Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1417380 | sp|O81643|VILI1_ARATH | 54.496 | 912 | 394 | 5 | 1 | 894 | 1 | 909 | 0.0 | 1027 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1417380 | A0A072UYP6 | 97.092 | 894 | 16 | 1 | 1 | 894 | 1 | 884 | 0.0 | 1791 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa1417380 | 0.822059 | 2.900472e-53 | -8.615850e-47 |
| Msa0005380 | Msa1417380 | 0.822483 | 2.313063e-53 | -8.615850e-47 |
| Msa0017670 | Msa1417380 | 0.811314 | 7.447730e-51 | -8.615850e-47 |
| Msa0030700 | Msa1417380 | 0.807332 | 5.322739e-50 | -8.615850e-47 |
| Msa0042640 | Msa1417380 | 0.846381 | 2.250877e-59 | -8.615850e-47 |
| Msa0077340 | Msa1417380 | 0.809195 | 2.133792e-50 | -8.615850e-47 |
| Msa0081020 | Msa1417380 | 0.808919 | 2.444353e-50 | -8.615850e-47 |
| Msa0098040 | Msa1417380 | 0.831315 | 1.789501e-55 | -8.615850e-47 |
| Msa1348170 | Msa1417380 | -0.803957 | 2.719736e-49 | -8.615850e-47 |
| Msa1356600 | Msa1417380 | -0.842294 | 2.822642e-58 | -8.615850e-47 |
| Msa1372040 | Msa1417380 | 0.830191 | 3.375098e-55 | -8.615850e-47 |
| Msa1390440 | Msa1417380 | 0.822490 | 2.303196e-53 | -8.615850e-47 |
| Msa1405460 | Msa1417380 | 0.806729 | 7.139769e-50 | -8.615850e-47 |
| Msa1407840 | Msa1417380 | 0.815332 | 9.761935e-52 | -8.615850e-47 |
| Msa1415540 | Msa1417380 | 0.829880 | 4.018937e-55 | -8.615850e-47 |
| Msa1417370 | Msa1417380 | 0.850172 | 2.016002e-60 | -8.615850e-47 |
| Msa1417380 | Msa1427100 | 0.823809 | 1.134014e-53 | -8.615850e-47 |
| Msa1417380 | Msa1434220 | 0.871874 | 4.900798e-67 | -8.615850e-47 |
| Msa1417380 | Msa1437810 | 0.811019 | 8.629633e-51 | -8.615850e-47 |
| Msa1417380 | Msa1452710 | 0.804496 | 2.100409e-49 | -8.615850e-47 |
| Msa0611210 | Msa1417380 | 0.838697 | 2.464601e-57 | -8.615850e-47 |
| Msa0651550 | Msa1417380 | 0.828660 | 7.944358e-55 | -8.615850e-47 |
| Msa0657720 | Msa1417380 | 0.831153 | 1.961959e-55 | -8.615850e-47 |
| Msa0674480 | Msa1417380 | 0.826451 | 2.693635e-54 | -8.615850e-47 |
| Msa0674560 | Msa1417380 | 0.885785 | 6.028281e-72 | -8.615850e-47 |
| Msa0678380 | Msa1417380 | 0.839563 | 1.470072e-57 | -8.615850e-47 |
| Msa0702790 | Msa1417380 | 0.816760 | 4.683839e-52 | -8.615850e-47 |
| Msa0706230 | Msa1417380 | 0.823161 | 1.607472e-53 | -8.615850e-47 |
| Msa0729270 | Msa1417380 | 0.811209 | 7.848144e-51 | -8.615850e-47 |
| Msa0733010 | Msa1417380 | 0.801464 | 8.893085e-49 | -8.615850e-47 |
| Msa0734250 | Msa1417380 | 0.846901 | 1.623327e-59 | -8.615850e-47 |
| Msa0738700 | Msa1417380 | 0.804576 | 2.022007e-49 | -8.615850e-47 |
| Msa0740710 | Msa1417380 | 0.804607 | 1.992062e-49 | -8.615850e-47 |
| Msa0792370 | Msa1417380 | 0.838687 | 2.480594e-57 | -8.615850e-47 |
| Msa0795750 | Msa1417380 | 0.830205 | 3.347356e-55 | -8.615850e-47 |
| Msa0819170 | Msa1417380 | 0.805750 | 1.148350e-49 | -8.615850e-47 |
| Msa0828950 | Msa1417380 | 0.818294 | 2.112703e-52 | -8.615850e-47 |
| Msa0829300 | Msa1417380 | 0.821974 | 3.034869e-53 | -8.615850e-47 |
| Msa0829330 | Msa1417380 | 0.811224 | 7.791577e-51 | -8.615850e-47 |
| Msa0833530 | Msa1417380 | 0.839328 | 1.691872e-57 | -8.615850e-47 |
| Msa0125360 | Msa1417380 | 0.801891 | 7.270527e-49 | -8.615850e-47 |
| Msa0126000 | Msa1417380 | -0.815572 | 8.630005e-52 | -8.615850e-47 |
| Msa0152220 | Msa1417380 | 0.820015 | 8.575358e-53 | -8.615850e-47 |
| Msa0168310 | Msa1417380 | 0.808876 | 2.497238e-50 | -8.615850e-47 |
| Msa0175750 | Msa1417380 | 0.805924 | 1.055469e-49 | -8.615850e-47 |
| Msa0235290 | Msa1417380 | 0.818262 | 2.148027e-52 | -8.615850e-47 |
| Msa1225860 | Msa1417380 | -0.840677 | 7.530482e-58 | -8.615850e-47 |
| Msa1268420 | Msa1417380 | 0.805306 | 1.422737e-49 | -8.615850e-47 |
| Msa1298220 | Msa1417380 | 0.814997 | 1.158267e-51 | -8.615850e-47 |
| Msa1299400 | Msa1417380 | -0.802677 | 5.007980e-49 | -8.615850e-47 |
| Msa1341840 | Msa1417380 | 0.811888 | 5.589418e-51 | -8.615850e-47 |
| Msa0365210 | Msa1417380 | 0.834042 | 3.766274e-56 | -8.615850e-47 |
| Msa0375330 | Msa1417380 | -0.813456 | 2.535957e-51 | -8.615850e-47 |
| Msa0408380 | Msa1417380 | 0.802281 | 6.042566e-49 | -8.615850e-47 |
| Msa0412790 | Msa1417380 | 0.866508 | 2.709226e-65 | -8.615850e-47 |
| Msa0422440 | Msa1417380 | -0.815870 | 7.406737e-52 | -8.615850e-47 |
| Msa0435210 | Msa1417380 | 0.808814 | 2.574299e-50 | -8.615850e-47 |
| Msa0457560 | Msa1417380 | 0.979102 | 3.094258e-147 | -8.615850e-47 |
| Msa0457570 | Msa1417380 | 0.879304 | 1.390006e-69 | -8.615850e-47 |
| Msa1032470 | Msa1417380 | 0.807617 | 4.631892e-50 | -8.615850e-47 |
| Msa1044250 | Msa1417380 | 0.803183 | 3.937416e-49 | -8.615850e-47 |
| Msa1044680 | Msa1417380 | 0.824479 | 7.895585e-54 | -8.615850e-47 |
| Msa1064370 | Msa1417380 | 0.809921 | 1.489852e-50 | -8.615850e-47 |
| Msa1065470 | Msa1417380 | 0.803073 | 4.149251e-49 | -8.615850e-47 |
| Msa1072940 | Msa1417380 | 0.807685 | 4.478820e-50 | -8.615850e-47 |
| Msa1092310 | Msa1417380 | 0.848064 | 7.775573e-60 | -8.615850e-47 |
| Msa1105640 | Msa1417380 | 0.823468 | 1.363228e-53 | -8.615850e-47 |
| Msa1106590 | Msa1417380 | 0.804897 | 1.732789e-49 | -8.615850e-47 |
| Msa0240900 | Msa1417380 | 0.801797 | 7.600743e-49 | -8.615850e-47 |
| Msa0244640 | Msa1417380 | 0.827149 | 1.834781e-54 | -8.615850e-47 |
| Msa0283330 | Msa1417380 | 0.813957 | 1.967333e-51 | -8.615850e-47 |
| Msa0300680 | Msa1417380 | 0.802656 | 5.058555e-49 | -8.615850e-47 |
| Msa0307670 | Msa1417380 | 0.845189 | 4.742835e-59 | -8.615850e-47 |
| Msa0313900 | Msa1417380 | 0.822126 | 2.799289e-53 | -8.615850e-47 |
| Msa0321620 | Msa1417380 | 0.835099 | 2.043951e-56 | -8.615850e-47 |
| Msa0330520 | Msa1417380 | 0.810186 | 1.306302e-50 | -8.615850e-47 |
| Msa0337580 | Msa1417380 | 0.816766 | 4.668139e-52 | -8.615850e-47 |
| Msa1125250 | Msa1417380 | 0.845435 | 4.068960e-59 | -8.615850e-47 |
| Msa1130060 | Msa1417380 | 0.805383 | 1.370884e-49 | -8.615850e-47 |
| Msa1154320 | Msa1417380 | 0.811631 | 6.355352e-51 | -8.615850e-47 |
| Msa1155170 | Msa1417380 | -0.839798 | 1.277165e-57 | -8.615850e-47 |
| Msa1184890 | Msa1417380 | 0.804852 | 1.770806e-49 | -8.615850e-47 |
| Msa1186020 | Msa1417380 | 0.817493 | 3.204519e-52 | -8.615850e-47 |
| Msa1206460 | Msa1417380 | 0.808163 | 3.544017e-50 | -8.615850e-47 |
| Msa1213890 | Msa1417380 | 0.805517 | 1.284614e-49 | -8.615850e-47 |
| Msa0501380 | Msa1417380 | 0.833994 | 3.873127e-56 | -8.615850e-47 |
| Msa0501440 | Msa1417380 | 0.818121 | 2.311860e-52 | -8.615850e-47 |
| Msa0512630 | Msa1417380 | 0.821099 | 4.832844e-53 | -8.615850e-47 |
| Msa0513970 | Msa1417380 | 0.995958 | 8.851854e-222 | -8.615850e-47 |
| Msa0519750 | Msa1417380 | 0.820123 | 8.098417e-53 | -8.615850e-47 |
| Msa0519820 | Msa1417380 | 0.815360 | 9.619295e-52 | -8.615850e-47 |
| Msa0519830 | Msa1417380 | 0.812068 | 5.105594e-51 | -8.615850e-47 |
| Msa0523490 | Msa1417380 | -0.823274 | 1.512960e-53 | -8.615850e-47 |
| Msa0528570 | Msa1417380 | 0.833311 | 5.737602e-56 | -8.615850e-47 |
| Msa0529030 | Msa1417380 | 0.808991 | 2.358983e-50 | -8.615850e-47 |
| Msa0530780 | Msa1417380 | 0.801535 | 8.602733e-49 | -8.615850e-47 |
| Msa0543560 | Msa1417380 | 0.829829 | 4.135397e-55 | -8.615850e-47 |
| Msa0544490 | Msa1417380 | 0.815388 | 9.483611e-52 | -8.615850e-47 |
| Msa0576790 | Msa1417380 | 0.814906 | 1.213567e-51 | -8.615850e-47 |
| Msa0583360 | Msa1417380 | -0.838447 | 2.860819e-57 | -8.615850e-47 |
| Msa0590150 | Msa1417380 | 0.819835 | 9.425299e-53 | -8.615850e-47 |
| Msa0596840 | Msa1417380 | 0.822023 | 2.957415e-53 | -8.615850e-47 |
| Msa0599420 | Msa1417380 | 0.806627 | 7.503893e-50 | -8.615850e-47 |
| Msa0859290 | Msa1417380 | 0.833500 | 5.147158e-56 | -8.615850e-47 |
| Msa0876930 | Msa1417380 | 0.804364 | 2.238540e-49 | -8.615850e-47 |
| Msa0876940 | Msa1417380 | 0.819113 | 1.377031e-52 | -8.615850e-47 |
| Msa0894790 | Msa1417380 | 0.814998 | 1.157680e-51 | -8.615850e-47 |
| Msa0921590 | Msa1417380 | 0.807618 | 4.628012e-50 | -8.615850e-47 |
| Msa0930270 | Msa1417380 | 0.807926 | 3.980879e-50 | -8.615850e-47 |
| Msa0937230 | Msa1417380 | 0.802482 | 5.494107e-49 | -8.615850e-47 |
| Msa0940910 | Msa1417380 | 0.800828 | 1.200252e-48 | -8.615850e-47 |
| Msa0967170 | Msa1417380 | 0.813651 | 2.298207e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1417380 | MtrunA17_Chr3g0104551 | 97.092 | 894 | 16 | 1 | 1 | 894 | 1 | 884 | 0.0 | 1791 |
| Msa1417380 | MtrunA17_Chr2g0298121 | 46.577 | 964 | 443 | 13 | 1 | 894 | 1 | 962 | 0.0 | 828 |
| Msa1417380 | MtrunA17_Chr1g0173371 | 39.042 | 981 | 500 | 13 | 6 | 894 | 6 | 980 | 0.0 | 697 |
| Msa1417380 | MtrunA17_Chr7g0257461 | 43.461 | 757 | 418 | 7 | 1 | 747 | 1 | 757 | 0.0 | 644 |
| Msa1417380 | MtrunA17_Chr7g0257461 | 45.455 | 88 | 46 | 1 | 809 | 894 | 896 | 983 | 1.27e-14 | 78.6 |
| Msa1417380 | MtrunA17_Chr4g0072071 | 42.408 | 573 | 269 | 8 | 383 | 894 | 32 | 604 | 1.72e-147 | 449 |
| Msa1417380 | MtrunA17_Chr4g0072061 | 50.291 | 344 | 153 | 8 | 57 | 391 | 6 | 340 | 9.23e-106 | 331 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1417380 | AT2G29890.1 | 54.496 | 912 | 394 | 5 | 1 | 894 | 1 | 909 | 0.0 | 1027 |
| Msa1417380 | AT2G29890.5 | 54.496 | 912 | 394 | 5 | 1 | 894 | 1 | 909 | 0.0 | 1027 |
| Msa1417380 | AT2G29890.2 | 54.486 | 914 | 393 | 6 | 1 | 894 | 1 | 911 | 0.0 | 1026 |
| Msa1417380 | AT2G29890.3 | 53.419 | 936 | 391 | 8 | 1 | 894 | 1 | 933 | 0.0 | 1018 |
| Msa1417380 | AT2G29890.4 | 53.289 | 912 | 388 | 6 | 1 | 894 | 1 | 892 | 0.0 | 991 |
| Msa1417380 | AT4G30160.3 | 45.492 | 976 | 448 | 13 | 1 | 894 | 1 | 974 | 0.0 | 829 |
| Msa1417380 | AT4G30160.4 | 45.492 | 976 | 448 | 13 | 1 | 894 | 1 | 974 | 0.0 | 829 |
| Msa1417380 | AT4G30160.1 | 45.492 | 976 | 448 | 13 | 1 | 894 | 1 | 974 | 0.0 | 829 |
| Msa1417380 | AT4G30160.2 | 45.076 | 985 | 448 | 14 | 1 | 894 | 1 | 983 | 0.0 | 821 |
| Msa1417380 | AT5G57320.2 | 44.191 | 964 | 466 | 14 | 1 | 894 | 1 | 962 | 0.0 | 818 |
| Msa1417380 | AT5G57320.1 | 44.191 | 964 | 466 | 14 | 1 | 894 | 1 | 962 | 0.0 | 818 |
| Msa1417380 | AT3G57410.4 | 46.092 | 742 | 390 | 6 | 1 | 734 | 1 | 740 | 0.0 | 667 |
| Msa1417380 | AT3G57410.4 | 55.000 | 60 | 27 | 0 | 835 | 894 | 906 | 965 | 2.71e-12 | 71.2 |
| Msa1417380 | AT3G57410.1 | 46.092 | 742 | 390 | 6 | 1 | 734 | 1 | 740 | 0.0 | 667 |
| Msa1417380 | AT3G57410.1 | 55.000 | 60 | 27 | 0 | 835 | 894 | 906 | 965 | 2.71e-12 | 71.2 |
| Msa1417380 | AT3G57410.9 | 46.092 | 742 | 390 | 6 | 1 | 734 | 1 | 740 | 0.0 | 667 |
| Msa1417380 | AT3G57410.9 | 55.000 | 60 | 27 | 0 | 835 | 894 | 906 | 965 | 2.71e-12 | 71.2 |
| Msa1417380 | AT3G57410.5 | 46.092 | 742 | 390 | 6 | 1 | 734 | 1 | 740 | 0.0 | 667 |
| Msa1417380 | AT3G57410.5 | 55.000 | 60 | 27 | 0 | 835 | 894 | 906 | 965 | 2.71e-12 | 71.2 |
| Msa1417380 | AT3G57410.3 | 46.092 | 742 | 390 | 6 | 1 | 734 | 1 | 740 | 0.0 | 667 |
| Msa1417380 | AT3G57410.3 | 55.000 | 60 | 27 | 0 | 835 | 894 | 906 | 965 | 2.71e-12 | 71.2 |
| Msa1417380 | AT3G57410.2 | 46.092 | 742 | 390 | 6 | 1 | 734 | 1 | 740 | 0.0 | 667 |
| Msa1417380 | AT3G57410.2 | 55.000 | 60 | 27 | 0 | 835 | 894 | 906 | 965 | 2.71e-12 | 71.2 |
| Msa1417380 | AT3G57410.7 | 46.092 | 742 | 390 | 6 | 1 | 734 | 1 | 740 | 0.0 | 667 |
| Msa1417380 | AT3G57410.7 | 55.000 | 60 | 27 | 0 | 835 | 894 | 906 | 965 | 2.71e-12 | 71.2 |
| Msa1417380 | AT3G57410.8 | 46.092 | 742 | 390 | 6 | 1 | 734 | 1 | 740 | 0.0 | 667 |
| Msa1417380 | AT3G57410.8 | 55.000 | 60 | 27 | 0 | 835 | 894 | 906 | 965 | 2.71e-12 | 71.2 |
| Msa1417380 | AT3G57410.6 | 46.269 | 737 | 386 | 6 | 6 | 734 | 6 | 740 | 0.0 | 665 |
| Msa1417380 | AT2G41740.2 | 46.008 | 739 | 385 | 7 | 6 | 734 | 4 | 738 | 0.0 | 663 |
| Msa1417380 | AT2G41740.2 | 41.935 | 124 | 68 | 2 | 775 | 894 | 853 | 976 | 2.84e-16 | 84.3 |
| Msa1417380 | AT2G41740.1 | 46.008 | 739 | 385 | 7 | 6 | 734 | 4 | 738 | 0.0 | 663 |
| Msa1417380 | AT2G41740.1 | 41.935 | 124 | 68 | 2 | 775 | 894 | 853 | 976 | 2.84e-16 | 84.3 |
| Msa1417380 | AT3G57410.10 | 46.271 | 724 | 379 | 6 | 6 | 721 | 6 | 727 | 0.0 | 649 |
Find 200 sgRNAs with CRISPR-Local
Find 459 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATAATAGGCATTATCTTTA+TGG | 0.120321 | tig0024470:-57517 | None:intergenic |
| CTCATTATGACATTCATTAT+TGG | 0.143351 | tig0024470:+58056 | Msa1417380:CDS |
| CTCCAATTGTAAAGCTATTT+TGG | 0.146225 | tig0024470:+59016 | Msa1417380:CDS |
| CCTTCCATTACAACATAAAT+AGG | 0.191577 | tig0024470:-62043 | None:intergenic |
| TTCGGTCACACTTTACTAAT+TGG | 0.209120 | tig0024470:+59654 | Msa1417380:CDS |
| GCCAAAGAGAGATTTATATT+TGG | 0.210127 | tig0024470:+61702 | Msa1417380:CDS |
| ATAGAAACTTCTGTGATTCT+TGG | 0.247886 | tig0024470:-58337 | None:intergenic |
| ATGGTATTGTTGCAGATTAT+TGG | 0.260452 | tig0024470:+62238 | Msa1417380:intron |
| AGTTTGTAGAAAGCAGATTT+TGG | 0.272885 | tig0024470:-63186 | None:intergenic |
| GGAGAGTTCTGGAGTTTATT+TGG | 0.279925 | tig0024470:+58943 | Msa1417380:CDS |
| TTAAGGAATTACCTCTCTTT+TGG | 0.280881 | tig0024470:-63041 | None:intergenic |
| CTATTGTGATGATATGCTTT+TGG | 0.291103 | tig0024470:+63405 | Msa1417380:three_prime_UTR |
| GTTTCGTCCCTTCCATTTCC+TGG | 0.291207 | tig0024470:-60100 | None:intergenic |
| CCAAAGAGAGATTTATATTT+GGG | 0.291213 | tig0024470:+61703 | Msa1417380:CDS |
| CAGGGAAAACTTTGTTCAAT+TGG | 0.313064 | tig0024470:+59191 | Msa1417380:CDS |
| TTCTCAGTGGATTGGAAGTT+TGG | 0.319725 | tig0024470:+57833 | Msa1417380:intron |
| AATGTGAATGTGAGAATATT+TGG | 0.325219 | tig0024470:+56503 | Msa1417380:five_prime_UTR |
| AAACAGAAACTAACCATAAC+TGG | 0.332152 | tig0024470:-60404 | None:intergenic |
| TTTGATCGCTGTTCTTCTTT+CGG | 0.335184 | tig0024470:-59315 | None:intergenic |
| CCCAAATATAAATCTCTCTT+TGG | 0.338138 | tig0024470:-61703 | None:intergenic |
| TCCAAGTCTTTATTGATAAT+AGG | 0.343729 | tig0024470:-57531 | None:intergenic |
| GATCCTGCAGCGTTCAATAT+AGG | 0.353176 | tig0024470:+58303 | Msa1417380:CDS |
| ATAACCCTGATGCTTGAATA+TGG | 0.353928 | tig0024470:-59820 | None:intergenic |
| ATTCTGATGTCGGAGAGTTC+TGG | 0.367136 | tig0024470:+58932 | Msa1417380:CDS |
| AGATTCTTCAAAGAGCTTCT+TGG | 0.369550 | tig0024470:-62446 | None:intergenic |
| CTCAGCCATATTCAAGCATC+AGG | 0.370488 | tig0024470:+59815 | Msa1417380:intron |
| TTCCCTTCCCTCACAGATAC+AGG | 0.377925 | tig0024470:-61275 | None:intergenic |
| GTAGAGGATGGAAAATTTGT+TGG | 0.378462 | tig0024470:+58907 | Msa1417380:intron |
| CAGTATACATTTCCAGGAAA+TGG | 0.380719 | tig0024470:+60088 | Msa1417380:CDS |
| GAGAACTATGTATGCACTTC+CGG | 0.386632 | tig0024470:-57914 | None:intergenic |
| TGGATGGCCTGCATATTATC+TGG | 0.386832 | tig0024470:-60907 | None:intergenic |
| CACCAAAATAGCTTTACAAT+TGG | 0.387240 | tig0024470:-59018 | None:intergenic |
| GAAGGCGGGTCTCGAGGAAT+TGG | 0.392914 | tig0024470:-58976 | None:intergenic |
| TGTTCTTCTTTCGGTCAATA+AGG | 0.393207 | tig0024470:-59306 | None:intergenic |
| CTTTCTACAAACTCCCTAGA+TGG | 0.394348 | tig0024470:+63196 | Msa1417380:CDS |
| ATCCTGCAGCGTTCAATATA+GGG | 0.395581 | tig0024470:+58304 | Msa1417380:CDS |
| TTGATGCCTGTCACTGGATT+CGG | 0.399822 | tig0024470:-63013 | None:intergenic |
| TAAACTTGCAGTCTCATTTG+AGG | 0.404977 | tig0024470:-62918 | None:intergenic |
| CATAGTATTGATGTGGGAAA+TGG | 0.408159 | tig0024470:-60360 | None:intergenic |
| ACCTTTGGCTCTTTCTTGAA+TGG | 0.408574 | tig0024470:-58701 | None:intergenic |
| ACGGATTCGCTCCTGCAGTT+TGG | 0.409113 | tig0024470:-57563 | None:intergenic |
| CATTTCCCACATCAATACTA+TGG | 0.410826 | tig0024470:+60361 | Msa1417380:CDS |
| CCTTGAATATGATTAACCTT+TGG | 0.412244 | tig0024470:-60690 | None:intergenic |
| GGCTCAGACTATAGGCAATT+AGG | 0.413950 | tig0024470:+62391 | Msa1417380:CDS |
| CTTGAGTTGGATGCAGCCTT+AGG | 0.418274 | tig0024470:+58281 | Msa1417380:CDS |
| CTTCCATTACAACATAAATA+GGG | 0.420812 | tig0024470:-62042 | None:intergenic |
| AATCAAGTGTTGCTTTAAGT+TGG | 0.421407 | tig0024470:+57481 | Msa1417380:five_prime_UTR |
| AGAACGTCCCAGAAAATATC+AGG | 0.421877 | tig0024470:-61302 | None:intergenic |
| TCAAGAAAGAGCCAAAGGTT+TGG | 0.424877 | tig0024470:+58705 | Msa1417380:CDS |
| TCGAGACCCGCCTTCTAGTC+AGG | 0.426033 | tig0024470:+58984 | Msa1417380:CDS |
| TTGAACAACCTCCAAACCTT+TGG | 0.426187 | tig0024470:-58716 | None:intergenic |
| GATTGGAAAGTGCCATCTTT+CGG | 0.427222 | tig0024470:+59636 | Msa1417380:CDS |
| AGTTTGCAGAATATAGCAAT+AGG | 0.429248 | tig0024470:-61052 | None:intergenic |
| TTATGACATTCATTATTGGC+TGG | 0.432853 | tig0024470:+58060 | Msa1417380:CDS |
| ACTGTAAAGTCTTGTGTGTT+CGG | 0.433785 | tig0024470:-60047 | None:intergenic |
| GTAGCACTGTTTCGAGTTCA+AGG | 0.436359 | tig0024470:+60877 | Msa1417380:CDS |
| GTAGTGCAGTATACATTTCC+AGG | 0.437379 | tig0024470:+60082 | Msa1417380:CDS |
| ATCTAGAAGTAATCCAGTTA+TGG | 0.440446 | tig0024470:+60391 | Msa1417380:CDS |
| AGTCCCTATTTATGTTGTAA+TGG | 0.441768 | tig0024470:+62039 | Msa1417380:CDS |
| GCCACGGATTCCTGACTAGA+AGG | 0.442065 | tig0024470:-58994 | None:intergenic |
| TATTTGGGTTGGATTGCATT+CGG | 0.445728 | tig0024470:+61718 | Msa1417380:CDS |
| GGCTCATCATCCACTTCATC+AGG | 0.445910 | tig0024470:-59858 | None:intergenic |
| AAATGCGAGGTGGCCACAAT+AGG | 0.446540 | tig0024470:+58766 | Msa1417380:CDS |
| CCTCGACAGGATAAATCTAC+AGG | 0.451682 | tig0024470:+59172 | Msa1417380:intron |
| ACTTTATGTTCTCAGTGGAT+TGG | 0.455619 | tig0024470:+57825 | Msa1417380:intron |
| CTGGGACGTTCTTGGTGGAA+AGG | 0.455929 | tig0024470:+61313 | Msa1417380:CDS |
| TCAAAGAGCTTCTTGGCCGC+TGG | 0.456525 | tig0024470:-62439 | None:intergenic |
| CAGTTCTGTTGCTGAAGAAT+CGG | 0.458599 | tig0024470:-62891 | None:intergenic |
| ACTACTTCTTCGACGGCCAT+TGG | 0.461985 | tig0024470:-62347 | None:intergenic |
| CCAAAGGTTAATCATATTCA+AGG | 0.462892 | tig0024470:+60690 | Msa1417380:CDS |
| GGAGGTTGTTCAATATATCA+AGG | 0.463674 | tig0024470:+58726 | Msa1417380:CDS |
| TTACCAGCACTGTTATTAGC+AGG | 0.464732 | tig0024470:-62469 | None:intergenic |
| ACCGTTAGGGGTAGAGTCCC+TGG | 0.464907 | tig0024470:-62302 | None:intergenic |
| GTTAAATTGATGCCTGTCAC+TGG | 0.465308 | tig0024470:-63019 | None:intergenic |
| GGAGTGCAGGCTCAGACTAT+AGG | 0.467038 | tig0024470:+62383 | Msa1417380:CDS |
| GTGCCGCTGCGATCTATAGA+TGG | 0.468107 | tig0024470:-59879 | None:intergenic |
| GAAATGGATGTCCTTGTTGA+AGG | 0.468405 | tig0024470:+62004 | Msa1417380:CDS |
| TACATTCAGCAAAGAAATGC+TGG | 0.469130 | tig0024470:+59220 | Msa1417380:CDS |
| CGAAGGTCTGACTCTGACAC+TGG | 0.469911 | tig0024470:-57880 | None:intergenic |
| TTCCCTATATTGAACGCTGC+AGG | 0.470458 | tig0024470:-58306 | None:intergenic |
| ACTATAGGCAATTAGGCAAT+CGG | 0.471083 | tig0024470:+62398 | Msa1417380:CDS |
| CCTTGTTTAATACCGATTGA+AGG | 0.471785 | tig0024470:+58371 | Msa1417380:CDS |
| AGAGAGATTTATATTTGGGT+TGG | 0.471935 | tig0024470:+61707 | Msa1417380:CDS |
| GCTTCTTGGCCGCTGGAGTA+GGG | 0.472604 | tig0024470:-62432 | None:intergenic |
| CCTATTTATGTTGTAATGGA+AGG | 0.475164 | tig0024470:+62043 | Msa1417380:CDS |
| TAGTCTGAGCCTGCACTCCT+AGG | 0.476520 | tig0024470:-62379 | None:intergenic |
| ACCACTCGAAGTTGCTCGTA+AGG | 0.476879 | tig0024470:-62986 | None:intergenic |
| GCAGCTATGTATACATGGAT+TGG | 0.478295 | tig0024470:+61078 | Msa1417380:CDS |
| CTTCAACTCAGGAGACTTCA+AGG | 0.479650 | tig0024470:+61526 | Msa1417380:intron |
| CTGAAGCAGCTATGTATACA+TGG | 0.481079 | tig0024470:+61073 | Msa1417380:CDS |
| CAAGTGTTGCTTTAAGTTGG+CGG | 0.484713 | tig0024470:+57484 | Msa1417380:five_prime_UTR |
| GAAGTAAACACTCCTTCAAT+CGG | 0.485588 | tig0024470:-58383 | None:intergenic |
| CGCTCCTGCAGTTTGGAATG+CGG | 0.486778 | tig0024470:-57556 | None:intergenic |
| TATGACATTCATTATTGGCT+GGG | 0.489091 | tig0024470:+58061 | Msa1417380:CDS |
| AGTCAGCCTGTACACATGTA+AGG | 0.489217 | tig0024470:+58436 | Msa1417380:CDS |
| TCAAAGCAAGGGAATTTGAA+TGG | 0.490607 | tig0024470:+58404 | Msa1417380:CDS |
| CAATTCTGAAAGGAAACTCC+AGG | 0.494273 | tig0024470:+62284 | Msa1417380:CDS |
| GCCACATAGTAAAGCAAGAA+TGG | 0.494650 | tig0024470:-56479 | None:intergenic |
| GGCGGAATATCCAAAAGAAA+AGG | 0.498002 | tig0024470:+61334 | Msa1417380:CDS |
| CCAAAAGAAAAGGAGATTCA+AGG | 0.498307 | tig0024470:+61344 | Msa1417380:CDS |
| TTCAATGATGACCTCAGAAA+AGG | 0.498549 | tig0024470:-58613 | None:intergenic |
| GAGACTAGGCTTTACGAAGA+AGG | 0.499203 | tig0024470:+59689 | Msa1417380:CDS |
| TCATACTCTTCTTGATAGAA+TGG | 0.500584 | tig0024470:+61122 | Msa1417380:CDS |
| GCTCCTGCAGTTTGGAATGC+GGG | 0.505209 | tig0024470:-57555 | None:intergenic |
| AGAAAGAGCCAAAGGTTTGG+AGG | 0.505490 | tig0024470:+58708 | Msa1417380:CDS |
| TTTGCAGGTGGATTCAAGCT+TGG | 0.511419 | tig0024470:+58244 | Msa1417380:intron |
| ACCATTCTTGCTTTACTATG+TGG | 0.511542 | tig0024470:+56478 | Msa1417380:five_prime_UTR |
| AGCTTCTTGGCCGCTGGAGT+AGG | 0.512626 | tig0024470:-62433 | None:intergenic |
| TTGAACGCTGCAGGATCCTA+AGG | 0.513188 | tig0024470:-58297 | None:intergenic |
| CTATGTTGTCCACGTGAAAG+AGG | 0.515019 | tig0024470:+58463 | Msa1417380:CDS |
| TATGATCTCTTGCTGAAGAA+AGG | 0.516468 | tig0024470:-61104 | None:intergenic |
| TTTGTTGGCGATTCTGATGT+CGG | 0.520132 | tig0024470:+58922 | Msa1417380:CDS |
| CTGACACTGGAACCAACTGC+TGG | 0.527054 | tig0024470:-57867 | None:intergenic |
| GCCTATTATCAATAAAGACT+TGG | 0.530965 | tig0024470:+57530 | Msa1417380:CDS |
| CCTTCAATCGGTATTAAACA+AGG | 0.533777 | tig0024470:-58371 | None:intergenic |
| CTTCAGGTTTGGCGAGTCGA+TGG | 0.534248 | tig0024470:+59998 | Msa1417380:intron |
| TCACCTCTACCTAGGAGTGC+AGG | 0.534318 | tig0024470:+62370 | Msa1417380:CDS |
| GCTGGGAAATGACACAAAGA+AGG | 0.546293 | tig0024470:+58078 | Msa1417380:CDS |
| CGGATTCCTGACTAGAAGGC+GGG | 0.550672 | tig0024470:-58990 | None:intergenic |
| AGTAAAGTGTGACCGAAAGA+TGG | 0.551637 | tig0024470:-59648 | None:intergenic |
| TACATGTGTACAGGCTGACT+TGG | 0.553621 | tig0024470:-58433 | None:intergenic |
| GTTCAATATAGGGAAATTCA+AGG | 0.553914 | tig0024470:+58314 | Msa1417380:CDS |
| GAACTCGAAACAGTGCTACC+AGG | 0.554752 | tig0024470:-60873 | None:intergenic |
| TGTGTTCGGTAACTGAAAGA+AGG | 0.555340 | tig0024470:-60033 | None:intergenic |
| TCTCCTGCTAATAACAGTGC+TGG | 0.556720 | tig0024470:+62466 | Msa1417380:CDS |
| CCATACTTGATCAACTTGGA+TGG | 0.558678 | tig0024470:-60923 | None:intergenic |
| TAAACCATACTTGATCAACT+TGG | 0.558685 | tig0024470:-60927 | None:intergenic |
| ATCAGACAAGGCACTTGAGT+TGG | 0.559150 | tig0024470:+58268 | Msa1417380:CDS |
| AGAAGCTCTCAACCTCGGCT+TGG | 0.559559 | tig0024470:+61757 | Msa1417380:CDS |
| GTTTCTCCGAATCCAGTGAC+AGG | 0.560444 | tig0024470:+63007 | Msa1417380:CDS |
| GAGTTCTGGAGTTTATTTGG+TGG | 0.561657 | tig0024470:+58946 | Msa1417380:CDS |
| AAGAAGCGTATAGAAGAAAA+CGG | 0.563901 | tig0024470:+60823 | Msa1417380:CDS |
| GAGCCTGCACTCCTAGGTAG+AGG | 0.564574 | tig0024470:-62373 | None:intergenic |
| TAGCTTTACAATTGGAGCCA+CGG | 0.566708 | tig0024470:-59010 | None:intergenic |
| GGCTCAAATTCACGAGGGAA+AGG | 0.567263 | tig0024470:+60642 | Msa1417380:intron |
| TACCTGTATCTGTGAGGGAA+GGG | 0.569592 | tig0024470:+61273 | Msa1417380:CDS |
| TACAAGTCCAGATAATATGC+AGG | 0.569774 | tig0024470:+60900 | Msa1417380:CDS |
| AGTCTCCCTTACATGTGTAC+AGG | 0.572174 | tig0024470:-58442 | None:intergenic |
| AAACAAGCTGAAGATGTCAC+TGG | 0.572603 | tig0024470:+63224 | Msa1417380:CDS |
| GGAGTGTTTACTTCAAAGCA+AGG | 0.574599 | tig0024470:+58392 | Msa1417380:CDS |
| GTATTTATTCCAACCTATTG+TGG | 0.574650 | tig0024470:-58779 | None:intergenic |
| ACCATTCAAGAAAGAGCCAA+AGG | 0.574717 | tig0024470:+58700 | Msa1417380:CDS |
| AATCAGCCATAGTATTGATG+TGG | 0.575918 | tig0024470:-60367 | None:intergenic |
| CTACCTGTATCTGTGAGGGA+AGG | 0.575928 | tig0024470:+61272 | Msa1417380:CDS |
| AGCGGTTCTATCATTTCCAA+TGG | 0.578457 | tig0024470:+62331 | Msa1417380:CDS |
| CCCTTACGAGCAACTTCGAG+TGG | 0.581361 | tig0024470:+62985 | Msa1417380:CDS |
| GTGTATTGAAAACCAGCAGT+TGG | 0.581938 | tig0024470:+57855 | Msa1417380:CDS |
| GGTTCTACAGAAAACTGAGA+AGG | 0.582005 | tig0024470:-56578 | None:intergenic |
| TTCAAGCTTGGCATCAGACA+AGG | 0.582711 | tig0024470:+58256 | Msa1417380:CDS |
| AGAAAGCTTGCAATTCTGAA+AGG | 0.583090 | tig0024470:+62274 | Msa1417380:CDS |
| GAAAGAGCTTCCTGATGAAG+TGG | 0.583929 | tig0024470:+59848 | Msa1417380:CDS |
| GATCCCGCATTCCAAACTGC+AGG | 0.587803 | tig0024470:+57552 | Msa1417380:CDS |
| ATACATTTCCAGGAAATGGA+AGG | 0.590349 | tig0024470:+60092 | Msa1417380:CDS |
| TGAAACTCACAATGAAAACC+TGG | 0.590439 | tig0024470:+60855 | Msa1417380:CDS |
| GTGTTCGGTAACTGAAAGAA+GGG | 0.592436 | tig0024470:-60032 | None:intergenic |
| TGACTAGAAGGCGGGTCTCG+AGG | 0.593017 | tig0024470:-58982 | None:intergenic |
| TCCAGGGACTCTACCCCTAA+CGG | 0.597480 | tig0024470:+62301 | Msa1417380:CDS |
| CTCGACAGGATAAATCTACA+GGG | 0.599233 | tig0024470:+59173 | Msa1417380:intron |
| TATATCAAGGATAATAAGCA+TGG | 0.599943 | tig0024470:+58739 | Msa1417380:CDS |
| GCCTTCTAGTCAGGAATCCG+TGG | 0.600268 | tig0024470:+58993 | Msa1417380:CDS |
| GCTTGGCAGTAGATGTGTAA+TGG | 0.601151 | tig0024470:+60138 | Msa1417380:CDS |
| AAACTAAGAAGTAAGAGTGA+TGG | 0.602389 | tig0024470:-56549 | None:intergenic |
| ACCCCTAACGGTCACAAAAG+CGG | 0.603179 | tig0024470:+62313 | Msa1417380:CDS |
| TTTGCATTGAAAATAACCAA+AGG | 0.603205 | tig0024470:+61389 | Msa1417380:CDS |
| CAATAATGAATGTCATAATG+AGG | 0.605850 | tig0024470:-58055 | None:intergenic |
| GAAGTAGTTCACCTCTACCT+AGG | 0.605938 | tig0024470:+62362 | Msa1417380:CDS |
| GGCCTAAAACAGTTGAGACT+AGG | 0.609206 | tig0024470:+59675 | Msa1417380:CDS |
| ACAGATACAGGTAGCTGTGT+CGG | 0.609783 | tig0024470:-61263 | None:intergenic |
| GTCAGCCTGTACACATGTAA+GGG | 0.612700 | tig0024470:+58437 | Msa1417380:CDS |
| CATCAATTTAACCAAAAGAG+AGG | 0.613671 | tig0024470:+63030 | Msa1417380:CDS |
| AATGAATGTCATAATGAGGA+GGG | 0.613936 | tig0024470:-58051 | None:intergenic |
| GAGGTGAACTACTTCTTCGA+CGG | 0.616812 | tig0024470:-62354 | None:intergenic |
| TACTCTTCTTGATAGAATGG+TGG | 0.620837 | tig0024470:+61125 | Msa1417380:CDS |
| AAACAAGAAGCTCTCAACCT+CGG | 0.620869 | tig0024470:+61752 | Msa1417380:CDS |
| TAATGAATGTCATAATGAGG+AGG | 0.621615 | tig0024470:-58052 | None:intergenic |
| CCACTCGAAGTTGCTCGTAA+GGG | 0.623058 | tig0024470:-62985 | None:intergenic |
| TACATTTCCAGGAAATGGAA+GGG | 0.627399 | tig0024470:+60093 | Msa1417380:CDS |
| CACAACTCACCTCTTTCACG+TGG | 0.627739 | tig0024470:-58472 | None:intergenic |
| GGACGTTCTTGGTGGAAAGG+CGG | 0.631780 | tig0024470:+61316 | Msa1417380:CDS |
| ATCAGCCATAGTATTGATGT+GGG | 0.636013 | tig0024470:-60366 | None:intergenic |
| GAGTGTTTACTTCAAAGCAA+GGG | 0.638785 | tig0024470:+58393 | Msa1417380:CDS |
| ACAGCTACCTGTATCTGTGA+GGG | 0.639394 | tig0024470:+61268 | Msa1417380:CDS |
| ATCAAGGATAATAAGCATGG+TGG | 0.651412 | tig0024470:+58742 | Msa1417380:CDS |
| GACCTTCGAAAATTCTACAC+CGG | 0.657929 | tig0024470:+57895 | Msa1417380:CDS |
| AGAGATATACAATTATACGC+AGG | 0.661641 | tig0024470:+61643 | Msa1417380:CDS |
| TCAGCCATATTCAAGCATCA+GGG | 0.667382 | tig0024470:+59816 | Msa1417380:intron |
| ACGGATTCCTGACTAGAAGG+CGG | 0.672389 | tig0024470:-58991 | None:intergenic |
| GCAGACAACTTACCAAGCCG+AGG | 0.672911 | tig0024470:-61769 | None:intergenic |
| TATAGAAGAAAACGGTACGG+TGG | 0.674780 | tig0024470:+60831 | Msa1417380:CDS |
| CACAGCTACCTGTATCTGTG+AGG | 0.674781 | tig0024470:+61267 | Msa1417380:CDS |
| AATTCTGAAAGGAAACTCCA+GGG | 0.675066 | tig0024470:+62285 | Msa1417380:CDS |
| GCGTATAGAAGAAAACGGTA+CGG | 0.687024 | tig0024470:+60828 | Msa1417380:CDS |
| GTTGCTGAAGAATCGGACAG+TGG | 0.690958 | tig0024470:-62884 | None:intergenic |
| TAAGCATGGTGGAAAATGCG+AGG | 0.698213 | tig0024470:+58753 | Msa1417380:CDS |
| TTTCAGGCTCAAATTCACGA+GGG | 0.710089 | tig0024470:+60637 | Msa1417380:intron |
| CTAGCGATAAGCCTTCAACA+AGG | 0.711385 | tig0024470:-62015 | None:intergenic |
| GCATGCATAATACACTCACA+AGG | 0.721980 | tig0024470:-63340 | None:intergenic |
| GAGCCATCTATAGATCGCAG+CGG | 0.737750 | tig0024470:+59876 | Msa1417380:CDS |
| GCATGGTGGAAAATGCGAGG+TGG | 0.738880 | tig0024470:+58756 | Msa1417380:CDS |
| GAACACACAAGACTTTACAG+TGG | 0.748289 | tig0024470:+60049 | Msa1417380:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATTAGTTAAATTCTT+AGG | + | tig0024470:57141-57160 | Msa1417380:intron | 10.0% |
| !!! | TTAAAATTCTTTTAATTCTA+TGG | + | tig0024470:59395-59414 | Msa1417380:intron | 10.0% |
| !! | ATATTTACTAAAAAGAAATT+TGG | - | tig0024470:59423-59442 | None:intergenic | 10.0% |
| !!! | AAAGATATTTTTTTAAGAAT+TGG | - | tig0024470:60775-60794 | None:intergenic | 10.0% |
| !!! | AAAAAATATCTTTTTTTAAG+GGG | + | tig0024470:60782-60801 | Msa1417380:intron | 10.0% |
| !!! | TCATATATTAATTTTTTTGT+AGG | + | tig0024470:61008-61027 | Msa1417380:intron | 10.0% |
| !! | ATTAATCGAATTTAATTAAT+AGG | - | tig0024470:61590-61609 | None:intergenic | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | tig0024470:58807-58826 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | tig0024470:58807-58826 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | tig0024470:58807-58826 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | tig0024470:58807-58826 | None:intergenic | 100.0% |
| !!! | TTATCAAACTTCTTAATTTT+TGG | + | tig0024470:57183-57202 | Msa1417380:intron | 15.0% |
| !! | TTTCAAAGAAAATCATTATA+AGG | - | tig0024470:57591-57610 | None:intergenic | 15.0% |
| !! | TTATATAACAATTATTGTAG+AGG | + | tig0024470:58891-58910 | Msa1417380:intron | 15.0% |
| !!! | AAAGTATTTATTGAAATAAG+AGG | - | tig0024470:59117-59136 | None:intergenic | 15.0% |
| !!! | TTTTAAAAATGTATAATCGA+TGG | - | tig0024470:59381-59400 | None:intergenic | 15.0% |
| !!! | AAAAATATCTTTTTTTAAGG+GGG | + | tig0024470:60783-60802 | Msa1417380:intron | 15.0% |
| !!! | GATTCTTAAATTTTAATTCA+TGG | + | tig0024470:60952-60971 | Msa1417380:intron | 15.0% |
| !! | AATTAGTGAATATTGAATAA+TGG | - | tig0024470:61836-61855 | None:intergenic | 15.0% |
| !! | CAGATACAAAAAATATATTT+GGG | - | tig0024470:63477-63496 | None:intergenic | 15.0% |
| !! | ATACATGAAAAAAAGTCAAA+GGG | - | tig0024470:56652-56671 | None:intergenic | 20.0% |
| !! | TAATTTATGAAAACAGCTTA+TGG | + | tig0024470:56862-56881 | Msa1417380:intron | 20.0% |
| !! | TCAAATTTCAAATATCTACA+TGG | - | tig0024470:57064-57083 | None:intergenic | 20.0% |
| !!! | ATAAACAATTATTTTCACCT+AGG | - | tig0024470:57167-57186 | None:intergenic | 20.0% |
| !! | CTTTACTATATTAAAACTTC+TGG | + | tig0024470:57416-57435 | Msa1417380:intron | 20.0% |
| !! | AGAAAATCATTATAAGGATA+CGG | - | tig0024470:57585-57604 | None:intergenic | 20.0% |
| !!! | ATTGTGCTTATATTTTTGTT+AGG | + | tig0024470:58588-58607 | Msa1417380:intron | 20.0% |
| !!! | AGCTTATATTTGTTTTATGA+GGG | + | tig0024470:58845-58864 | Msa1417380:intron | 20.0% |
| !! | TAACACAATTAAATTGTGAA+TGG | - | tig0024470:59740-59759 | None:intergenic | 20.0% |
| !!! | CAACATTCAAATTTTTGTTT+TGG | + | tig0024470:60477-60496 | Msa1417380:intron | 20.0% |
| !!! | AAAATATCTTTTTTTAAGGG+GGG | + | tig0024470:60784-60803 | Msa1417380:intron | 20.0% |
| !! | AATCGAATTTAATTAATAGG+TGG | - | tig0024470:61587-61606 | None:intergenic | 20.0% |
| !! | TAAATTCGATTAATTCAATG+TGG | + | tig0024470:61596-61615 | Msa1417380:intron | 20.0% |
| !! | ATTTACTGATGAATAAAATG+AGG | + | tig0024470:61882-61901 | Msa1417380:intron | 20.0% |
| !! | AACTTATGATGTGAAATTTA+GGG | + | tig0024470:62509-62528 | Msa1417380:intron | 20.0% |
| !! | AGAAAAATAACAATGATGAA+AGG | - | tig0024470:62835-62854 | None:intergenic | 20.0% |
| !! | GCAGATACAAAAAATATATT+TGG | - | tig0024470:63478-63497 | None:intergenic | 20.0% |
| ! | AATGTGAATGTGAGAATATT+TGG | + | tig0024470:56503-56522 | Msa1417380:five_prime_UTR | 25.0% |
| ! | GATACATGAAAAAAAGTCAA+AGG | - | tig0024470:56653-56672 | None:intergenic | 25.0% |
| !!! | TTGACTTTTTTTCATGTATC+AGG | + | tig0024470:56653-56672 | Msa1417380:intron | 25.0% |
| ! | ATGAATGATTATCTGAATTC+TGG | - | tig0024470:56708-56727 | None:intergenic | 25.0% |
| !!! | CAAAAGAGTATCACAAAAAT+TGG | - | tig0024470:56839-56858 | None:intergenic | 25.0% |
| !!! | GACTTTATTTTATCTGTTGT+AGG | + | tig0024470:56961-56980 | Msa1417380:intron | 25.0% |
| !! | CATCAATTGGTTTATTTGAA+TGG | + | tig0024470:57279-57298 | Msa1417380:intron | 25.0% |
| ! | GGTTTATTTGAATGGAATTA+TGG | + | tig0024470:57287-57306 | Msa1417380:intron | 25.0% |
| ! | TATAGTAAAGAAATCAATGC+AGG | - | tig0024470:57406-57425 | None:intergenic | 25.0% |
| ! | GATAATAGGCATTATCTTTA+TGG | - | tig0024470:57520-57539 | None:intergenic | 25.0% |
| !! | TCCAAGTCTTTATTGATAAT+AGG | - | tig0024470:57534-57553 | None:intergenic | 25.0% |
| ! | AGACATTCATTCAATCTAAA+AGG | - | tig0024470:57660-57679 | None:intergenic | 25.0% |
| !!! | CTATTAGTTTTGCAAATTTC+TGG | + | tig0024470:57728-57747 | Msa1417380:intron | 25.0% |
| ! | CAATAATGAATGTCATAATG+AGG | - | tig0024470:58058-58077 | None:intergenic | 25.0% |
| ! | CTCATTATGACATTCATTAT+TGG | + | tig0024470:58056-58075 | Msa1417380:CDS | 25.0% |
| !! | AGAAGGTTTGTATTATTTCT+TGG | + | tig0024470:58095-58114 | Msa1417380:intron | 25.0% |
| ! | TTAAAAATCTTTCTCTTCAG+TGG | + | tig0024470:58667-58686 | Msa1417380:CDS | 25.0% |
| ! | TATATCAAGGATAATAAGCA+TGG | + | tig0024470:58739-58758 | Msa1417380:CDS | 25.0% |
| !!! | ACAAATATAAGCTCTAAAAG+AGG | - | tig0024470:58838-58857 | None:intergenic | 25.0% |
| !!! | GAGCTTATATTTGTTTTATG+AGG | + | tig0024470:58844-58863 | Msa1417380:intron | 25.0% |
| ! | ATAACAATTATTGTAGAGGA+TGG | + | tig0024470:58895-58914 | Msa1417380:intron | 25.0% |
| ! | TTGAAATAAGAGGAATAAAG+TGG | - | tig0024470:59107-59126 | None:intergenic | 25.0% |
| !!! | GTGATAATGAAATTTTTGTG+TGG | + | tig0024470:59270-59289 | Msa1417380:CDS | 25.0% |
| !! | TAATGAAATTTTTGTGTGGA+TGG | + | tig0024470:59274-59293 | Msa1417380:CDS | 25.0% |
| !! | AATGAAATTTTTGTGTGGAT+GGG | + | tig0024470:59275-59294 | Msa1417380:CDS | 25.0% |
| !!! | TTTTTTAGTCAGTTAACAGT+TGG | - | tig0024470:59977-59996 | None:intergenic | 25.0% |
| ! | TAACTGACTAAAAAAACTTC+AGG | + | tig0024470:59982-60001 | Msa1417380:intron | 25.0% |
| !!! | ACTTGATAACTTTTAACACA+AGG | + | tig0024470:60292-60311 | Msa1417380:intron | 25.0% |
| ! | TGCAAATTGAATAAATAGTG+AGG | - | tig0024470:60607-60626 | None:intergenic | 25.0% |
| ! | TATCTAGATGATATCTTCAT+AGG | + | tig0024470:61195-61214 | Msa1417380:intron | 25.0% |
| !! | ATTTTCAATGCAAACAAATG+TGG | - | tig0024470:61383-61402 | None:intergenic | 25.0% |
| ! | TTTGCATTGAAAATAACCAA+AGG | + | tig0024470:61389-61408 | Msa1417380:CDS | 25.0% |
| !!! | AAGATTGATTTTGTTACCTT+TGG | - | tig0024470:61408-61427 | None:intergenic | 25.0% |
| ! | AAAATAATCTAGATCTCACT+TGG | + | tig0024470:61434-61453 | Msa1417380:intron | 25.0% |
| ! | CCAAAGAGAGATTTATATTT+GGG | + | tig0024470:61703-61722 | Msa1417380:CDS | 25.0% |
| ! | CAGTAAATTAGTTATGAAGA+TGG | - | tig0024470:61870-61889 | None:intergenic | 25.0% |
| !! | TTTCAATGTAGTATGGATTA+TGG | + | tig0024470:61919-61938 | Msa1417380:intron | 25.0% |
| ! | ACTCATTCTTTGCTAAAATA+TGG | + | tig0024470:61942-61961 | Msa1417380:intron | 25.0% |
| !! | TTGTCATAAGCAGAAATTTT+TGG | + | tig0024470:61982-62001 | Msa1417380:intron | 25.0% |
| !!! | TAAGCAGAAATTTTTGGAAA+TGG | + | tig0024470:61988-62007 | Msa1417380:intron | 25.0% |
| ! | CTTCCATTACAACATAAATA+GGG | - | tig0024470:62045-62064 | None:intergenic | 25.0% |
| !!! | ATGGTATTTTGATCATTGAT+CGG | - | tig0024470:62154-62173 | None:intergenic | 25.0% |
| !!! | CTTTTTAAAGTCAAGAATCA+TGG | - | tig0024470:62173-62192 | None:intergenic | 25.0% |
| ! | GTTAAGTATGTTGGATTAAA+TGG | + | tig0024470:62219-62238 | Msa1417380:intron | 25.0% |
| !!! | CACATCATAAGTTGATAAAA+AGG | - | tig0024470:62502-62521 | None:intergenic | 25.0% |
| ! | CAACTTATGATGTGAAATTT+AGG | + | tig0024470:62508-62527 | Msa1417380:intron | 25.0% |
| !! | CTAAACATTTTATCTAACCA+AGG | + | tig0024470:62772-62791 | Msa1417380:intron | 25.0% |
| ! | TGCACTATTATGATGAAATT+AGG | + | tig0024470:63122-63141 | Msa1417380:intron | 25.0% |
| !! | TATTGTGATGATATGCTTTT+GGG | + | tig0024470:63406-63425 | Msa1417380:three_prime_UTR | 25.0% |
| !!! | GGGCATTTGTTTTATTTTAA+GGG | - | tig0024470:63457-63476 | None:intergenic | 25.0% |
| !!! | TGGGCATTTGTTTTATTTTA+AGG | - | tig0024470:63458-63477 | None:intergenic | 25.0% |
| AAACTAAGAAGTAAGAGTGA+TGG | - | tig0024470:56552-56571 | None:intergenic | 30.0% | |
| ATCAGATCATAGTTATACCT+TGG | - | tig0024470:56602-56621 | None:intergenic | 30.0% | |
| CACAAAAATTGGAAGAAGAA+AGG | - | tig0024470:56828-56847 | None:intergenic | 30.0% | |
| CTAGGATAGCTTATGAAAAT+AGG | + | tig0024470:56914-56933 | Msa1417380:intron | 30.0% | |
| ATAAGCTGTTTATCCAAACA+AGG | + | tig0024470:57038-57057 | Msa1417380:intron | 30.0% | |
| TTAGTTAAATTCTTAGGCCT+AGG | + | tig0024470:57147-57166 | Msa1417380:intron | 30.0% | |
| !! | AATCAAGTGTTGCTTTAAGT+TGG | + | tig0024470:57481-57500 | Msa1417380:five_prime_UTR | 30.0% |
| GCCTATTATCAATAAAGACT+TGG | + | tig0024470:57530-57549 | Msa1417380:CDS | 30.0% | |
| ACTTAACTTTATGTTCTCAG+TGG | + | tig0024470:57820-57839 | Msa1417380:intron | 30.0% | |
| TGACATTTCATAGGTTTAAG+AGG | - | tig0024470:57976-57995 | None:intergenic | 30.0% | |
| CAAGATCAATGACATTTCAT+AGG | - | tig0024470:57985-58004 | None:intergenic | 30.0% | |
| ! | TTGAGCATTTTACATGTTCT+CGG | + | tig0024470:58002-58021 | Msa1417380:intron | 30.0% |
| AATGAATGTCATAATGAGGA+GGG | - | tig0024470:58054-58073 | None:intergenic | 30.0% | |
| TAATGAATGTCATAATGAGG+AGG | - | tig0024470:58055-58074 | None:intergenic | 30.0% | |
| TTATGACATTCATTATTGGC+TGG | + | tig0024470:58060-58079 | Msa1417380:CDS | 30.0% | |
| ! | TATGACATTCATTATTGGCT+GGG | + | tig0024470:58061-58080 | Msa1417380:CDS | 30.0% |
| ! | AAGCCTAAAAACTTTTCATG+CGG | - | tig0024470:58167-58186 | None:intergenic | 30.0% |
| GTTCAATATAGGGAAATTCA+AGG | + | tig0024470:58314-58333 | Msa1417380:CDS | 30.0% | |
| ATAGAAACTTCTGTGATTCT+TGG | - | tig0024470:58340-58359 | None:intergenic | 30.0% | |
| GTATTTATTCCAACCTATTG+TGG | - | tig0024470:58782-58801 | None:intergenic | 30.0% | |
| !! | TATAAGCTCTAAAAGAGGAT+GGG | - | tig0024470:58833-58852 | None:intergenic | 30.0% |
| !! | ATATAAGCTCTAAAAGAGGA+TGG | - | tig0024470:58834-58853 | None:intergenic | 30.0% |
| ! | CTCCAATTGTAAAGCTATTT+TGG | + | tig0024470:59016-59035 | Msa1417380:CDS | 30.0% |
| ! | CACCAAAATAGCTTTACAAT+TGG | - | tig0024470:59021-59040 | None:intergenic | 30.0% |
| !!! | ATTGTAAAGCTATTTTGGTG+AGG | + | tig0024470:59021-59040 | Msa1417380:intron | 30.0% |
| ! | ACTTTTGTTCCTTGATACTA+AGG | + | tig0024470:59132-59151 | Msa1417380:intron | 30.0% |
| ! | AGTAAGAGTTTCTTGTTTCT+CGG | + | tig0024470:59346-59365 | Msa1417380:intron | 30.0% |
| !! | CATTGTTGATTTATTGGAAC+AGG | - | tig0024470:59491-59510 | None:intergenic | 30.0% |
| !! | GACATGCATTGTTGATTTAT+TGG | - | tig0024470:59497-59516 | None:intergenic | 30.0% |
| AAATCCTAGTAAAATGGAGA+TGG | - | tig0024470:59563-59582 | None:intergenic | 30.0% | |
| CTGACAAAATCCTAGTAAAA+TGG | - | tig0024470:59569-59588 | None:intergenic | 30.0% | |
| ! | TAGGATTTTGTCAGAAATGA+AGG | + | tig0024470:59575-59594 | Msa1417380:intron | 30.0% |
| ! | CATACGACATTTTTATCAGA+AGG | + | tig0024470:59614-59633 | Msa1417380:CDS | 30.0% |
| ! | GACATTTTTATCAGAAGGAT+TGG | + | tig0024470:59619-59638 | Msa1417380:CDS | 30.0% |
| GGCATAAGAAAATATGATCA+TGG | - | tig0024470:59950-59969 | None:intergenic | 30.0% | |
| ! | GACTAAAAAAACTTCAGGTT+TGG | + | tig0024470:59987-60006 | Msa1417380:intron | 30.0% |
| GAGACAAAACCATAGAAAAA+GGG | - | tig0024470:60320-60339 | None:intergenic | 30.0% | |
| TGAGACAAAACCATAGAAAA+AGG | - | tig0024470:60321-60340 | None:intergenic | 30.0% | |
| ATCTAGAAGTAATCCAGTTA+TGG | + | tig0024470:60391-60410 | Msa1417380:CDS | 30.0% | |
| AAACAGAAACTAACCATAAC+TGG | - | tig0024470:60407-60426 | None:intergenic | 30.0% | |
| TTATCTTGTCAACAATTGCT+AGG | + | tig0024470:60518-60537 | Msa1417380:intron | 30.0% | |
| ! | AGTTTTTCTCAATACTCCAA+AGG | + | tig0024470:60674-60693 | Msa1417380:CDS | 30.0% |
| CCTTGAATATGATTAACCTT+TGG | - | tig0024470:60693-60712 | None:intergenic | 30.0% | |
| CCAAAGGTTAATCATATTCA+AGG | + | tig0024470:60690-60709 | Msa1417380:CDS | 30.0% | |
| CTCACTATGATCTCATTATA+AGG | + | tig0024470:60719-60738 | Msa1417380:intron | 30.0% | |
| ! | AAGAAGCGTATAGAAGAAAA+CGG | + | tig0024470:60823-60842 | Msa1417380:CDS | 30.0% |
| TAAACCATACTTGATCAACT+TGG | - | tig0024470:60930-60949 | None:intergenic | 30.0% | |
| AGTTTGCAGAATATAGCAAT+AGG | - | tig0024470:61055-61074 | None:intergenic | 30.0% | |
| TCATACTCTTCTTGATAGAA+TGG | + | tig0024470:61122-61141 | Msa1417380:CDS | 30.0% | |
| ! | GAATGAACCTGATATTTTCT+GGG | + | tig0024470:61295-61314 | Msa1417380:CDS | 30.0% |
| ! | ACTTGGTTTAGAATTATCGT+CGG | + | tig0024470:61451-61470 | Msa1417380:intron | 30.0% |
| TGTTTCTCACGCAAATTTAT+TGG | + | tig0024470:61501-61520 | Msa1417380:intron | 30.0% | |
| ATTTATTGGAACTTCAACTC+AGG | + | tig0024470:61515-61534 | Msa1417380:intron | 30.0% | |
| TCACCTGAAATATTACATCA+AGG | - | tig0024470:61622-61641 | None:intergenic | 30.0% | |
| AGAGATATACAATTATACGC+AGG | + | tig0024470:61643-61662 | Msa1417380:CDS | 30.0% | |
| GCCAAAGAGAGATTTATATT+TGG | + | tig0024470:61702-61721 | Msa1417380:CDS | 30.0% | |
| CCCAAATATAAATCTCTCTT+TGG | - | tig0024470:61706-61725 | None:intergenic | 30.0% | |
| AGAGAGATTTATATTTGGGT+TGG | + | tig0024470:61707-61726 | Msa1417380:CDS | 30.0% | |
| ATGCAAGTTTCAATGTAGTA+TGG | + | tig0024470:61912-61931 | Msa1417380:intron | 30.0% | |
| ! | AAAATATGGTTTTCTTCCCA+TGG | + | tig0024470:61956-61975 | Msa1417380:intron | 30.0% |
| AGTCCCTATTTATGTTGTAA+TGG | + | tig0024470:62039-62058 | Msa1417380:CDS | 30.0% | |
| CCTTCCATTACAACATAAAT+AGG | - | tig0024470:62046-62065 | None:intergenic | 30.0% | |
| ! | CCTATTTATGTTGTAATGGA+AGG | + | tig0024470:62043-62062 | Msa1417380:CDS | 30.0% |
| GAAAAGAAACGAGTGAAAAA+TGG | - | tig0024470:62079-62098 | None:intergenic | 30.0% | |
| TCGGTATTTATAACTTCGAA+CGG | - | tig0024470:62135-62154 | None:intergenic | 30.0% | |
| ATCCATCTTGTTAAGTATGT+TGG | + | tig0024470:62210-62229 | Msa1417380:intron | 30.0% | |
| ATCCAACATACTTAACAAGA+TGG | - | tig0024470:62215-62234 | None:intergenic | 30.0% | |
| ATGGTATTGTTGCAGATTAT+TGG | + | tig0024470:62238-62257 | Msa1417380:intron | 30.0% | |
| TAAGCTAAAACAGCTTATGA+TGG | - | tig0024470:62626-62645 | None:intergenic | 30.0% | |
| CATCAATTTAACCAAAAGAG+AGG | + | tig0024470:63030-63049 | Msa1417380:CDS | 30.0% | |
| ! | TTAAGGAATTACCTCTCTTT+TGG | - | tig0024470:63044-63063 | None:intergenic | 30.0% |
| CTGCTAGGTTTATTTAGTTA+AGG | - | tig0024470:63061-63080 | None:intergenic | 30.0% | |
| ! | AATTTTTCATGGAACTCTTC+AGG | - | tig0024470:63159-63178 | None:intergenic | 30.0% |
| GAAGAGTTCCATGAAAAATT+TGG | + | tig0024470:63159-63178 | Msa1417380:CDS | 30.0% | |
| ! | TTGGCATTCCAAATTTTTCA+TGG | - | tig0024470:63170-63189 | None:intergenic | 30.0% |
| ! | AGTTTGTAGAAAGCAGATTT+TGG | - | tig0024470:63189-63208 | None:intergenic | 30.0% |
| ! | CTATTGTGATGATATGCTTT+TGG | + | tig0024470:63405-63424 | Msa1417380:three_prime_UTR | 30.0% |
| ! | ATTGTGATGATATGCTTTTG+GGG | + | tig0024470:63407-63426 | Msa1417380:three_prime_UTR | 30.0% |
| ACCATTCTTGCTTTACTATG+TGG | + | tig0024470:56478-56497 | Msa1417380:five_prime_UTR | 35.0% | |
| GACTCAAAAAAGTTGCTTCA+AGG | - | tig0024470:56778-56797 | None:intergenic | 35.0% | |
| ! | AGCTATTTCATAAGCTCTCT+AGG | + | tig0024470:56896-56915 | Msa1417380:intron | 35.0% |
| !! | AATATCTACATGGCCTTGTT+TGG | - | tig0024470:57054-57073 | None:intergenic | 35.0% |
| ATGACAGAACTGTCATCAAT+TGG | + | tig0024470:57266-57285 | Msa1417380:intron | 35.0% | |
| ! | GTATTTTACAGTCAAGTAGC+TGG | + | tig0024470:57314-57333 | Msa1417380:intron | 35.0% |
| TATTCTGCAATCCAGGATTA+AGG | - | tig0024470:57462-57481 | None:intergenic | 35.0% | |
| ACTTGATTATTCTGCAATCC+AGG | - | tig0024470:57469-57488 | None:intergenic | 35.0% | |
| AATTGCCTTACAAGTTGTGT+CGG | + | tig0024470:57609-57628 | Msa1417380:intron | 35.0% | |
| ACTTTATGTTCTCAGTGGAT+TGG | + | tig0024470:57825-57844 | Msa1417380:intron | 35.0% | |
| ATAGGTTTAAGAGGATCAAC+AGG | - | tig0024470:57967-57986 | None:intergenic | 35.0% | |
| ! | TTTTACATGTTCTCGGAAAC+AGG | + | tig0024470:58009-58028 | Msa1417380:intron | 35.0% |
| TTGGTTTACTATCTTGCTTG+CGG | + | tig0024470:58114-58133 | Msa1417380:intron | 35.0% | |
| ! | TCTCCGCATGAAAAGTTTTT+AGG | + | tig0024470:58161-58180 | Msa1417380:intron | 35.0% |
| CCTTCAATCGGTATTAAACA+AGG | - | tig0024470:58374-58393 | None:intergenic | 35.0% | |
| ! | CCTTGTTTAATACCGATTGA+AGG | + | tig0024470:58371-58390 | Msa1417380:CDS | 35.0% |
| GAAGTAAACACTCCTTCAAT+CGG | - | tig0024470:58386-58405 | None:intergenic | 35.0% | |
| GAGTGTTTACTTCAAAGCAA+GGG | + | tig0024470:58393-58412 | Msa1417380:CDS | 35.0% | |
| TCAAAGCAAGGGAATTTGAA+TGG | + | tig0024470:58404-58423 | Msa1417380:CDS | 35.0% | |
| ! | TTTGTTAGGTTCCTTTTCTG+AGG | + | tig0024470:58602-58621 | Msa1417380:intron | 35.0% |
| TTCAATGATGACCTCAGAAA+AGG | - | tig0024470:58616-58635 | None:intergenic | 35.0% | |
| GGAGGTTGTTCAATATATCA+AGG | + | tig0024470:58726-58745 | Msa1417380:CDS | 35.0% | |
| ATCAAGGATAATAAGCATGG+TGG | + | tig0024470:58742-58761 | Msa1417380:CDS | 35.0% | |
| !! | ATAAGCTCTAAAAGAGGATG+GGG | - | tig0024470:58832-58851 | None:intergenic | 35.0% |
| GTAGAGGATGGAAAATTTGT+TGG | + | tig0024470:58907-58926 | Msa1417380:intron | 35.0% | |
| AAGAGGAATAAAGTGGAACA+AGG | - | tig0024470:59100-59119 | None:intergenic | 35.0% | |
| CAGGGAAAACTTTGTTCAAT+TGG | + | tig0024470:59191-59210 | Msa1417380:CDS | 35.0% | |
| TACATTCAGCAAAGAAATGC+TGG | + | tig0024470:59220-59239 | Msa1417380:CDS | 35.0% | |
| ! | AAATTTTTGTGTGGATGGGA+AGG | + | tig0024470:59279-59298 | Msa1417380:CDS | 35.0% |
| TGTTCTTCTTTCGGTCAATA+AGG | - | tig0024470:59309-59328 | None:intergenic | 35.0% | |
| TTTGATCGCTGTTCTTCTTT+CGG | - | tig0024470:59318-59337 | None:intergenic | 35.0% | |
| AAATCCCTTAATGCATAGCT+TGG | - | tig0024470:59526-59545 | None:intergenic | 35.0% | |
| TTCGGTCACACTTTACTAAT+TGG | + | tig0024470:59654-59673 | Msa1417380:CDS | 35.0% | |
| ATAACCCTGATGCTTGAATA+TGG | - | tig0024470:59823-59842 | None:intergenic | 35.0% | |
| AGTCAGTTAACAGTTGGAAT+AGG | - | tig0024470:59971-59990 | None:intergenic | 35.0% | |
| ! | ACTGTAAAGTCTTGTGTGTT+CGG | - | tig0024470:60050-60069 | None:intergenic | 35.0% |
| CAGTATACATTTCCAGGAAA+TGG | + | tig0024470:60088-60107 | Msa1417380:CDS | 35.0% | |
| ATACATTTCCAGGAAATGGA+AGG | + | tig0024470:60092-60111 | Msa1417380:CDS | 35.0% | |
| TACATTTCCAGGAAATGGAA+GGG | + | tig0024470:60093-60112 | Msa1417380:CDS | 35.0% | |
| ! | ACGAAACACTGTTTTATGCT+TGG | + | tig0024470:60116-60135 | Msa1417380:CDS | 35.0% |
| ! | AAAGTTTTCTGTCTTCTGCT+GGG | + | tig0024470:60173-60192 | Msa1417380:intron | 35.0% |
| !!! | TTTCTATGGTTTTGTCTCAC+AGG | + | tig0024470:60322-60341 | Msa1417380:intron | 35.0% |
| !! | CATAGTATTGATGTGGGAAA+TGG | - | tig0024470:60363-60382 | None:intergenic | 35.0% |
| CATTTCCCACATCAATACTA+TGG | + | tig0024470:60361-60380 | Msa1417380:CDS | 35.0% | |
| !! | ATCAGCCATAGTATTGATGT+GGG | - | tig0024470:60369-60388 | None:intergenic | 35.0% |
| !! | AATCAGCCATAGTATTGATG+TGG | - | tig0024470:60370-60389 | None:intergenic | 35.0% |
| ! | AGTATTGAGAAAAACTGAGG+TGG | - | tig0024470:60670-60689 | None:intergenic | 35.0% |
| !! | TGGAGTATTGAGAAAAACTG+AGG | - | tig0024470:60673-60692 | None:intergenic | 35.0% |
| TGAAACTCACAATGAAAACC+TGG | + | tig0024470:60855-60874 | Msa1417380:CDS | 35.0% | |
| TACAAGTCCAGATAATATGC+AGG | + | tig0024470:60900-60919 | Msa1417380:CDS | 35.0% | |
| TATGATCTCTTGCTGAAGAA+AGG | - | tig0024470:61107-61126 | None:intergenic | 35.0% | |
| TACTCTTCTTGATAGAATGG+TGG | + | tig0024470:61125-61144 | Msa1417380:CDS | 35.0% | |
| ! | GGAATGAACCTGATATTTTC+TGG | + | tig0024470:61294-61313 | Msa1417380:CDS | 35.0% |
| ! | CCTTGAATCTCCTTTTCTTT+TGG | - | tig0024470:61347-61366 | None:intergenic | 35.0% |
| CCAAAAGAAAAGGAGATTCA+AGG | + | tig0024470:61344-61363 | Msa1417380:CDS | 35.0% | |
| ! | TGGCCTTGATGTAATATTTC+AGG | + | tig0024470:61616-61635 | Msa1417380:intron | 35.0% |
| !! | TATTTGGGTTGGATTGCATT+CGG | + | tig0024470:61718-61737 | Msa1417380:CDS | 35.0% |
| ! | TTGAATAATGGAGACAGAAC+TGG | - | tig0024470:61824-61843 | None:intergenic | 35.0% |
| CTGCTTATGACAATTTCCAT+GGG | - | tig0024470:61975-61994 | None:intergenic | 35.0% | |
| TCTGCTTATGACAATTTCCA+TGG | - | tig0024470:61976-61995 | None:intergenic | 35.0% | |
| AAGAAACGAGTGAAAAATGG+CGG | - | tig0024470:62076-62095 | None:intergenic | 35.0% | |
| ! | TTTTCACTCGTTTCTTTTCG+TGG | + | tig0024470:62080-62099 | Msa1417380:CDS | 35.0% |
| ! | TTTCACTCGTTTCTTTTCGT+GGG | + | tig0024470:62081-62100 | Msa1417380:CDS | 35.0% |
| AGAAAGCTTGCAATTCTGAA+AGG | + | tig0024470:62274-62293 | Msa1417380:CDS | 35.0% | |
| ! | AATTCTGAAAGGAAACTCCA+GGG | + | tig0024470:62285-62304 | Msa1417380:CDS | 35.0% |
| ACTATAGGCAATTAGGCAAT+CGG | + | tig0024470:62398-62417 | Msa1417380:CDS | 35.0% | |
| AGATTCTTCAAAGAGCTTCT+TGG | - | tig0024470:62449-62468 | None:intergenic | 35.0% | |
| ! | TGTGAAATTTAGGGTCTGTT+TGG | + | tig0024470:62518-62537 | Msa1417380:intron | 35.0% |
| TCACAAGTGTTTATGCTAGT+TGG | - | tig0024470:62563-62582 | None:intergenic | 35.0% | |
| TAAACACTTGTGAGACTGTT+TGG | + | tig0024470:62570-62589 | Msa1417380:intron | 35.0% | |
| !! | GTTGTTTTCGTAAGCTATCT+CGG | - | tig0024470:62663-62682 | None:intergenic | 35.0% |
| ATAAGCACTTACATGATACG+TGG | + | tig0024470:62745-62764 | Msa1417380:intron | 35.0% | |
| ! | TTTTATCTAACCAAGGACTC+TGG | + | tig0024470:62779-62798 | Msa1417380:intron | 35.0% |
| TGTTTGTTCTGCGGAAAAAA+TGG | - | tig0024470:62861-62880 | None:intergenic | 35.0% | |
| TAAACTTGCAGTCTCATTTG+AGG | - | tig0024470:62921-62940 | None:intergenic | 35.0% | |
| ATGCAAGAAAAATGACTGCT+AGG | - | tig0024470:63076-63095 | None:intergenic | 35.0% | |
| AGTGCAGATAACAACAGTTA+AGG | - | tig0024470:63108-63127 | None:intergenic | 35.0% | |
| !!! | GCTTGTTTTGTTTCCATCTA+GGG | - | tig0024470:63212-63231 | None:intergenic | 35.0% |
| !!! | AGCTTGTTTTGTTTCCATCT+AGG | - | tig0024470:63213-63232 | None:intergenic | 35.0% |
| !! | TGTCACTGGATCTATTTTAG+AGG | + | tig0024470:63238-63257 | Msa1417380:CDS | 35.0% |
| !! | ACTGGATCTATTTTAGAGGA+TGG | + | tig0024470:63242-63261 | Msa1417380:exon | 35.0% |
| ! | ACATATCTGCATGTGTTTTC+TGG | + | tig0024470:63275-63294 | Msa1417380:three_prime_UTR | 35.0% |
| ! | TTGTGATGATATGCTTTTGG+GGG | + | tig0024470:63408-63427 | Msa1417380:three_prime_UTR | 35.0% |
| GCCACATAGTAAAGCAAGAA+TGG | - | tig0024470:56482-56501 | None:intergenic | 40.0% | |
| GGTTCTACAGAAAACTGAGA+AGG | - | tig0024470:56581-56600 | None:intergenic | 40.0% | |
| ! | CTCAGTTTTCTGTAGAACCA+AGG | + | tig0024470:56582-56601 | Msa1417380:five_prime_UTR | 40.0% |
| ACTTGAGCAGCTTAATGCAT+AGG | + | tig0024470:57217-57236 | Msa1417380:intron | 40.0% | |
| GTTCTGTCATGACAACATGA+AGG | - | tig0024470:57256-57275 | None:intergenic | 40.0% | |
| AATCCAGGATTAAGGTTTGC+AGG | - | tig0024470:57454-57473 | None:intergenic | 40.0% | |
| !! | CAAGTGTTGCTTTAAGTTGG+CGG | + | tig0024470:57484-57503 | Msa1417380:five_prime_UTR | 40.0% |
| ATTGCCTTACAAGTTGTGTC+GGG | + | tig0024470:57610-57629 | Msa1417380:intron | 40.0% | |
| GGGCTAATTCAACTTGCATT+AGG | + | tig0024470:57630-57649 | Msa1417380:intron | 40.0% | |
| !! | TTCTCAGTGGATTGGAAGTT+TGG | + | tig0024470:57833-57852 | Msa1417380:intron | 40.0% |
| GTGTATTGAAAACCAGCAGT+TGG | + | tig0024470:57855-57874 | Msa1417380:CDS | 40.0% | |
| GACCTTCGAAAATTCTACAC+CGG | + | tig0024470:57895-57914 | Msa1417380:CDS | 40.0% | |
| ! | TTCCGGTGTAGAATTTTCGA+AGG | - | tig0024470:57900-57919 | None:intergenic | 40.0% |
| GAGAACTATGTATGCACTTC+CGG | - | tig0024470:57917-57936 | None:intergenic | 40.0% | |
| !!! | TAATGAGGAGGGCCATTTTT+GGG | - | tig0024470:58043-58062 | None:intergenic | 40.0% |
| !! | ATAATGAGGAGGGCCATTTT+TGG | - | tig0024470:58044-58063 | None:intergenic | 40.0% |
| CATGATCTCTAATGGCTGTA+GGG | - | tig0024470:58196-58215 | None:intergenic | 40.0% | |
| TCATGATCTCTAATGGCTGT+AGG | - | tig0024470:58197-58216 | None:intergenic | 40.0% | |
| ACCTGCAAATACATTACTCC+CGG | - | tig0024470:58233-58252 | None:intergenic | 40.0% | |
| ATCCTGCAGCGTTCAATATA+GGG | + | tig0024470:58304-58323 | Msa1417380:CDS | 40.0% | |
| ! | GGAGTGTTTACTTCAAAGCA+AGG | + | tig0024470:58392-58411 | Msa1417380:CDS | 40.0% |
| ATTCAGATAACGTGCAGAGA+CGG | - | tig0024470:58546-58565 | None:intergenic | 40.0% | |
| ACCATTCAAGAAAGAGCCAA+AGG | + | tig0024470:58700-58719 | Msa1417380:CDS | 40.0% | |
| !! | ACCTTTGGCTCTTTCTTGAA+TGG | - | tig0024470:58704-58723 | None:intergenic | 40.0% |
| TCAAGAAAGAGCCAAAGGTT+TGG | + | tig0024470:58705-58724 | Msa1417380:CDS | 40.0% | |
| TTGAACAACCTCCAAACCTT+TGG | - | tig0024470:58719-58738 | None:intergenic | 40.0% | |
| !! | TAAGCTCTAAAAGAGGATGG+GGG | - | tig0024470:58831-58850 | None:intergenic | 40.0% |
| TTTGTTGGCGATTCTGATGT+CGG | + | tig0024470:58922-58941 | Msa1417380:CDS | 40.0% | |
| !! | GGAGAGTTCTGGAGTTTATT+TGG | + | tig0024470:58943-58962 | Msa1417380:CDS | 40.0% |
| !! | GAGTTCTGGAGTTTATTTGG+TGG | + | tig0024470:58946-58965 | Msa1417380:CDS | 40.0% |
| ! | TAGCTTTACAATTGGAGCCA+CGG | - | tig0024470:59013-59032 | None:intergenic | 40.0% |
| GGAATAAAGTGGAACAAGGA+TGG | - | tig0024470:59096-59115 | None:intergenic | 40.0% | |
| TGTTCCTTGATACTAAGGAG+CGG | + | tig0024470:59137-59156 | Msa1417380:intron | 40.0% | |
| CTCGACAGGATAAATCTACA+GGG | + | tig0024470:59173-59192 | Msa1417380:intron | 40.0% | |
| ! | TTCTTGTTTCTCGGTCTGAA+CGG | + | tig0024470:59355-59374 | Msa1417380:intron | 40.0% |
| ! | ACTGCCATCTCCATTTTACT+AGG | + | tig0024470:59556-59575 | Msa1417380:intron | 40.0% |
| !! | GATTGGAAAGTGCCATCTTT+CGG | + | tig0024470:59636-59655 | Msa1417380:CDS | 40.0% |
| AGTAAAGTGTGACCGAAAGA+TGG | - | tig0024470:59651-59670 | None:intergenic | 40.0% | |
| ! | AGCCTAGTCTCAACTGTTTT+AGG | - | tig0024470:59680-59699 | None:intergenic | 40.0% |
| TCAGCCATATTCAAGCATCA+GGG | + | tig0024470:59816-59835 | Msa1417380:intron | 40.0% | |
| GTGTTCGGTAACTGAAAGAA+GGG | - | tig0024470:60035-60054 | None:intergenic | 40.0% | |
| TGTGTTCGGTAACTGAAAGA+AGG | - | tig0024470:60036-60055 | None:intergenic | 40.0% | |
| GAACACACAAGACTTTACAG+TGG | + | tig0024470:60049-60068 | Msa1417380:CDS | 40.0% | |
| GTAGTGCAGTATACATTTCC+AGG | + | tig0024470:60082-60101 | Msa1417380:CDS | 40.0% | |
| ! | ACACTGTTTTATGCTTGGCT+TGG | + | tig0024470:60121-60140 | Msa1417380:CDS | 40.0% |
| ! | CAAAGTTTTCTGTCTTCTGC+TGG | + | tig0024470:60172-60191 | Msa1417380:intron | 40.0% |
| TGGATGAGATTGAGGTTATC+AGG | - | tig0024470:60246-60265 | None:intergenic | 40.0% | |
| TAACCTCAATCTCATCCAGT+TGG | + | tig0024470:60248-60267 | Msa1417380:intron | 40.0% | |
| AATCCAACTGGATGAGATTG+AGG | - | tig0024470:60254-60273 | None:intergenic | 40.0% | |
| TCAACTAAGCGTAATCCAAC+TGG | - | tig0024470:60266-60285 | None:intergenic | 40.0% | |
| ! | CACAAGGTTCCCTTTTTCTA+TGG | + | tig0024470:60308-60327 | Msa1417380:intron | 40.0% |
| ! | TTTGCATTACACGCGTTTTC+AGG | + | tig0024470:60621-60640 | Msa1417380:intron | 40.0% |
| !! | TTTTCAGGCTCAAATTCACG+AGG | + | tig0024470:60636-60655 | Msa1417380:intron | 40.0% |
| TTTCAGGCTCAAATTCACGA+GGG | + | tig0024470:60637-60656 | Msa1417380:intron | 40.0% | |
| TTTAAGGGGGGAAATAGTTC+AGG | + | tig0024470:60796-60815 | Msa1417380:intron | 40.0% | |
| GCGTATAGAAGAAAACGGTA+CGG | + | tig0024470:60828-60847 | Msa1417380:CDS | 40.0% | |
| TATAGAAGAAAACGGTACGG+TGG | + | tig0024470:60831-60850 | Msa1417380:CDS | 40.0% | |
| CCATACTTGATCAACTTGGA+TGG | - | tig0024470:60926-60945 | None:intergenic | 40.0% | |
| !! | CCATCCAAGTTGATCAAGTA+TGG | + | tig0024470:60923-60942 | Msa1417380:intron | 40.0% |
| CTGAAGCAGCTATGTATACA+TGG | + | tig0024470:61073-61092 | Msa1417380:CDS | 40.0% | |
| GCAGCTATGTATACATGGAT+TGG | + | tig0024470:61078-61097 | Msa1417380:CDS | 40.0% | |
| AGAACGTCCCAGAAAATATC+AGG | - | tig0024470:61305-61324 | None:intergenic | 40.0% | |
| !!! | GATATTTTCTGGGACGTTCT+TGG | + | tig0024470:61305-61324 | Msa1417380:CDS | 40.0% |
| GGCGGAATATCCAAAAGAAA+AGG | + | tig0024470:61334-61353 | Msa1417380:CDS | 40.0% | |
| ATTATCGTCGGTGAAATGAC+AGG | + | tig0024470:61463-61482 | Msa1417380:intron | 40.0% | |
| TTATCGTCGGTGAAATGACA+GGG | + | tig0024470:61464-61483 | Msa1417380:intron | 40.0% | |
| GAAATGACAGGGAAAACTGA+TGG | + | tig0024470:61475-61494 | Msa1417380:intron | 40.0% | |
| AAACAAGAAGCTCTCAACCT+CGG | + | tig0024470:61752-61771 | Msa1417380:CDS | 40.0% | |
| GAAATGGATGTCCTTGTTGA+AGG | + | tig0024470:62004-62023 | Msa1417380:CDS | 40.0% | |
| ! | CAATTCTGAAAGGAAACTCC+AGG | + | tig0024470:62284-62303 | Msa1417380:CDS | 40.0% |
| AGCGGTTCTATCATTTCCAA+TGG | + | tig0024470:62331-62350 | Msa1417380:CDS | 40.0% | |
| TTACCAGCACTGTTATTAGC+AGG | - | tig0024470:62472-62491 | None:intergenic | 40.0% | |
| CAGTGGAATTGTTTGTTCTG+CGG | - | tig0024470:62870-62889 | None:intergenic | 40.0% | |
| CAGTTCTGTTGCTGAAGAAT+CGG | - | tig0024470:62894-62913 | None:intergenic | 40.0% | |
| GTTAAATTGATGCCTGTCAC+TGG | - | tig0024470:63022-63041 | None:intergenic | 40.0% | |
| CTTTCTACAAACTCCCTAGA+TGG | + | tig0024470:63196-63215 | Msa1417380:CDS | 40.0% | |
| AAACAAGCTGAAGATGTCAC+TGG | + | tig0024470:63224-63243 | Msa1417380:CDS | 40.0% | |
| GCATGCATAATACACTCACA+AGG | - | tig0024470:63343-63362 | None:intergenic | 40.0% | |
| TAGCCTGCAAACCTTAATCC+TGG | + | tig0024470:57448-57467 | Msa1417380:intron | 45.0% | |
| TTAGCCCGACACAACTTGTA+AGG | - | tig0024470:57617-57636 | None:intergenic | 45.0% | |
| TACATGTTCTCGGAAACAGG+CGG | + | tig0024470:58012-58031 | Msa1417380:intron | 45.0% | |
| ! | CAGGCGGTTTTTCCCAAAAA+TGG | + | tig0024470:58028-58047 | Msa1417380:intron | 45.0% |
| GCTGGGAAATGACACAAAGA+AGG | + | tig0024470:58078-58097 | Msa1417380:CDS | 45.0% | |
| GTGCGGATCATGATCTCTAA+TGG | - | tig0024470:58204-58223 | None:intergenic | 45.0% | |
| ! | TCATGATCCGCACTTTTCAC+CGG | + | tig0024470:58211-58230 | Msa1417380:intron | 45.0% |
| ATTACTCCCGGTGAAAAGTG+CGG | - | tig0024470:58221-58240 | None:intergenic | 45.0% | |
| ACCGGGAGTAATGTATTTGC+AGG | + | tig0024470:58229-58248 | Msa1417380:intron | 45.0% | |
| GGGAGTAATGTATTTGCAGG+TGG | + | tig0024470:58232-58251 | Msa1417380:intron | 45.0% | |
| ! | TTTGCAGGTGGATTCAAGCT+TGG | + | tig0024470:58244-58263 | Msa1417380:intron | 45.0% |
| TTCAAGCTTGGCATCAGACA+AGG | + | tig0024470:58256-58275 | Msa1417380:CDS | 45.0% | |
| ! | ATCAGACAAGGCACTTGAGT+TGG | + | tig0024470:58268-58287 | Msa1417380:CDS | 45.0% |
| GATCCTGCAGCGTTCAATAT+AGG | + | tig0024470:58303-58322 | Msa1417380:CDS | 45.0% | |
| TTCCCTATATTGAACGCTGC+AGG | - | tig0024470:58309-58328 | None:intergenic | 45.0% | |
| TACATGTGTACAGGCTGACT+TGG | - | tig0024470:58436-58455 | None:intergenic | 45.0% | |
| AGTCAGCCTGTACACATGTA+AGG | + | tig0024470:58436-58455 | Msa1417380:CDS | 45.0% | |
| GTCAGCCTGTACACATGTAA+GGG | + | tig0024470:58437-58456 | Msa1417380:CDS | 45.0% | |
| AGTCTCCCTTACATGTGTAC+AGG | - | tig0024470:58445-58464 | None:intergenic | 45.0% | |
| CTATGTTGTCCACGTGAAAG+AGG | + | tig0024470:58463-58482 | Msa1417380:CDS | 45.0% | |
| TTCAGATAACGTGCAGAGAC+GGG | - | tig0024470:58545-58564 | None:intergenic | 45.0% | |
| AGAAAGAGCCAAAGGTTTGG+AGG | + | tig0024470:58708-58727 | Msa1417380:CDS | 45.0% | |
| ! | TAAGCATGGTGGAAAATGCG+AGG | + | tig0024470:58753-58772 | Msa1417380:CDS | 45.0% |
| !! | AAGCTCTAAAAGAGGATGGG+GGG | - | tig0024470:58830-58849 | None:intergenic | 45.0% |
| ATTCTGATGTCGGAGAGTTC+TGG | + | tig0024470:58932-58951 | Msa1417380:CDS | 45.0% | |
| ACAACCGCTCCTTAGTATCA+AGG | - | tig0024470:59144-59163 | None:intergenic | 45.0% | |
| CCTGTAGATTTATCCTGTCG+AGG | - | tig0024470:59175-59194 | None:intergenic | 45.0% | |
| CCTCGACAGGATAAATCTAC+AGG | + | tig0024470:59172-59191 | Msa1417380:intron | 45.0% | |
| TCTCGCCAAGCTATGCATTA+AGG | + | tig0024470:59518-59537 | Msa1417380:intron | 45.0% | |
| CTCGCCAAGCTATGCATTAA+GGG | + | tig0024470:59519-59538 | Msa1417380:intron | 45.0% | |
| GGCCTAAAACAGTTGAGACT+AGG | + | tig0024470:59675-59694 | Msa1417380:CDS | 45.0% | |
| GAGACTAGGCTTTACGAAGA+AGG | + | tig0024470:59689-59708 | Msa1417380:CDS | 45.0% | |
| CGAAGAAGGACGAGAAAAAG+TGG | + | tig0024470:59703-59722 | Msa1417380:CDS | 45.0% | |
| GCTTGAATATGGCTGAGACA+GGG | - | tig0024470:59812-59831 | None:intergenic | 45.0% | |
| TGCTTGAATATGGCTGAGAC+AGG | - | tig0024470:59813-59832 | None:intergenic | 45.0% | |
| CTCAGCCATATTCAAGCATC+AGG | + | tig0024470:59815-59834 | Msa1417380:intron | 45.0% | |
| GAAAGAGCTTCCTGATGAAG+TGG | + | tig0024470:59848-59867 | Msa1417380:CDS | 45.0% | |
| GCTTGGCAGTAGATGTGTAA+TGG | + | tig0024470:60138-60157 | Msa1417380:CDS | 45.0% | |
| GGCAGTAGATGTGTAATGGT+AGG | + | tig0024470:60142-60161 | Msa1417380:intron | 45.0% | |
| !!! | CTATGGTTTTGTCTCACAGG+AGG | + | tig0024470:60325-60344 | Msa1417380:intron | 45.0% |
| !! | GTAGCACTGTTTCGAGTTCA+AGG | + | tig0024470:60877-60896 | Msa1417380:CDS | 45.0% |
| TGGATGGCCTGCATATTATC+TGG | - | tig0024470:60910-60929 | None:intergenic | 45.0% | |
| ACAGATACAGGTAGCTGTGT+CGG | - | tig0024470:61266-61285 | None:intergenic | 45.0% | |
| ACAGCTACCTGTATCTGTGA+GGG | + | tig0024470:61268-61287 | Msa1417380:CDS | 45.0% | |
| TACCTGTATCTGTGAGGGAA+GGG | + | tig0024470:61273-61292 | Msa1417380:CDS | 45.0% | |
| !!! | ATTTTCTGGGACGTTCTTGG+TGG | + | tig0024470:61308-61327 | Msa1417380:CDS | 45.0% |
| CTTCAACTCAGGAGACTTCA+AGG | + | tig0024470:61526-61545 | Msa1417380:intron | 45.0% | |
| GCAAACTTGATCGAAGAAGG+TGG | - | tig0024470:61802-61821 | None:intergenic | 45.0% | |
| CTGGCAAACTTGATCGAAGA+AGG | - | tig0024470:61805-61824 | None:intergenic | 45.0% | |
| CTAGCGATAAGCCTTCAACA+AGG | - | tig0024470:62018-62037 | None:intergenic | 45.0% | |
| !! | AACCGCTTTTGTGACCGTTA+GGG | - | tig0024470:62318-62337 | None:intergenic | 45.0% |
| GAGGTGAACTACTTCTTCGA+CGG | - | tig0024470:62357-62376 | None:intergenic | 45.0% | |
| GAAGTAGTTCACCTCTACCT+AGG | + | tig0024470:62362-62381 | Msa1417380:CDS | 45.0% | |
| GGCTCAGACTATAGGCAATT+AGG | + | tig0024470:62391-62410 | Msa1417380:CDS | 45.0% | |
| !!! | TTTTTCAAGCCCTACTCCAG+CGG | + | tig0024470:62423-62442 | Msa1417380:CDS | 45.0% |
| TCTCCTGCTAATAACAGTGC+TGG | + | tig0024470:62466-62485 | Msa1417380:CDS | 45.0% | |
| ! | ACTCTGGAGAGTTCGCTAAT+TGG | + | tig0024470:62795-62814 | Msa1417380:intron | 45.0% |
| TTGATGCCTGTCACTGGATT+CGG | - | tig0024470:63016-63035 | None:intergenic | 45.0% | |
| !!! | TAAAAAAATATCTTTTTTTA+AGG | + | tig0024470:60780-60799 | Msa1417380:intron | 5.0% |
| !!! | AAAAAAATATCTTTTTTTAA+GGG | + | tig0024470:60781-60800 | Msa1417380:intron | 5.0% |
| ! | CATGATCCGCACTTTTCACC+GGG | + | tig0024470:58212-58231 | Msa1417380:intron | 50.0% |
| !! | CTTGAGTTGGATGCAGCCTT+AGG | + | tig0024470:58281-58300 | Msa1417380:CDS | 50.0% |
| TTGAACGCTGCAGGATCCTA+AGG | - | tig0024470:58300-58319 | None:intergenic | 50.0% | |
| CACAACTCACCTCTTTCACG+TGG | - | tig0024470:58475-58494 | None:intergenic | 50.0% | |
| AAATGCGAGGTGGCCACAAT+AGG | + | tig0024470:58766-58785 | Msa1417380:CDS | 50.0% | |
| !! | AGCTCTAAAAGAGGATGGGG+GGG | - | tig0024470:58829-58848 | None:intergenic | 50.0% |
| ACGGATTCCTGACTAGAAGG+CGG | - | tig0024470:58994-59013 | None:intergenic | 50.0% | |
| ! | GTTGTTGTCACTTCCTCGAC+AGG | + | tig0024470:59159-59178 | Msa1417380:intron | 50.0% |
| GAAGGACGAGAAAAAGTGGC+AGG | + | tig0024470:59707-59726 | Msa1417380:CDS | 50.0% | |
| GGCTCATCATCCACTTCATC+AGG | - | tig0024470:59861-59880 | None:intergenic | 50.0% | |
| GAGCCATCTATAGATCGCAG+CGG | + | tig0024470:59876-59895 | Msa1417380:CDS | 50.0% | |
| GTTTCGTCCCTTCCATTTCC+TGG | - | tig0024470:60103-60122 | None:intergenic | 50.0% | |
| GGCTCAAATTCACGAGGGAA+AGG | + | tig0024470:60642-60661 | Msa1417380:intron | 50.0% | |
| GAACTCGAAACAGTGCTACC+AGG | - | tig0024470:60876-60895 | None:intergenic | 50.0% | |
| CACAGCTACCTGTATCTGTG+AGG | + | tig0024470:61267-61286 | Msa1417380:CDS | 50.0% | |
| CTACCTGTATCTGTGAGGGA+AGG | + | tig0024470:61272-61291 | Msa1417380:CDS | 50.0% | |
| TTCCCTTCCCTCACAGATAC+AGG | - | tig0024470:61278-61297 | None:intergenic | 50.0% | |
| ACCCCTAACGGTCACAAAAG+CGG | + | tig0024470:62313-62332 | Msa1417380:CDS | 50.0% | |
| !! | ACCGCTTTTGTGACCGTTAG+GGG | - | tig0024470:62317-62336 | None:intergenic | 50.0% |
| !! | GAACCGCTTTTGTGACCGTT+AGG | - | tig0024470:62319-62338 | None:intergenic | 50.0% |
| ACTACTTCTTCGACGGCCAT+TGG | - | tig0024470:62350-62369 | None:intergenic | 50.0% | |
| AAGCTATCTCGGAGAGCTTG+TGG | - | tig0024470:62652-62671 | None:intergenic | 50.0% | |
| GTTGCTGAAGAATCGGACAG+TGG | - | tig0024470:62887-62906 | None:intergenic | 50.0% | |
| CCACTCGAAGTTGCTCGTAA+GGG | - | tig0024470:62988-63007 | None:intergenic | 50.0% | |
| ACCACTCGAAGTTGCTCGTA+AGG | - | tig0024470:62989-63008 | None:intergenic | 50.0% | |
| GTTTCTCCGAATCCAGTGAC+AGG | + | tig0024470:63007-63026 | Msa1417380:CDS | 50.0% | |
| GATCCCGCATTCCAAACTGC+AGG | + | tig0024470:57552-57571 | Msa1417380:CDS | 55.0% | |
| ! | GCTCCTGCAGTTTGGAATGC+GGG | - | tig0024470:57558-57577 | None:intergenic | 55.0% |
| ! | CGCTCCTGCAGTTTGGAATG+CGG | - | tig0024470:57559-57578 | None:intergenic | 55.0% |
| ACGGATTCGCTCCTGCAGTT+TGG | - | tig0024470:57566-57585 | None:intergenic | 55.0% | |
| CTGACACTGGAACCAACTGC+TGG | - | tig0024470:57870-57889 | None:intergenic | 55.0% | |
| CGAAGGTCTGACTCTGACAC+TGG | - | tig0024470:57883-57902 | None:intergenic | 55.0% | |
| ! | GCATGGTGGAAAATGCGAGG+TGG | + | tig0024470:58756-58775 | Msa1417380:CDS | 55.0% |
| TCTAAAAGAGGATGGGGGGG+GGG | - | tig0024470:58826-58845 | None:intergenic | 55.0% | |
| ! | CTCTAAAAGAGGATGGGGGG+GGG | - | tig0024470:58827-58846 | None:intergenic | 55.0% |
| !! | GCTCTAAAAGAGGATGGGGG+GGG | - | tig0024470:58828-58847 | None:intergenic | 55.0% |
| CGGATTCCTGACTAGAAGGC+GGG | - | tig0024470:58993-59012 | None:intergenic | 55.0% | |
| GCCTTCTAGTCAGGAATCCG+TGG | + | tig0024470:58993-59012 | Msa1417380:CDS | 55.0% | |
| GCCACGGATTCCTGACTAGA+AGG | - | tig0024470:58997-59016 | None:intergenic | 55.0% | |
| ! | GTGCCGCTGCGATCTATAGA+TGG | - | tig0024470:59882-59901 | None:intergenic | 55.0% |
| ! | CTTCAGGTTTGGCGAGTCGA+TGG | + | tig0024470:59998-60017 | Msa1417380:intron | 55.0% |
| CTGGGACGTTCTTGGTGGAA+AGG | + | tig0024470:61313-61332 | Msa1417380:CDS | 55.0% | |
| GGACGTTCTTGGTGGAAAGG+CGG | + | tig0024470:61316-61335 | Msa1417380:CDS | 55.0% | |
| AGAAGCTCTCAACCTCGGCT+TGG | + | tig0024470:61757-61776 | Msa1417380:CDS | 55.0% | |
| GCAGACAACTTACCAAGCCG+AGG | - | tig0024470:61772-61791 | None:intergenic | 55.0% | |
| TCCAGGGACTCTACCCCTAA+CGG | + | tig0024470:62301-62320 | Msa1417380:CDS | 55.0% | |
| ! | TCACCTCTACCTAGGAGTGC+AGG | + | tig0024470:62370-62389 | Msa1417380:CDS | 55.0% |
| TAGTCTGAGCCTGCACTCCT+AGG | - | tig0024470:62382-62401 | None:intergenic | 55.0% | |
| GGAGTGCAGGCTCAGACTAT+AGG | + | tig0024470:62383-62402 | Msa1417380:CDS | 55.0% | |
| TCAAAGAGCTTCTTGGCCGC+TGG | - | tig0024470:62442-62461 | None:intergenic | 55.0% | |
| AGCGAACTCTCCAGAGTCCT+TGG | - | tig0024470:62792-62811 | None:intergenic | 55.0% | |
| CCCTTACGAGCAACTTCGAG+TGG | + | tig0024470:62985-63004 | Msa1417380:CDS | 55.0% | |
| GCGAGGTGGCCACAATAGGT+TGG | + | tig0024470:58770-58789 | Msa1417380:intron | 60.0% | |
| TAAAAGAGGATGGGGGGGGG+GGG | - | tig0024470:58824-58843 | None:intergenic | 60.0% | |
| CTAAAAGAGGATGGGGGGGG+GGG | - | tig0024470:58825-58844 | None:intergenic | 60.0% | |
| GAAGGCGGGTCTCGAGGAAT+TGG | - | tig0024470:58979-58998 | None:intergenic | 60.0% | |
| TGACTAGAAGGCGGGTCTCG+AGG | - | tig0024470:58985-59004 | None:intergenic | 60.0% | |
| TCGAGACCCGCCTTCTAGTC+AGG | + | tig0024470:58984-59003 | Msa1417380:CDS | 60.0% | |
| ACCGTTAGGGGTAGAGTCCC+TGG | - | tig0024470:62305-62324 | None:intergenic | 60.0% | |
| GAGCCTGCACTCCTAGGTAG+AGG | - | tig0024470:62376-62395 | None:intergenic | 60.0% | |
| GCTTCTTGGCCGCTGGAGTA+GGG | - | tig0024470:62435-62454 | None:intergenic | 60.0% | |
| AGCTTCTTGGCCGCTGGAGT+AGG | - | tig0024470:62436-62455 | None:intergenic | 60.0% | |
| AAAAGAGGATGGGGGGGGGG+GGG | - | tig0024470:58823-58842 | None:intergenic | 65.0% | |
| AAAGAGGATGGGGGGGGGGG+GGG | - | tig0024470:58822-58841 | None:intergenic | 70.0% | |
| AAGAGGATGGGGGGGGGGGG+GGG | - | tig0024470:58821-58840 | None:intergenic | 75.0% | |
| ! | AGAGGATGGGGGGGGGGGGG+GGG | - | tig0024470:58820-58839 | None:intergenic | 80.0% |
| ! | AGGATGGGGGGGGGGGGGGG+GGG | - | tig0024470:58818-58837 | None:intergenic | 85.0% |
| ! | GAGGATGGGGGGGGGGGGGG+GGG | - | tig0024470:58819-58838 | None:intergenic | 85.0% |
| ! | ATGGGGGGGGGGGGGGGGGG+GGG | - | tig0024470:58815-58834 | None:intergenic | 90.0% |
| ! | GATGGGGGGGGGGGGGGGGG+GGG | - | tig0024470:58816-58835 | None:intergenic | 90.0% |
| ! | GGATGGGGGGGGGGGGGGGG+GGG | - | tig0024470:58817-58836 | None:intergenic | 90.0% |
| ! | TGGGGGGGGGGGGGGGGGGG+GGG | - | tig0024470:58814-58833 | None:intergenic | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0024470 | gene | 56466 | 63569 | 56466 | ID=Msa1417380;Name=Msa1417380 |
| tig0024470 | mRNA | 56466 | 63569 | 56466 | ID=Msa1417380-mRNA-1;Parent=Msa1417380;Name=Msa1417380-mRNA-1;_AED=0.14;_eAED=0.14;_QI=188|1|1|1|0.95|0.95|22|312|894 |
| tig0024470 | exon | 56466 | 56603 | 56466 | ID=Msa1417380-mRNA-1:exon:23356;Parent=Msa1417380-mRNA-1 |
| tig0024470 | exon | 57478 | 57583 | 57478 | ID=Msa1417380-mRNA-1:exon:23357;Parent=Msa1417380-mRNA-1 |
| tig0024470 | exon | 57840 | 57939 | 57840 | ID=Msa1417380-mRNA-1:exon:23358;Parent=Msa1417380-mRNA-1 |
| tig0024470 | exon | 58031 | 58099 | 58031 | ID=Msa1417380-mRNA-1:exon:23359;Parent=Msa1417380-mRNA-1 |
| tig0024470 | exon | 58251 | 58484 | 58251 | ID=Msa1417380-mRNA-1:exon:23360;Parent=Msa1417380-mRNA-1 |
| tig0024470 | exon | 58610 | 58787 | 58610 | ID=Msa1417380-mRNA-1:exon:23361;Parent=Msa1417380-mRNA-1 |
| tig0024470 | exon | 58911 | 59037 | 58911 | ID=Msa1417380-mRNA-1:exon:23362;Parent=Msa1417380-mRNA-1 |
| tig0024470 | exon | 59181 | 59346 | 59181 | ID=Msa1417380-mRNA-1:exon:23363;Parent=Msa1417380-mRNA-1 |
| tig0024470 | exon | 59578 | 59728 | 59578 | ID=Msa1417380-mRNA-1:exon:23364;Parent=Msa1417380-mRNA-1 |
| tig0024470 | exon | 59820 | 59908 | 59820 | ID=Msa1417380-mRNA-1:exon:23365;Parent=Msa1417380-mRNA-1 |
| tig0024470 | exon | 60004 | 60159 | 60004 | ID=Msa1417380-mRNA-1:exon:23366;Parent=Msa1417380-mRNA-1 |
| tig0024470 | exon | 60344 | 60412 | 60344 | ID=Msa1417380-mRNA-1:exon:23367;Parent=Msa1417380-mRNA-1 |
| tig0024470 | exon | 60643 | 60711 | 60643 | ID=Msa1417380-mRNA-1:exon:23368;Parent=Msa1417380-mRNA-1 |
| tig0024470 | exon | 60802 | 60939 | 60802 | ID=Msa1417380-mRNA-1:exon:23369;Parent=Msa1417380-mRNA-1 |
| tig0024470 | exon | 61030 | 61158 | 61030 | ID=Msa1417380-mRNA-1:exon:23370;Parent=Msa1417380-mRNA-1 |
| tig0024470 | exon | 61263 | 61410 | 61263 | ID=Msa1417380-mRNA-1:exon:23371;Parent=Msa1417380-mRNA-1 |
| tig0024470 | exon | 61537 | 61547 | 61537 | ID=Msa1417380-mRNA-1:exon:23372;Parent=Msa1417380-mRNA-1 |
| tig0024470 | exon | 61638 | 61778 | 61638 | ID=Msa1417380-mRNA-1:exon:23373;Parent=Msa1417380-mRNA-1 |
| tig0024470 | exon | 61995 | 62120 | 61995 | ID=Msa1417380-mRNA-1:exon:23374;Parent=Msa1417380-mRNA-1 |
| tig0024470 | exon | 62253 | 62487 | 62253 | ID=Msa1417380-mRNA-1:exon:23375;Parent=Msa1417380-mRNA-1 |
| tig0024470 | exon | 62873 | 63051 | 62873 | ID=Msa1417380-mRNA-1:exon:23376;Parent=Msa1417380-mRNA-1 |
| tig0024470 | exon | 63144 | 63569 | 63144 | ID=Msa1417380-mRNA-1:exon:23377;Parent=Msa1417380-mRNA-1 |
| tig0024470 | five_prime_UTR | 56466 | 56603 | 56466 | ID=Msa1417380-mRNA-1:five_prime_utr;Parent=Msa1417380-mRNA-1 |
| tig0024470 | five_prime_UTR | 57478 | 57527 | 57478 | ID=Msa1417380-mRNA-1:five_prime_utr;Parent=Msa1417380-mRNA-1 |
| tig0024470 | CDS | 57528 | 57583 | 57528 | ID=Msa1417380-mRNA-1:cds;Parent=Msa1417380-mRNA-1 |
| tig0024470 | CDS | 57840 | 57939 | 57840 | ID=Msa1417380-mRNA-1:cds;Parent=Msa1417380-mRNA-1 |
| tig0024470 | CDS | 58031 | 58099 | 58031 | ID=Msa1417380-mRNA-1:cds;Parent=Msa1417380-mRNA-1 |
| tig0024470 | CDS | 58251 | 58484 | 58251 | ID=Msa1417380-mRNA-1:cds;Parent=Msa1417380-mRNA-1 |
| tig0024470 | CDS | 58610 | 58787 | 58610 | ID=Msa1417380-mRNA-1:cds;Parent=Msa1417380-mRNA-1 |
| tig0024470 | CDS | 58911 | 59037 | 58911 | ID=Msa1417380-mRNA-1:cds;Parent=Msa1417380-mRNA-1 |
| tig0024470 | CDS | 59181 | 59346 | 59181 | ID=Msa1417380-mRNA-1:cds;Parent=Msa1417380-mRNA-1 |
| tig0024470 | CDS | 59578 | 59728 | 59578 | ID=Msa1417380-mRNA-1:cds;Parent=Msa1417380-mRNA-1 |
| tig0024470 | CDS | 59820 | 59908 | 59820 | ID=Msa1417380-mRNA-1:cds;Parent=Msa1417380-mRNA-1 |
| tig0024470 | CDS | 60004 | 60159 | 60004 | ID=Msa1417380-mRNA-1:cds;Parent=Msa1417380-mRNA-1 |
| tig0024470 | CDS | 60344 | 60412 | 60344 | ID=Msa1417380-mRNA-1:cds;Parent=Msa1417380-mRNA-1 |
| tig0024470 | CDS | 60643 | 60711 | 60643 | ID=Msa1417380-mRNA-1:cds;Parent=Msa1417380-mRNA-1 |
| tig0024470 | CDS | 60802 | 60939 | 60802 | ID=Msa1417380-mRNA-1:cds;Parent=Msa1417380-mRNA-1 |
| tig0024470 | CDS | 61030 | 61158 | 61030 | ID=Msa1417380-mRNA-1:cds;Parent=Msa1417380-mRNA-1 |
| tig0024470 | CDS | 61263 | 61410 | 61263 | ID=Msa1417380-mRNA-1:cds;Parent=Msa1417380-mRNA-1 |
| tig0024470 | CDS | 61537 | 61547 | 61537 | ID=Msa1417380-mRNA-1:cds;Parent=Msa1417380-mRNA-1 |
| tig0024470 | CDS | 61638 | 61778 | 61638 | ID=Msa1417380-mRNA-1:cds;Parent=Msa1417380-mRNA-1 |
| tig0024470 | CDS | 61995 | 62120 | 61995 | ID=Msa1417380-mRNA-1:cds;Parent=Msa1417380-mRNA-1 |
| tig0024470 | CDS | 62253 | 62487 | 62253 | ID=Msa1417380-mRNA-1:cds;Parent=Msa1417380-mRNA-1 |
| tig0024470 | CDS | 62873 | 63051 | 62873 | ID=Msa1417380-mRNA-1:cds;Parent=Msa1417380-mRNA-1 |
| tig0024470 | CDS | 63144 | 63257 | 63144 | ID=Msa1417380-mRNA-1:cds;Parent=Msa1417380-mRNA-1 |
| tig0024470 | three_prime_UTR | 63258 | 63569 | 63258 | ID=Msa1417380-mRNA-1:three_prime_utr;Parent=Msa1417380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
