0.812955 | 3.267061e-51 | -8.615850e-47 |
| Msa0005050 | Msa0862100 | 0.849647 | 2.828083e-60 | -8.615850e-47 |
| Msa0005050 | Msa0863240 | 0.822281 | 2.575784e-53 | -8.615850e-47 |
| Msa0005050 | Msa0867350 | 0.848828 | 4.779214e-60 | -8.615850e-47 |
| Msa0005050 | Msa0872310 | 0.873190 | 1.781000e-67 | -8.615850e-47 |
| Msa0005050 | Msa0873190 | 0.851468 | 8.702767e-61 | -8.615850e-47 |
| Msa0005050 | Msa0877420 | 0.802563 | 5.287552e-49 | -8.615850e-47 |
| Msa0005050 | Msa0880440 | 0.809426 | 1.903250e-50 | -8.615850e-47 |
| Msa0005050 | Msa0885060 | 0.855831 | 4.844066e-62 | -8.615850e-47 |
| Msa0005050 | Msa0898730 | 0.828186 | 1.034001e-54 | -8.615850e-47 |
| Msa0005050 | Msa0903330 | 0.813061 | 3.096714e-51 | -8.615850e-47 |
| Msa0005050 | Msa0905260 | 0.809200 | 2.128221e-50 | -8.615850e-47 |
| Msa0005050 | Msa0905550 | 0.894321 | 2.753543e-75 | -8.615850e-47 |
| Msa0005050 | Msa0906370 | 0.863902 | 1.786722e-64 | -8.615850e-47 |
| Msa0005050 | Msa0911990 | 0.826172 | 3.138272e-54 | -8.615850e-47 |
| Msa0005050 | Msa0930780 | 0.813392 | 2.619481e-51 | -8.615850e-47 |
| Msa0005050 | Msa0931480 | 0.813761 | 2.173698e-51 | -8.615850e-47 |
| Msa0005050 | Msa0937550 | 0.899023 | 2.984712e-77 | -8.615850e-47 |
| Msa0005050 | Msa0938430 | 0.836997 | 6.738712e-57 | -8.615850e-47 |
| Msa0005050 | Msa0942730 | 0.800607 | 1.331073e-48 | -8.615850e-47 |
| Msa0005050 | Msa0951460 | 0.801517 | 8.676288e-49 | -8.615850e-47 |
| Msa0005050 | Msa0974530 | 0.802173 | 6.360732e-49 | -8.615850e-47 |
| Msa0005050 | Msa0974750 | 0.856469 | 3.149958e-62 | -8.615850e-47 |
| Msa0005050 | Msa0975580 | 0.834328 | 3.193213e-56 | -8.615850e-47 |
| Msa0005050 | Msa1004500 | 0.819908 | 9.070168e-53 | -8.615850e-47 |
| Msa0005050 | Msa1004520 | 0.815291 | 9.968144e-52 | -8.615850e-47 |
| Msa0005050 | Msa1007350 | 0.816256 | 6.073953e-52 | -8.615850e-47 |
| Msa0005050 | Msa1012810 | 0.841214 | 5.441911e-58 | -8.615850e-47 |
| Msa0005050 | Msa1014270 | 0.841976 | 3.427885e-58 | -8.615850e-47 |
| Msa0005050 | Msa1018790 | 0.839801 | 1.274825e-57 | -8.615850e-47 |
| Msa0005050 | Msa1022650 | 0.821906 | 3.146833e-53 | -8.615850e-47 |
| Msa0005050 | Msa1032450 | 0.813571 | 2.392415e-51 | -8.615850e-47 |
| Msa0005050 | Msa1033560 | 0.860807 | 1.596527e-63 | -8.615850e-47 |
| Msa0005050 | Msa1037900 | 0.824259 | 8.893217e-54 | -8.615850e-47 |
| Msa0005050 | Msa1041530 | 0.875906 | 2.129456e-68 | -8.615850e-47 |
| Msa0005050 | Msa1042670 | 0.809169 | 2.160849e-50 | -8.615850e-47 |
| Msa0005050 | Msa1044340 | 0.807253 | 5.532116e-50 | -8.615850e-47 |
| Msa0005050 | Msa1045780 | 0.803448 | 3.469215e-49 | -8.615850e-47 |
| Msa0005050 | Msa1045880 | 0.813140 | 2.975354e-51 | -8.615850e-47 |
| Msa0005050 | Msa1045970 | 0.810039 | 1.405451e-50 | -8.615850e-47 |
| Msa0005050 | Msa1046870 | 0.818624 | 1.778916e-52 | -8.615850e-47 |
| Msa0005050 | Msa1048710 | 0.803295 | 3.732322e-49 | -8.615850e-47 |
| Msa0005050 | Msa1054240 | 0.808001 | 3.837249e-50 | -8.615850e-47 |
| Msa0005050 | Msa1055260 | 0.844503 | 7.261943e-59 | -8.615850e-47 |
| Msa0005050 | Msa1055280 | 0.831481 | 1.629440e-55 | -8.615850e-47 |
| Msa0005050 | Msa1055500 | 0.809730 | 1.637925e-50 | -8.615850e-47 |
| Msa0005050 | Msa1061500 | 0.834059 | 3.731122e-56 | -8.615850e-47 |
| Msa0005050 | Msa1066490 | 0.801514 | 8.687731e-49 | -8.615850e-47 |
| Msa0005050 | Msa1073340 | 0.811808 | 5.815975e-51 | -8.615850e-47 |
| Msa0005050 | Msa1078710 | 0.804130 | 2.503956e-49 | -8.615850e-47 |
| Msa0005050 | Msa1081570 | 0.876273 | 1.591604e-68 | -8.615850e-47 |
| Msa0005050 | Msa1095470 | 0.824997 | 5.958119e-54 | -8.615850e-47 |
| Msa0005050 | Msa1106810 | 0.843592 | 1.274605e-58 | -8.615850e-47 |
| Msa0005050 | Msa1107440 | 0.803582 | 3.254711e-49 | -8.615850e-47 |
| Msa0005050 | Msa1113850 | 0.846524 | 2.057756e-59 | -8.615850e-47 |
| Msa0005050 | Msa1123880 | 0.847036 | 1.491150e-59 | -8.615850e-47 |
| Msa0005050 | Msa1126510 | 0.806807 | 6.876650e-50 | -8.615850e-47 |
| Msa0005050 | Msa1127140 | 0.880983 | 3.500112e-70 | -8.615850e-47 |
| Msa0005050 | Msa1127950 | 0.804383 | 2.217948e-49 | -8.615850e-47 |
| Msa0005050 | Msa1129960 | 0.835783 | 1.372141e-56 | -8.615850e-47 |
| Msa0005050 | Msa1129970 | 0.803208 | 3.889570e-49 | -8.615850e-47 |
| Msa0005050 | Msa1133710 | 0.806185 | 9.302181e-50 | -8.615850e-47 |
| Msa0005050 | Msa1134110 | 0.835642 | 1.490340e-56 | -8.615850e-47 |
| Msa0005050 | Msa1134400 | 0.814874 | 1.233360e-51 | -8.615850e-47 |
| Msa0005050 | Msa1135690 | 0.831392 | 1.713259e-55 | -8.615850e-47 |
| Msa0005050 | Msa1139810 | 0.818604 | 1.797634e-52 | -8.615850e-47 |
| Msa0005050 | Msa1145020 | 0.847958 | 8.318940e-60 | -8.615850e-47 |
| Msa0005050 | Msa1150230 | 0.809360 | 1.966931e-50 | -8.615850e-47 |
| Msa0005050 | Msa1150970 | 0.813379 | 2.637213e-51 | -8.615850e-47 |
| Msa0005050 | Msa1159100 | 0.803118 | 4.059661e-49 | -8.615850e-47 |
| Msa0005050 | Msa1160400 | 0.818390 | 2.010025e-52 | -8.615850e-47 |
| Msa0005050 | Msa1166400 | 0.873992 | 9.564315e-68 | -8.615850e-47 |
| Msa0005050 | Msa1169990 | 0.827031 | 1.958083e-54 | -8.615850e-47 |
| Msa0005050 | Msa1176160 | 0.852008 | 6.118971e-61 | -8.615850e-47 |
| Msa0005050 | Msa1186830 | 0.823822 | 1.126369e-53 | -8.615850e-47 |
| Msa0005050 | Msa1197110 | 0.807567 | 4.746117e-50 | -8.615850e-47 |
| Msa0005050 | Msa1201160 | 0.800619 | 1.323986e-48 | -8.615850e-47 |
| Msa0005050 | Msa1211090 | 0.801666 | 8.085857e-49 | -8.615850e-47 |
| Msa0005050 | Msa1226620 | 0.803113 | 4.070067e-49 | -8.615850e-47 |
| Msa0005050 | Msa1227950 | 0.809154 | 2.176819e-50 | -8.615850e-47 |
| Msa0005050 | Msa1228610 | 0.833934 | 4.009963e-56 | -8.615850e-47 |
| Msa0005050 | Msa1229700 | 0.822534 | 2.250459e-53 | -8.615850e-47 |
| Msa0005050 | Msa1249870 | 0.843839 | 1.094936e-58 | -8.615850e-47 |
| Msa0005050 | Msa1272330 | 0.862047 | 6.683230e-64 | -8.615850e-47 |
| Msa0005050 | Msa1305510 | 0.822530 | 2.255273e-53 | -8.615850e-47 |
| Msa0005050 | Msa1307190 | 0.830799 | 2.395696e-55 | -8.615850e-47 |
| Msa0005050 | Msa1310290 | 0.822016 | 2.968294e-53 | -8.615850e-47 |
| Msa0005050 | Msa1321000 | 0.801627 | 8.236187e-49 | -8.615850e-47 |
| Msa0005050 | Msa1351760 | 0.812122 | 4.968368e-51 | -8.615850e-47 |
| Msa0005050 | Msa1355400 | 0.840823 | 6.894838e-58 | -8.615850e-47 |
| Msa0005050 | Msa1365200 | 0.814897 | 1.219280e-51 | -8.615850e-47 |
| Msa0005050 | Msa1365320 | 0.817987 | 2.478998e-52 | -8.615850e-47 |
| Msa0005050 | Msa1374440 | 0.819015 | 1.449562e-52 | -8.615850e-47 |
| Msa0005050 | Msa1375940 | 0.833351 | 5.606683e-56 | -8.615850e-47 |
| Msa0005050 | Msa1379990 | 0.856117 | 3.995604e-62 | -8.615850e-47 |
| Msa0005050 | Msa1382310 | 0.810507 | 1.113604e-50 | -8.615850e-47 |
| Msa0005050 | Msa1390310 | 0.818764 | 1.652837e-52 | -8.615850e-47 |
| Msa0005050 | Msa1391590 | 0.842250 | 2.900622e-58 | -8.615850e-47 |
| Msa0005050 | Msa1406040 | 0.800081 | 1.703675e-48 | -8.615850e-47 |
| Msa0005050 | Msa1408870 | 0.834391 | 3.079083e-56 | -8.615850e-47 |
| Msa0005050 | Msa1414930 | 0.835661 | 1.473905e-56 | -8.615850e-47 |
| Msa0005050 | Msa1420060 | 0.891364 | 4.250083e-74 | -8.615850e-47 |
| Msa0005050 | Msa1421550 | 0.836633 | 8.346602e-57 | -8.615850e-47 |
| Msa0005050 | Msa1422270 | 0.809859 | 1.536402e-50 | -8.615850e-47 |
| Msa0005050 | Msa1429360 | -0.800507 | 1.395080e-48 | -8.615850e-47 |
| Msa0005050 | Msa1429420 | 0.815347 | 9.685261e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0005050 | MtrunA17_Chr1g0151681 | 97.175 | 531 | 8 | 1 | 1 | 531 | 1 | 524 | 0.0 | 1061 |
| Msa0005050 | MtrunA17_Chr4g0025521 | 35.739 | 291 | 157 | 7 | 250 | 523 | 217 | 494 | 7.06e-48 | 177 |
| Msa0005050 | MtrunA17_Chr3g0141941 | 38.462 | 260 | 150 | 5 | 247 | 500 | 159 | 414 | 1.44e-44 | 164 |
| Msa0005050 | MtrunA17_Chr1g0155681 | 37.548 | 261 | 144 | 5 | 252 | 500 | 172 | 425 | 7.96e-44 | 164 |
| Msa0005050 | MtrunA17_Chr7g0267481 | 43.005 | 193 | 96 | 4 | 318 | 500 | 239 | 427 | 5.04e-43 | 162 |
| Msa0005050 | MtrunA17_Chr8g0373801 | 38.739 | 222 | 120 | 5 | 306 | 517 | 447 | 662 | 1.00e-41 | 160 |
| Msa0005050 | MtrunA17_Chr1g0177751 | 35.915 | 284 | 152 | 5 | 251 | 517 | 162 | 432 | 2.98e-41 | 157 |
| Msa0005050 | MtrunA17_Chr3g0141931 | 36.842 | 266 | 146 | 7 | 247 | 500 | 162 | 417 | 6.92e-41 | 153 |
| Msa0005050 | MtrunA17_Chr5g0403251 | 38.739 | 222 | 117 | 6 | 306 | 518 | 394 | 605 | 2.98e-40 | 155 |
| Msa0005050 | MtrunA17_Chr8g0387321 | 41.899 | 179 | 95 | 4 | 325 | 494 | 254 | 432 | 5.76e-39 | 150 |
| Msa0005050 | MtrunA17_Chr4g0008591 | 31.541 | 279 | 167 | 7 | 247 | 522 | 193 | 450 | 4.47e-37 | 144 |
| Msa0005050 | MtrunA17_Chr7g0240371 | 37.624 | 202 | 117 | 5 | 329 | 525 | 200 | 397 | 1.75e-36 | 142 |
| Msa0005050 | MtrunA17_Chr4g0028701 | 29.755 | 326 | 185 | 8 | 247 | 528 | 242 | 567 | 3.46e-35 | 140 |
| Msa0005050 | MtrunA17_Chr2g0327021 | 36.923 | 195 | 105 | 3 | 322 | 498 | 312 | 506 | 1.02e-33 | 135 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0005050 | AT4G32980.1 | 58.228 | 316 | 110 | 6 | 191 | 505 | 152 | 446 | 3.09e-110 | 337 |
| Msa0005050 | AT4G32980.2 | 58.228 | 316 | 110 | 6 | 191 | 505 | 152 | 446 | 3.09e-110 | 337 |
| Msa0005050 | AT2G16400.1 | 36.918 | 279 | 149 | 7 | 247 | 517 | 111 | 370 | 2.24e-43 | 161 |
| Msa0005050 | AT2G27220.1 | 41.622 | 185 | 82 | 5 | 324 | 500 | 131 | 297 | 5.18e-42 | 156 |
| Msa0005050 | AT2G27220.3 | 41.622 | 185 | 82 | 5 | 324 | 500 | 131 | 297 | 5.18e-42 | 156 |
| Msa0005050 | AT1G19700.1 | 34.799 | 273 | 145 | 7 | 247 | 500 | 162 | 420 | 7.01e-42 | 158 |
| Msa0005050 | AT1G19700.3 | 34.799 | 273 | 145 | 7 | 247 | 500 | 162 | 420 | 7.01e-42 | 158 |
| Msa0005050 | AT1G19700.5 | 34.799 | 273 | 145 | 7 | 247 | 500 | 162 | 420 | 7.01e-42 | 158 |
| Msa0005050 | AT1G19700.4 | 34.799 | 273 | 145 | 7 | 247 | 500 | 162 | 420 | 7.01e-42 | 158 |
| Msa0005050 | AT1G19700.2 | 34.799 | 273 | 145 | 7 | 247 | 500 | 162 | 420 | 7.01e-42 | 158 |
| Msa0005050 | AT4G34610.2 | 32.873 | 362 | 199 | 12 | 149 | 500 | 56 | 383 | 1.21e-41 | 157 |
| Msa0005050 | AT4G34610.4 | 32.873 | 362 | 199 | 12 | 149 | 500 | 56 | 383 | 1.21e-41 | 157 |
| Msa0005050 | AT4G34610.3 | 32.873 | 362 | 199 | 12 | 149 | 500 | 56 | 383 | 1.21e-41 | 157 |
| Msa0005050 | AT4G34610.1 | 32.873 | 362 | 199 | 12 | 149 | 500 | 56 | 383 | 1.21e-41 | 157 |
| Msa0005050 | AT1G75410.1 | 35.632 | 261 | 152 | 6 | 247 | 500 | 164 | 415 | 2.47e-41 | 156 |
| Msa0005050 | AT1G75410.2 | 35.632 | 261 | 152 | 6 | 247 | 500 | 164 | 415 | 2.47e-41 | 156 |
| Msa0005050 | AT2G27220.2 | 42.941 | 170 | 71 | 5 | 339 | 500 | 164 | 315 | 1.77e-38 | 147 |
| Msa0005050 | AT1G75430.1 | 40.314 | 191 | 99 | 3 | 323 | 500 | 83 | 271 | 4.94e-38 | 141 |
| Msa0005050 | AT4G36870.2 | 36.538 | 208 | 114 | 4 | 305 | 500 | 366 | 567 | 2.56e-37 | 147 |
| Msa0005050 | AT4G36870.1 | 36.538 | 208 | 114 | 4 | 305 | 500 | 366 | 567 | 2.56e-37 | 147 |
| Msa0005050 | AT2G23760.2 | 37.255 | 204 | 110 | 4 | 307 | 498 | 294 | 491 | 4.80e-36 | 142 |
| Msa0005050 | AT2G23760.1 | 37.255 | 204 | 110 | 4 | 307 | 498 | 294 | 491 | 4.80e-36 | 142 |
| Msa0005050 | AT2G23760.3 | 37.255 | 204 | 110 | 4 | 307 | 498 | 294 | 491 | 4.80e-36 | 142 |
| Msa0005050 | AT5G41410.1 | 39.899 | 198 | 105 | 5 | 319 | 503 | 267 | 463 | 2.36e-35 | 140 |
| Msa0005050 | AT2G27990.1 | 40.462 | 173 | 99 | 3 | 328 | 499 | 323 | 492 | 1.68e-34 | 137 |
| Msa0005050 | AT2G35940.3 | 29.064 | 406 | 239 | 10 | 126 | 492 | 51 | 446 | 6.63e-34 | 136 |
| Msa0005050 | AT2G35940.1 | 29.064 | 406 | 239 | 10 | 126 | 492 | 51 | 446 | 6.63e-34 | 136 |
| Msa0005050 | AT2G35940.2 | 29.064 | 406 | 239 | 10 | 126 | 492 | 51 | 446 | 6.63e-34 | 136 |
| Msa0005050 | AT5G02030.1 | 36.813 | 182 | 100 | 3 | 332 | 498 | 234 | 415 | 1.14e-29 | 123 |
| Msa0005050 | AT2G23760.4 | 29.688 | 256 | 110 | 5 | 307 | 498 | 294 | 543 | 1.11e-27 | 117 |
| Msa0005050 | AT1G75410.3 | 30.962 | 239 | 149 | 6 | 247 | 478 | 164 | 393 | 9.53e-26 | 109 |
| Msa0005050 | AT4G36870.4 | 31.551 | 187 | 110 | 4 | 305 | 479 | 366 | 546 | 9.97e-23 | 102 |
| Msa0005050 | AT4G36870.3 | 30.811 | 185 | 110 | 4 | 305 | 477 | 366 | 544 | 1.08e-21 | 99.0 |
| Msa0005050 | AT1G75430.2 | 31.081 | 148 | 87 | 3 | 323 | 457 | 83 | 228 | 1.52e-13 | 71.6 |
| Msa0005050 | AT2G27990.2 | 32.824 | 131 | 84 | 3 | 328 | 457 | 323 | 450 | 1.08e-12 | 70.5 |
Find 97 sgRNAs with CRISPR-Local
Find 183 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAATATCTTGCTATTAATTT+TGG | 0.094031 | 1_1:-7489180 | Msa0005050:three_prime_UTR |
| TTCCATACATATTCAATAAT+TGG | 0.188620 | 1_1:-7491601 | Msa0005050:CDS |
| AATGGAATTCCAATACTTTC+TGG | 0.223215 | 1_1:-7491806 | Msa0005050:CDS |
| ATCTTTCTGGCAAGCCCCTT+TGG | 0.227378 | 1_1:+7490053 | None:intergenic |
| AACCAAAACAACATCATAAA+TGG | 0.230798 | 1_1:-7491824 | Msa0005050:CDS |
| ATGGAACTTTCTATGAGTTT+AGG | 0.232674 | 1_1:-7491248 | Msa0005050:CDS |
| TCTTTCTGGCAAGCCCCTTT+GGG | 0.243439 | 1_1:+7490054 | None:intergenic |
| AAATGCTTCTCTGCATCTTT+AGG | 0.274049 | 1_1:+7489746 | None:intergenic |
| TCTTGATGAGATAAACTATT+CGG | 0.288114 | 1_1:-7491123 | Msa0005050:CDS |
| TTCCATTTATGATGTTGTTT+TGG | 0.288436 | 1_1:+7491822 | None:intergenic |
| TGGAACTTTCTATGAGTTTA+GGG | 0.292728 | 1_1:-7491247 | Msa0005050:CDS |
| AACGGTTTCTCGACTATATA+AGG | 0.297571 | 1_1:-7490233 | Msa0005050:CDS |
| CTGTTTCCGTTCTACGTGAT+TGG | 0.305984 | 1_1:-7490030 | Msa0005050:CDS |
| AACCCCTTGTGTGCAACTTT+TGG | 0.320504 | 1_1:-7491560 | Msa0005050:CDS |
| TATTCGGGTTCTGGTGTTAG+AGG | 0.338538 | 1_1:-7491107 | Msa0005050:CDS |
| GAGATAAACTATTCGGGTTC+TGG | 0.339602 | 1_1:-7491116 | Msa0005050:CDS |
| ACAAGCCTCATGTAGTAGTA+TGG | 0.375487 | 1_1:-7491267 | Msa0005050:CDS |
| GAATGGAACAAGATCGGGTT+TGG | 0.377735 | 1_1:-7491291 | Msa0005050:CDS |
| TTTGATGATTGCCATCCATT+TGG | 0.383458 | 1_1:+7491443 | None:intergenic |
| AAGATACCTTGCTGTAATTC+AGG | 0.388861 | 1_1:-7491183 | Msa0005050:CDS |
| GGTTTATAAATGCGCGTGTT+CGG | 0.404462 | 1_1:-7489357 | Msa0005050:CDS |
| AAGTTCATTGCTACAATTTG+AGG | 0.409458 | 1_1:+7491388 | None:intergenic |
| CTTGATGAGATAAACTATTC+GGG | 0.413238 | 1_1:-7491122 | Msa0005050:CDS |
| AGAACGGAAACAGATCTTTC+TGG | 0.415143 | 1_1:+7490040 | None:intergenic |
| AGCTCTGTTTGATTTATGTA+AGG | 0.420611 | 1_1:-7492135 | Msa0005050:five_prime_UTR |
| TAAATGCGCGTGTTCGGCTA+TGG | 0.423300 | 1_1:-7489351 | Msa0005050:CDS |
| TTCATTCATTCAAAAGCAAT+GGG | 0.425095 | 1_1:-7490116 | Msa0005050:CDS |
| TTCCTATGCTTATTAAGATA+AGG | 0.425691 | 1_1:-7492112 | Msa0005050:intron |
| TATCTTGATCCTAATATTGC+CGG | 0.425897 | 1_1:+7491200 | None:intergenic |
| TGCCAATTATTGAATATGTA+TGG | 0.427184 | 1_1:+7491599 | None:intergenic |
| GCATACATTTCCTCAATCAA+TGG | 0.431572 | 1_1:+7489325 | None:intergenic |
| AAATGTTTAATATGAATTGA+AGG | 0.435021 | 1_1:-7489222 | Msa0005050:exon |
| CTTGCAACATCACCAACTTC+AGG | 0.442716 | 1_1:-7491356 | Msa0005050:CDS |
| TAGCAAACATATTCTTTCCA+TGG | 0.443732 | 1_1:-7490194 | Msa0005050:CDS |
| GGGCTCTTCAACAGTTGAAA+AGG | 0.453231 | 1_1:-7490096 | Msa0005050:CDS |
| CAGTCAATATAGTCAATGTT+TGG | 0.454449 | 1_1:-7490335 | Msa0005050:CDS |
| TTATTAACAATGAGATTTGA+GGG | 0.454533 | 1_1:+7491680 | None:intergenic |
| TGCACACTTTGCTGTCAAAA+CGG | 0.454758 | 1_1:-7490251 | Msa0005050:CDS |
| TGAAAAGGAAAGATCAGTTA+TGG | 0.458634 | 1_1:-7490081 | Msa0005050:CDS |
| GTTATTAACAATGAGATTTG+AGG | 0.462088 | 1_1:+7491679 | None:intergenic |
| CTTCATTCATTCAAAAGCAA+TGG | 0.463764 | 1_1:-7490117 | Msa0005050:CDS |
| TGTTCTCCACCAGAAAGTAT+TGG | 0.466176 | 1_1:+7491797 | None:intergenic |
| GCAAAGTGTGCATGTATTTG+TGG | 0.466187 | 1_1:+7490262 | None:intergenic |
| AGCATGAATGGAACAAGATC+GGG | 0.483225 | 1_1:-7491296 | Msa0005050:CDS |
| AAAGCTCAAGAGAGTAATGT+TGG | 0.486264 | 1_1:-7491506 | Msa0005050:CDS |
| ATTTATTCCTATCCTTCGCT+TGG | 0.489525 | 1_1:+7491052 | None:intergenic |
| TTCATGGTCAGAAGAGGATA+AGG | 0.491594 | 1_1:-7490155 | Msa0005050:CDS |
| AGCAAACATATTCTTTCCAT+GGG | 0.494717 | 1_1:-7490193 | Msa0005050:CDS |
| ACTGTTAAAATTTGATCCCA+TGG | 0.497477 | 1_1:+7490177 | None:intergenic |
| AATCAAACAGAGCTACCATA+TGG | 0.497678 | 1_1:+7492144 | None:intergenic |
| GACTTAACTCATAGCATGAA+TGG | 0.499550 | 1_1:-7491308 | Msa0005050:CDS |
| ATGAGAGCAGTGAAAGAAGC+AGG | 0.499804 | 1_1:-7489261 | Msa0005050:CDS |
| GGTTCTGGTGTTAGAGGCCG+AGG | 0.503924 | 1_1:-7491101 | Msa0005050:CDS |
| TGGTTGTGTAGGTATCAAAC+TGG | 0.504145 | 1_1:-7489378 | Msa0005050:intron |
| AAGTGGGTTGACTAGAAGTC+AGG | 0.504398 | 1_1:-7489711 | Msa0005050:intron |
| AACAAATGAATTATCAGCTA+TGG | 0.505083 | 1_1:+7491736 | None:intergenic |
| TCTTGAAGACCAATTCTAGC+AGG | 0.505334 | 1_1:+7491641 | None:intergenic |
| AGAAAAGCTTGTCGAAATGA+AGG | 0.508701 | 1_1:-7489289 | Msa0005050:CDS |
| ATCAGTTATGGAGGCCCCAA+AGG | 0.509828 | 1_1:-7490069 | Msa0005050:CDS |
| CTTTCTGGCAAGCCCCTTTG+GGG | 0.514861 | 1_1:+7490055 | None:intergenic |
| TCAGTTATGGAGGCCCCAAA+GGG | 0.515348 | 1_1:-7490068 | Msa0005050:CDS |
| TCAGCATAAGCTTCTGACAT+AGG | 0.527852 | 1_1:+7491017 | None:intergenic |
| TCATGTCATATTCGCCGATA+GGG | 0.529853 | 1_1:-7491475 | Msa0005050:CDS |
| ATAGGGAACATCGATCCAAA+TGG | 0.530007 | 1_1:-7491458 | Msa0005050:CDS |
| TAGCATGAATGGAACAAGAT+CGG | 0.530199 | 1_1:-7491297 | Msa0005050:CDS |
| ACAAAGTTGATTTATTTCCT+CGG | 0.530630 | 1_1:+7491084 | None:intergenic |
| GGTCAATGCTCAGAGATTAG+TGG | 0.536668 | 1_1:-7491335 | Msa0005050:CDS |
| ATGCTGATTCTTCATTGCAA+AGG | 0.542693 | 1_1:-7491001 | Msa0005050:CDS |
| GCTATGGAAACCATTGATTG+AGG | 0.555071 | 1_1:-7489335 | Msa0005050:CDS |
| ATCACCAAAAGTTGCACACA+AGG | 0.561105 | 1_1:+7491556 | None:intergenic |
| TTCTAGGTTCTCATAGGACA+AGG | 0.562928 | 1_1:-7492242 | Msa0005050:intron |
| ATATATGTAAAAGTTCCATA+TGG | 0.565255 | 1_1:-7492159 | Msa0005050:five_prime_UTR |
| TCTGAGCATTGACCTGAAGT+TGG | 0.571861 | 1_1:+7491344 | None:intergenic |
| CACCAAAAGTTGCACACAAG+GGG | 0.572833 | 1_1:+7491558 | None:intergenic |
| TAACAGTTCATGGTCAGAAG+AGG | 0.576067 | 1_1:-7490161 | Msa0005050:CDS |
| GGAATTCCAATACTTTCTGG+TGG | 0.576914 | 1_1:-7491803 | Msa0005050:CDS |
| ACTCTTGATGCTTCTACAGA+TGG | 0.577737 | 1_1:-7490952 | Msa0005050:intron |
| ACTGCTCAAATGAACATGGC+TGG | 0.584941 | 1_1:-7491926 | Msa0005050:CDS |
| AACACAACCAAGCGAAGGAT+AGG | 0.588145 | 1_1:-7491059 | Msa0005050:CDS |
| TTGTTACATCACAACATGGA+AGG | 0.589701 | 1_1:-7491718 | Msa0005050:CDS |
| AATGAATAGCAATGAATGAG+TGG | 0.594918 | 1_1:+7491857 | None:intergenic |
| AAACATCCAATCACGTAGAA+CGG | 0.600137 | 1_1:+7490024 | None:intergenic |
| TTCATGTCATATTCGCCGAT+AGG | 0.602007 | 1_1:-7491476 | Msa0005050:CDS |
| ACAACATGGAAGGACTATTG+TGG | 0.614360 | 1_1:-7491708 | Msa0005050:CDS |
| TTTGGATCGATGTTCCCTAT+CGG | 0.616890 | 1_1:+7491461 | None:intergenic |
| TAGATAATACTTACGGATGG+AGG | 0.617974 | 1_1:+7489993 | None:intergenic |
| TATATAAGGACTTGAGAGAG+AGG | 0.620065 | 1_1:-7490219 | Msa0005050:CDS |
| AAGTTCCATACTACTACATG+AGG | 0.620943 | 1_1:+7491262 | None:intergenic |
| GGAACATCGATCCAAATGGA+TGG | 0.633164 | 1_1:-7491454 | Msa0005050:CDS |
| AACCTTATCTTAATAAGCAT+AGG | 0.641134 | 1_1:+7492110 | None:intergenic |
| TCACCAAAAGTTGCACACAA+GGG | 0.650888 | 1_1:+7491557 | None:intergenic |
| TCATTTGTTACATCACAACA+TGG | 0.664816 | 1_1:-7491722 | Msa0005050:CDS |
| AAAGGAAAGATCAGTTATGG+AGG | 0.667219 | 1_1:-7490078 | Msa0005050:CDS |
| TGTCGAACACAACCAAGCGA+AGG | 0.672572 | 1_1:-7491064 | Msa0005050:CDS |
| GTACACTGCTCAAATGAACA+TGG | 0.673477 | 1_1:-7491930 | Msa0005050:CDS |
| GTATTTCCTGAATTACAGCA+AGG | 0.683112 | 1_1:+7491177 | None:intergenic |
| CAGTTATGGAGGCCCCAAAG+GGG | 0.731077 | 1_1:-7490067 | Msa0005050:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATTTAAAAATGTGCTTT+TGG | - | chr1_1:7489308-7489327 | Msa0005050:CDS | 15.0% |
| !!! | TTTTCTAATTGTTTTCTAAA+TGG | - | chr1_1:7489800-7489819 | Msa0005050:intron | 15.0% |
| !! | TGAATTTAATGTAATCTAAA+TGG | + | chr1_1:7490848-7490867 | None:intergenic | 15.0% |
| !!! | TAACCAAAGTTTTAATATAA+AGG | - | chr1_1:7491805-7491824 | Msa0005050:CDS | 15.0% |
| !! | GATCTTATTATTATAGATAA+AGG | + | chr1_1:7491948-7491967 | None:intergenic | 15.0% |
| !!! | TAATAACTTTTATACGATAA+GGG | + | chr1_1:7492323-7492342 | None:intergenic | 15.0% |
| !!! | TTAATAACTTTTATACGATA+AGG | + | chr1_1:7492324-7492343 | None:intergenic | 15.0% |
| !! | AAATGTTTAATATGAATTGA+AGG | - | chr1_1:7492541-7492560 | Msa0005050:intron | 15.0% |
| !!! | TAATATCTTGCTATTAATTT+TGG | - | chr1_1:7492583-7492602 | Msa0005050:intron | 15.0% |
| !!! | TGAGGTGAATTTTTTTTATA+TGG | - | chr1_1:7489195-7489214 | Msa0005050:three_prime_UTR | 20.0% |
| !! | ACTATACAATAAATCTTGAT+GGG | - | chr1_1:7489278-7489297 | Msa0005050:CDS | 20.0% |
| !!! | GATTAGAGTATCATTAAATT+TGG | + | chr1_1:7489461-7489480 | None:intergenic | 20.0% |
| !! | ATATATGTAAAAGTTCCATA+TGG | - | chr1_1:7489604-7489623 | Msa0005050:intron | 20.0% |
| !!! | ACAAGAACAATTTTAAGATA+AGG | + | chr1_1:7489720-7489739 | None:intergenic | 20.0% |
| !! | AGAAAATAGACTTAGAAAAA+TGG | + | chr1_1:7489764-7489783 | None:intergenic | 20.0% |
| !! | TTATTAACAATGAGATTTGA+GGG | + | chr1_1:7490086-7490105 | None:intergenic | 20.0% |
| !! | TTCCATACATATTCAATAAT+TGG | - | chr1_1:7490162-7490181 | Msa0005050:CDS | 20.0% |
| !!! | CATGTAAATTGATTTATGTT+TGG | + | chr1_1:7491060-7491079 | None:intergenic | 20.0% |
| !!! | ACTTTTCCAAGTAAAATTTA+TGG | - | chr1_1:7491184-7491203 | Msa0005050:CDS | 20.0% |
| !! | TCGATTATAGATAATACTTA+CGG | + | chr1_1:7491780-7491799 | None:intergenic | 20.0% |
| !! | AGACCTTTATATTAAAACTT+TGG | + | chr1_1:7491811-7491830 | None:intergenic | 20.0% |
| !! | ATTTACTTGCAATAAAAAGT+GGG | - | chr1_1:7492036-7492055 | Msa0005050:intron | 20.0% |
| !!! | TTAAAACTGATTTTGGTATT+TGG | - | chr1_1:7492164-7492183 | Msa0005050:five_prime_UTR | 20.0% |
| !! | TTTCAACTGATAAATAATCT+TGG | + | chr1_1:7492221-7492240 | None:intergenic | 20.0% |
| !! | AGTGATTAGAGTTATATTTA+TGG | - | chr1_1:7492361-7492380 | Msa0005050:intron | 20.0% |
| !! | ATTAGAGTTATATTTATGGT+TGG | - | chr1_1:7492365-7492384 | Msa0005050:intron | 20.0% |
| ! | CACTATACAATAAATCTTGA+TGG | - | chr1_1:7489277-7489296 | Msa0005050:CDS | 25.0% |
| ! | AAAGCAACATGAAAAACAAA+AGG | + | chr1_1:7489495-7489514 | None:intergenic | 25.0% |
| ! | AAGAAGTTGTCAAAAATGTT+TGG | - | chr1_1:7489561-7489580 | Msa0005050:intron | 25.0% |
| ! | TTCCTATGCTTATTAAGATA+AGG | - | chr1_1:7489651-7489670 | Msa0005050:intron | 25.0% |
| ! | AACCTTATCTTAATAAGCAT+AGG | + | chr1_1:7489656-7489675 | None:intergenic | 25.0% |
| ! | TATGCTTATTAAGATAAGGT+TGG | - | chr1_1:7489655-7489674 | Msa0005050:intron | 25.0% |
| ! | AACCAAAACAACATCATAAA+TGG | - | chr1_1:7489939-7489958 | Msa0005050:intron | 25.0% |
| !!! | TTCCATTTATGATGTTGTTT+TGG | + | chr1_1:7489944-7489963 | None:intergenic | 25.0% |
| ! | AACAAATGAATTATCAGCTA+TGG | + | chr1_1:7490030-7490049 | None:intergenic | 25.0% |
| ! | GTTATTAACAATGAGATTTG+AGG | + | chr1_1:7490087-7490106 | None:intergenic | 25.0% |
| ! | TGCCAATTATTGAATATGTA+TGG | + | chr1_1:7490167-7490186 | None:intergenic | 25.0% |
| ! | TCTTGATGAGATAAACTATT+CGG | - | chr1_1:7490640-7490659 | Msa0005050:intron | 25.0% |
| !! | ACAAAGTTGATTTATTTCCT+CGG | + | chr1_1:7490682-7490701 | None:intergenic | 25.0% |
| ! | TTGATTTCTGATGTTTAGAA+TGG | - | chr1_1:7490946-7490965 | Msa0005050:intron | 25.0% |
| !!! | AGAATGGATTTTGACATTTT+TGG | - | chr1_1:7490962-7490981 | Msa0005050:CDS | 25.0% |
| ! | TTCCAAGTAAAATTTATGGA+TGG | - | chr1_1:7491188-7491207 | Msa0005050:CDS | 25.0% |
| !! | AACCATCCATAAATTTTACT+TGG | + | chr1_1:7491193-7491212 | None:intergenic | 25.0% |
| !!! | TAGTAGTCTTTATTTTACTC+AGG | - | chr1_1:7491401-7491420 | Msa0005050:CDS | 25.0% |
| !!! | GATCAAATTTTAACAGTTCA+TGG | - | chr1_1:7491592-7491611 | Msa0005050:CDS | 25.0% |
| ! | TTCATTCATTCAAAAGCAAT+GGG | - | chr1_1:7491647-7491666 | Msa0005050:CDS | 25.0% |
| ! | TTATAGATAATACTTACGGA+TGG | + | chr1_1:7491776-7491795 | None:intergenic | 25.0% |
| ! | CATTTACTTGCAATAAAAAG+TGG | - | chr1_1:7492035-7492054 | Msa0005050:intron | 25.0% |
| !!! | GTCACATACATATTTTGATT+TGG | - | chr1_1:7492084-7492103 | Msa0005050:intron | 25.0% |
| ! | ATTTATCAGTTGAAAACATG+TGG | - | chr1_1:7492226-7492245 | Msa0005050:five_prime_UTR | 25.0% |
| !!! | CAATGCTTTTGTTATTCTTG+AGG | - | chr1_1:7489177-7489196 | Msa0005050:three_prime_UTR | 30.0% |
| ! | TTTGAGCTTTTTGTGTGTAT+TGG | - | chr1_1:7489233-7489252 | Msa0005050:CDS | 30.0% |
| TATTGGAGTTGAGAAATGAA+TGG | - | chr1_1:7489250-7489269 | Msa0005050:CDS | 30.0% | |
| !!! | AAAAATGTGCTTTTGGAGTT+TGG | - | chr1_1:7489315-7489334 | Msa0005050:CDS | 30.0% |
| !!! | AAAATGTGCTTTTGGAGTTT+GGG | - | chr1_1:7489316-7489335 | Msa0005050:CDS | 30.0% |
| TTGCTAATGTTCATGCATAT+TGG | - | chr1_1:7489357-7489376 | Msa0005050:CDS | 30.0% | |
| ! | TGAATATCAAAAGCATGCAT+TGG | + | chr1_1:7489384-7489403 | None:intergenic | 30.0% |
| !!! | ATGTTGCTTTGTTGTTTTCT+AGG | - | chr1_1:7489505-7489524 | Msa0005050:intron | 30.0% |
| ! | ATTTTTGACAACTTCTTTGC+AGG | + | chr1_1:7489558-7489577 | None:intergenic | 30.0% |
| ! | AGCTCTGTTTGATTTATGTA+AGG | - | chr1_1:7489628-7489647 | Msa0005050:intron | 30.0% |
| AATGAATAGCAATGAATGAG+TGG | + | chr1_1:7489909-7489928 | None:intergenic | 30.0% | |
| !!! | TGATGTTGTTTTGGTTGTTA+AGG | + | chr1_1:7489935-7489954 | None:intergenic | 30.0% |
| AATGGAATTCCAATACTTTC+TGG | - | chr1_1:7489957-7489976 | Msa0005050:intron | 30.0% | |
| ! | TCATTTGTTACATCACAACA+TGG | - | chr1_1:7490041-7490060 | Msa0005050:CDS | 30.0% |
| AAGTTCATTGCTACAATTTG+AGG | + | chr1_1:7490378-7490397 | None:intergenic | 30.0% | |
| ATGGAACTTTCTATGAGTTT+AGG | - | chr1_1:7490515-7490534 | Msa0005050:intron | 30.0% | |
| TGGAACTTTCTATGAGTTTA+GGG | - | chr1_1:7490516-7490535 | Msa0005050:intron | 30.0% | |
| TATCTTGATCCTAATATTGC+CGG | + | chr1_1:7490566-7490585 | None:intergenic | 30.0% | |
| CTTGATGAGATAAACTATTC+GGG | - | chr1_1:7490641-7490660 | Msa0005050:intron | 30.0% | |
| AAACATACACTAATTCGATC+AGG | + | chr1_1:7490898-7490917 | None:intergenic | 30.0% | |
| ! | TCGAATTAGTGTATGTTTTC+TGG | - | chr1_1:7490900-7490919 | Msa0005050:intron | 30.0% |
| ! | AAGTGAACAATTTTGCATCT+AGG | + | chr1_1:7491155-7491174 | None:intergenic | 30.0% |
| GCAAATTGTATGATGTTGAA+TGG | - | chr1_1:7491251-7491270 | Msa0005050:CDS | 30.0% | |
| !!! | TAGTCTTTATTTTACTCAGG+TGG | - | chr1_1:7491404-7491423 | Msa0005050:CDS | 30.0% |
| CAGTCAATATAGTCAATGTT+TGG | - | chr1_1:7491428-7491447 | Msa0005050:CDS | 30.0% | |
| TAGCAAACATATTCTTTCCA+TGG | - | chr1_1:7491569-7491588 | Msa0005050:CDS | 30.0% | |
| AGCAAACATATTCTTTCCAT+GGG | - | chr1_1:7491570-7491589 | Msa0005050:CDS | 30.0% | |
| ACTGTTAAAATTTGATCCCA+TGG | + | chr1_1:7491589-7491608 | None:intergenic | 30.0% | |
| CTTCATTCATTCAAAAGCAA+TGG | - | chr1_1:7491646-7491665 | Msa0005050:CDS | 30.0% | |
| TGAAAAGGAAAGATCAGTTA+TGG | - | chr1_1:7491682-7491701 | Msa0005050:CDS | 30.0% | |
| GATAAAAAACCTTGATACTG+TGG | + | chr1_1:7491850-7491869 | None:intergenic | 30.0% | |
| ! | CCTGACTATTAATTTGGAAT+CGG | + | chr1_1:7492134-7492153 | None:intergenic | 30.0% |
| ! | GTCATTAATTTGAGATCGAA+TGG | + | chr1_1:7492199-7492218 | None:intergenic | 30.0% |
| CAAGGATTAAGTAATGTCTA+CGG | + | chr1_1:7492262-7492281 | None:intergenic | 30.0% | |
| ! | GATAAGGGCTACATTTTTAA+TGG | + | chr1_1:7492308-7492327 | None:intergenic | 30.0% |
| ! | ATATTTATGGTTGGTTGTGT+AGG | - | chr1_1:7492374-7492393 | Msa0005050:intron | 30.0% |
| ! | AACCAGAAGTATGCTGAAAA+GGG | + | chr1_1:7489407-7489426 | None:intergenic | 35.0% |
| ! | AAACCAGAAGTATGCTGAAA+AGG | + | chr1_1:7489408-7489427 | None:intergenic | 35.0% |
| !! | GTTGTTTTCTAGGTTCTCAT+AGG | - | chr1_1:7489515-7489534 | Msa0005050:intron | 35.0% |
| AATCAAACAGAGCTACCATA+TGG | + | chr1_1:7489622-7489641 | None:intergenic | 35.0% | |
| TTGTTACATCACAACATGGA+AGG | - | chr1_1:7490045-7490064 | Msa0005050:CDS | 35.0% | |
| ! | TTTTCAGTTCCTGCTAGAAT+TGG | - | chr1_1:7490113-7490132 | Msa0005050:CDS | 35.0% |
| AAAGCTCAAGAGAGTAATGT+TGG | - | chr1_1:7490257-7490276 | Msa0005050:CDS | 35.0% | |
| ! | TTTGATGATTGCCATCCATT+TGG | + | chr1_1:7490323-7490342 | None:intergenic | 35.0% |
| GACTTAACTCATAGCATGAA+TGG | - | chr1_1:7490455-7490474 | Msa0005050:intron | 35.0% | |
| TAGCATGAATGGAACAAGAT+CGG | - | chr1_1:7490466-7490485 | Msa0005050:intron | 35.0% | |
| AAGTTCCATACTACTACATG+AGG | + | chr1_1:7490504-7490523 | None:intergenic | 35.0% | |
| ! | TAAACATGTCAAGTTTTCGC+CGG | - | chr1_1:7490544-7490563 | Msa0005050:intron | 35.0% |
| ! | AAGATACCTTGCTGTAATTC+AGG | - | chr1_1:7490580-7490599 | Msa0005050:intron | 35.0% |
| GTATTTCCTGAATTACAGCA+AGG | + | chr1_1:7490589-7490608 | None:intergenic | 35.0% | |
| ATTTATTCCTATCCTTCGCT+TGG | + | chr1_1:7490714-7490733 | None:intergenic | 35.0% | |
| !! | ATGCTGATTCTTCATTGCAA+AGG | - | chr1_1:7490762-7490781 | Msa0005050:intron | 35.0% |
| AATTCGATCAGGACTATGAA+CGG | + | chr1_1:7490887-7490906 | None:intergenic | 35.0% | |
| ! | TCTGGTTTCATTCTTGAACA+TGG | - | chr1_1:7490918-7490937 | Msa0005050:intron | 35.0% |
| TTTACATGCAACACACTCTT+AGG | - | chr1_1:7491072-7491091 | Msa0005050:CDS | 35.0% | |
| ACATTCCAAAGTTACACACA+AGG | - | chr1_1:7491313-7491332 | Msa0005050:CDS | 35.0% | |
| TTGATCCTTGTGTGTAACTT+TGG | + | chr1_1:7491321-7491340 | None:intergenic | 35.0% | |
| AAGTTACACACAAGGATCAA+AGG | - | chr1_1:7491321-7491340 | Msa0005050:CDS | 35.0% | |
| AACGGTTTCTCGACTATATA+AGG | - | chr1_1:7491530-7491549 | Msa0005050:CDS | 35.0% | |
| TATATAAGGACTTGAGAGAG+AGG | - | chr1_1:7491544-7491563 | Msa0005050:CDS | 35.0% | |
| AAAGGAAAGATCAGTTATGG+AGG | - | chr1_1:7491685-7491704 | Msa0005050:CDS | 35.0% | |
| AAACATCCAATCACGTAGAA+CGG | + | chr1_1:7491742-7491761 | None:intergenic | 35.0% | |
| TAGATAATACTTACGGATGG+AGG | + | chr1_1:7491773-7491792 | None:intergenic | 35.0% | |
| !!! | AGGTTTTTTATCCCCAATTC+CGG | - | chr1_1:7491858-7491877 | Msa0005050:CDS | 35.0% |
| AGATCATTGATGAATGCATG+TGG | - | chr1_1:7491963-7491982 | Msa0005050:exon | 35.0% | |
| ACAATGATGTGATGCATTTC+AGG | - | chr1_1:7491991-7492010 | Msa0005050:intron | 35.0% | |
| AAATGCTTCTCTGCATCTTT+AGG | + | chr1_1:7492020-7492039 | None:intergenic | 35.0% | |
| CCGATTCCAAATTAATAGTC+AGG | - | chr1_1:7492131-7492150 | Msa0005050:five_prime_UTR | 35.0% | |
| TCCAAATTAATAGTCAGGTC+AGG | - | chr1_1:7492136-7492155 | Msa0005050:five_prime_UTR | 35.0% | |
| TCCTGACCTGACTATTAATT+TGG | + | chr1_1:7492140-7492159 | None:intergenic | 35.0% | |
| ATTAATAGTCAGGTCAGGAT+CGG | - | chr1_1:7492141-7492160 | Msa0005050:five_prime_UTR | 35.0% | |
| !! | GGATCGGTTAAAACTGATTT+TGG | - | chr1_1:7492157-7492176 | Msa0005050:five_prime_UTR | 35.0% |
| ! | GTTGAAAACATGTGGTTTTC+CGG | - | chr1_1:7492234-7492253 | Msa0005050:five_prime_UTR | 35.0% |
| TTAAGTAATGTCTACGGATC+CGG | + | chr1_1:7492256-7492275 | None:intergenic | 35.0% | |
| !!! | TAATCCTTGCTTGTTTTGAG+AGG | - | chr1_1:7492273-7492292 | Msa0005050:intron | 35.0% |
| GCATACATTTCCTCAATCAA+TGG | + | chr1_1:7492441-7492460 | None:intergenic | 35.0% | |
| AGAAAAGCTTGTCGAAATGA+AGG | - | chr1_1:7492474-7492493 | Msa0005050:intron | 35.0% | |
| TTCTAGGTTCTCATAGGACA+AGG | - | chr1_1:7489521-7489540 | Msa0005050:intron | 40.0% | |
| GTACACTGCTCAAATGAACA+TGG | - | chr1_1:7489833-7489852 | Msa0005050:intron | 40.0% | |
| GGAATTCCAATACTTTCTGG+TGG | - | chr1_1:7489960-7489979 | Msa0005050:intron | 40.0% | |
| ! | TGTTCTCCACCAGAAAGTAT+TGG | + | chr1_1:7489969-7489988 | None:intergenic | 40.0% |
| ACAACATGGAAGGACTATTG+TGG | - | chr1_1:7490055-7490074 | Msa0005050:CDS | 40.0% | |
| TCTTGAAGACCAATTCTAGC+AGG | + | chr1_1:7490125-7490144 | None:intergenic | 40.0% | |
| TCACCAAAAGTTGCACACAA+GGG | + | chr1_1:7490209-7490228 | None:intergenic | 40.0% | |
| ATCACCAAAAGTTGCACACA+AGG | + | chr1_1:7490210-7490229 | None:intergenic | 40.0% | |
| TTCATGTCATATTCGCCGAT+AGG | - | chr1_1:7490287-7490306 | Msa0005050:CDS | 40.0% | |
| TCATGTCATATTCGCCGATA+GGG | - | chr1_1:7490288-7490307 | Msa0005050:CDS | 40.0% | |
| TTTGGATCGATGTTCCCTAT+CGG | + | chr1_1:7490305-7490324 | None:intergenic | 40.0% | |
| ATAGGGAACATCGATCCAAA+TGG | - | chr1_1:7490305-7490324 | Msa0005050:CDS | 40.0% | |
| AGCATGAATGGAACAAGATC+GGG | - | chr1_1:7490467-7490486 | Msa0005050:intron | 40.0% | |
| ACAAGCCTCATGTAGTAGTA+TGG | - | chr1_1:7490496-7490515 | Msa0005050:intron | 40.0% | |
| ! | AAGTTTTCGCCGGCAATATT+AGG | - | chr1_1:7490554-7490573 | Msa0005050:intron | 40.0% |
| ! | GAGATAAACTATTCGGGTTC+TGG | - | chr1_1:7490647-7490666 | Msa0005050:intron | 40.0% |
| TCAGCATAAGCTTCTGACAT+AGG | + | chr1_1:7490749-7490768 | None:intergenic | 40.0% | |
| ACTCTTGATGCTTCTACAGA+TGG | - | chr1_1:7490811-7490830 | Msa0005050:intron | 40.0% | |
| GCAAAGTGTGCATGTATTTG+TGG | + | chr1_1:7491504-7491523 | None:intergenic | 40.0% | |
| ! | TGCACACTTTGCTGTCAAAA+CGG | - | chr1_1:7491512-7491531 | Msa0005050:CDS | 40.0% |
| TAACAGTTCATGGTCAGAAG+AGG | - | chr1_1:7491602-7491621 | Msa0005050:CDS | 40.0% | |
| TTCATGGTCAGAAGAGGATA+AGG | - | chr1_1:7491608-7491627 | Msa0005050:CDS | 40.0% | |
| AGAACGGAAACAGATCTTTC+TGG | + | chr1_1:7491726-7491745 | None:intergenic | 40.0% | |
| AGTTCCTCTCAAAACAAGCA+AGG | + | chr1_1:7492280-7492299 | None:intergenic | 40.0% | |
| TGGTTGTGTAGGTATCAAAC+TGG | - | chr1_1:7492385-7492404 | Msa0005050:intron | 40.0% | |
| GGTTTATAAATGCGCGTGTT+CGG | - | chr1_1:7492406-7492425 | Msa0005050:intron | 40.0% | |
| ! | GCTATGGAAACCATTGATTG+AGG | - | chr1_1:7492428-7492447 | Msa0005050:intron | 40.0% |
| ! | CACCCTTTTCAGCATACTTC+TGG | - | chr1_1:7489402-7489421 | Msa0005050:intron | 45.0% |
| ACTGCTCAAATGAACATGGC+TGG | - | chr1_1:7489837-7489856 | Msa0005050:intron | 45.0% | |
| ! | AACCCCTTGTGTGCAACTTT+TGG | - | chr1_1:7490203-7490222 | Msa0005050:CDS | 45.0% |
| CACCAAAAGTTGCACACAAG+GGG | + | chr1_1:7490208-7490227 | None:intergenic | 45.0% | |
| GGAACATCGATCCAAATGGA+TGG | - | chr1_1:7490309-7490328 | Msa0005050:CDS | 45.0% | |
| CTTGCAACATCACCAACTTC+AGG | - | chr1_1:7490407-7490426 | Msa0005050:intron | 45.0% | |
| !! | TCTGAGCATTGACCTGAAGT+TGG | + | chr1_1:7490422-7490441 | None:intergenic | 45.0% |
| GGTCAATGCTCAGAGATTAG+TGG | - | chr1_1:7490428-7490447 | Msa0005050:intron | 45.0% | |
| GAATGGAACAAGATCGGGTT+TGG | - | chr1_1:7490472-7490491 | Msa0005050:intron | 45.0% | |
| ! | TATTCGGGTTCTGGTGTTAG+AGG | - | chr1_1:7490656-7490675 | Msa0005050:intron | 45.0% |
| AACACAACCAAGCGAAGGAT+AGG | - | chr1_1:7490704-7490723 | Msa0005050:intron | 45.0% | |
| GGGCTCTTCAACAGTTGAAA+AGG | - | chr1_1:7491667-7491686 | Msa0005050:CDS | 45.0% | |
| CTGTTTCCGTTCTACGTGAT+TGG | - | chr1_1:7491733-7491752 | Msa0005050:CDS | 45.0% | |
| !! | AAGTGGGTTGACTAGAAGTC+AGG | - | chr1_1:7492052-7492071 | Msa0005050:intron | 45.0% |
| ATGAGAGCAGTGAAAGAAGC+AGG | - | chr1_1:7492502-7492521 | Msa0005050:intron | 45.0% | |
| TGTCGAACACAACCAAGCGA+AGG | - | chr1_1:7490699-7490718 | Msa0005050:intron | 50.0% | |
| ATCAGTTATGGAGGCCCCAA+AGG | - | chr1_1:7491694-7491713 | Msa0005050:CDS | 50.0% | |
| TCAGTTATGGAGGCCCCAAA+GGG | - | chr1_1:7491695-7491714 | Msa0005050:CDS | 50.0% | |
| ! | TCTTTCTGGCAAGCCCCTTT+GGG | + | chr1_1:7491712-7491731 | None:intergenic | 50.0% |
| ! | ATCTTTCTGGCAAGCCCCTT+TGG | + | chr1_1:7491713-7491732 | None:intergenic | 50.0% |
| CGATTGCAGCCACAGTATCA+AGG | - | chr1_1:7491838-7491857 | Msa0005050:CDS | 50.0% | |
| TAAATGCGCGTGTTCGGCTA+TGG | - | chr1_1:7492412-7492431 | Msa0005050:intron | 50.0% | |
| CAGTTATGGAGGCCCCAAAG+GGG | - | chr1_1:7491696-7491715 | Msa0005050:CDS | 55.0% | |
| ! | CTTTCTGGCAAGCCCCTTTG+GGG | + | chr1_1:7491711-7491730 | None:intergenic | 55.0% |
| AGCTGATGCAGCCGGAATTG+GGG | + | chr1_1:7491872-7491891 | None:intergenic | 55.0% | |
| CAGCTGATGCAGCCGGAATT+GGG | + | chr1_1:7491873-7491892 | None:intergenic | 55.0% | |
| CGAAATGCAGCTGATGCAGC+CGG | + | chr1_1:7491880-7491899 | None:intergenic | 55.0% | |
| ! | GGTTCTGGTGTTAGAGGCCG+AGG | - | chr1_1:7490662-7490681 | Msa0005050:intron | 60.0% |
| GCAGCTGATGCAGCCGGAAT+TGG | + | chr1_1:7491874-7491893 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 7489112 | 7492673 | 7489112 | ID=Msa0005050;Name=Msa0005050 |
| chr1_1 | mRNA | 7489112 | 7492673 | 7489112 | ID=Msa0005050-mRNA-1;Parent=Msa0005050;Name=Msa0005050-mRNA-1;_AED=0.05;_eAED=0.05;_QI=254|1|1|1|0.6|0.5|6|113|531 |
| chr1_1 | exon | 7489112 | 7489389 | 7489112 | ID=Msa0005050-mRNA-1:exon:2680;Parent=Msa0005050-mRNA-1 |
| chr1_1 | exon | 7489712 | 7489772 | 7489712 | ID=Msa0005050-mRNA-1:exon:2679;Parent=Msa0005050-mRNA-1 |
| chr1_1 | exon | 7490007 | 7490362 | 7490007 | ID=Msa0005050-mRNA-1:exon:2678;Parent=Msa0005050-mRNA-1 |
| chr1_1 | exon | 7490953 | 7491987 | 7490953 | ID=Msa0005050-mRNA-1:exon:2677;Parent=Msa0005050-mRNA-1 |
| chr1_1 | exon | 7492113 | 7492258 | 7492113 | ID=Msa0005050-mRNA-1:exon:2676;Parent=Msa0005050-mRNA-1 |
| chr1_1 | exon | 7492587 | 7492673 | 7492587 | ID=Msa0005050-mRNA-1:exon:2675;Parent=Msa0005050-mRNA-1 |
| chr1_1 | five_prime_UTR | 7492587 | 7492673 | 7492587 | ID=Msa0005050-mRNA-1:five_prime_utr;Parent=Msa0005050-mRNA-1 |
| chr1_1 | five_prime_UTR | 7492113 | 7492258 | 7492113 | ID=Msa0005050-mRNA-1:five_prime_utr;Parent=Msa0005050-mRNA-1 |
| chr1_1 | five_prime_UTR | 7491967 | 7491987 | 7491967 | ID=Msa0005050-mRNA-1:five_prime_utr;Parent=Msa0005050-mRNA-1 |
| chr1_1 | CDS | 7490953 | 7491966 | 7490953 | ID=Msa0005050-mRNA-1:cds;Parent=Msa0005050-mRNA-1 |
| chr1_1 | CDS | 7490007 | 7490362 | 7490007 | ID=Msa0005050-mRNA-1:cds;Parent=Msa0005050-mRNA-1 |
| chr1_1 | CDS | 7489712 | 7489772 | 7489712 | ID=Msa0005050-mRNA-1:cds;Parent=Msa0005050-mRNA-1 |
| chr1_1 | CDS | 7489225 | 7489389 | 7489225 | ID=Msa0005050-mRNA-1:cds;Parent=Msa0005050-mRNA-1 |
| chr1_1 | three_prime_UTR | 7489112 | 7489224 | 7489112 | ID=Msa0005050-mRNA-1:three_prime_utr;Parent=Msa0005050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
