Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0457570 | KEH34240.1 | 95.513 | 156 | 7 | 0 | 1 | 156 | 1 | 156 | 1.87e-99 | 317 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0457570 | sp|O81643|VILI1_ARATH | 57.051 | 156 | 67 | 0 | 1 | 156 | 1 | 156 | 3.23e-56 | 197 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0457570 | A0A072V7S7 | 95.513 | 156 | 7 | 0 | 1 | 156 | 1 | 156 | 8.91e-100 | 317 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003080 | Msa0457570 | 0.854684 | 1.045003e-61 | -8.615850e-47 |
| Msa0014770 | Msa0457570 | 0.810879 | 9.254347e-51 | -8.615850e-47 |
| Msa0017670 | Msa0457570 | 0.814306 | 1.647884e-51 | -8.615850e-47 |
| Msa0025160 | Msa0457570 | 0.856987 | 2.217683e-62 | -8.615850e-47 |
| Msa0027280 | Msa0457570 | 0.813632 | 2.319894e-51 | -8.615850e-47 |
| Msa0032460 | Msa0457570 | 0.806714 | 7.193033e-50 | -8.615850e-47 |
| Msa0033220 | Msa0457570 | 0.837785 | 4.234006e-57 | -8.615850e-47 |
| Msa0035340 | Msa0457570 | 0.807939 | 3.955325e-50 | -8.615850e-47 |
| Msa0035380 | Msa0457570 | 0.817763 | 2.785444e-52 | -8.615850e-47 |
| Msa0037680 | Msa0457570 | 0.800988 | 1.112868e-48 | -8.615850e-47 |
| Msa0038530 | Msa0457570 | 0.800504 | 1.397272e-48 | -8.615850e-47 |
| Msa0042640 | Msa0457570 | 0.834526 | 2.848406e-56 | -8.615850e-47 |
| Msa0044160 | Msa0457570 | 0.807405 | 5.137058e-50 | -8.615850e-47 |
| Msa0050660 | Msa0457570 | 0.836046 | 1.177266e-56 | -8.615850e-47 |
| Msa0050700 | Msa0457570 | 0.837277 | 5.714795e-57 | -8.615850e-47 |
| Msa0050790 | Msa0457570 | 0.832589 | 8.673891e-56 | -8.615850e-47 |
| Msa0072520 | Msa0457570 | 0.831028 | 2.105145e-55 | -8.615850e-47 |
| Msa0073120 | Msa0457570 | 0.803095 | 4.106085e-49 | -8.615850e-47 |
| Msa0077340 | Msa0457570 | 0.800821 | 1.204039e-48 | -8.615850e-47 |
| Msa0077560 | Msa0457570 | 0.806944 | 6.431120e-50 | -8.615850e-47 |
| Msa0077570 | Msa0457570 | -0.818968 | 1.485600e-52 | -8.615850e-47 |
| Msa0079880 | Msa0457570 | 0.832775 | 7.798232e-56 | -8.615850e-47 |
| Msa0080030 | Msa0457570 | 0.827020 | 1.970415e-54 | -8.615850e-47 |
| Msa0081980 | Msa0457570 | 0.801764 | 7.718384e-49 | -8.615850e-47 |
| Msa0094570 | Msa0457570 | 0.806100 | 9.691713e-50 | -8.615850e-47 |
| Msa0094790 | Msa0457570 | 0.818319 | 2.086011e-52 | -8.615850e-47 |
| Msa0098040 | Msa0457570 | 0.817134 | 3.860772e-52 | -8.615850e-47 |
| Msa0102240 | Msa0457570 | 0.815708 | 8.047782e-52 | -8.615850e-47 |
| Msa0108880 | Msa0457570 | 0.803816 | 2.910624e-49 | -8.615850e-47 |
| Msa0113340 | Msa0457570 | 0.806599 | 7.607254e-50 | -8.615850e-47 |
| Msa0121330 | Msa0457570 | 0.819312 | 1.241076e-52 | -8.615850e-47 |
| Msa0123070 | Msa0457570 | 0.817910 | 2.580455e-52 | -8.615850e-47 |
| Msa0129930 | Msa0457570 | -0.806140 | 9.504214e-50 | -8.615850e-47 |
| Msa0132700 | Msa0457570 | 0.822403 | 2.413840e-53 | -8.615850e-47 |
| Msa0141640 | Msa0457570 | 0.802059 | 6.712795e-49 | -8.615850e-47 |
| Msa0143670 | Msa0457570 | 0.811015 | 8.649123e-51 | -8.615850e-47 |
| Msa0146650 | Msa0457570 | 0.847651 | 1.010525e-59 | -8.615850e-47 |
| Msa0154620 | Msa0457570 | 0.824471 | 7.929372e-54 | -8.615850e-47 |
| Msa0161930 | Msa0457570 | 0.834220 | 3.400479e-56 | -8.615850e-47 |
| Msa0165640 | Msa0457570 | 0.818796 | 1.625822e-52 | -8.615850e-47 |
| Msa0174290 | Msa0457570 | 0.808903 | 2.463441e-50 | -8.615850e-47 |
| Msa0176060 | Msa0457570 | 0.817557 | 3.100591e-52 | -8.615850e-47 |
| Msa0181880 | Msa0457570 | 0.808352 | 3.230438e-50 | -8.615850e-47 |
| Msa0200050 | Msa0457570 | 0.803608 | 3.213542e-49 | -8.615850e-47 |
| Msa0203080 | Msa0457570 | 0.824938 | 6.154339e-54 | -8.615850e-47 |
| Msa0235290 | Msa0457570 | 0.808538 | 2.948498e-50 | -8.615850e-47 |
| Msa0365210 | Msa0457570 | 0.831714 | 1.427028e-55 | -8.615850e-47 |
| Msa0367690 | Msa0457570 | 0.803970 | 2.703515e-49 | -8.615850e-47 |
| Msa0375330 | Msa0457570 | -0.836241 | 1.050084e-56 | -8.615850e-47 |
| Msa0381730 | Msa0457570 | 0.814880 | 1.229765e-51 | -8.615850e-47 |
| Msa0383000 | Msa0457570 | 0.804263 | 2.349709e-49 | -8.615850e-47 |
| Msa0412790 | Msa0457570 | 0.837668 | 4.538871e-57 | -8.615850e-47 |
| Msa0431200 | Msa0457570 | 0.817921 | 2.566458e-52 | -8.615850e-47 |
| Msa0432010 | Msa0457570 | 0.808511 | 2.988599e-50 | -8.615850e-47 |
| Msa0433150 | Msa0457570 | 0.800494 | 1.403568e-48 | -8.615850e-47 |
| Msa0435210 | Msa0457570 | 0.822959 | 1.791898e-53 | -8.615850e-47 |
| Msa0437620 | Msa0457570 | 0.817107 | 3.913796e-52 | -8.615850e-47 |
| Msa0457560 | Msa0457570 | 0.884475 | 1.857184e-71 | -8.615850e-47 |
| Msa0457570 | Msa0464000 | 0.800731 | 1.256198e-48 | -8.615850e-47 |
| Msa0457570 | Msa0479320 | 0.842936 | 1.907414e-58 | -8.615850e-47 |
| Msa0457570 | Msa0509550 | 0.801852 | 7.404336e-49 | -8.615850e-47 |
| Msa0457570 | Msa0513970 | 0.876366 | 1.478711e-68 | -8.615850e-47 |
| Msa0457570 | Msa0520260 | 0.824786 | 6.684552e-54 | -8.615850e-47 |
| Msa0457570 | Msa0521830 | 0.802618 | 5.151837e-49 | -8.615850e-47 |
| Msa0457570 | Msa0528570 | 0.822022 | 2.958727e-53 | -8.615850e-47 |
| Msa0457570 | Msa0529030 | 0.808499 | 3.004897e-50 | -8.615850e-47 |
| Msa0457570 | Msa0531960 | 0.809154 | 2.177112e-50 | -8.615850e-47 |
| Msa0457570 | Msa0541300 | 0.812401 | 4.319952e-51 | -8.615850e-47 |
| Msa0457570 | Msa0541310 | 0.810571 | 1.078872e-50 | -8.615850e-47 |
| Msa0457570 | Msa0550050 | 0.818857 | 1.575155e-52 | -8.615850e-47 |
| Msa0457570 | Msa0566280 | 0.825704 | 4.054308e-54 | -8.615850e-47 |
| Msa0457570 | Msa0570010 | 0.859830 | 3.152898e-63 | -8.615850e-47 |
| Msa0457570 | Msa0580810 | 0.819294 | 1.252613e-52 | -8.615850e-47 |
| Msa0457570 | Msa0585020 | 0.804868 | 1.756892e-49 | -8.615850e-47 |
| Msa0457570 | Msa0597270 | 0.810275 | 1.249895e-50 | -8.615850e-47 |
| Msa0457570 | Msa0607800 | 0.801189 | 1.012452e-48 | -8.615850e-47 |
| Msa0457570 | Msa0616210 | 0.838255 | 3.204863e-57 | -8.615850e-47 |
| Msa0457570 | Msa0619710 | 0.858142 | 1.009079e-62 | -8.615850e-47 |
| Msa0457570 | Msa0620900 | 0.824619 | 7.316792e-54 | -8.615850e-47 |
| Msa0457570 | Msa0655700 | 0.809802 | 1.580092e-50 | -8.615850e-47 |
| Msa0457570 | Msa0657710 | 0.847944 | 8.391550e-60 | -8.615850e-47 |
| Msa0457570 | Msa0657720 | 0.851672 | 7.617030e-61 | -8.615850e-47 |
| Msa0457570 | Msa0660090 | 0.809192 | 2.136832e-50 | -8.615850e-47 |
| Msa0457570 | Msa0666700 | 0.809978 | 1.448350e-50 | -8.615850e-47 |
| Msa0457570 | Msa0675330 | 0.808789 | 2.606537e-50 | -8.615850e-47 |
| Msa0457570 | Msa0687090 | 0.822754 | 1.999789e-53 | -8.615850e-47 |
| Msa0457570 | Msa0695560 | 0.801527 | 8.634405e-49 | -8.615850e-47 |
| Msa0457570 | Msa0699540 | 0.838977 | 2.086141e-57 | -8.615850e-47 |
| Msa0457570 | Msa0702790 | 0.846860 | 1.665299e-59 | -8.615850e-47 |
| Msa0457570 | Msa0702800 | 0.837207 | 5.955671e-57 | -8.615850e-47 |
| Msa0457570 | Msa0706150 | 0.865000 | 8.108565e-65 | -8.615850e-47 |
| Msa0457570 | Msa0716480 | 0.824400 | 8.238676e-54 | -8.615850e-47 |
| Msa0457570 | Msa0720410 | 0.819829 | 9.455570e-53 | -8.615850e-47 |
| Msa0457570 | Msa0722890 | 0.828679 | 7.863149e-55 | -8.615850e-47 |
| Msa0457570 | Msa0723090 | 0.852078 | 5.842915e-61 | -8.615850e-47 |
| Msa0457570 | Msa0725750 | 0.805797 | 1.122146e-49 | -8.615850e-47 |
| Msa0457570 | Msa0733080 | 0.805324 | 1.410509e-49 | -8.615850e-47 |
| Msa0457570 | Msa0734250 | 0.834340 | 3.172118e-56 | -8.615850e-47 |
| Msa0457570 | Msa0738700 | 0.809389 | 1.938997e-50 | -8.615850e-47 |
| Msa0457570 | Msa0740710 | 0.819909 | 9.066877e-53 | -8.615850e-47 |
| Msa0457570 | Msa0745140 | 0.812446 | 4.222996e-51 | -8.615850e-47 |
| Msa0457570 | Msa0760970 | 0.819906 | 9.081864e-53 | -8.615850e-47 |
| Msa0457570 | Msa0773630 | 0.806284 | 8.863374e-50 | -8.615850e-47 |
| Msa0457570 | Msa0776640 | 0.814112 | 1.818687e-51 | -8.615850e-47 |
| Msa0457570 | Msa0780910 | 0.818216 | 2.200441e-52 | -8.615850e-47 |
| Msa0457570 | Msa0792370 | 0.838468 | 2.825712e-57 | -8.615850e-47 |
| Msa0457570 | Msa0795750 | 0.816306 | 5.918723e-52 | -8.615850e-47 |
| Msa0457570 | Msa0813160 | 0.815699 | 8.086962e-52 | -8.615850e-47 |
| Msa0457570 | Msa0825920 | 0.810397 | 1.176253e-50 | -8.615850e-47 |
| Msa0457570 | Msa0828950 | 0.846312 | 2.350567e-59 | -8.615850e-47 |
| Msa0457570 | Msa0828960 | 0.843707 | 1.187586e-58 | -8.615850e-47 |
| Msa0457570 | Msa0837460 | 0.815750 | 7.877734e-52 | -8.615850e-47 |
| Msa0457570 | Msa0841590 | 0.825942 | 3.559187e-54 | -8.615850e-47 |
| Msa0457570 | Msa0859290 | 0.824758 | 6.783988e-54 | -8.615850e-47 |
| Msa0457570 | Msa0864940 | 0.801307 | 9.576441e-49 | -8.615850e-47 |
| Msa0457570 | Msa0865420 | 0.825812 | 3.822148e-54 | -8.615850e-47 |
| Msa0457570 | Msa0866530 | 0.801549 | 8.543499e-49 | -8.615850e-47 |
| Msa0457570 | Msa0876940 | 0.804779 | 1.833405e-49 | -8.615850e-47 |
| Msa0457570 | Msa0882780 | 0.800437 | 1.441554e-48 | -8.615850e-47 |
| Msa0457570 | Msa0909260 | 0.812681 | 3.751828e-51 | -8.615850e-47 |
| Msa0457570 | Msa0921590 | 0.823156 | 1.612223e-53 | -8.615850e-47 |
| Msa0457570 | Msa0935740 | 0.831358 | 1.746840e-55 | -8.615850e-47 |
| Msa0457570 | Msa0940910 | 0.819363 | 1.208250e-52 | -8.615850e-47 |
| Msa0457570 | Msa0972740 | 0.820109 | 8.157727e-53 | -8.615850e-47 |
| Msa0457570 | Msa0994720 | 0.813860 | 2.066465e-51 | -8.615850e-47 |
| Msa0457570 | Msa1002640 | 0.803210 | 3.885791e-49 | -8.615850e-47 |
| Msa0457570 | Msa1019420 | 0.807282 | 5.455267e-50 | -8.615850e-47 |
| Msa0457570 | Msa1021590 | 0.808895 | 2.473626e-50 | -8.615850e-47 |
| Msa0457570 | Msa1022420 | 0.814223 | 1.718990e-51 | -8.615850e-47 |
| Msa0457570 | Msa1042160 | 0.822131 | 2.790983e-53 | -8.615850e-47 |
| Msa0457570 | Msa1042190 | 0.825502 | 4.527107e-54 | -8.615850e-47 |
| Msa0457570 | Msa1042300 | 0.802633 | 5.114304e-49 | -8.615850e-47 |
| Msa0457570 | Msa1044250 | 0.839458 | 1.565601e-57 | -8.615850e-47 |
| Msa0457570 | Msa1078820 | 0.849187 | 3.798014e-60 | -8.615850e-47 |
| Msa0457570 | Msa1081690 | 0.827395 | 1.602328e-54 | -8.615850e-47 |
| Msa0457570 | Msa1105640 | 0.815408 | 9.386720e-52 | -8.615850e-47 |
| Msa0457570 | Msa1106590 | 0.834946 | 2.233096e-56 | -8.615850e-47 |
| Msa0457570 | Msa1123970 | 0.845186 | 4.750144e-59 | -8.615850e-47 |
| Msa0457570 | Msa1125250 | 0.841431 | 4.772281e-58 | -8.615850e-47 |
| Msa0457570 | Msa1125820 | 0.804212 | 2.407461e-49 | -8.615850e-47 |
| Msa0457570 | Msa1125990 | 0.806252 | 9.001373e-50 | -8.615850e-47 |
| Msa0457570 | Msa1127970 | 0.824346 | 8.483262e-54 | -8.615850e-47 |
| Msa0457570 | Msa1149910 | 0.816812 | 4.559889e-52 | -8.615850e-47 |
| Msa0457570 | Msa1154320 | 0.824370 | 8.375667e-54 | -8.615850e-47 |
| Msa0457570 | Msa1166190 | 0.834983 | 2.186288e-56 | -8.615850e-47 |
| Msa0457570 | Msa1166290 | 0.832626 | 8.489214e-56 | -8.615850e-47 |
| Msa0457570 | Msa1167470 | 0.825781 | 3.886695e-54 | -8.615850e-47 |
| Msa0457570 | Msa1169650 | 0.841971 | 3.438332e-58 | -8.615850e-47 |
| Msa0457570 | Msa1184890 | 0.815566 | 8.657125e-52 | -8.615850e-47 |
| Msa0457570 | Msa1192560 | 0.821315 | 4.310655e-53 | -8.615850e-47 |
| Msa0457570 | Msa1192590 | 0.815666 | 8.222684e-52 | -8.615850e-47 |
| Msa0457570 | Msa1194240 | 0.833560 | 4.971453e-56 | -8.615850e-47 |
| Msa0457570 | Msa1205110 | 0.811337 | 7.365338e-51 | -8.615850e-47 |
| Msa0457570 | Msa1214310 | 0.825191 | 5.362621e-54 | -8.615850e-47 |
| Msa0457570 | Msa1221120 | 0.817943 | 2.536743e-52 | -8.615850e-47 |
| Msa0457570 | Msa1228580 | 0.838435 | 2.881297e-57 | -8.615850e-47 |
| Msa0457570 | Msa1228630 | 0.808153 | 3.562978e-50 | -8.615850e-47 |
| Msa0457570 | Msa1242130 | 0.842097 | 3.184017e-58 | -8.615850e-47 |
| Msa0457570 | Msa1242160 | 0.803256 | 3.802878e-49 | -8.615850e-47 |
| Msa0457570 | Msa1250610 | 0.841678 | 4.106938e-58 | -8.615850e-47 |
| Msa0457570 | Msa1250660 | 0.804762 | 1.848967e-49 | -8.615850e-47 |
| Msa0457570 | Msa1263780 | 0.810498 | 1.118890e-50 | -8.615850e-47 |
| Msa0457570 | Msa1265450 | 0.819070 | 1.408310e-52 | -8.615850e-47 |
| Msa0457570 | Msa1283930 | 0.811300 | 7.499164e-51 | -8.615850e-47 |
| Msa0457570 | Msa1283960 | 0.848339 | 6.526214e-60 | -8.615850e-47 |
| Msa0457570 | Msa1290380 | 0.826632 | 2.438445e-54 | -8.615850e-47 |
| Msa0457570 | Msa1290440 | 0.821744 | 3.430254e-53 | -8.615850e-47 |
| Msa0457570 | Msa1300420 | 0.840441 | 8.680588e-58 | -8.615850e-47 |
| Msa0457570 | Msa1308850 | 0.845401 | 4.155357e-59 | -8.615850e-47 |
| Msa0457570 | Msa1322960 | 0.809357 | 1.969478e-50 | -8.615850e-47 |
| Msa0457570 | Msa1326640 | 0.840812 | 6.939341e-58 | -8.615850e-47 |
| Msa0457570 | Msa1326680 | 0.841720 | 4.003119e-58 | -8.615850e-47 |
| Msa0457570 | Msa1327800 | 0.831901 | 1.283493e-55 | -8.615850e-47 |
| Msa0457570 | Msa1338540 | 0.800899 | 1.160780e-48 | -8.615850e-47 |
| Msa0457570 | Msa1348170 | -0.834340 | 3.171208e-56 | -8.615850e-47 |
| Msa0457570 | Msa1356600 | -0.833313 | 5.729295e-56 | -8.615850e-47 |
| Msa0457570 | Msa1357070 | 0.806022 | 1.006545e-49 | -8.615850e-47 |
| Msa0457570 | Msa1358290 | 0.805668 | 1.194584e-49 | -8.615850e-47 |
| Msa0457570 | Msa1364410 | 0.806426 | 8.272137e-50 | -8.615850e-47 |
| Msa0457570 | Msa1368750 | 0.806330 | 8.670658e-50 | -8.615850e-47 |
| Msa0457570 | Msa1374790 | 0.811663 | 6.254152e-51 | -8.615850e-47 |
| Msa0457570 | Msa1381030 | 0.829833 | 4.124938e-55 | -8.615850e-47 |
| Msa0457570 | Msa1383310 | 0.820912 | 5.338932e-53 | -8.615850e-47 |
| Msa0457570 | Msa1384460 | 0.828356 | 9.406731e-55 | -8.615850e-47 |
| Msa0457570 | Msa1387450 | -0.809928 | 1.484731e-50 | -8.615850e-47 |
| Msa0457570 | Msa1396240 | 0.809208 | 2.119644e-50 | -8.615850e-47 |
| Msa0457570 | Msa1405460 | 0.807173 | 5.752251e-50 | -8.615850e-47 |
| Msa0457570 | Msa1406720 | 0.802893 | 4.520132e-49 | -8.615850e-47 |
| Msa0457570 | Msa1407840 | 0.851998 | 6.158349e-61 | -8.615850e-47 |
| Msa0457570 | Msa1409410 | 0.848972 | 4.357463e-60 | -8.615850e-47 |
| Msa0457570 | Msa1410160 | 0.841284 | 5.217124e-58 | -8.615850e-47 |
| Msa0457570 | Msa1414170 | 0.809450 | 1.881021e-50 | -8.615850e-47 |
| Msa0457570 | Msa1415540 | 0.822184 | 2.713817e-53 | -8.615850e-47 |
| Msa0457570 | Msa1417370 | 0.980322 | 5.947940e-150 | -8.615850e-47 |
| Msa0457570 | Msa1417380 | 0.879304 | 1.390006e-69 | -8.615850e-47 |
| Msa0457570 | Msa1422860 | 0.828182 | 1.036308e-54 | -8.615850e-47 |
| Msa0457570 | Msa1433360 | 0.822108 | 2.825557e-53 | -8.615850e-47 |
| Msa0457570 | Msa1437780 | 0.800078 | 1.705849e-48 | -8.615850e-47 |
| Msa0457570 | Msa1437810 | 0.849527 | 3.054884e-60 | -8.615850e-47 |
| Msa0457570 | Msa1440430 | 0.830018 | 3.718997e-55 | -8.615850e-47 |
| Msa0457570 | Msa1440630 | 0.832803 | 7.675603e-56 | -8.615850e-47 |
| Msa0457570 | Msa1445530 | 0.802442 | 5.598561e-49 | -8.615850e-47 |
| Msa0457570 | Msa1450190 | 0.806694 | 7.263632e-50 | -8.615850e-47 |
| Msa0457570 | Msa1451820 | 0.812016 | 5.240482e-51 | -8.615850e-47 |
| Msa0457570 | Msa1454500 | 0.828005 | 1.143280e-54 | -8.615850e-47 |
| Msa0241750 | Msa0457570 | 0.813776 | 2.157242e-51 | -8.615850e-47 |
| Msa0256980 | Msa0457570 | 0.802082 | 6.640257e-49 | -8.615850e-47 |
| Msa0262750 | Msa0457570 | 0.829975 | 3.809678e-55 | -8.615850e-47 |
| Msa0284800 | Msa0457570 | 0.872400 | 3.275213e-67 | -8.615850e-47 |
| Msa0296300 | Msa0457570 | 0.803076 | 4.142216e-49 | -8.615850e-47 |
| Msa0300470 | Msa0457570 | 0.808490 | 3.018806e-50 | -8.615850e-47 |
| Msa0300680 | Msa0457570 | 0.804452 | 2.146021e-49 | -8.615850e-47 |
| Msa0307670 | Msa0457570 | 0.836418 | 9.466382e-57 | -8.615850e-47 |
| Msa0313900 | Msa0457570 | 0.830490 | 2.852282e-55 | -8.615850e-47 |
| Msa0330520 | Msa0457570 | 0.864088 | 1.563565e-64 | -8.615850e-47 |
| Msa0337970 | Msa0457570 | 0.821611 | 3.682411e-53 | -8.615850e-47 |
| Msa0347780 | Msa0457570 | 0.801353 | 9.372976e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0457570 | MtrunA17_Chr3g0104551 | 95.513 | 156 | 7 | 0 | 1 | 156 | 1 | 156 | 2.04e-102 | 318 |
| Msa0457570 | MtrunA17_Chr3g0111621 | 72.932 | 133 | 28 | 2 | 160 | 285 | 2 | 133 | 4.89e-55 | 174 |
| Msa0457570 | MtrunA17_Chr8g0336641 | 72.932 | 133 | 28 | 2 | 160 | 285 | 2 | 133 | 4.89e-55 | 174 |
| Msa0457570 | MtrunA17_Chr4g0011951 | 72.180 | 133 | 29 | 2 | 160 | 285 | 2 | 133 | 4.89e-55 | 174 |
| Msa0457570 | MtrunA17_Chr1g0149321 | 72.932 | 133 | 28 | 2 | 160 | 285 | 2 | 133 | 4.89e-55 | 174 |
| Msa0457570 | MtrunA17_Chr5g0427451 | 72.932 | 133 | 28 | 2 | 160 | 285 | 2 | 133 | 7.80e-55 | 174 |
| Msa0457570 | MtrunA17_Chr5g0434041 | 75.188 | 133 | 25 | 2 | 160 | 285 | 2 | 133 | 3.88e-54 | 172 |
| Msa0457570 | MtrunA17_Chr3g0089801 | 74.436 | 133 | 26 | 2 | 160 | 285 | 2 | 133 | 8.03e-54 | 171 |
| Msa0457570 | MtrunA17_Chr3g0084951 | 69.925 | 133 | 32 | 2 | 160 | 285 | 2 | 133 | 4.86e-48 | 156 |
| Msa0457570 | MtrunA17_Chr1g0207591 | 69.925 | 133 | 32 | 2 | 160 | 285 | 2 | 133 | 4.86e-48 | 156 |
| Msa0457570 | MtrunA17_Chr4g0004731 | 69.173 | 133 | 33 | 2 | 160 | 285 | 2 | 133 | 5.25e-47 | 154 |
| Msa0457570 | MtrunA17_Chr1g0175371 | 77.119 | 118 | 19 | 2 | 175 | 285 | 1 | 117 | 1.71e-45 | 149 |
| Msa0457570 | MtrunA17_Chr3g0128191 | 76.271 | 118 | 20 | 2 | 175 | 285 | 1 | 117 | 8.36e-45 | 147 |
| Msa0457570 | MtrunA17_Chr1g0207621 | 76.271 | 118 | 20 | 2 | 175 | 285 | 1 | 117 | 8.92e-45 | 147 |
| Msa0457570 | MtrunA17_Chr3g0105531 | 81.633 | 98 | 18 | 0 | 188 | 285 | 14 | 111 | 6.52e-44 | 145 |
| Msa0457570 | MtrunA17_Chr2g0298121 | 48.408 | 157 | 80 | 1 | 1 | 156 | 1 | 157 | 1.43e-43 | 158 |
| Msa0457570 | MtrunA17_Chr1g0173371 | 48.026 | 152 | 78 | 1 | 6 | 156 | 6 | 157 | 1.43e-39 | 147 |
| Msa0457570 | MtrunA17_Chr7g0257461 | 47.771 | 157 | 81 | 1 | 1 | 156 | 1 | 157 | 5.35e-39 | 145 |
| Msa0457570 | MtrunA17_Chr7g0257461 | 29.752 | 121 | 82 | 1 | 4 | 124 | 381 | 498 | 2.00e-11 | 64.3 |
| Msa0457570 | MtrunA17_Chr7g0244351 | 86.207 | 87 | 12 | 0 | 188 | 274 | 14 | 100 | 2.49e-36 | 125 |
| Msa0457570 | MtrunA17_Chr2g0289261 | 69.231 | 104 | 24 | 2 | 175 | 271 | 1 | 103 | 3.72e-36 | 125 |
| Msa0457570 | MtrunA17_Chr3g0099681 | 64.493 | 138 | 35 | 3 | 161 | 285 | 3 | 139 | 8.58e-36 | 125 |
| Msa0457570 | MtrunA17_Chr6g0469641 | 72.115 | 104 | 21 | 2 | 175 | 271 | 1 | 103 | 7.62e-28 | 103 |
| Msa0457570 | MtrunA17_Chr2g0314341 | 71.277 | 94 | 19 | 2 | 188 | 274 | 14 | 106 | 4.77e-27 | 102 |
| Msa0457570 | MtrunA17_Chr2g0294211 | 71.277 | 94 | 19 | 2 | 188 | 274 | 14 | 106 | 4.77e-27 | 102 |
| Msa0457570 | MtrunA17_Chr3g0105061 | 71.277 | 94 | 19 | 2 | 188 | 274 | 14 | 106 | 4.77e-27 | 102 |
| Msa0457570 | MtrunA17_Chr6g0449671 | 71.277 | 94 | 19 | 2 | 188 | 274 | 14 | 106 | 4.77e-27 | 102 |
| Msa0457570 | MtrunA17_Chr4g0063441 | 69.663 | 89 | 19 | 2 | 190 | 271 | 16 | 103 | 6.17e-26 | 99.0 |
| Msa0457570 | MtrunA17_Chr3g0134251 | 71.429 | 91 | 18 | 2 | 188 | 271 | 14 | 103 | 8.47e-26 | 98.6 |
| Msa0457570 | MtrunA17_Chr3g0128261 | 71.429 | 91 | 18 | 2 | 188 | 271 | 14 | 103 | 8.47e-26 | 98.6 |
| Msa0457570 | MtrunA17_Chr3g0127191 | 71.429 | 91 | 18 | 2 | 188 | 271 | 14 | 103 | 8.47e-26 | 98.6 |
| Msa0457570 | MtrunA17_Chr2g0305811 | 71.429 | 91 | 18 | 2 | 188 | 271 | 14 | 103 | 8.47e-26 | 98.6 |
| Msa0457570 | MtrunA17_Chr1g0184921 | 71.429 | 91 | 18 | 2 | 188 | 271 | 14 | 103 | 1.02e-25 | 98.6 |
| Msa0457570 | MtrunA17_Chr4g0072061 | 52.128 | 94 | 44 | 1 | 57 | 149 | 6 | 99 | 2.01e-25 | 103 |
| Msa0457570 | MtrunA17_Chr4g0003171 | 71.429 | 91 | 18 | 2 | 188 | 271 | 14 | 103 | 2.19e-25 | 97.8 |
| Msa0457570 | MtrunA17_Chr6g0456441 | 71.429 | 91 | 18 | 2 | 188 | 271 | 14 | 103 | 2.33e-25 | 97.4 |
| Msa0457570 | MtrunA17_Chr3g0095701 | 70.330 | 91 | 19 | 2 | 188 | 271 | 14 | 103 | 3.20e-25 | 97.1 |
| Msa0457570 | MtrunA17_Chr4g0043361 | 52.846 | 123 | 44 | 3 | 176 | 285 | 4 | 125 | 1.56e-19 | 82.4 |
| Msa0457570 | MtrunA17_Chr1g0170191 | 74.194 | 62 | 10 | 1 | 160 | 215 | 2 | 63 | 3.97e-12 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0457570 | AT2G29890.4 | 57.051 | 156 | 67 | 0 | 1 | 156 | 1 | 156 | 2.78e-57 | 197 |
| Msa0457570 | AT2G29890.3 | 57.051 | 156 | 67 | 0 | 1 | 156 | 1 | 156 | 2.87e-57 | 197 |
| Msa0457570 | AT2G29890.2 | 57.051 | 156 | 67 | 0 | 1 | 156 | 1 | 156 | 3.25e-57 | 197 |
| Msa0457570 | AT2G29890.1 | 57.051 | 156 | 67 | 0 | 1 | 156 | 1 | 156 | 3.28e-57 | 197 |
| Msa0457570 | AT2G29890.5 | 57.051 | 156 | 67 | 0 | 1 | 156 | 1 | 156 | 3.28e-57 | 197 |
| Msa0457570 | AT4G30160.2 | 48.408 | 157 | 80 | 1 | 1 | 156 | 1 | 157 | 2.11e-43 | 158 |
| Msa0457570 | AT4G30160.3 | 48.408 | 157 | 80 | 1 | 1 | 156 | 1 | 157 | 2.22e-43 | 158 |
| Msa0457570 | AT4G30160.4 | 48.408 | 157 | 80 | 1 | 1 | 156 | 1 | 157 | 2.22e-43 | 158 |
| Msa0457570 | AT4G30160.1 | 48.408 | 157 | 80 | 1 | 1 | 156 | 1 | 157 | 2.22e-43 | 158 |
| Msa0457570 | AT2G41740.2 | 50.980 | 153 | 74 | 1 | 5 | 156 | 3 | 155 | 8.47e-42 | 154 |
| Msa0457570 | AT2G41740.1 | 50.980 | 153 | 74 | 1 | 5 | 156 | 3 | 155 | 8.47e-42 | 154 |
| Msa0457570 | AT3G57410.4 | 51.634 | 153 | 73 | 1 | 5 | 156 | 5 | 157 | 3.52e-41 | 152 |
| Msa0457570 | AT3G57410.1 | 51.634 | 153 | 73 | 1 | 5 | 156 | 5 | 157 | 3.52e-41 | 152 |
| Msa0457570 | AT3G57410.9 | 51.634 | 153 | 73 | 1 | 5 | 156 | 5 | 157 | 3.52e-41 | 152 |
| Msa0457570 | AT3G57410.5 | 51.634 | 153 | 73 | 1 | 5 | 156 | 5 | 157 | 3.52e-41 | 152 |
| Msa0457570 | AT3G57410.3 | 51.634 | 153 | 73 | 1 | 5 | 156 | 5 | 157 | 3.52e-41 | 152 |
| Msa0457570 | AT3G57410.2 | 51.634 | 153 | 73 | 1 | 5 | 156 | 5 | 157 | 3.52e-41 | 152 |
| Msa0457570 | AT3G57410.7 | 51.634 | 153 | 73 | 1 | 5 | 156 | 5 | 157 | 3.52e-41 | 152 |
| Msa0457570 | AT3G57410.8 | 51.634 | 153 | 73 | 1 | 5 | 156 | 5 | 157 | 3.52e-41 | 152 |
| Msa0457570 | AT3G57410.10 | 51.634 | 153 | 73 | 1 | 5 | 156 | 5 | 157 | 5.29e-41 | 150 |
| Msa0457570 | AT3G57410.6 | 51.634 | 153 | 73 | 1 | 5 | 156 | 5 | 157 | 6.30e-41 | 151 |
| Msa0457570 | AT5G57320.2 | 46.497 | 157 | 83 | 1 | 1 | 156 | 1 | 157 | 1.32e-39 | 147 |
| Msa0457570 | AT5G57320.1 | 46.497 | 157 | 83 | 1 | 1 | 156 | 1 | 157 | 1.32e-39 | 147 |
| Msa0457570 | AT2G10975.1 | 44.915 | 118 | 45 | 2 | 174 | 285 | 28 | 131 | 1.28e-15 | 72.4 |
| Msa0457570 | AT3G29645.1 | 47.312 | 93 | 48 | 1 | 193 | 285 | 45 | 136 | 3.30e-14 | 68.6 |
Find 83 sgRNAs with CRISPR-Local
Find 170 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATAATAGGCATTGGCTTTA+TGG | 0.089873 | 3_3:+52566640 | None:intergenic |
| CTCATTATGACATTCATTAT+TGG | 0.159008 | 3_3:-52566102 | Msa0457570:CDS |
| GAATGTTCAATTTACTTTAA+AGG | 0.213530 | 3_3:-52565718 | Msa0457570:CDS |
| ATAGAAACTTCTGTGATTCT+TGG | 0.247886 | 3_3:+52565862 | None:intergenic |
| GAATGGTCATTTATATTTGA+TGG | 0.284489 | 3_3:+52567839 | None:intergenic |
| CCACGTTATGGTAGTCAAAT+AGG | 0.299743 | 3_3:-52565669 | Msa0457570:CDS |
| AAAAGAGTTGTTGGAAAAGT+TGG | 0.329591 | 3_3:-52565355 | Msa0457570:CDS |
| TTAGCTGCCTCCCTACCTAT+TGG | 0.330747 | 3_3:+52565576 | None:intergenic |
| TCCAAGTCTTTATTGATAAT+AGG | 0.343729 | 3_3:+52566626 | None:intergenic |
| GATCGTGCAGCGTTCAATAT+AGG | 0.353176 | 3_3:-52565896 | Msa0457570:CDS |
| CAGAACTATGTATGCACTTC+CGG | 0.355721 | 3_3:+52566244 | None:intergenic |
| CCGGTCATCGAGATGCTCTT+CGG | 0.370153 | 3_3:+52565380 | None:intergenic |
| TTCTCAGTGGATTGGAAGTC+TGG | 0.374280 | 3_3:-52566325 | Msa0457570:intron |
| TATGACATTCATTATTGGTT+GGG | 0.378347 | 3_3:-52566097 | Msa0457570:CDS |
| AGAGTTCATCTTGGTGCAAC+AGG | 0.385758 | 3_3:-52565448 | Msa0457570:CDS |
| TGAAGTAAACACTCCTTCAA+TGG | 0.402679 | 3_3:+52565815 | None:intergenic |
| TGCTGCTGCCTTGGAGGAGG+TGG | 0.404578 | 3_3:-52565526 | Msa0457570:CDS |
| CAAGGATGCTGCTGCCTTGG+AGG | 0.418485 | 3_3:-52565532 | Msa0457570:CDS |
| CTCCGTGATCAACCACGTTA+TGG | 0.423789 | 3_3:-52565681 | Msa0457570:CDS |
| CTTGAGTTGGATGCAGCCTT+AGG | 0.425710 | 3_3:-52565918 | Msa0457570:CDS |
| AAGCAAGGATGCTGCTGCCT+TGG | 0.426063 | 3_3:-52565535 | Msa0457570:CDS |
| TGCCTTGGAGGAGGTGGAAA+AGG | 0.440778 | 3_3:-52565520 | Msa0457570:CDS |
| GGATCTAGTGCTCGTCCAAT+AGG | 0.443830 | 3_3:-52565591 | Msa0457570:CDS |
| AATTTACTTTAAAGGAAGAA+TGG | 0.457064 | 3_3:-52565710 | Msa0457570:CDS |
| ACTTTATATTCTCAGTGGAT+TGG | 0.458509 | 3_3:-52566333 | Msa0457570:intron |
| ATCGTGCAGCGTTCAATATA+GGG | 0.463628 | 3_3:-52565895 | Msa0457570:CDS |
| CAAGTGTTGCTTTGAGTTGG+TGG | 0.464162 | 3_3:-52566674 | Msa0457570:five_prime_UTR |
| AGTCAAATAGGAGGAAATGT+TGG | 0.466610 | 3_3:-52565657 | Msa0457570:CDS |
| GGATGCTGCTGCCTTGGAGG+AGG | 0.471304 | 3_3:-52565529 | Msa0457570:CDS |
| CCTTGTTTAATACCCATTGA+AGG | 0.471785 | 3_3:-52565828 | Msa0457570:CDS |
| GAAGTAAACACTCCTTCAAT+GGG | 0.472686 | 3_3:+52565816 | None:intergenic |
| TACTATGTGGCAAATGTGAA+TGG | 0.475240 | 3_3:-52567810 | Msa0457570:five_prime_UTR |
| ACAATTGAAAGAGTTCATCT+TGG | 0.477117 | 3_3:-52565457 | Msa0457570:CDS |
| TTATGACATTCATTATTGGT+TGG | 0.487003 | 3_3:-52566098 | Msa0457570:CDS |
| AGTCAGCCTGTACACATGTA+AGG | 0.489217 | 3_3:-52565763 | Msa0457570:CDS |
| TCAAAGCAAGGGAATTTGAA+TGG | 0.490607 | 3_3:-52565795 | Msa0457570:CDS |
| ATAGGAGGAAATGTTGGGTC+AGG | 0.490770 | 3_3:-52565651 | Msa0457570:CDS |
| GCTCCTGCAGTTTGAAATGC+AGG | 0.491293 | 3_3:+52566602 | None:intergenic |
| ACCATTCTTGCTTTACTATG+TGG | 0.492980 | 3_3:-52567823 | Msa0457570:five_prime_UTR |
| GCCACATAGTAAAGCAAGAA+TGG | 0.494650 | 3_3:+52567822 | None:intergenic |
| GTTGGGAAATGACACAAAGA+AGG | 0.494738 | 3_3:-52566080 | Msa0457570:intron |
| CGAAGGTCTGACTCTGACAC+TGG | 0.501618 | 3_3:+52566278 | None:intergenic |
| GTCAAATAGGAGGAAATGTT+GGG | 0.507942 | 3_3:-52565656 | Msa0457570:CDS |
| TTGAACGCTGCACGATCCTA+AGG | 0.510999 | 3_3:+52565902 | None:intergenic |
| TTTGCAGGTGGATTCAAGCT+TGG | 0.511419 | 3_3:-52565955 | Msa0457570:intron |
| GATCCTGCATTTCAAACTGC+AGG | 0.511602 | 3_3:-52566605 | Msa0457570:CDS |
| CCTTCAATGGGTATTAAACA+AGG | 0.525933 | 3_3:+52565828 | None:intergenic |
| GCCTATTATCAATAAAGACT+TGG | 0.530965 | 3_3:-52566627 | Msa0457570:CDS |
| CTGACACTGGCACCAACTGT+TGG | 0.535317 | 3_3:+52566291 | None:intergenic |
| CCGAAGAGCATCTCGATGAC+CGG | 0.535989 | 3_3:-52565380 | Msa0457570:CDS |
| TCTTTATTGATAATAGGCAT+TGG | 0.537651 | 3_3:+52566632 | None:intergenic |
| AATCAAGTGTTGCTTTGAGT+TGG | 0.541137 | 3_3:-52566677 | Msa0457570:five_prime_UTR |
| GGTTGAATTCAAAGAAATCA+AGG | 0.543930 | 3_3:-52565493 | Msa0457570:CDS |
| GACCTTCGAAAATTCTATGC+CGG | 0.549137 | 3_3:-52566263 | Msa0457570:CDS |
| CTAGTGCTCGTCCAATAGGT+AGG | 0.553012 | 3_3:-52565587 | Msa0457570:CDS |
| TACATGTGTACAGGCTGACT+TGG | 0.553621 | 3_3:+52565766 | None:intergenic |
| GTTCAATATAGGGAAATTCA+AGG | 0.553914 | 3_3:-52565885 | Msa0457570:CDS |
| GGTCTCCCTTACATGTGTAC+AGG | 0.555899 | 3_3:+52565757 | None:intergenic |
| ATCAGACAAAGCACTTGAGT+TGG | 0.566926 | 3_3:-52565931 | Msa0457570:CDS |
| GGAGTGTTTACTTCAAAGCA+AGG | 0.574599 | 3_3:-52565807 | Msa0457570:CDS |
| TACCATAACGTGGTTGATCA+CGG | 0.578164 | 3_3:+52565679 | None:intergenic |
| TGGAGGAGGTGGAAAAGGAG+TGG | 0.580098 | 3_3:-52565515 | Msa0457570:CDS |
| GGTTCAACAGAAAACTGAGA+AGG | 0.585022 | 3_3:+52567719 | None:intergenic |
| CAATAATGAATGTCATAATG+AGG | 0.586659 | 3_3:+52566103 | None:intergenic |
| ACTATGTGGCAAATGTGAAT+GGG | 0.589039 | 3_3:-52567809 | Msa0457570:five_prime_UTR |
| AATGTTGGGTCAGGAAGTAG+TGG | 0.595306 | 3_3:-52565642 | Msa0457570:CDS |
| CATTCTTCCCACATGCAACA+TGG | 0.607764 | 3_3:+52565736 | None:intergenic |
| TAGTGCTCGTCCAATAGGTA+GGG | 0.609095 | 3_3:-52565586 | Msa0457570:CDS |
| GTCAGCCTGTACACATGTAA+GGG | 0.612700 | 3_3:-52565762 | Msa0457570:CDS |
| AAAACTAAGAACAAGAGTGA+TGG | 0.613289 | 3_3:+52567747 | None:intergenic |
| AATGAATGTCATAATGAGGA+GGG | 0.613936 | 3_3:+52566107 | None:intergenic |
| TAATGAATGTCATAATGAGG+AGG | 0.621615 | 3_3:+52566106 | None:intergenic |
| AGATCTCACGAGGACTCTGT+AGG | 0.621974 | 3_3:-52565612 | Msa0457570:CDS |
| GGAGGAGGTGGAAAAGGAGT+GGG | 0.622268 | 3_3:-52565514 | Msa0457570:CDS |
| TGCTCGTCCAATAGGTAGGG+AGG | 0.627205 | 3_3:-52565583 | Msa0457570:CDS |
| GACAAAGAAAGAACAAAACA+TGG | 0.629176 | 3_3:+52567777 | None:intergenic |
| CGTTATGGTAGTCAAATAGG+AGG | 0.629909 | 3_3:-52565666 | Msa0457570:CDS |
| CCTATTTGACTACCATAACG+TGG | 0.638091 | 3_3:+52565669 | None:intergenic |
| GAGTGTTTACTTCAAAGCAA+GGG | 0.638785 | 3_3:-52565806 | Msa0457570:CDS |
| AAGGGAGACCATGTTGCATG+TGG | 0.654396 | 3_3:-52565744 | Msa0457570:CDS |
| GTGTATTGAAAACCAACAGT+TGG | 0.696651 | 3_3:-52566303 | Msa0457570:CDS |
| AGGGAGACCATGTTGCATGT+GGG | 0.725483 | 3_3:-52565743 | Msa0457570:CDS |
| TGGATCTAAGAGATCTCACG+AGG | 0.728051 | 3_3:-52565622 | Msa0457570:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTGATTCTATAATTATTAC+CGG | - | chr3_3:52566310-52566329 | Msa0457570:CDS | 15.0% |
| !! | TATAGTAAATATATCAATGT+AGG | + | chr3_3:52566439-52566458 | None:intergenic | 15.0% |
| !! | ATTTACTATATTAAAACTTC+TGG | - | chr3_3:52566449-52566468 | Msa0457570:intron | 15.0% |
| !! | ATAGATGAAAAAAAGTCAAA+GGG | + | chr3_3:52565548-52565567 | None:intergenic | 20.0% |
| !!! | AGAAAAAATTCTGAAAATTG+AGG | - | chr3_3:52565684-52565703 | Msa0457570:CDS | 20.0% |
| !! | TTTCAAAGAAAATCATTGTA+AGG | + | chr3_3:52566625-52566644 | None:intergenic | 20.0% |
| !!! | CCAGAAATTTTAAATACTAA+GGG | + | chr3_3:52566765-52566784 | None:intergenic | 20.0% |
| !!! | ACCAGAAATTTTAAATACTA+AGG | + | chr3_3:52566766-52566785 | None:intergenic | 20.0% |
| !! | GAATGTTCAATTTACTTTAA+AGG | - | chr3_3:52567473-52567492 | Msa0457570:intron | 20.0% |
| !!! | AATTTACTTTAAAGGAAGAA+TGG | - | chr3_3:52567481-52567500 | Msa0457570:intron | 20.0% |
| ! | GAATGGTCATTTATATTTGA+TGG | + | chr3_3:52565355-52565374 | None:intergenic | 25.0% |
| ! | TGATTATATGATCTCATATC+TGG | - | chr3_3:52565501-52565520 | Msa0457570:CDS | 25.0% |
| ! | GATAGATGAAAAAAAGTCAA+AGG | + | chr3_3:52565549-52565568 | None:intergenic | 25.0% |
| ! | AAAAGTGATGATCTCAAATT+TGG | + | chr3_3:52565612-52565631 | None:intergenic | 25.0% |
| !! | GATGTTTGAAATTTGATGTA+TGG | - | chr3_3:52565781-52565800 | Msa0457570:CDS | 25.0% |
| !! | ATAAACAATTGTTTTCACCT+AGG | + | chr3_3:52565871-52565890 | None:intergenic | 25.0% |
| !! | TCTTTATTGATAATAGGCAT+TGG | + | chr3_3:52566562-52566581 | None:intergenic | 25.0% |
| !! | TCCAAGTCTTTATTGATAAT+AGG | + | chr3_3:52566568-52566587 | None:intergenic | 25.0% |
| ! | AGAAAATCATTGTAAGGATA+CGG | + | chr3_3:52566619-52566638 | None:intergenic | 25.0% |
| !! | CCCTTAGTATTTAAAATTTC+TGG | - | chr3_3:52566762-52566781 | Msa0457570:intron | 25.0% |
| ! | ACTTAACTTTATATTCTCAG+TGG | - | chr3_3:52566853-52566872 | Msa0457570:intron | 25.0% |
| ! | CAATAATGAATGTCATAATG+AGG | + | chr3_3:52567091-52567110 | None:intergenic | 25.0% |
| ! | CTCATTATGACATTCATTAT+TGG | - | chr3_3:52567089-52567108 | Msa0457570:intron | 25.0% |
| ! | TTATGACATTCATTATTGGT+TGG | - | chr3_3:52567093-52567112 | Msa0457570:intron | 25.0% |
| !! | TATGACATTCATTATTGGTT+GGG | - | chr3_3:52567094-52567113 | Msa0457570:intron | 25.0% |
| !! | AGAAGGTTTGTATTATTTCT+TGG | - | chr3_3:52567128-52567147 | Msa0457570:intron | 25.0% |
| ! | AAAAGGTAAAAAGAAAAGCA+AGG | - | chr3_3:52567641-52567660 | Msa0457570:intron | 25.0% |
| GACAAAGAAAGAACAAAACA+TGG | + | chr3_3:52565417-52565436 | None:intergenic | 30.0% | |
| AAAACTAAGAACAAGAGTGA+TGG | + | chr3_3:52565447-52565466 | None:intergenic | 30.0% | |
| GAGATCATATAATCATACCT+TGG | + | chr3_3:52565496-52565515 | None:intergenic | 30.0% | |
| !! | ATCATCACTTTTCTTGACTT+TGG | - | chr3_3:52565620-52565639 | Msa0457570:CDS | 30.0% |
| !! | GGATTGTGTTTTTATGTCTT+AGG | - | chr3_3:52565641-52565660 | Msa0457570:CDS | 30.0% |
| !!! | TCTTAGGCTAGTTTTTGTTT+TGG | - | chr3_3:52565657-52565676 | Msa0457570:CDS | 30.0% |
| TTCAAACATCTACATCTACT+GGG | + | chr3_3:52565771-52565790 | None:intergenic | 30.0% | |
| TTTCAAACATCTACATCTAC+TGG | + | chr3_3:52565772-52565791 | None:intergenic | 30.0% | |
| TTATCAAGCTGAATTGATGT+TGG | - | chr3_3:52565844-52565863 | Msa0457570:CDS | 30.0% | |
| TATCAAGCTGAATTGATGTT+GGG | - | chr3_3:52565845-52565864 | Msa0457570:CDS | 30.0% | |
| GAACAAGTTTCTTATTACCA+TGG | + | chr3_3:52565941-52565960 | None:intergenic | 30.0% | |
| GACTTATTTGCATAGAACTA+TGG | - | chr3_3:52565995-52566014 | Msa0457570:intron | 30.0% | |
| ! | TTTAGTATTTTACAGTCGAG+TGG | - | chr3_3:52566018-52566037 | Msa0457570:intron | 30.0% |
| TCTATAATTATTACCGGTGT+CGG | - | chr3_3:52566316-52566335 | Msa0457570:CDS | 30.0% | |
| CTATGCAAATAATCTCAAAC+AGG | + | chr3_3:52566406-52566425 | None:intergenic | 30.0% | |
| GCCTATTATCAATAAAGACT+TGG | - | chr3_3:52566564-52566583 | Msa0457570:intron | 30.0% | |
| AATTGCCTTACAATTTGTGT+CGG | - | chr3_3:52566643-52566662 | Msa0457570:exon | 30.0% | |
| AGACATTCATTCAATCGAAA+AGG | + | chr3_3:52566694-52566713 | None:intergenic | 30.0% | |
| ACTTTATATTCTCAGTGGAT+TGG | - | chr3_3:52566858-52566877 | Msa0457570:intron | 30.0% | |
| TGACATTTCATAGGTTTAAG+AGG | + | chr3_3:52567009-52567028 | None:intergenic | 30.0% | |
| ! | TCGAACATTTTACATGTTCT+CGG | - | chr3_3:52567035-52567054 | Msa0457570:intron | 30.0% |
| AATGAATGTCATAATGAGGA+GGG | + | chr3_3:52567087-52567106 | None:intergenic | 30.0% | |
| TAATGAATGTCATAATGAGG+AGG | + | chr3_3:52567088-52567107 | None:intergenic | 30.0% | |
| GTTCAATATAGGGAAATTCA+AGG | - | chr3_3:52567306-52567325 | Msa0457570:intron | 30.0% | |
| ATAGAAACTTCTGTGATTCT+TGG | + | chr3_3:52567332-52567351 | None:intergenic | 30.0% | |
| GGTTGAATTCAAAGAAATCA+AGG | - | chr3_3:52567698-52567717 | Msa0457570:intron | 30.0% | |
| ACAATTGAAAGAGTTCATCT+TGG | - | chr3_3:52567734-52567753 | Msa0457570:five_prime_UTR | 30.0% | |
| !!! | TTTCCAACAACTCTTTTTTC+CGG | + | chr3_3:52567833-52567852 | None:intergenic | 30.0% |
| AAAAGAGTTGTTGGAAAAGT+TGG | - | chr3_3:52567836-52567855 | Msa0457570:five_prime_UTR | 30.0% | |
| ACCATTCTTGCTTTACTATG+TGG | - | chr3_3:52565368-52565387 | Msa0457570:CDS | 35.0% | |
| TACTATGTGGCAAATGTGAA+TGG | - | chr3_3:52565381-52565400 | Msa0457570:CDS | 35.0% | |
| ACTATGTGGCAAATGTGAAT+GGG | - | chr3_3:52565382-52565401 | Msa0457570:CDS | 35.0% | |
| ! | GTTTTCTGAGTCAACAGTTT+AGG | - | chr3_3:52565710-52565729 | Msa0457570:CDS | 35.0% |
| ATTATGCTGCTCAAGTAACT+AGG | + | chr3_3:52565917-52565936 | None:intergenic | 35.0% | |
| AATCCAGGATTAAGATATGC+AGG | + | chr3_3:52566487-52566506 | None:intergenic | 35.0% | |
| ACTTGATTATTCTGCAATCC+AGG | + | chr3_3:52566502-52566521 | None:intergenic | 35.0% | |
| !! | AATCAAGTGTTGCTTTGAGT+TGG | - | chr3_3:52566514-52566533 | Msa0457570:intron | 35.0% |
| !! | GATAATAGGCATTGGCTTTA+TGG | + | chr3_3:52566554-52566573 | None:intergenic | 35.0% |
| ! | GACCTAATGCAAGTTGAATT+AGG | + | chr3_3:52566669-52566688 | None:intergenic | 35.0% |
| GTGTATTGAAAACCAACAGT+TGG | - | chr3_3:52566888-52566907 | Msa0457570:intron | 35.0% | |
| ATAGGTTTAAGAGGATCAAC+AGG | + | chr3_3:52567000-52567019 | None:intergenic | 35.0% | |
| CGAGATCAATGACATTTCAT+AGG | + | chr3_3:52567018-52567037 | None:intergenic | 35.0% | |
| ! | TTTTACATGTTCTCGGAAAC+AGG | - | chr3_3:52567042-52567061 | Msa0457570:intron | 35.0% |
| TTGGTTTACTATCTTGCTTG+TGG | - | chr3_3:52567147-52567166 | Msa0457570:intron | 35.0% | |
| ! | GTGCTGATCATGATCTTTAA+TGG | + | chr3_3:52567196-52567215 | None:intergenic | 35.0% |
| CCTTCAATGGGTATTAAACA+AGG | + | chr3_3:52567366-52567385 | None:intergenic | 35.0% | |
| ! | CCTTGTTTAATACCCATTGA+AGG | - | chr3_3:52567363-52567382 | Msa0457570:intron | 35.0% |
| GAAGTAAACACTCCTTCAAT+GGG | + | chr3_3:52567378-52567397 | None:intergenic | 35.0% | |
| TGAAGTAAACACTCCTTCAA+TGG | + | chr3_3:52567379-52567398 | None:intergenic | 35.0% | |
| GAGTGTTTACTTCAAAGCAA+GGG | - | chr3_3:52567385-52567404 | Msa0457570:intron | 35.0% | |
| TCAAAGCAAGGGAATTTGAA+TGG | - | chr3_3:52567396-52567415 | Msa0457570:intron | 35.0% | |
| AGTCAAATAGGAGGAAATGT+TGG | - | chr3_3:52567534-52567553 | Msa0457570:intron | 35.0% | |
| GTCAAATAGGAGGAAATGTT+GGG | - | chr3_3:52567535-52567554 | Msa0457570:intron | 35.0% | |
| GCCACATAGTAAAGCAAGAA+TGG | + | chr3_3:52565372-52565391 | None:intergenic | 40.0% | |
| GGTTCAACAGAAAACTGAGA+AGG | + | chr3_3:52565475-52565494 | None:intergenic | 40.0% | |
| ! | CTCAGTTTTCTGTTGAACCA+AGG | - | chr3_3:52565476-52565495 | Msa0457570:CDS | 40.0% |
| ! | CAACAGTTTAGGTTTCTTGC+TGG | - | chr3_3:52565721-52565740 | Msa0457570:CDS | 40.0% |
| TCTACATCTACTGGGAAAGT+GGG | + | chr3_3:52565763-52565782 | None:intergenic | 40.0% | |
| ATCTACATCTACTGGGAAAG+TGG | + | chr3_3:52565764-52565783 | None:intergenic | 40.0% | |
| !! | GAAGAGTGTTGCAATTCACA+TGG | - | chr3_3:52565817-52565836 | Msa0457570:CDS | 40.0% |
| CTTCTAATTGAAGACGTGTC+TGG | + | chr3_3:52566205-52566224 | None:intergenic | 40.0% | |
| !! | AAGTGTCGATGCTATAGAGA+CGG | - | chr3_3:52566222-52566241 | Msa0457570:intron | 40.0% |
| TGTCAACGTGTATTGTACAC+CGG | + | chr3_3:52566270-52566289 | None:intergenic | 40.0% | |
| GTGTTAGTGTCTATGAGACA+TGG | + | chr3_3:52566363-52566382 | None:intergenic | 40.0% | |
| TAGCCTGCATATCTTAATCC+TGG | - | chr3_3:52566481-52566500 | Msa0457570:intron | 40.0% | |
| TTAGGCCGACACAAATTGTA+AGG | + | chr3_3:52566651-52566670 | None:intergenic | 40.0% | |
| GGCCTAATTCAACTTGCATT+AGG | - | chr3_3:52566664-52566683 | Msa0457570:five_prime_UTR | 40.0% | |
| GACCTTCGAAAATTCTATGC+CGG | - | chr3_3:52566928-52566947 | Msa0457570:intron | 40.0% | |
| ! | TTCCGGCATAGAATTTTCGA+AGG | + | chr3_3:52566933-52566952 | None:intergenic | 40.0% |
| CAGAACTATGTATGCACTTC+CGG | + | chr3_3:52566950-52566969 | None:intergenic | 40.0% | |
| !!! | TAATGAGGAGGGCCATTTTT+GGG | + | chr3_3:52567076-52567095 | None:intergenic | 40.0% |
| !! | ATAATGAGGAGGGCCATTTT+TGG | + | chr3_3:52567077-52567096 | None:intergenic | 40.0% |
| GTTGGGAAATGACACAAAGA+AGG | - | chr3_3:52567111-52567130 | Msa0457570:intron | 40.0% | |
| ! | TCATGATCAGCACTTTTCAC+CGG | - | chr3_3:52567203-52567222 | Msa0457570:intron | 40.0% |
| ACCTGCAAATACATAACTCC+CGG | + | chr3_3:52567225-52567244 | None:intergenic | 40.0% | |
| ! | ATCAGACAAAGCACTTGAGT+TGG | - | chr3_3:52567260-52567279 | Msa0457570:intron | 40.0% |
| ATCGTGCAGCGTTCAATATA+GGG | - | chr3_3:52567296-52567315 | Msa0457570:intron | 40.0% | |
| ! | GGAGTGTTTACTTCAAAGCA+AGG | - | chr3_3:52567384-52567403 | Msa0457570:intron | 40.0% |
| TACCATAACGTGGTTGATCA+CGG | + | chr3_3:52567515-52567534 | None:intergenic | 40.0% | |
| CCTATTTGACTACCATAACG+TGG | + | chr3_3:52567525-52567544 | None:intergenic | 40.0% | |
| CCACGTTATGGTAGTCAAAT+AGG | - | chr3_3:52567522-52567541 | Msa0457570:intron | 40.0% | |
| CGTTATGGTAGTCAAATAGG+AGG | - | chr3_3:52567525-52567544 | Msa0457570:intron | 40.0% | |
| AGGGAGGCAGCTAAAAAAAA+AGG | - | chr3_3:52567624-52567643 | Msa0457570:intron | 40.0% | |
| TGACCGGAAAAAAGAGTTGT+TGG | - | chr3_3:52567827-52567846 | Msa0457570:five_prime_UTR | 40.0% | |
| GCTGCTCAAGTAACTAGGAA+GGG | + | chr3_3:52565912-52565931 | None:intergenic | 45.0% | |
| TGCTGCTCAAGTAACTAGGA+AGG | + | chr3_3:52565913-52565932 | None:intergenic | 45.0% | |
| ACTTGAGCAGCATAATGCCA+TGG | - | chr3_3:52565921-52565940 | Msa0457570:CDS | 45.0% | |
| TGTGTGTGTCAGTGCTTCAT+AGG | + | chr3_3:52566085-52566104 | None:intergenic | 45.0% | |
| TGTCAGTGTCGTGTTAGTGT+CGG | - | chr3_3:52566159-52566178 | Msa0457570:intron | 45.0% | |
| TGTCGGACATTGACACATGT+TGG | - | chr3_3:52566176-52566195 | Msa0457570:intron | 45.0% | |
| CTTCTGACTGAAGTTGTGTC+CGG | - | chr3_3:52566248-52566267 | Msa0457570:CDS | 45.0% | |
| TGTCTATGAGACATGGACAC+CGG | + | chr3_3:52566356-52566375 | None:intergenic | 45.0% | |
| !! | CAAGTGTTGCTTTGAGTTGG+TGG | - | chr3_3:52566517-52566536 | Msa0457570:intron | 45.0% |
| GATCCTGCATTTCAAACTGC+AGG | - | chr3_3:52566586-52566605 | Msa0457570:intron | 45.0% | |
| !! | TTCTCAGTGGATTGGAAGTC+TGG | - | chr3_3:52566866-52566885 | Msa0457570:intron | 45.0% |
| TACATGTTCTCGGAAACAGG+CGG | - | chr3_3:52567045-52567064 | Msa0457570:intron | 45.0% | |
| ! | CAGGCGGTTTTTCCCAAAAA+TGG | - | chr3_3:52567061-52567080 | Msa0457570:intron | 45.0% |
| ! | CATGATCAGCACTTTTCACC+GGG | - | chr3_3:52567204-52567223 | Msa0457570:intron | 45.0% |
| ACCGGGAGTTATGTATTTGC+AGG | - | chr3_3:52567221-52567240 | Msa0457570:intron | 45.0% | |
| GGGAGTTATGTATTTGCAGG+TGG | - | chr3_3:52567224-52567243 | Msa0457570:intron | 45.0% | |
| ! | TTTGCAGGTGGATTCAAGCT+TGG | - | chr3_3:52567236-52567255 | Msa0457570:intron | 45.0% |
| GATCGTGCAGCGTTCAATAT+AGG | - | chr3_3:52567295-52567314 | Msa0457570:intron | 45.0% | |
| TACATGTGTACAGGCTGACT+TGG | + | chr3_3:52567428-52567447 | None:intergenic | 45.0% | |
| AGTCAGCCTGTACACATGTA+AGG | - | chr3_3:52567428-52567447 | Msa0457570:intron | 45.0% | |
| GTCAGCCTGTACACATGTAA+GGG | - | chr3_3:52567429-52567448 | Msa0457570:intron | 45.0% | |
| CATTCTTCCCACATGCAACA+TGG | + | chr3_3:52567458-52567477 | None:intergenic | 45.0% | |
| ATAGGAGGAAATGTTGGGTC+AGG | - | chr3_3:52567540-52567559 | Msa0457570:intron | 45.0% | |
| AATGTTGGGTCAGGAAGTAG+TGG | - | chr3_3:52567549-52567568 | Msa0457570:intron | 45.0% | |
| TGGATCTAAGAGATCTCACG+AGG | - | chr3_3:52567569-52567588 | Msa0457570:intron | 45.0% | |
| TAGTGCTCGTCCAATAGGTA+GGG | - | chr3_3:52567605-52567624 | Msa0457570:intron | 45.0% | |
| ! | AGAGTTCATCTTGGTGCAAC+AGG | - | chr3_3:52567743-52567762 | Msa0457570:five_prime_UTR | 45.0% |
| GCTGAATTGATGTTGGGCCT+AGG | - | chr3_3:52565851-52565870 | Msa0457570:CDS | 50.0% | |
| ! | ACCGATTCCAATCCGTAGCA+CGG | - | chr3_3:52566056-52566075 | Msa0457570:intron | 50.0% |
| !! | TCCGTGCTACGGATTGGAAT+CGG | + | chr3_3:52566060-52566079 | None:intergenic | 50.0% |
| CTTCATAGGTGTCCGTGCTA+CGG | + | chr3_3:52566071-52566090 | None:intergenic | 50.0% | |
| TGACACACACACATCGACGA+TGG | - | chr3_3:52566094-52566113 | Msa0457570:CDS | 50.0% | |
| ! | GCTCCTGCAGTTTGAAATGC+AGG | + | chr3_3:52566592-52566611 | None:intergenic | 50.0% |
| !! | CTTGAGTTGGATGCAGCCTT+AGG | - | chr3_3:52567273-52567292 | Msa0457570:intron | 50.0% |
| TTGAACGCTGCACGATCCTA+AGG | + | chr3_3:52567292-52567311 | None:intergenic | 50.0% | |
| GGTCTCCCTTACATGTGTAC+AGG | + | chr3_3:52567437-52567456 | None:intergenic | 50.0% | |
| AAGGGAGACCATGTTGCATG+TGG | - | chr3_3:52567447-52567466 | Msa0457570:intron | 50.0% | |
| AGGGAGACCATGTTGCATGT+GGG | - | chr3_3:52567448-52567467 | Msa0457570:intron | 50.0% | |
| CTCCGTGATCAACCACGTTA+TGG | - | chr3_3:52567510-52567529 | Msa0457570:intron | 50.0% | |
| AGATCTCACGAGGACTCTGT+AGG | - | chr3_3:52567579-52567598 | Msa0457570:intron | 50.0% | |
| GGATCTAGTGCTCGTCCAAT+AGG | - | chr3_3:52567600-52567619 | Msa0457570:intron | 50.0% | |
| CTAGTGCTCGTCCAATAGGT+AGG | - | chr3_3:52567604-52567623 | Msa0457570:intron | 50.0% | |
| TTAGCTGCCTCCCTACCTAT+TGG | + | chr3_3:52567618-52567637 | None:intergenic | 50.0% | |
| TAGGTGTCCGTGCTACGGAT+TGG | + | chr3_3:52566066-52566085 | None:intergenic | 55.0% | |
| CTGACACTGGCACCAACTGT+TGG | + | chr3_3:52566903-52566922 | None:intergenic | 55.0% | |
| CGAAGGTCTGACTCTGACAC+TGG | + | chr3_3:52566916-52566935 | None:intergenic | 55.0% | |
| TGCTCGTCCAATAGGTAGGG+AGG | - | chr3_3:52567608-52567627 | Msa0457570:intron | 55.0% | |
| AAGCAAGGATGCTGCTGCCT+TGG | - | chr3_3:52567656-52567675 | Msa0457570:intron | 55.0% | |
| TGCCTTGGAGGAGGTGGAAA+AGG | - | chr3_3:52567671-52567690 | Msa0457570:intron | 55.0% | |
| ! | CTCCTTTTCCACCTCCTCCA+AGG | + | chr3_3:52567676-52567695 | None:intergenic | 55.0% |
| TGGAGGAGGTGGAAAAGGAG+TGG | - | chr3_3:52567676-52567695 | Msa0457570:intron | 55.0% | |
| GGAGGAGGTGGAAAAGGAGT+GGG | - | chr3_3:52567677-52567696 | Msa0457570:intron | 55.0% | |
| CCGGTCATCGAGATGCTCTT+CGG | + | chr3_3:52567814-52567833 | None:intergenic | 55.0% | |
| !! | CCGAAGAGCATCTCGATGAC+CGG | - | chr3_3:52567811-52567830 | Msa0457570:five_prime_UTR | 55.0% |
| CACGACAAACACGCCGACAC+CGG | + | chr3_3:52566332-52566351 | None:intergenic | 60.0% | |
| GTCGGCGTGTTTGTCGTGTC+CGG | - | chr3_3:52566334-52566353 | Msa0457570:intron | 60.0% | |
| CAAGGATGCTGCTGCCTTGG+AGG | - | chr3_3:52567659-52567678 | Msa0457570:intron | 60.0% | |
| GGATGCTGCTGCCTTGGAGG+AGG | - | chr3_3:52567662-52567681 | Msa0457570:intron | 65.0% | |
| TGCTGCTGCCTTGGAGGAGG+TGG | - | chr3_3:52567665-52567684 | Msa0457570:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 52565338 | 52567875 | 52565338 | ID=Msa0457570;Name=Msa0457570 |
| chr3_3 | mRNA | 52565338 | 52567875 | 52565338 | ID=Msa0457570-mRNA-1;Parent=Msa0457570;Name=Msa0457570-mRNA-1;_AED=0.63;_eAED=0.63;_QI=219|1|0.8|1|0.75|0.6|5|0|285 |
| chr3_3 | exon | 52565338 | 52565970 | 52565338 | ID=Msa0457570-mRNA-1:exon:10135;Parent=Msa0457570-mRNA-1 |
| chr3_3 | exon | 52566081 | 52566149 | 52566081 | ID=Msa0457570-mRNA-1:exon:10134;Parent=Msa0457570-mRNA-1 |
| chr3_3 | exon | 52566241 | 52566340 | 52566241 | ID=Msa0457570-mRNA-1:exon:10133;Parent=Msa0457570-mRNA-1 |
| chr3_3 | exon | 52566596 | 52566710 | 52566596 | ID=Msa0457570-mRNA-1:exon:10132;Parent=Msa0457570-mRNA-1 |
| chr3_3 | exon | 52567716 | 52567875 | 52567716 | ID=Msa0457570-mRNA-1:exon:10131;Parent=Msa0457570-mRNA-1 |
| chr3_3 | five_prime_UTR | 52567716 | 52567875 | 52567716 | ID=Msa0457570-mRNA-1:five_prime_utr;Parent=Msa0457570-mRNA-1 |
| chr3_3 | five_prime_UTR | 52566652 | 52566710 | 52566652 | ID=Msa0457570-mRNA-1:five_prime_utr;Parent=Msa0457570-mRNA-1 |
| chr3_3 | CDS | 52566596 | 52566651 | 52566596 | ID=Msa0457570-mRNA-1:cds;Parent=Msa0457570-mRNA-1 |
| chr3_3 | CDS | 52566241 | 52566340 | 52566241 | ID=Msa0457570-mRNA-1:cds;Parent=Msa0457570-mRNA-1 |
| chr3_3 | CDS | 52566081 | 52566149 | 52566081 | ID=Msa0457570-mRNA-1:cds;Parent=Msa0457570-mRNA-1 |
| chr3_3 | CDS | 52565338 | 52565970 | 52565338 | ID=Msa0457570-mRNA-1:cds;Parent=Msa0457570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
