Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0921590 | XP_003619829.1 | 95.861 | 604 | 5 | 3 | 1 | 584 | 1 | 604 | 0.0 | 1174 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0921590 | sp|Q5SMQ9|PIN1A_ORYSJ | 71.266 | 616 | 124 | 11 | 1 | 584 | 1 | 595 | 0.0 | 864 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa0921590 | 0.811509 | 6.755323e-51 | -8.615850e-47 |
| Msa0002580 | Msa0921590 | 0.818863 | 1.569856e-52 | -8.615850e-47 |
| Msa0003080 | Msa0921590 | 0.805282 | 1.439343e-49 | -8.615850e-47 |
| Msa0017670 | Msa0921590 | 0.827324 | 1.666001e-54 | -8.615850e-47 |
| Msa0025160 | Msa0921590 | 0.834875 | 2.326803e-56 | -8.615850e-47 |
| Msa0027280 | Msa0921590 | 0.829067 | 6.332638e-55 | -8.615850e-47 |
| Msa0032460 | Msa0921590 | 0.834529 | 2.843577e-56 | -8.615850e-47 |
| Msa0034210 | Msa0921590 | 0.803561 | 3.286756e-49 | -8.615850e-47 |
| Msa0035270 | Msa0921590 | 0.813660 | 2.287928e-51 | -8.615850e-47 |
| Msa0035340 | Msa0921590 | 0.844239 | 8.550608e-59 | -8.615850e-47 |
| Msa0035380 | Msa0921590 | 0.818152 | 2.275735e-52 | -8.615850e-47 |
| Msa0042640 | Msa0921590 | 0.842181 | 3.025099e-58 | -8.615850e-47 |
| Msa0050660 | Msa0921590 | 0.817668 | 2.926719e-52 | -8.615850e-47 |
| Msa0050700 | Msa0921590 | 0.819148 | 1.352557e-52 | -8.615850e-47 |
| Msa0050790 | Msa0921590 | 0.824333 | 8.541925e-54 | -8.615850e-47 |
| Msa0054690 | Msa0921590 | 0.810392 | 1.179583e-50 | -8.615850e-47 |
| Msa0071850 | Msa0921590 | 0.803475 | 3.425142e-49 | -8.615850e-47 |
| Msa0071860 | Msa0921590 | 0.815868 | 7.415944e-52 | -8.615850e-47 |
| Msa0072520 | Msa0921590 | 0.818692 | 1.717052e-52 | -8.615850e-47 |
| Msa0073120 | Msa0921590 | 0.806479 | 8.064253e-50 | -8.615850e-47 |
| Msa0077340 | Msa0921590 | 0.824203 | 9.164566e-54 | -8.615850e-47 |
| Msa0081390 | Msa0921590 | 0.817138 | 3.852783e-52 | -8.615850e-47 |
| Msa0081450 | Msa0921590 | 0.814595 | 1.422035e-51 | -8.615850e-47 |
| Msa0089460 | Msa0921590 | 0.823089 | 1.671289e-53 | -8.615850e-47 |
| Msa0098040 | Msa0921590 | 0.837510 | 4.980643e-57 | -8.615850e-47 |
| Msa0108880 | Msa0921590 | 0.843027 | 1.803318e-58 | -8.615850e-47 |
| Msa0611210 | Msa0921590 | 0.830478 | 2.871052e-55 | -8.615850e-47 |
| Msa0616510 | Msa0921590 | 0.808867 | 2.507786e-50 | -8.615850e-47 |
| Msa0619710 | Msa0921590 | 0.821334 | 4.268081e-53 | -8.615850e-47 |
| Msa0646510 | Msa0921590 | 0.805164 | 1.523219e-49 | -8.615850e-47 |
| Msa0651550 | Msa0921590 | 0.841142 | 5.685479e-58 | -8.615850e-47 |
| Msa0657440 | Msa0921590 | 0.815803 | 7.665949e-52 | -8.615850e-47 |
| Msa0661150 | Msa0921590 | 0.810602 | 1.062111e-50 | -8.615850e-47 |
| Msa0665620 | Msa0921590 | 0.810233 | 1.276048e-50 | -8.615850e-47 |
| Msa0666700 | Msa0921590 | 0.805101 | 1.570269e-49 | -8.615850e-47 |
| Msa0674480 | Msa0921590 | 0.801662 | 8.100501e-49 | -8.615850e-47 |
| Msa0675330 | Msa0921590 | 0.803904 | 2.790303e-49 | -8.615850e-47 |
| Msa0700460 | Msa0921590 | 0.814194 | 1.743929e-51 | -8.615850e-47 |
| Msa0706150 | Msa0921590 | 0.809437 | 1.892972e-50 | -8.615850e-47 |
| Msa0716480 | Msa0921590 | 0.835314 | 1.803835e-56 | -8.615850e-47 |
| Msa0735780 | Msa0921590 | 0.805041 | 1.616287e-49 | -8.615850e-47 |
| Msa0738700 | Msa0921590 | 0.812897 | 3.363931e-51 | -8.615850e-47 |
| Msa0740710 | Msa0921590 | 0.836637 | 8.325649e-57 | -8.615850e-47 |
| Msa0755930 | Msa0921590 | 0.806992 | 6.282307e-50 | -8.615850e-47 |
| Msa0756490 | Msa0921590 | 0.807136 | 5.856463e-50 | -8.615850e-47 |
| Msa0780910 | Msa0921590 | 0.827807 | 1.275649e-54 | -8.615850e-47 |
| Msa0792370 | Msa0921590 | 0.828809 | 7.314493e-55 | -8.615850e-47 |
| Msa0795750 | Msa0921590 | 0.814429 | 1.547495e-51 | -8.615850e-47 |
| Msa0795870 | Msa0921590 | 0.804772 | 1.840194e-49 | -8.615850e-47 |
| Msa0811690 | Msa0921590 | 0.819449 | 1.154989e-52 | -8.615850e-47 |
| Msa0815970 | Msa0921590 | 0.806177 | 9.338188e-50 | -8.615850e-47 |
| Msa0819170 | Msa0921590 | 0.817387 | 3.386476e-52 | -8.615850e-47 |
| Msa0821160 | Msa0921590 | 0.813021 | 3.159446e-51 | -8.615850e-47 |
| Msa0829300 | Msa0921590 | 0.838000 | 3.729559e-57 | -8.615850e-47 |
| Msa0829330 | Msa0921590 | 0.832562 | 8.804575e-56 | -8.615850e-47 |
| Msa0833650 | Msa0921590 | 0.812015 | 5.242192e-51 | -8.615850e-47 |
| Msa0837460 | Msa0921590 | 0.833359 | 5.581556e-56 | -8.615850e-47 |
| Msa0121330 | Msa0921590 | 0.808139 | 3.586806e-50 | -8.615850e-47 |
| Msa0123070 | Msa0921590 | 0.813597 | 2.361064e-51 | -8.615850e-47 |
| Msa0125210 | Msa0921590 | 0.801410 | 9.122060e-49 | -8.615850e-47 |
| Msa0125360 | Msa0921590 | 0.819135 | 1.361698e-52 | -8.615850e-47 |
| Msa0128310 | Msa0921590 | 0.803413 | 3.527322e-49 | -8.615850e-47 |
| Msa0146650 | Msa0921590 | 0.820303 | 7.367295e-53 | -8.615850e-47 |
| Msa0154620 | Msa0921590 | 0.806468 | 8.105923e-50 | -8.615850e-47 |
| Msa0173290 | Msa0921590 | 0.845950 | 2.949848e-59 | -8.615850e-47 |
| Msa0175750 | Msa0921590 | 0.815588 | 8.561300e-52 | -8.615850e-47 |
| Msa0176060 | Msa0921590 | 0.818312 | 2.093746e-52 | -8.615850e-47 |
| Msa0185960 | Msa0921590 | 0.840370 | 9.058263e-58 | -8.615850e-47 |
| Msa0188610 | Msa0921590 | 0.831183 | 1.928180e-55 | -8.615850e-47 |
| Msa0211030 | Msa0921590 | 0.825072 | 5.721894e-54 | -8.615850e-47 |
| Msa0230800 | Msa0921590 | 0.834137 | 3.565494e-56 | -8.615850e-47 |
| Msa0230870 | Msa0921590 | 0.831483 | 1.627012e-55 | -8.615850e-47 |
| Msa0365210 | Msa0921590 | 0.809179 | 2.150729e-50 | -8.615850e-47 |
| Msa0367690 | Msa0921590 | 0.802069 | 6.682861e-49 | -8.615850e-47 |
| Msa0369790 | Msa0921590 | 0.808022 | 3.799082e-50 | -8.615850e-47 |
| Msa0384870 | Msa0921590 | 0.815660 | 8.251166e-52 | -8.615850e-47 |
| Msa0405680 | Msa0921590 | 0.877773 | 4.802850e-69 | -8.615850e-47 |
| Msa0422050 | Msa0921590 | 0.836835 | 7.414919e-57 | -8.615850e-47 |
| Msa0431200 | Msa0921590 | 0.804479 | 2.118236e-49 | -8.615850e-47 |
| Msa0432010 | Msa0921590 | 0.808849 | 2.529978e-50 | -8.615850e-47 |
| Msa0435210 | Msa0921590 | 0.847507 | 1.107192e-59 | -8.615850e-47 |
| Msa0436910 | Msa0921590 | 0.818834 | 1.594123e-52 | -8.615850e-47 |
| Msa0453040 | Msa0921590 | 0.808681 | 2.748824e-50 | -8.615850e-47 |
| Msa0457560 | Msa0921590 | 0.813554 | 2.414003e-51 | -8.615850e-47 |
| Msa0457570 | Msa0921590 | 0.823156 | 1.612223e-53 | -8.615850e-47 |
| Msa0464000 | Msa0921590 | 0.805042 | 1.615942e-49 | -8.615850e-47 |
| Msa0468700 | Msa0921590 | 0.804884 | 1.743278e-49 | -8.615850e-47 |
| Msa0472950 | Msa0921590 | 0.807045 | 6.122887e-50 | -8.615850e-47 |
| Msa0479320 | Msa0921590 | 0.873231 | 1.725310e-67 | -8.615850e-47 |
| Msa0244640 | Msa0921590 | 0.805691 | 1.181055e-49 | -8.615850e-47 |
| Msa0270340 | Msa0921590 | 0.848914 | 4.524579e-60 | -8.615850e-47 |
| Msa0300680 | Msa0921590 | 0.829551 | 4.833346e-55 | -8.615850e-47 |
| Msa0307670 | Msa0921590 | 0.828409 | 9.133699e-55 | -8.615850e-47 |
| Msa0321620 | Msa0921590 | 0.827615 | 1.418699e-54 | -8.615850e-47 |
| Msa0342840 | Msa0921590 | 0.815017 | 1.146771e-51 | -8.615850e-47 |
| Msa0509550 | Msa0921590 | 0.802566 | 5.280173e-49 | -8.615850e-47 |
| Msa0513970 | Msa0921590 | 0.812499 | 4.111489e-51 | -8.615850e-47 |
| Msa0514580 | Msa0921590 | 0.801554 | 8.522845e-49 | -8.615850e-47 |
| Msa0520260 | Msa0921590 | 0.810639 | 1.043070e-50 | -8.615850e-47 |
| Msa0520870 | Msa0921590 | 0.810358 | 1.199378e-50 | -8.615850e-47 |
| Msa0528570 | Msa0921590 | 0.823847 | 1.111097e-53 | -8.615850e-47 |
| Msa0529030 | Msa0921590 | 0.847879 | 8.747706e-60 | -8.615850e-47 |
| Msa0530780 | Msa0921590 | 0.848590 | 5.564774e-60 | -8.615850e-47 |
| Msa0543660 | Msa0921590 | 0.803694 | 3.084405e-49 | -8.615850e-47 |
| Msa0549370 | Msa0921590 | 0.832286 | 1.030861e-55 | -8.615850e-47 |
| Msa0550050 | Msa0921590 | 0.821094 | 4.845455e-53 | -8.615850e-47 |
| Msa0557460 | Msa0921590 | 0.807282 | 5.453553e-50 | -8.615850e-47 |
| Msa0567170 | Msa0921590 | 0.804989 | 1.657832e-49 | -8.615850e-47 |
| Msa0570010 | Msa0921590 | 0.809026 | 2.318424e-50 | -8.615850e-47 |
| Msa0574050 | Msa0921590 | 0.839347 | 1.673507e-57 | -8.615850e-47 |
| Msa0580370 | Msa0921590 | 0.815626 | 8.394610e-52 | -8.615850e-47 |
| Msa0584420 | Msa0921590 | 0.807589 | 4.695721e-50 | -8.615850e-47 |
| Msa0585020 | Msa0921590 | 0.801159 | 1.026720e-48 | -8.615850e-47 |
| Msa0587620 | Msa0921590 | 0.811279 | 7.579617e-51 | -8.615850e-47 |
| Msa0588920 | Msa0921590 | 0.809715 | 1.650277e-50 | -8.615850e-47 |
| Msa0591170 | Msa0921590 | 0.803904 | 2.789875e-49 | -8.615850e-47 |
| Msa0597270 | Msa0921590 | 0.812077 | 5.082347e-51 | -8.615850e-47 |
| Msa0851850 | Msa0921590 | 0.804649 | 1.951816e-49 | -8.615850e-47 |
| Msa0859290 | Msa0921590 | 0.819329 | 1.229956e-52 | -8.615850e-47 |
| Msa0894790 | Msa0921590 | 0.922500 | 9.065579e-89 | -8.615850e-47 |
| Msa0921590 | Msa0960260 | 0.895668 | 7.699906e-76 | -8.615850e-47 |
| Msa0921590 | Msa0994720 | 0.918053 | 2.503911e-86 | -8.615850e-47 |
| Msa0921590 | Msa1002640 | 0.811182 | 7.957070e-51 | -8.615850e-47 |
| Msa0921590 | Msa1021590 | 0.814102 | 1.827309e-51 | -8.615850e-47 |
| Msa0921590 | Msa1025560 | 0.827378 | 1.617456e-54 | -8.615850e-47 |
| Msa0921590 | Msa1034600 | 0.810704 | 1.009904e-50 | -8.615850e-47 |
| Msa0921590 | Msa1040150 | 0.843396 | 1.437998e-58 | -8.615850e-47 |
| Msa0921590 | Msa1042160 | 0.816431 | 5.548653e-52 | -8.615850e-47 |
| Msa0921590 | Msa1042190 | 0.818532 | 1.865917e-52 | -8.615850e-47 |
| Msa0921590 | Msa1044680 | 0.812805 | 3.523934e-51 | -8.615850e-47 |
| Msa0921590 | Msa1064370 | 0.842784 | 2.092422e-58 | -8.615850e-47 |
| Msa0921590 | Msa1074370 | 0.802905 | 4.492788e-49 | -8.615850e-47 |
| Msa0921590 | Msa1078820 | 0.834145 | 3.549874e-56 | -8.615850e-47 |
| Msa0921590 | Msa1078880 | 0.803990 | 2.677962e-49 | -8.615850e-47 |
| Msa0921590 | Msa1078970 | 0.809217 | 2.110710e-50 | -8.615850e-47 |
| Msa0921590 | Msa1081690 | 0.800364 | 1.492070e-48 | -8.615850e-47 |
| Msa0921590 | Msa1090140 | 0.802298 | 5.994184e-49 | -8.615850e-47 |
| Msa0921590 | Msa1105640 | 0.839993 | 1.135934e-57 | -8.615850e-47 |
| Msa0921590 | Msa1116660 | 0.811795 | 5.856343e-51 | -8.615850e-47 |
| Msa0921590 | Msa1123970 | 0.838825 | 2.284173e-57 | -8.615850e-47 |
| Msa0921590 | Msa1125990 | 0.803863 | 2.845484e-49 | -8.615850e-47 |
| Msa0921590 | Msa1128130 | 0.856447 | 3.197440e-62 | -8.615850e-47 |
| Msa0921590 | Msa1132840 | 0.812532 | 4.042889e-51 | -8.615850e-47 |
| Msa0921590 | Msa1148960 | 0.809827 | 1.560586e-50 | -8.615850e-47 |
| Msa0921590 | Msa1167470 | 0.820100 | 8.199723e-53 | -8.615850e-47 |
| Msa0921590 | Msa1169190 | 0.800905 | 1.157120e-48 | -8.615850e-47 |
| Msa0921590 | Msa1169650 | 0.836873 | 7.250902e-57 | -8.615850e-47 |
| Msa0921590 | Msa1194240 | 0.802104 | 6.572066e-49 | -8.615850e-47 |
| Msa0921590 | Msa1216110 | 0.801991 | 6.933667e-49 | -8.615850e-47 |
| Msa0921590 | Msa1226520 | 0.800314 | 1.527306e-48 | -8.615850e-47 |
| Msa0921590 | Msa1240770 | 0.803345 | 3.643636e-49 | -8.615850e-47 |
| Msa0921590 | Msa1265650 | 0.821236 | 4.494648e-53 | -8.615850e-47 |
| Msa0921590 | Msa1303560 | 0.811494 | 6.806778e-51 | -8.615850e-47 |
| Msa0921590 | Msa1303650 | 0.816961 | 4.220857e-52 | -8.615850e-47 |
| Msa0921590 | Msa1308820 | 0.801832 | 7.475074e-49 | -8.615850e-47 |
| Msa0921590 | Msa1341890 | 0.811227 | 7.781113e-51 | -8.615850e-47 |
| Msa0921590 | Msa1343180 | 0.827521 | 1.494338e-54 | -8.615850e-47 |
| Msa0921590 | Msa1349690 | 0.830279 | 3.211498e-55 | -8.615850e-47 |
| Msa0921590 | Msa1358290 | 0.843206 | 1.615572e-58 | -8.615850e-47 |
| Msa0921590 | Msa1359690 | 0.808738 | 2.672877e-50 | -8.615850e-47 |
| Msa0921590 | Msa1368750 | 0.805493 | 1.299880e-49 | -8.615850e-47 |
| Msa0921590 | Msa1372040 | 0.836453 | 9.276307e-57 | -8.615850e-47 |
| Msa0921590 | Msa1374790 | 0.807264 | 5.502599e-50 | -8.615850e-47 |
| Msa0921590 | Msa1380120 | 0.803223 | 3.861875e-49 | -8.615850e-47 |
| Msa0921590 | Msa1383310 | 0.800727 | 1.258424e-48 | -8.615850e-47 |
| Msa0921590 | Msa1384460 | 0.841299 | 5.168031e-58 | -8.615850e-47 |
| Msa0921590 | Msa1392740 | 0.828515 | 8.612509e-55 | -8.615850e-47 |
| Msa0921590 | Msa1396240 | 0.804725 | 1.881590e-49 | -8.615850e-47 |
| Msa0921590 | Msa1405460 | 0.843045 | 1.783231e-58 | -8.615850e-47 |
| Msa0921590 | Msa1407840 | 0.800455 | 1.429897e-48 | -8.615850e-47 |
| Msa0921590 | Msa1409410 | 0.852031 | 6.026919e-61 | -8.615850e-47 |
| Msa0921590 | Msa1414170 | 0.800958 | 1.128846e-48 | -8.615850e-47 |
| Msa0921590 | Msa1415540 | 0.821173 | 4.647560e-53 | -8.615850e-47 |
| Msa0921590 | Msa1417370 | 0.810336 | 1.212799e-50 | -8.615850e-47 |
| Msa0921590 | Msa1417380 | 0.807618 | 4.628012e-50 | -8.615850e-47 |
| Msa0921590 | Msa1433790 | 0.801364 | 9.324533e-49 | -8.615850e-47 |
| Msa0921590 | Msa1437810 | 0.800037 | 1.739373e-48 | -8.615850e-47 |
| Msa0921590 | Msa1437930 | 0.800742 | 1.249798e-48 | -8.615850e-47 |
| Msa0921590 | Msa1440630 | 0.823994 | 1.026200e-53 | -8.615850e-47 |
| Msa0921590 | Msa1445910 | -0.800451 | 1.432434e-48 | -8.615850e-47 |
| Msa0921590 | Msa1451820 | 0.808029 | 3.784856e-50 | -8.615850e-47 |
| Msa0921590 | Msa1452140 | 0.803926 | 2.761030e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0921590 | MtrunA17_Chr6g0478431 | 95.861 | 604 | 5 | 3 | 1 | 584 | 1 | 604 | 0.0 | 1174 |
| Msa0921590 | MtrunA17_Chr7g0255941 | 68.006 | 622 | 130 | 12 | 1 | 584 | 1 | 591 | 0.0 | 804 |
| Msa0921590 | MtrunA17_Chr4g0044181 | 61.333 | 675 | 154 | 13 | 1 | 584 | 1 | 659 | 0.0 | 766 |
| Msa0921590 | MtrunA17_Chr8g0393111 | 69.085 | 579 | 92 | 11 | 1 | 554 | 1 | 517 | 0.0 | 748 |
| Msa0921590 | MtrunA17_Chr1g0160461 | 63.422 | 637 | 164 | 12 | 1 | 584 | 1 | 621 | 0.0 | 744 |
| Msa0921590 | MtrunA17_Chr4g0071571 | 59.843 | 635 | 194 | 11 | 1 | 584 | 1 | 625 | 0.0 | 714 |
| Msa0921590 | MtrunA17_Chr1g0159341 | 50.423 | 591 | 222 | 11 | 1 | 584 | 1 | 527 | 1.21e-176 | 510 |
| Msa0921590 | MtrunA17_Chr2g0298971 | 40.333 | 600 | 238 | 16 | 1 | 563 | 1 | 517 | 2.50e-131 | 394 |
| Msa0921590 | MtrunA17_Chr4g0071551 | 71.831 | 213 | 59 | 1 | 1 | 212 | 1 | 213 | 1.93e-109 | 326 |
| Msa0921590 | MtrunA17_Chr4g0071561 | 48.295 | 352 | 126 | 8 | 228 | 560 | 2 | 316 | 1.56e-90 | 282 |
| Msa0921590 | MtrunA17_Chr7g0216571 | 56.915 | 188 | 70 | 2 | 397 | 584 | 191 | 367 | 1.94e-62 | 210 |
| Msa0921590 | MtrunA17_Chr7g0216571 | 57.407 | 162 | 69 | 0 | 1 | 162 | 12 | 173 | 1.33e-55 | 192 |
| Msa0921590 | MtrunA17_Chr6g0452821 | 53.804 | 184 | 77 | 1 | 401 | 584 | 185 | 360 | 2.70e-61 | 207 |
| Msa0921590 | MtrunA17_Chr6g0452821 | 57.595 | 158 | 66 | 1 | 1 | 157 | 1 | 158 | 3.68e-54 | 187 |
| Msa0921590 | MtrunA17_Chr7g0249141 | 42.857 | 210 | 111 | 2 | 373 | 582 | 159 | 359 | 3.13e-52 | 182 |
| Msa0921590 | MtrunA17_Chr7g0249141 | 52.903 | 155 | 73 | 0 | 1 | 155 | 1 | 155 | 3.72e-49 | 174 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0921590 | AT1G73590.1 | 71.090 | 633 | 123 | 11 | 1 | 584 | 1 | 622 | 0.0 | 860 |
| Msa0921590 | AT2G01420.1 | 61.551 | 632 | 175 | 13 | 1 | 584 | 1 | 612 | 0.0 | 738 |
| Msa0921590 | AT2G01420.2 | 61.478 | 636 | 173 | 13 | 1 | 584 | 1 | 616 | 0.0 | 735 |
| Msa0921590 | AT1G23080.3 | 63.477 | 627 | 174 | 11 | 1 | 584 | 1 | 615 | 0.0 | 732 |
| Msa0921590 | AT1G23080.4 | 63.477 | 627 | 174 | 11 | 1 | 584 | 1 | 615 | 0.0 | 732 |
| Msa0921590 | AT1G70940.1 | 61.621 | 654 | 167 | 14 | 1 | 584 | 1 | 640 | 0.0 | 731 |
| Msa0921590 | AT1G23080.1 | 63.233 | 631 | 173 | 12 | 1 | 584 | 1 | 619 | 0.0 | 730 |
| Msa0921590 | AT5G57090.1 | 58.488 | 648 | 204 | 10 | 1 | 584 | 1 | 647 | 0.0 | 711 |
| Msa0921590 | AT1G23080.2 | 60.227 | 528 | 155 | 12 | 1 | 485 | 1 | 516 | 0.0 | 578 |
| Msa0921590 | AT2G01420.3 | 57.914 | 537 | 154 | 13 | 1 | 485 | 1 | 517 | 0.0 | 568 |
| Msa0921590 | AT5G57090.2 | 55.759 | 547 | 177 | 10 | 102 | 584 | 2 | 547 | 0.0 | 551 |
| Msa0921590 | AT1G77110.1 | 49.336 | 602 | 255 | 12 | 1 | 584 | 1 | 570 | 0.0 | 532 |
| Msa0921590 | AT1G77110.2 | 48.966 | 580 | 246 | 12 | 1 | 562 | 1 | 548 | 1.88e-172 | 500 |
| Msa0921590 | AT5G15100.1 | 62.195 | 164 | 62 | 0 | 421 | 584 | 204 | 367 | 2.00e-62 | 210 |
| Msa0921590 | AT5G15100.1 | 49.091 | 165 | 79 | 1 | 1 | 160 | 1 | 165 | 3.00e-44 | 161 |
| Msa0921590 | AT5G16530.2 | 54.777 | 157 | 71 | 0 | 1 | 157 | 1 | 157 | 4.88e-53 | 184 |
| Msa0921590 | AT5G16530.2 | 49.635 | 137 | 69 | 0 | 427 | 563 | 192 | 328 | 1.47e-41 | 153 |
| Msa0921590 | AT5G16530.1 | 54.777 | 157 | 71 | 0 | 1 | 157 | 1 | 157 | 1.23e-52 | 184 |
| Msa0921590 | AT5G16530.1 | 52.000 | 150 | 72 | 0 | 430 | 579 | 195 | 344 | 1.63e-49 | 175 |
Find 122 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCATAAACTCTAATTTAAT+TGG | 0.118206 | 6_2:-59013870 | None:intergenic |
| ATGGGAATTCCTTTACTTAA+AGG | 0.161203 | 6_2:+59009047 | Msa0921590:CDS |
| TCTTGTGTACTACATCTTAA+TGG | 0.199474 | 6_2:+59013492 | Msa0921590:CDS |
| GACTAGGCTTATATTGATTA+TGG | 0.205854 | 6_2:+59010469 | Msa0921590:CDS |
| AACACTTACTCTAGCTTAAT+TGG | 0.219273 | 6_2:+59010518 | Msa0921590:CDS |
| TCTTATTTCTTCTTGCTATA+TGG | 0.220059 | 6_2:+59008946 | Msa0921590:CDS |
| CTTGGTCTTTGGTTTCATTC+AGG | 0.226095 | 6_2:+59010546 | Msa0921590:CDS |
| AATTGGTCTCACTTGGTCTT+TGG | 0.247229 | 6_2:+59010535 | Msa0921590:CDS |
| CTTCCAAACACTTTGGTTAT+GGG | 0.260587 | 6_2:+59009029 | Msa0921590:CDS |
| ACTTCCAAACACTTTGGTTA+TGG | 0.265129 | 6_2:+59009028 | Msa0921590:CDS |
| AGACACTCAAGAAGACTATT+TGG | 0.279261 | 6_2:+59010331 | Msa0921590:CDS |
| CTTTCATGTTGCCGTTGTTC+AGG | 0.296518 | 6_2:+59012221 | Msa0921590:CDS |
| GTAGCTATGATCTTAGCTTA+TGG | 0.302571 | 6_2:+59008756 | Msa0921590:CDS |
| CTTGTGTACTACATCTTAAT+GGG | 0.304181 | 6_2:+59013493 | Msa0921590:CDS |
| CACCCTGTGCTTAGAATATC+AGG | 0.308657 | 6_2:-59013329 | None:intergenic |
| CCATTCTAAACAACCCCTTT+TGG | 0.316887 | 6_2:-59008979 | None:intergenic |
| AATGATGTTGTTAATAACTA+TGG | 0.326058 | 6_2:+59009524 | Msa0921590:CDS |
| TTTGTAGGAGAAAACATTCC+TGG | 0.335718 | 6_2:-59009647 | None:intergenic |
| AAGATCTTCATATGTTTGTT+TGG | 0.346836 | 6_2:+59009747 | Msa0921590:CDS |
| ATTAAGCTAGAGTAAGTGTT+TGG | 0.363628 | 6_2:-59010515 | None:intergenic |
| TAGCTTATGGATCAGTAAAA+TGG | 0.367227 | 6_2:+59008769 | Msa0921590:CDS |
| CCAAAAGGGGTTGTTTAGAA+TGG | 0.369590 | 6_2:+59008979 | Msa0921590:CDS |
| GGAAATAGACTTTGCTATAA+TGG | 0.370605 | 6_2:-59011002 | None:intergenic |
| GGCTTATATTGATTATGGTT+TGG | 0.374310 | 6_2:+59010474 | Msa0921590:CDS |
| ATTCCCATAACCAAAGTGTT+TGG | 0.375667 | 6_2:-59009032 | None:intergenic |
| CCTTTACTTAAAGGAATGTA+TGG | 0.377284 | 6_2:+59009056 | Msa0921590:CDS |
| TCTTCATAGTTAGAAGGTCT+TGG | 0.378956 | 6_2:-59009575 | None:intergenic |
| GAGAAAGATGAATTCAGCTT+TGG | 0.386961 | 6_2:+59010353 | Msa0921590:CDS |
| TCAGCATTAGTAAGATTAGA+AGG | 0.389801 | 6_2:-59009392 | None:intergenic |
| GCTTCTTCTTCATAGTTAGA+AGG | 0.394539 | 6_2:-59009581 | None:intergenic |
| AAGTCCTGCATCTGACAGTA+TGG | 0.396661 | 6_2:-59011023 | None:intergenic |
| GGAGAAAACATTCCTGGATT+AGG | 0.399766 | 6_2:-59009641 | None:intergenic |
| TTGTTCTTCAATGTATCATT+TGG | 0.400452 | 6_2:+59009111 | Msa0921590:CDS |
| TCACCTGTCTCTGATGTGTT+TGG | 0.400913 | 6_2:+59009782 | Msa0921590:CDS |
| GCAGCTGCTTCATTTGCTGT+TGG | 0.404122 | 6_2:+59012183 | Msa0921590:CDS |
| TAAAATTCACGTGTGGTGAT+TGG | 0.409089 | 6_2:+59013555 | Msa0921590:three_prime_UTR |
| ATGTAGTACACAAGAGTAAT+GGG | 0.415483 | 6_2:-59013484 | None:intergenic |
| TATTCCTTAGCAAAGACAAA+TGG | 0.416542 | 6_2:-59013296 | None:intergenic |
| ATGGAGCAATTTCTCCAAAA+GGG | 0.423793 | 6_2:+59008965 | Msa0921590:CDS |
| CTAGCTTAATTGGTCTCACT+TGG | 0.425011 | 6_2:+59010528 | Msa0921590:CDS |
| AGCCTAGTCATCACACTTGC+TGG | 0.427352 | 6_2:-59010455 | None:intergenic |
| ATCCTTACAAAATGAACCTT+AGG | 0.436200 | 6_2:+59008889 | Msa0921590:CDS |
| CCTTGTTGGTCCAGCTGTCA+TGG | 0.441793 | 6_2:+59012161 | Msa0921590:CDS |
| TCATTTGCTGTTGGACTCAA+AGG | 0.446394 | 6_2:+59012192 | Msa0921590:CDS |
| GAACAGTTTCCTGACACTGC+TGG | 0.447998 | 6_2:+59009188 | Msa0921590:CDS |
| GCATAAACTCTAATTTAATT+GGG | 0.448227 | 6_2:-59013869 | None:intergenic |
| AAGCATCACGAGAATTGAAT+AGG | 0.448777 | 6_2:+59013669 | Msa0921590:three_prime_UTR |
| CCATACATTCCTTTAAGTAA+AGG | 0.457088 | 6_2:-59009056 | None:intergenic |
| GATTGTTTGATGCTATGAAA+TGG | 0.458601 | 6_2:-59008869 | None:intergenic |
| TGCAATGACTTGGTTGGTTG+AGG | 0.463743 | 6_2:+59013587 | Msa0921590:three_prime_UTR |
| GAATTCAGCTTTGGTAATAG+AGG | 0.466027 | 6_2:+59010362 | Msa0921590:CDS |
| ATGGGTGTGAGATTCCTTGT+TGG | 0.466818 | 6_2:+59012147 | Msa0921590:CDS |
| CTCAACACTTCCAAACACTT+TGG | 0.468618 | 6_2:+59009022 | Msa0921590:CDS |
| TATGGAGCAATTTCTCCAAA+AGG | 0.468730 | 6_2:+59008964 | Msa0921590:CDS |
| TGATTCTGATGTCATGTCAT+TGG | 0.471853 | 6_2:+59009232 | Msa0921590:CDS |
| CCTGTCTCTGATGTGTTTGG+TGG | 0.474026 | 6_2:+59009785 | Msa0921590:CDS |
| TTGATTCCTGAACATTGATC+AGG | 0.476336 | 6_2:-59008807 | None:intergenic |
| AACTAGAGCCTCTAGGTGTA+GGG | 0.478121 | 6_2:-59009442 | None:intergenic |
| GAAGCAGCTGCCATGACAGC+TGG | 0.484986 | 6_2:-59012171 | None:intergenic |
| GGTGGAAGAAACTCAAACTT+TGG | 0.486326 | 6_2:+59009497 | Msa0921590:CDS |
| AAACTAGAGCCTCTAGGTGT+AGG | 0.486546 | 6_2:-59009443 | None:intergenic |
| ATTCCTTAGCAAAGACAAAT+GGG | 0.487126 | 6_2:-59013295 | None:intergenic |
| CAACATGAAGGTGGTGAGAA+AGG | 0.488878 | 6_2:+59010404 | Msa0921590:CDS |
| AACTATCCTGCACCTAATCC+AGG | 0.489266 | 6_2:+59009629 | Msa0921590:CDS |
| ACAATGGAACCAGCAGTGTC+AGG | 0.491234 | 6_2:-59009197 | None:intergenic |
| TATATCTTTGTTCCTTGATG+AGG | 0.493213 | 6_2:-59013833 | None:intergenic |
| ATACTGTCAGATGCAGGACT+TGG | 0.497015 | 6_2:+59011025 | Msa0921590:CDS |
| TGTCCCATTTGTCTTTGCTA+AGG | 0.502481 | 6_2:+59013292 | Msa0921590:CDS |
| GGCATGGCTATGTTCAGTCT+TGG | 0.502767 | 6_2:+59011046 | Msa0921590:CDS |
| GATGTAGTACACAAGAGTAA+TGG | 0.503834 | 6_2:-59013485 | None:intergenic |
| TTGTTAAATGCGCCTCATCA+AGG | 0.504126 | 6_2:+59013821 | Msa0921590:three_prime_UTR |
| AACATTCCTGGATTAGGTGC+AGG | 0.504642 | 6_2:-59009635 | None:intergenic |
| GCCACACACAAAAGAGAGAA+AGG | 0.506037 | 6_2:+59013622 | Msa0921590:three_prime_UTR |
| CATCCTGATATTCTAAGCAC+AGG | 0.506231 | 6_2:+59013326 | Msa0921590:CDS |
| GAATGAATGAAATGAAATGA+TGG | 0.513467 | 6_2:+59013521 | Msa0921590:exon |
| AAGATCATAGCTACATAAAG+TGG | 0.519198 | 6_2:-59008747 | None:intergenic |
| GATGCTGAAATCAAAGAAGA+TGG | 0.521178 | 6_2:+59009278 | Msa0921590:CDS |
| TTAGTAAGATTAGAAGGTCT+AGG | 0.522435 | 6_2:-59009386 | None:intergenic |
| ATAGACTTTGCTATAATGGC+AGG | 0.526481 | 6_2:-59010998 | None:intergenic |
| ATCAACATGGATTGAAACAA+TGG | 0.535163 | 6_2:-59009213 | None:intergenic |
| GTGTTTGGTGGACATGACTT+TGG | 0.541105 | 6_2:+59009797 | Msa0921590:CDS |
| CACCAGCAAGTGTGATGACT+AGG | 0.542846 | 6_2:+59010453 | Msa0921590:CDS |
| ATTTCCATACTGTCAGATGC+AGG | 0.544656 | 6_2:+59011019 | Msa0921590:CDS |
| TTGGTAATAGAGGGATGGAA+AGG | 0.548727 | 6_2:+59010372 | Msa0921590:CDS |
| ATTGGATGGTAGAACACCAT+TGG | 0.552263 | 6_2:+59009250 | Msa0921590:CDS |
| ATTTCAGCATCAGTTTCCAA+TGG | 0.555165 | 6_2:-59009266 | None:intergenic |
| GCATATTCCATGCAATGACT+TGG | 0.556473 | 6_2:+59013577 | Msa0921590:three_prime_UTR |
| CAGCAAAGAGTGCAACAAAA+CGG | 0.557146 | 6_2:-59008830 | None:intergenic |
| TGGTAATAGAGGGATGGAAA+GGG | 0.562703 | 6_2:+59010373 | Msa0921590:CDS |
| GGTGGTGAGAAAGGTGGAGA+TGG | 0.565305 | 6_2:+59010413 | Msa0921590:CDS |
| AATTCAGCTTTGGTAATAGA+GGG | 0.567372 | 6_2:+59010363 | Msa0921590:CDS |
| CAACCAACCAAGTCATTGCA+TGG | 0.570606 | 6_2:-59013584 | None:intergenic |
| GTTAATGCTAAGAAGAGTAA+TGG | 0.571263 | 6_2:+59009704 | Msa0921590:CDS |
| GGTTTATCTGCTAATTCAAG+AGG | 0.575033 | 6_2:+59009545 | Msa0921590:CDS |
| CCACCAAACACATCAGAGAC+AGG | 0.575955 | 6_2:-59009785 | None:intergenic |
| TGATTAAAACTAGAGCCTCT+AGG | 0.580637 | 6_2:-59009449 | None:intergenic |
| CAGCTTTGGTAATAGAGGGA+TGG | 0.582859 | 6_2:+59010367 | Msa0921590:CDS |
| CTTATGGATCAGTAAAATGG+TGG | 0.591247 | 6_2:+59008772 | Msa0921590:CDS |
| TGGAGCAATTTCTCCAAAAG+GGG | 0.592702 | 6_2:+59008966 | Msa0921590:CDS |
| CATCACGAGAATTGAATAGG+AGG | 0.593519 | 6_2:+59013672 | Msa0921590:three_prime_UTR |
| TAAACTCTAATTTAATTGGG+AGG | 0.602021 | 6_2:-59013866 | None:intergenic |
| CATGAAGGTGGTGAGAAAGG+TGG | 0.607207 | 6_2:+59010407 | Msa0921590:CDS |
| ATGAAATGGAATGAAAGAAG+TGG | 0.614917 | 6_2:-59008855 | None:intergenic |
| ATTCCATGCAATGACTTGGT+TGG | 0.619272 | 6_2:+59013581 | Msa0921590:three_prime_UTR |
| GTCAGATGCAGGACTTGGCA+TGG | 0.620374 | 6_2:+59011030 | Msa0921590:CDS |
| TGTTTGAGTTTAGAGGAGCA+AGG | 0.624922 | 6_2:+59009153 | Msa0921590:CDS |
| CAACAGGCAGCTCTTCCACA+AGG | 0.629681 | 6_2:+59013266 | Msa0921590:intron |
| AGGGAAATGAATCAACATGA+AGG | 0.630340 | 6_2:+59010392 | Msa0921590:CDS |
| CCATGACAGCTGGACCAACA+AGG | 0.634447 | 6_2:-59012161 | None:intergenic |
| TCTGATGTCATGTCATTGGA+TGG | 0.636707 | 6_2:+59009236 | Msa0921590:CDS |
| CTAGTCATCACACTTGCTGG+TGG | 0.639719 | 6_2:-59010452 | None:intergenic |
| TCAAGAAACCCTACACCTAG+AGG | 0.654815 | 6_2:+59009434 | Msa0921590:CDS |
| AAGAAACAGGACCTGAACAA+CGG | 0.657192 | 6_2:-59012232 | None:intergenic |
| GAAATGAATCAACATGAAGG+TGG | 0.659006 | 6_2:+59010395 | Msa0921590:CDS |
| CTACCATGTCATGACAGCAA+TGG | 0.661376 | 6_2:+59008722 | Msa0921590:CDS |
| GATTTCATAAAATTCACGTG+TGG | 0.661936 | 6_2:+59013548 | Msa0921590:three_prime_UTR |
| ACATGACATCAGAATCAACA+TGG | 0.668465 | 6_2:-59009226 | None:intergenic |
| ACAAATGGGACAATTCCTTG+TGG | 0.669772 | 6_2:-59013281 | None:intergenic |
| GCACCATTGCTGTCATGACA+TGG | 0.674152 | 6_2:-59008725 | None:intergenic |
| ATCCTGATATTCTAAGCACA+GGG | 0.676564 | 6_2:+59013327 | Msa0921590:CDS |
| TTGTGTACTACATCTTAATG+GGG | 0.695067 | 6_2:+59013494 | Msa0921590:CDS |
| ATTTACTCAAGAAGATCACA+AGG | 0.697954 | 6_2:+59009347 | Msa0921590:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAGCATTTTATTAAAAAATA+TGG | - | chr6_2:59010832-59010851 | None:intergenic | 10.0% |
| !!! | GTTATCATAAAATTTAAAAT+AGG | - | chr6_2:59011908-59011927 | None:intergenic | 10.0% |
| !! | ATTAAAAGTGAATAAAAAAA+AGG | - | chr6_2:59012335-59012354 | None:intergenic | 10.0% |
| !! | AATAAATAAATAAATTTCAG+TGG | + | chr6_2:59012435-59012454 | Msa0921590:intron | 10.0% |
| !! | CTTCATATAAATATATATTT+GGG | - | chr6_2:59012772-59012791 | None:intergenic | 10.0% |
| !! | TCTTCATATAAATATATATT+TGG | - | chr6_2:59012773-59012792 | None:intergenic | 10.0% |
| !! | TCTTAAAAACTATAATATTA+TGG | + | chr6_2:59012982-59013001 | Msa0921590:intron | 10.0% |
| !!! | AATTACCATTAAAATTTTAT+AGG | + | chr6_2:59013013-59013032 | Msa0921590:intron | 10.0% |
| !!! | ATTACCATTAAAATTTTATA+GGG | + | chr6_2:59013014-59013033 | Msa0921590:intron | 10.0% |
| !!! | AAAAATTATTTTCATATGCA+AGG | - | chr6_2:59010152-59010171 | None:intergenic | 15.0% |
| !! | ATGTAAAAAATCAAACTTTA+AGG | - | chr6_2:59010252-59010271 | None:intergenic | 15.0% |
| !! | AAAATGCTAAATTTGATATT+TGG | + | chr6_2:59010843-59010862 | Msa0921590:intron | 15.0% |
| !! | AACAATTATCAAAATTAGAA+AGG | - | chr6_2:59011233-59011252 | None:intergenic | 15.0% |
| !!! | CAAAAATCATATTTGATAAT+TGG | + | chr6_2:59011625-59011644 | Msa0921590:intron | 15.0% |
| !!! | CTTTTTTAAATATGAATTGT+TGG | - | chr6_2:59012537-59012556 | None:intergenic | 15.0% |
| !! | TCAATTAGTTATTTAAAAAG+TGG | + | chr6_2:59012563-59012582 | Msa0921590:intron | 15.0% |
| !!! | TCCTTATTTACATTTTTATA+GGG | + | chr6_2:59012899-59012918 | Msa0921590:intron | 15.0% |
| !! | AATTGAAGTAAAATAATGAA+GGG | - | chr6_2:59013387-59013406 | None:intergenic | 15.0% |
| !! | AAATTGAAGTAAAATAATGA+AGG | - | chr6_2:59013388-59013407 | None:intergenic | 15.0% |
| !! | GAAAAAGTAAAATAAATTCT+TGG | - | chr6_2:59013701-59013720 | None:intergenic | 15.0% |
| !! | TGATAGTTCATTAAAAAAAA+AGG | - | chr6_2:59013743-59013762 | None:intergenic | 15.0% |
| !!! | TACTGATTTTTATTCTATGA+TGG | + | chr6_2:59009472-59009491 | Msa0921590:CDS | 20.0% |
| !!! | ACTGATTTTTATTCTATGAT+GGG | + | chr6_2:59009473-59009492 | Msa0921590:CDS | 20.0% |
| !! | AATGATGTTGTTAATAACTA+TGG | + | chr6_2:59009524-59009543 | Msa0921590:CDS | 20.0% |
| !!! | TTTTTACTACCATTATTTGT+AGG | - | chr6_2:59009665-59009684 | None:intergenic | 20.0% |
| !! | AATAATGGTAGTAAAAATCT+TGG | + | chr6_2:59009668-59009687 | Msa0921590:CDS | 20.0% |
| !!! | TGTTTTAGTATAAGTACTTA+TGG | + | chr6_2:59009938-59009957 | Msa0921590:intron | 20.0% |
| !!! | TGTTAGTTTGATTTTTATGT+TGG | + | chr6_2:59010271-59010290 | Msa0921590:intron | 20.0% |
| !!! | GAAATTTTACATATGTAATG+TGG | - | chr6_2:59010604-59010623 | None:intergenic | 20.0% |
| !!! | AAATTAGCTTTAAAAGATCT+TGG | + | chr6_2:59010709-59010728 | Msa0921590:intron | 20.0% |
| !! | CAAACTATAATCAATCAAAA+TGG | - | chr6_2:59010942-59010961 | None:intergenic | 20.0% |
| !!! | CATTTTGATTGATTATAGTT+TGG | + | chr6_2:59010940-59010959 | Msa0921590:intron | 20.0% |
| !!! | AATCTTTTTTCACTCTTTTA+AGG | + | chr6_2:59011388-59011407 | Msa0921590:intron | 20.0% |
| !! | TCAAATTTCAACATATTTAG+AGG | - | chr6_2:59011464-59011483 | None:intergenic | 20.0% |
| !!! | TTGTATTGGTTATGTTAAAA+GGG | - | chr6_2:59012280-59012299 | None:intergenic | 20.0% |
| !!! | ATTGTATTGGTTATGTTAAA+AGG | - | chr6_2:59012281-59012300 | None:intergenic | 20.0% |
| !! | AACAATAAACTAACTTATCT+TGG | - | chr6_2:59012402-59012421 | None:intergenic | 20.0% |
| !! | AATAAATAAATTTCAGTGGT+TGG | + | chr6_2:59012439-59012458 | Msa0921590:intron | 20.0% |
| !! | AATTTGACTCTATAATCTAA+GGG | - | chr6_2:59012635-59012654 | None:intergenic | 20.0% |
| !!! | TAGAAACTTGTAATTTTGTA+GGG | - | chr6_2:59012844-59012863 | None:intergenic | 20.0% |
| !!! | TTAGAAACTTGTAATTTTGT+AGG | - | chr6_2:59012845-59012864 | None:intergenic | 20.0% |
| !!! | GTCCTTATTTACATTTTTAT+AGG | + | chr6_2:59012898-59012917 | Msa0921590:intron | 20.0% |
| !! | TCCCTATAAAAATGTAAATA+AGG | - | chr6_2:59012903-59012922 | None:intergenic | 20.0% |
| !!! | CATTTTTATAGGGATTATTT+TGG | + | chr6_2:59012909-59012928 | Msa0921590:intron | 20.0% |
| !!! | GAAAACTTTTTACCAAAAAT+TGG | - | chr6_2:59012948-59012967 | None:intergenic | 20.0% |
| !!! | GGTAAAAAGTTTTCAAAATA+AGG | + | chr6_2:59012954-59012973 | Msa0921590:intron | 20.0% |
| !!! | TTAGCCCTATAAAATTTTAA+TGG | - | chr6_2:59013021-59013040 | None:intergenic | 20.0% |
| !! | CCGATAATGAAAATAATTAA+GGG | - | chr6_2:59013084-59013103 | None:intergenic | 20.0% |
| !!! | CCCTTAATTATTTTCATTAT+CGG | + | chr6_2:59013081-59013100 | Msa0921590:intron | 20.0% |
| !! | ACCGATAATGAAAATAATTA+AGG | - | chr6_2:59013085-59013104 | None:intergenic | 20.0% |
| !! | GGAACAAAGATATATAAAAA+TGG | + | chr6_2:59013842-59013861 | Msa0921590:three_prime_UTR | 20.0% |
| !! | GCATAAACTCTAATTTAATT+GGG | - | chr6_2:59013872-59013891 | None:intergenic | 20.0% |
| !! | AGCATAAACTCTAATTTAAT+TGG | - | chr6_2:59013873-59013892 | None:intergenic | 20.0% |
| !! | TCTTATTTCTTCTTGCTATA+TGG | + | chr6_2:59008946-59008965 | Msa0921590:CDS | 25.0% |
| !!! | TGAATTTTCAGGTAGTTTAA+TGG | + | chr6_2:59009079-59009098 | Msa0921590:CDS | 25.0% |
| ! | TTGTTCTTCAATGTATCATT+TGG | + | chr6_2:59009111-59009130 | Msa0921590:CDS | 25.0% |
| !! | ATGTTTTCTCCTACAAATAA+TGG | + | chr6_2:59009653-59009672 | Msa0921590:CDS | 25.0% |
| ! | AAGATCTTCATATGTTTGTT+TGG | + | chr6_2:59009747-59009766 | Msa0921590:CDS | 25.0% |
| ! | ATAAGTAGTTTAACCAAACA+AGG | - | chr6_2:59009913-59009932 | None:intergenic | 25.0% |
| ! | CATAGACTGAAAATAGTTTA+TGG | + | chr6_2:59010125-59010144 | Msa0921590:intron | 25.0% |
| !!! | CATTTTGTTTGATGAATTAG+TGG | + | chr6_2:59010298-59010317 | Msa0921590:intron | 25.0% |
| ! | TGGAATCAATATGAAGAATT+TGG | - | chr6_2:59010922-59010941 | None:intergenic | 25.0% |
| ! | ATATTTAGAGGAGTTAAGAT+GGG | - | chr6_2:59011452-59011471 | None:intergenic | 25.0% |
| !! | CTAATACGTCTTTTGTTAAT+CGG | - | chr6_2:59011851-59011870 | None:intergenic | 25.0% |
| !!! | AAAAAAGGAGAGGAATTTTT+TGG | - | chr6_2:59012320-59012339 | None:intergenic | 25.0% |
| ! | AAGTGAATAAAAAAAAGGAG+AGG | - | chr6_2:59012330-59012349 | None:intergenic | 25.0% |
| ! | GTACAAAAATATATGCACTA+TGG | + | chr6_2:59012471-59012490 | Msa0921590:intron | 25.0% |
| ! | TCTTTGCAAATAACATTCTT+TGG | + | chr6_2:59012496-59012515 | Msa0921590:intron | 25.0% |
| ! | GAATTTGACTCTATAATCTA+AGG | - | chr6_2:59012636-59012655 | None:intergenic | 25.0% |
| !!! | TTTTATAGGGATTATTTTGG+AGG | + | chr6_2:59012912-59012931 | Msa0921590:intron | 25.0% |
| ! | ATATTTGTACAACAAACAGT+TGG | + | chr6_2:59013187-59013206 | Msa0921590:intron | 25.0% |
| ! | ACAAACAAACATGTTAAATG+TGG | - | chr6_2:59013215-59013234 | None:intergenic | 25.0% |
| !! | TTCATTGGTTAGCATTAAAA+GGG | - | chr6_2:59013414-59013433 | None:intergenic | 25.0% |
| !! | TTTCATTGGTTAGCATTAAA+AGG | - | chr6_2:59013415-59013434 | None:intergenic | 25.0% |
| !! | CTAACCAATGAAACTAATTT+TGG | + | chr6_2:59013422-59013441 | Msa0921590:intron | 25.0% |
| ! | GAATGAATGAAATGAAATGA+TGG | + | chr6_2:59013521-59013540 | Msa0921590:exon | 25.0% |
| ! | TAAACTCTAATTTAATTGGG+AGG | - | chr6_2:59013869-59013888 | None:intergenic | 25.0% |
| AAGATCATAGCTACATAAAG+TGG | - | chr6_2:59008750-59008769 | None:intergenic | 30.0% | |
| TAGCTTATGGATCAGTAAAA+TGG | + | chr6_2:59008769-59008788 | Msa0921590:CDS | 30.0% | |
| ATGAAATGGAATGAAAGAAG+TGG | - | chr6_2:59008858-59008877 | None:intergenic | 30.0% | |
| GATTGTTTGATGCTATGAAA+TGG | - | chr6_2:59008872-59008891 | None:intergenic | 30.0% | |
| ATCCTTACAAAATGAACCTT+AGG | + | chr6_2:59008889-59008908 | Msa0921590:CDS | 30.0% | |
| ! | AACCTAAGGTTCATTTTGTA+AGG | - | chr6_2:59008894-59008913 | None:intergenic | 30.0% |
| ATGGGAATTCCTTTACTTAA+AGG | + | chr6_2:59009047-59009066 | Msa0921590:CDS | 30.0% | |
| CCATACATTCCTTTAAGTAA+AGG | - | chr6_2:59009059-59009078 | None:intergenic | 30.0% | |
| CCTTTACTTAAAGGAATGTA+TGG | + | chr6_2:59009056-59009075 | Msa0921590:CDS | 30.0% | |
| !! | CTTTTCATGTTTGAGTTTAG+AGG | + | chr6_2:59009146-59009165 | Msa0921590:CDS | 30.0% |
| ! | ATCAACATGGATTGAAACAA+TGG | - | chr6_2:59009216-59009235 | None:intergenic | 30.0% |
| ATTTACTCAAGAAGATCACA+AGG | + | chr6_2:59009347-59009366 | Msa0921590:CDS | 30.0% | |
| TTAGTAAGATTAGAAGGTCT+AGG | - | chr6_2:59009389-59009408 | None:intergenic | 30.0% | |
| TCAGCATTAGTAAGATTAGA+AGG | - | chr6_2:59009395-59009414 | None:intergenic | 30.0% | |
| !! | GATTTTTATTCTATGATGGG+TGG | + | chr6_2:59009476-59009495 | Msa0921590:CDS | 30.0% |
| GTTAATGCTAAGAAGAGTAA+TGG | + | chr6_2:59009704-59009723 | Msa0921590:CDS | 30.0% | |
| GACTGAAAATAGTCTATGAA+AGG | - | chr6_2:59010089-59010108 | None:intergenic | 30.0% | |
| AGTTTAAACAAGCGAATTCT+AGG | + | chr6_2:59010223-59010242 | Msa0921590:intron | 30.0% | |
| TTTGTTTGATGAATTAGTGG+AGG | + | chr6_2:59010301-59010320 | Msa0921590:intron | 30.0% | |
| TTGTTTGATGAATTAGTGGA+GGG | + | chr6_2:59010302-59010321 | Msa0921590:intron | 30.0% | |
| ! | AATTCAGCTTTGGTAATAGA+GGG | + | chr6_2:59010363-59010382 | Msa0921590:CDS | 30.0% |
| ! | GACTAGGCTTATATTGATTA+TGG | + | chr6_2:59010469-59010488 | Msa0921590:CDS | 30.0% |
| ! | GGCTTATATTGATTATGGTT+TGG | + | chr6_2:59010474-59010493 | Msa0921590:CDS | 30.0% |
| ATTAAGCTAGAGTAAGTGTT+TGG | - | chr6_2:59010518-59010537 | None:intergenic | 30.0% | |
| ! | AACACTTACTCTAGCTTAAT+TGG | + | chr6_2:59010518-59010537 | Msa0921590:CDS | 30.0% |
| ! | GGAAATAGACTTTGCTATAA+TGG | - | chr6_2:59011005-59011024 | None:intergenic | 30.0% |
| !!! | GCTCTATCTTTTACTTTTTC+AGG | - | chr6_2:59011188-59011207 | None:intergenic | 30.0% |
| CATATTTAGAGGAGTTAAGA+TGG | - | chr6_2:59011453-59011472 | None:intergenic | 30.0% | |
| ! | TAATGTGTCATTCATTAGTC+AGG | - | chr6_2:59011787-59011806 | None:intergenic | 30.0% |
| GATTGACTGAAGATATATAG+TGG | + | chr6_2:59012007-59012026 | Msa0921590:intron | 30.0% | |
| TAGTGGTGATACTAATTGAT+TGG | + | chr6_2:59012024-59012043 | Msa0921590:intron | 30.0% | |
| ! | TTTCCACATGCTATGATTTT+TGG | - | chr6_2:59012108-59012127 | None:intergenic | 30.0% |
| GCATGCAATGAATATTGTAT+TGG | - | chr6_2:59012294-59012313 | None:intergenic | 30.0% | |
| AAGTTCAAATTCATTGGTGT+CGG | - | chr6_2:59012609-59012628 | None:intergenic | 30.0% | |
| ! | TCATAATGTTTTCAGTTGAG+TGG | - | chr6_2:59012662-59012681 | None:intergenic | 30.0% |
| !!! | GGACTAAAAGTACCAATTTT+TGG | + | chr6_2:59012933-59012952 | Msa0921590:intron | 30.0% |
| ! | CTTGAAAACTCATGATTTGT+AGG | + | chr6_2:59013042-59013061 | Msa0921590:intron | 30.0% |
| ! | TTGGTAATTAGATGCCAAAT+TGG | - | chr6_2:59013242-59013261 | None:intergenic | 30.0% |
| TCTAATTACCAAAAACCAAC+AGG | + | chr6_2:59013250-59013269 | Msa0921590:intron | 30.0% | |
| ATTCCTTAGCAAAGACAAAT+GGG | - | chr6_2:59013298-59013317 | None:intergenic | 30.0% | |
| TATTCCTTAGCAAAGACAAA+TGG | - | chr6_2:59013299-59013318 | None:intergenic | 30.0% | |
| GAAGTAAAATAATGAAGGGT+AGG | - | chr6_2:59013383-59013402 | None:intergenic | 30.0% | |
| ! | CTCACCAAAATTAGTTTCAT+TGG | - | chr6_2:59013429-59013448 | None:intergenic | 30.0% |
| ATGTAGTACACAAGAGTAAT+GGG | - | chr6_2:59013487-59013506 | None:intergenic | 30.0% | |
| TCTTGTGTACTACATCTTAA+TGG | + | chr6_2:59013492-59013511 | Msa0921590:CDS | 30.0% | |
| CTTGTGTACTACATCTTAAT+GGG | + | chr6_2:59013493-59013512 | Msa0921590:CDS | 30.0% | |
| TTGTGTACTACATCTTAATG+GGG | + | chr6_2:59013494-59013513 | Msa0921590:CDS | 30.0% | |
| GATTTCATAAAATTCACGTG+TGG | + | chr6_2:59013548-59013567 | Msa0921590:three_prime_UTR | 30.0% | |
| CAAAAGAGAGAAAGGAAAAA+AGG | + | chr6_2:59013630-59013649 | Msa0921590:three_prime_UTR | 30.0% | |
| !! | GAAAGGAAAAAAGGTGTTAA+AGG | + | chr6_2:59013639-59013658 | Msa0921590:three_prime_UTR | 30.0% |
| TATATCTTTGTTCCTTGATG+AGG | - | chr6_2:59013836-59013855 | None:intergenic | 30.0% | |
| GTAGCTATGATCTTAGCTTA+TGG | + | chr6_2:59008756-59008775 | Msa0921590:CDS | 35.0% | |
| CTTATGGATCAGTAAAATGG+TGG | + | chr6_2:59008772-59008791 | Msa0921590:CDS | 35.0% | |
| ! | TTTTCACCTGATCAATGTTC+AGG | + | chr6_2:59008801-59008820 | Msa0921590:CDS | 35.0% |
| TTGATTCCTGAACATTGATC+AGG | - | chr6_2:59008810-59008829 | None:intergenic | 35.0% | |
| TATCAGCTGCTAAAAACCTA+AGG | - | chr6_2:59008908-59008927 | None:intergenic | 35.0% | |
| TATGGAGCAATTTCTCCAAA+AGG | + | chr6_2:59008964-59008983 | Msa0921590:CDS | 35.0% | |
| ATGGAGCAATTTCTCCAAAA+GGG | + | chr6_2:59008965-59008984 | Msa0921590:CDS | 35.0% | |
| ACTTCCAAACACTTTGGTTA+TGG | + | chr6_2:59009028-59009047 | Msa0921590:CDS | 35.0% | |
| CTTCCAAACACTTTGGTTAT+GGG | + | chr6_2:59009029-59009048 | Msa0921590:CDS | 35.0% | |
| ! | ATTCCCATAACCAAAGTGTT+TGG | - | chr6_2:59009035-59009054 | None:intergenic | 35.0% |
| ! | GGAATGTATGGTGAATTTTC+AGG | + | chr6_2:59009068-59009087 | Msa0921590:CDS | 35.0% |
| ACATGACATCAGAATCAACA+TGG | - | chr6_2:59009229-59009248 | None:intergenic | 35.0% | |
| TGATTCTGATGTCATGTCAT+TGG | + | chr6_2:59009232-59009251 | Msa0921590:CDS | 35.0% | |
| ATTTCAGCATCAGTTTCCAA+TGG | - | chr6_2:59009269-59009288 | None:intergenic | 35.0% | |
| GATGCTGAAATCAAAGAAGA+TGG | + | chr6_2:59009278-59009297 | Msa0921590:CDS | 35.0% | |
| TGATTAAAACTAGAGCCTCT+AGG | - | chr6_2:59009452-59009471 | None:intergenic | 35.0% | |
| !!! | TTTTATTCTATGATGGGTGG+TGG | + | chr6_2:59009479-59009498 | Msa0921590:CDS | 35.0% |
| GGTTTATCTGCTAATTCAAG+AGG | + | chr6_2:59009545-59009564 | Msa0921590:CDS | 35.0% | |
| TCTTCATAGTTAGAAGGTCT+TGG | - | chr6_2:59009578-59009597 | None:intergenic | 35.0% | |
| GCTTCTTCTTCATAGTTAGA+AGG | - | chr6_2:59009584-59009603 | None:intergenic | 35.0% | |
| TTTGTAGGAGAAAACATTCC+TGG | - | chr6_2:59009650-59009669 | None:intergenic | 35.0% | |
| GTTAAATTGAATGTGTCTCC+TGG | + | chr6_2:59009839-59009858 | Msa0921590:intron | 35.0% | |
| ! | AGAAATAACCAACCTTTTCC+AGG | - | chr6_2:59009860-59009879 | None:intergenic | 35.0% |
| AACAAGGTCTAAGAAGGTAA+AGG | - | chr6_2:59009897-59009916 | None:intergenic | 35.0% | |
| TTACCTTCTTAGACCTTGTT+TGG | + | chr6_2:59009897-59009916 | Msa0921590:intron | 35.0% | |
| TAACCAAACAAGGTCTAAGA+AGG | - | chr6_2:59009903-59009922 | None:intergenic | 35.0% | |
| TTAAACAAGCGAATTCTAGG+AGG | + | chr6_2:59010226-59010245 | Msa0921590:intron | 35.0% | |
| AGACACTCAAGAAGACTATT+TGG | + | chr6_2:59010331-59010350 | Msa0921590:CDS | 35.0% | |
| GAGAAAGATGAATTCAGCTT+TGG | + | chr6_2:59010353-59010372 | Msa0921590:CDS | 35.0% | |
| ! | GAATTCAGCTTTGGTAATAG+AGG | + | chr6_2:59010362-59010381 | Msa0921590:CDS | 35.0% |
| AGGGAAATGAATCAACATGA+AGG | + | chr6_2:59010392-59010411 | Msa0921590:CDS | 35.0% | |
| GAAATGAATCAACATGAAGG+TGG | + | chr6_2:59010395-59010414 | Msa0921590:CDS | 35.0% | |
| TTTACTTGGTCAGGTGATTA+GGG | - | chr6_2:59010639-59010658 | None:intergenic | 35.0% | |
| AACGACCAAAATCGTTTACT+TGG | - | chr6_2:59010653-59010672 | None:intergenic | 35.0% | |
| TCGTTCATATCTGATCAGAT+GGG | + | chr6_2:59010732-59010751 | Msa0921590:intron | 35.0% | |
| ATGAATGCTCACAATTGATG+CGG | - | chr6_2:59010768-59010787 | None:intergenic | 35.0% | |
| ! | TTCATATAGTTTGCGCATTG+CGG | + | chr6_2:59010783-59010802 | Msa0921590:intron | 35.0% |
| ! | TGGTTTGTGTTGTATATTGC+AGG | + | chr6_2:59010960-59010979 | Msa0921590:intron | 35.0% |
| ! | ATAGACTTTGCTATAATGGC+AGG | - | chr6_2:59011001-59011020 | None:intergenic | 35.0% |
| TGTCATTCATTAGTCAGGTT+CGG | - | chr6_2:59011782-59011801 | None:intergenic | 35.0% | |
| !!! | TGTTTTGACAGGTTTGTTCA+TGG | + | chr6_2:59012074-59012093 | Msa0921590:intron | 35.0% |
| CAACCAAAAATCATAGCATG+TGG | + | chr6_2:59012102-59012121 | Msa0921590:CDS | 35.0% | |
| !! | TTCCATTGCAGCTTTTTCTA+TGG | + | chr6_2:59012128-59012147 | Msa0921590:CDS | 35.0% |
| !! | TCCATTGCAGCTTTTTCTAT+GGG | + | chr6_2:59012129-59012148 | Msa0921590:CDS | 35.0% |
| AGAAGACAGAGAAAAGAAAC+AGG | - | chr6_2:59012248-59012267 | None:intergenic | 35.0% | |
| !!! | AAGGAGAGGAATTTTTTGGA+GGG | - | chr6_2:59012316-59012335 | None:intergenic | 35.0% |
| !!! | AAAGGAGAGGAATTTTTTGG+AGG | - | chr6_2:59012317-59012336 | None:intergenic | 35.0% |
| TTTCAGTGGTTGGAATTTCT+TGG | + | chr6_2:59012449-59012468 | Msa0921590:intron | 35.0% | |
| GGGTTGAAGTTCAAATTCAT+TGG | - | chr6_2:59012615-59012634 | None:intergenic | 35.0% | |
| GTTTGTTTGTCTGTCCAATT+TGG | + | chr6_2:59013225-59013244 | Msa0921590:intron | 35.0% | |
| ATCCTGATATTCTAAGCACA+GGG | + | chr6_2:59013327-59013346 | Msa0921590:CDS | 35.0% | |
| !!! | TGAGAATGCAGTGTCATTTT+TGG | + | chr6_2:59013445-59013464 | Msa0921590:intron | 35.0% |
| !!! | GAGAATGCAGTGTCATTTTT+GGG | + | chr6_2:59013446-59013465 | Msa0921590:intron | 35.0% |
| GATGTAGTACACAAGAGTAA+TGG | - | chr6_2:59013488-59013507 | None:intergenic | 35.0% | |
| TAAAATTCACGTGTGGTGAT+TGG | + | chr6_2:59013555-59013574 | Msa0921590:three_prime_UTR | 35.0% | |
| AAGCATCACGAGAATTGAAT+AGG | + | chr6_2:59013669-59013688 | Msa0921590:three_prime_UTR | 35.0% | |
| ! | CAGCAAAGAGTGCAACAAAA+CGG | - | chr6_2:59008833-59008852 | None:intergenic | 40.0% |
| TGGAGCAATTTCTCCAAAAG+GGG | + | chr6_2:59008966-59008985 | Msa0921590:CDS | 40.0% | |
| ! | CCATTCTAAACAACCCCTTT+TGG | - | chr6_2:59008982-59009001 | None:intergenic | 40.0% |
| CCAAAAGGGGTTGTTTAGAA+TGG | + | chr6_2:59008979-59008998 | Msa0921590:CDS | 40.0% | |
| CTCAACACTTCCAAACACTT+TGG | + | chr6_2:59009022-59009041 | Msa0921590:CDS | 40.0% | |
| ! | TGTTTGAGTTTAGAGGAGCA+AGG | + | chr6_2:59009153-59009172 | Msa0921590:CDS | 40.0% |
| TCTGATGTCATGTCATTGGA+TGG | + | chr6_2:59009236-59009255 | Msa0921590:CDS | 40.0% | |
| ATTGGATGGTAGAACACCAT+TGG | + | chr6_2:59009250-59009269 | Msa0921590:CDS | 40.0% | |
| GGTGGAAGAAACTCAAACTT+TGG | + | chr6_2:59009497-59009516 | Msa0921590:CDS | 40.0% | |
| GGAGAAAACATTCCTGGATT+AGG | - | chr6_2:59009644-59009663 | None:intergenic | 40.0% | |
| TTGAATGTGTCTCCTGGAAA+AGG | + | chr6_2:59009845-59009864 | Msa0921590:intron | 40.0% | |
| ! | TTGGTAATAGAGGGATGGAA+AGG | + | chr6_2:59010372-59010391 | Msa0921590:CDS | 40.0% |
| TGGTAATAGAGGGATGGAAA+GGG | + | chr6_2:59010373-59010392 | Msa0921590:CDS | 40.0% | |
| ! | CTAGCTTAATTGGTCTCACT+TGG | + | chr6_2:59010528-59010547 | Msa0921590:CDS | 40.0% |
| ! | AATTGGTCTCACTTGGTCTT+TGG | + | chr6_2:59010535-59010554 | Msa0921590:CDS | 40.0% |
| ! | CTTGGTCTTTGGTTTCATTC+AGG | + | chr6_2:59010546-59010565 | Msa0921590:CDS | 40.0% |
| GTTTACTTGGTCAGGTGATT+AGG | - | chr6_2:59010640-59010659 | None:intergenic | 40.0% | |
| CCAAAATCGTTTACTTGGTC+AGG | - | chr6_2:59010648-59010667 | None:intergenic | 40.0% | |
| ! | CCTGACCAAGTAAACGATTT+TGG | + | chr6_2:59010645-59010664 | Msa0921590:intron | 40.0% |
| GTCGTTCATATCTGATCAGA+TGG | + | chr6_2:59010731-59010750 | Msa0921590:intron | 40.0% | |
| ATTTCCATACTGTCAGATGC+AGG | + | chr6_2:59011019-59011038 | Msa0921590:CDS | 40.0% | |
| TCAAAACAAGCATGCCAAAG+AGG | - | chr6_2:59012062-59012081 | None:intergenic | 40.0% | |
| !!! | TTTGGCATGCTTGTTTTGAC+AGG | + | chr6_2:59012063-59012082 | Msa0921590:intron | 40.0% |
| ACCCATAGAAAAAGCTGCAA+TGG | - | chr6_2:59012133-59012152 | None:intergenic | 40.0% | |
| !! | TCATTTGCTGTTGGACTCAA+AGG | + | chr6_2:59012192-59012211 | Msa0921590:CDS | 40.0% |
| AAGAAACAGGACCTGAACAA+CGG | - | chr6_2:59012235-59012254 | None:intergenic | 40.0% | |
| ACAAATGGGACAATTCCTTG+TGG | - | chr6_2:59013284-59013303 | None:intergenic | 40.0% | |
| TGTCCCATTTGTCTTTGCTA+AGG | + | chr6_2:59013292-59013311 | Msa0921590:CDS | 40.0% | |
| CATCCTGATATTCTAAGCAC+AGG | + | chr6_2:59013326-59013345 | Msa0921590:CDS | 40.0% | |
| GCATATTCCATGCAATGACT+TGG | + | chr6_2:59013577-59013596 | Msa0921590:three_prime_UTR | 40.0% | |
| !! | ATTCCATGCAATGACTTGGT+TGG | + | chr6_2:59013581-59013600 | Msa0921590:three_prime_UTR | 40.0% |
| ! | TCCTTTCTCTCTTTTGTGTG+TGG | - | chr6_2:59013626-59013645 | None:intergenic | 40.0% |
| CATCACGAGAATTGAATAGG+AGG | + | chr6_2:59013672-59013691 | Msa0921590:three_prime_UTR | 40.0% | |
| TTGTTAAATGCGCCTCATCA+AGG | + | chr6_2:59013821-59013840 | Msa0921590:three_prime_UTR | 40.0% | |
| CTACCATGTCATGACAGCAA+TGG | + | chr6_2:59008722-59008741 | Msa0921590:CDS | 45.0% | |
| TCAAGAAACCCTACACCTAG+AGG | + | chr6_2:59009434-59009453 | Msa0921590:CDS | 45.0% | |
| AACTAGAGCCTCTAGGTGTA+GGG | - | chr6_2:59009445-59009464 | None:intergenic | 45.0% | |
| AAACTAGAGCCTCTAGGTGT+AGG | - | chr6_2:59009446-59009465 | None:intergenic | 45.0% | |
| AACTATCCTGCACCTAATCC+AGG | + | chr6_2:59009629-59009648 | Msa0921590:CDS | 45.0% | |
| ! | AACATTCCTGGATTAGGTGC+AGG | - | chr6_2:59009638-59009657 | None:intergenic | 45.0% |
| TCACCTGTCTCTGATGTGTT+TGG | + | chr6_2:59009782-59009801 | Msa0921590:CDS | 45.0% | |
| ! | GTGTTTGGTGGACATGACTT+TGG | + | chr6_2:59009797-59009816 | Msa0921590:CDS | 45.0% |
| ATGTGTCTCCTGGAAAAGGT+TGG | + | chr6_2:59009849-59009868 | Msa0921590:intron | 45.0% | |
| ! | CAGCTTTGGTAATAGAGGGA+TGG | + | chr6_2:59010367-59010386 | Msa0921590:CDS | 45.0% |
| CAACATGAAGGTGGTGAGAA+AGG | + | chr6_2:59010404-59010423 | Msa0921590:CDS | 45.0% | |
| AAGTCCTGCATCTGACAGTA+TGG | - | chr6_2:59011026-59011045 | None:intergenic | 45.0% | |
| ATACTGTCAGATGCAGGACT+TGG | + | chr6_2:59011025-59011044 | Msa0921590:CDS | 45.0% | |
| CAAAGCAAGCAAGCAAGCAA+AGG | + | chr6_2:59011283-59011302 | Msa0921590:intron | 45.0% | |
| ACCTCATCACATCACAAGCT+TGG | - | chr6_2:59011937-59011956 | None:intergenic | 45.0% | |
| ATGTGATGAGGTGTGGTTAG+TGG | + | chr6_2:59011945-59011964 | Msa0921590:intron | 45.0% | |
| AAACAAGCATGCCAAAGAGG+AGG | - | chr6_2:59012059-59012078 | None:intergenic | 45.0% | |
| ATGGGTGTGAGATTCCTTGT+TGG | + | chr6_2:59012147-59012166 | Msa0921590:CDS | 45.0% | |
| CTTTCATGTTGCCGTTGTTC+AGG | + | chr6_2:59012221-59012240 | Msa0921590:CDS | 45.0% | |
| !!! | AAGAGCTGCCTGTTGGTTTT+TGG | - | chr6_2:59013261-59013280 | None:intergenic | 45.0% |
| CACCCTGTGCTTAGAATATC+AGG | - | chr6_2:59013332-59013351 | None:intergenic | 45.0% | |
| CAACCAACCAAGTCATTGCA+TGG | - | chr6_2:59013587-59013606 | None:intergenic | 45.0% | |
| !! | TGCAATGACTTGGTTGGTTG+AGG | + | chr6_2:59013587-59013606 | Msa0921590:three_prime_UTR | 45.0% |
| GCCACACACAAAAGAGAGAA+AGG | + | chr6_2:59013622-59013641 | Msa0921590:three_prime_UTR | 45.0% | |
| !!! | TTTTAAATTAACTTTTATTA+TGG | + | chr6_2:59011657-59011676 | Msa0921590:intron | 5.0% |
| !! | TTTGTATAATAATTAATTAT+TGG | + | chr6_2:59012800-59012819 | Msa0921590:intron | 5.0% |
| !! | TTGTATAATAATTAATTATT+GGG | + | chr6_2:59012801-59012820 | Msa0921590:intron | 5.0% |
| GCACCATTGCTGTCATGACA+TGG | - | chr6_2:59008728-59008747 | None:intergenic | 50.0% | |
| GAACAGTTTCCTGACACTGC+TGG | + | chr6_2:59009188-59009207 | Msa0921590:CDS | 50.0% | |
| ACAATGGAACCAGCAGTGTC+AGG | - | chr6_2:59009200-59009219 | None:intergenic | 50.0% | |
| CCACCAAACACATCAGAGAC+AGG | - | chr6_2:59009788-59009807 | None:intergenic | 50.0% | |
| CCTGTCTCTGATGTGTTTGG+TGG | + | chr6_2:59009785-59009804 | Msa0921590:CDS | 50.0% | |
| CATGAAGGTGGTGAGAAAGG+TGG | + | chr6_2:59010407-59010426 | Msa0921590:CDS | 50.0% | |
| ! | CTAGTCATCACACTTGCTGG+TGG | - | chr6_2:59010455-59010474 | None:intergenic | 50.0% |
| CACCAGCAAGTGTGATGACT+AGG | + | chr6_2:59010453-59010472 | Msa0921590:CDS | 50.0% | |
| AGCCTAGTCATCACACTTGC+TGG | - | chr6_2:59010458-59010477 | None:intergenic | 50.0% | |
| GGCATGGCTATGTTCAGTCT+TGG | + | chr6_2:59011046-59011065 | Msa0921590:CDS | 50.0% | |
| AGCAAGCAAGCAAGCAAAGG+TGG | + | chr6_2:59011286-59011305 | Msa0921590:intron | 50.0% | |
| GCCAAGCTTGTGATGTGATG+AGG | + | chr6_2:59011933-59011952 | Msa0921590:intron | 50.0% | |
| GCTTGTGATGTGATGAGGTG+TGG | + | chr6_2:59011938-59011957 | Msa0921590:intron | 50.0% | |
| TGATGAGGTGTGGTTAGTGG+TGG | + | chr6_2:59011948-59011967 | Msa0921590:intron | 50.0% | |
| !! | GCAGCTGCTTCATTTGCTGT+TGG | + | chr6_2:59012183-59012202 | Msa0921590:CDS | 50.0% |
| GGTGGTGAGAAAGGTGGAGA+TGG | + | chr6_2:59010413-59010432 | Msa0921590:CDS | 55.0% | |
| CGTGCAATCGTTGACGACAG+AGG | + | chr6_2:59010894-59010913 | Msa0921590:intron | 55.0% | |
| GTCAGATGCAGGACTTGGCA+TGG | + | chr6_2:59011030-59011049 | Msa0921590:CDS | 55.0% | |
| GCAAGCAAGCAAAGGTGGAG+TGG | + | chr6_2:59011291-59011310 | Msa0921590:intron | 55.0% | |
| GGCATGCTTTGCCTCCTCTT+TGG | + | chr6_2:59012045-59012064 | Msa0921590:intron | 55.0% | |
| CCATGACAGCTGGACCAACA+AGG | - | chr6_2:59012164-59012183 | None:intergenic | 55.0% | |
| CCTTGTTGGTCCAGCTGTCA+TGG | + | chr6_2:59012161-59012180 | Msa0921590:CDS | 55.0% | |
| CTTGTGGAAGAGCTGCCTGT+TGG | - | chr6_2:59013268-59013287 | None:intergenic | 55.0% | |
| CAACAGGCAGCTCTTCCACA+AGG | + | chr6_2:59013266-59013285 | Msa0921590:intron | 55.0% | |
| GAAGCAGCTGCCATGACAGC+TGG | - | chr6_2:59012174-59012193 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 59008702 | 59013894 | 59008702 | ID=Msa0921590;Name=Msa0921590 |
| chr6_2 | mRNA | 59008702 | 59013894 | 59008702 | ID=Msa0921590-mRNA-1;Parent=Msa0921590;Name=Msa0921590-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0.8|0.83|1|0.8|0.83|6|372|584 |
| chr6_2 | exon | 59008702 | 59009818 | 59008702 | ID=Msa0921590-mRNA-1:exon:8874;Parent=Msa0921590-mRNA-1 |
| chr6_2 | exon | 59010318 | 59010567 | 59010318 | ID=Msa0921590-mRNA-1:exon:8875;Parent=Msa0921590-mRNA-1 |
| chr6_2 | exon | 59010982 | 59011067 | 59010982 | ID=Msa0921590-mRNA-1:exon:8876;Parent=Msa0921590-mRNA-1 |
| chr6_2 | exon | 59012085 | 59012242 | 59012085 | ID=Msa0921590-mRNA-1:exon:8877;Parent=Msa0921590-mRNA-1 |
| chr6_2 | exon | 59013272 | 59013348 | 59013272 | ID=Msa0921590-mRNA-1:exon:8878;Parent=Msa0921590-mRNA-1 |
| chr6_2 | exon | 59013456 | 59013894 | 59013456 | ID=Msa0921590-mRNA-1:exon:8879;Parent=Msa0921590-mRNA-1 |
| chr6_2 | CDS | 59008702 | 59009818 | 59008702 | ID=Msa0921590-mRNA-1:cds;Parent=Msa0921590-mRNA-1 |
| chr6_2 | CDS | 59010318 | 59010567 | 59010318 | ID=Msa0921590-mRNA-1:cds;Parent=Msa0921590-mRNA-1 |
| chr6_2 | CDS | 59010982 | 59011067 | 59010982 | ID=Msa0921590-mRNA-1:cds;Parent=Msa0921590-mRNA-1 |
| chr6_2 | CDS | 59012085 | 59012242 | 59012085 | ID=Msa0921590-mRNA-1:cds;Parent=Msa0921590-mRNA-1 |
| chr6_2 | CDS | 59013272 | 59013348 | 59013272 | ID=Msa0921590-mRNA-1:cds;Parent=Msa0921590-mRNA-1 |
| chr6_2 | CDS | 59013456 | 59013522 | 59013456 | ID=Msa0921590-mRNA-1:cds;Parent=Msa0921590-mRNA-1 |
| chr6_2 | three_prime_UTR | 59013523 | 59013894 | 59013523 | ID=Msa0921590-mRNA-1:three_prime_utr;Parent=Msa0921590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
