AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0792370

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0792370 MtrunA17_Chr1g0151961 95.630 389 6 4 1 388 1 379 0.0 760
Msa0792370 MtrunA17_Chr2g0289201 58.730 252 90 3 128 375 117 358 3.12e-89 274
Msa0792370 MtrunA17_Chr5g0413201 48.377 308 146 4 64 365 8 308 8.71e-86 263
Msa0792370 MtrunA17_Chr5g0439391 55.187 241 94 3 128 364 46 276 2.10e-71 225
Msa0792370 MtrunA17_Chr1g0192791 48.413 252 117 4 128 371 19 265 8.80e-70 220
Msa0792370 MtrunA17_Chr2g0305101 33.463 257 149 5 117 351 83 339 1.51e-37 139
Msa0792370 MtrunA17_Chr1g0149651 32.342 269 151 6 114 351 152 420 3.41e-35 134
Msa0792370 MtrunA17_Chr5g0398181 31.418 261 139 5 124 351 23 276 9.07e-34 127
Msa0792370 MtrunA17_Chr3g0137241 31.724 290 153 9 105 351 68 355 2.50e-33 127
Msa0792370 MtrunA17_Chr4g0065241 32.800 250 146 5 124 351 66 315 3.50e-33 127
Msa0792370 MtrunA17_Chr7g0240371 39.726 73 42 1 281 353 296 366 1.19e-11 66.2
Msa0792370 MtrunA17_Chr4g0008591 43.243 74 39 2 280 353 351 421 1.43e-11 65.9
Msa0792370 MtrunA17_Chr4g0025521 50.909 55 27 0 299 353 409 463 3.59e-11 65.1
Msa0792370 MtrunA17_Chr3g0141941 37.000 100 55 4 254 353 315 406 6.22e-11 63.9
Msa0792370 MtrunA17_Chr1g0155681 49.091 55 28 0 299 353 363 417 9.96e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0792370 AT4G08150.1 70.710 338 75 8 59 388 77 398 5.02e-155 442
Msa0792370 AT1G62360.1 57.037 270 105 3 104 367 95 359 1.06e-89 276
Msa0792370 AT1G23380.1 56.904 239 96 3 127 363 84 317 5.96e-85 261
Msa0792370 AT1G23380.2 56.432 241 96 4 127 363 84 319 6.02e-83 256
Msa0792370 AT1G70510.1 53.165 237 108 1 127 363 68 301 1.74e-78 244
Msa0792370 AT1G70510.2 52.282 241 108 2 127 363 68 305 3.35e-76 239
Msa0792370 AT5G25220.2 33.700 273 143 8 114 351 134 403 1.99e-35 135
Msa0792370 AT5G25220.1 33.700 273 143 8 114 351 134 403 2.38e-35 135
Msa0792370 AT1G62990.1 30.996 271 146 7 113 351 14 275 2.76e-35 131
Msa0792370 AT5G11060.1 33.603 247 137 7 129 351 124 367 1.23e-33 129
Msa0792370 AT4G32040.1 30.242 248 144 4 129 351 119 362 1.80e-32 126
Msa0792370 AT4G32040.2 30.242 248 144 4 129 351 119 362 1.96e-32 125
Msa0792370 AT1G19700.1 50.909 55 27 0 299 353 358 412 4.58e-11 64.7
Msa0792370 AT1G19700.3 50.909 55 27 0 299 353 358 412 4.58e-11 64.7
Msa0792370 AT1G19700.5 50.909 55 27 0 299 353 358 412 4.58e-11 64.7
Msa0792370 AT1G19700.4 50.909 55 27 0 299 353 358 412 4.58e-11 64.7
Msa0792370 AT1G19700.2 50.909 55 27 0 299 353 358 412 4.58e-11 64.7
Msa0792370 AT1G75430.1 49.091 55 28 0 299 353 209 263 6.25e-11 63.2
Msa0792370 AT2G27220.1 49.091 55 28 0 299 353 235 289 6.85e-11 63.9
Msa0792370 AT2G27220.3 49.091 55 28 0 299 353 235 289 6.85e-11 63.9
Msa0792370 AT2G27220.2 49.091 55 28 0 299 353 253 307 9.34e-11 63.5

Find 139 sgRNAs with CRISPR-Local

Find 662 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATATAATGAATGAAATTT+AGG 0.118791 5_3:-3567043 None:intergenic
CTACACACACGACTCATTTA+AGG 0.124114 5_3:-3578356 None:intergenic
TGATTGGAGCTTATAGATTT+TGG 0.131806 5_3:-3566928 None:intergenic
TTTCTTAAATTTGAGTTAAA+TGG 0.150949 5_3:+3567227 Msa0792370:exon
CTCTCAGCTTCTTAAACTTT+TGG 0.187811 5_3:+3566962 Msa0792370:five_prime_UTR
TAACTTTAGTTTGTGGTATT+TGG 0.189589 5_3:+3578379 Msa0792370:three_prime_UTR
CTAGAACTTTGATTTGAATT+TGG 0.201635 5_3:-3567273 None:intergenic
ATCAGAAGACATGCAGTTTA+TGG 0.215872 5_3:+3577748 Msa0792370:CDS
TTTGTGTGTGTTGGGGTAAA+GGG 0.245230 5_3:-3567003 None:intergenic
CTTTGATTTGAATTTGGATT+TGG 0.247339 5_3:-3567267 None:intergenic
TATATAAACAATCTCAAATA+TGG 0.248994 5_3:+3567059 Msa0792370:five_prime_UTR
AGTTAAACGTATATGGTATT+TGG 0.269110 5_3:+3567200 Msa0792370:five_prime_UTR
CATTATATGTTACTCTTTGT+TGG 0.270999 5_3:+3578273 Msa0792370:three_prime_UTR
GCTGATGGTCCCTACCGTTT+AGG 0.271349 5_3:+3577827 Msa0792370:CDS
CAACTCAATTCTCAAAATAT+AGG 0.276065 5_3:-3567169 None:intergenic
ACCAGTTATTTATTTGCTTC+TGG 0.277102 5_3:-3577694 None:intergenic
TTGAGGATGAGCAATGATTT+TGG 0.278077 5_3:-3567634 None:intergenic
GCAATGGAGTACAAGAAATT+TGG 0.293232 5_3:-3567297 None:intergenic
TATATAATGAATGAAATTTA+GGG 0.294647 5_3:-3567042 None:intergenic
CAAATTCAAATCAAAGTTCT+AGG 0.296764 5_3:+3567274 Msa0792370:CDS
ACAGAGTGCAGCTCTTTATA+TGG 0.322707 5_3:+3577790 Msa0792370:CDS
TCTCCAAGACATTGCTGGTT+TGG 0.331109 5_3:+3566798 Msa0792370:five_prime_UTR
ACCATGAATTGGTCTAGTTC+TGG 0.338115 5_3:-3568072 None:intergenic
CTGATGGTCCCTACCGTTTA+GGG 0.343258 5_3:+3577828 Msa0792370:CDS
AACTCAATTCTCAAAATATA+GGG 0.344206 5_3:-3567168 None:intergenic
CTAGACAAAAGCTACTTAAT+TGG 0.349186 5_3:+3577004 Msa0792370:CDS
ACCAAACGAGCCACCACTTC+CGG 0.349272 5_3:-3567982 None:intergenic
GTGGTTGACAAGACTTTGTT+TGG 0.352682 5_3:-3566770 None:intergenic
ACCGGAAGTGGTGGCTCGTT+TGG 0.365361 5_3:+3567981 Msa0792370:CDS
TTAGTCCATTTCTCAAATTA+CGG 0.369191 5_3:-3577898 None:intergenic
GTGAGAGAGTTAAACGTATA+TGG 0.372207 5_3:+3567193 Msa0792370:five_prime_UTR
TGAAGATGAAAGTTGTTCAT+TGG 0.383854 5_3:-3567384 None:intergenic
GATATATGAAGCGTTGATAC+TGG 0.384637 5_3:+3577861 Msa0792370:three_prime_UTR
GACAAAGAAAACAATTAATA+TGG 0.387956 5_3:-3578189 None:intergenic
CCCCATCTCCAAGACATTGC+TGG 0.392395 5_3:+3566793 Msa0792370:five_prime_UTR
GAGAGAGAAGAGAGAGTTGG+TGG 0.402390 5_3:-3566828 None:intergenic
ACCAGAAGCAAATAAATAAC+TGG 0.406580 5_3:+3577693 Msa0792370:CDS
ACTCTATAAAACAACAAAGT+AGG 0.412939 5_3:+3567131 Msa0792370:five_prime_UTR
ATTATAATATATAGTTTAAG+TGG 0.417051 5_3:+3578021 Msa0792370:three_prime_UTR
ACCAGCCGTAATTTGAGAAA+TGG 0.428135 5_3:+3577893 Msa0792370:three_prime_UTR
GTTGGTGTTGGTGTTGGTGT+TGG 0.428209 5_3:-3567332 None:intergenic
GAAAGGAAAATTACCTAAAG+AGG 0.441916 5_3:+3576981 Msa0792370:CDS
AAATCCATAGCCTCTTGTAT+AGG 0.443002 5_3:-3568341 None:intergenic
ATGATGATTATGCATAATAT+TGG 0.443654 5_3:-3567553 None:intergenic
GTTGGTGTTGGTGTTGGTGT+TGG 0.444222 5_3:-3567338 None:intergenic
GTAGCATTGGCTGAATCAAC+AGG 0.445109 5_3:+3577665 Msa0792370:CDS
TTACAAATGGCCTTATCCTT+CGG 0.445371 5_3:+3577038 Msa0792370:CDS
ATATTTGTTCTCATTAAAGC+TGG 0.445786 5_3:-3567519 None:intergenic
TGTTGATGTTGTACTTGATC+AGG 0.447416 5_3:-3567435 None:intergenic
GATTGTGTTGGTGTTGGTGT+TGG 0.454560 5_3:-3567344 None:intergenic
ATCATAATCATGGCCCTAAA+CGG 0.455352 5_3:-3577841 None:intergenic
GTTGATGATTGTGTTGGTGT+TGG 0.460652 5_3:-3567350 None:intergenic
ACCAGCAATGTCTTGGAGAT+GGG 0.461175 5_3:-3566794 None:intergenic
ATTGGCTGAATCAACAGGTT+TGG 0.461797 5_3:+3577670 Msa0792370:CDS
TGAACATTATCACCAATGTC+GGG 0.462343 5_3:+3577922 Msa0792370:three_prime_UTR
TCAGGTTGAAAACAATTGTC+TGG 0.466169 5_3:-3567417 None:intergenic
TTGGTTGTTTCCACTAGCAA+TGG 0.467119 5_3:-3567313 None:intergenic
AACTTTCATCTTCAATCAAG+TGG 0.468283 5_3:+3567393 Msa0792370:CDS
TTGTGTGTGTTGGGGTAAAG+GGG 0.473517 5_3:-3567002 None:intergenic
TCCAGAACTAGACCAATTCA+TGG 0.475218 5_3:+3568071 Msa0792370:CDS
GAGAGATGAGTGAAGATGAT+TGG 0.477246 5_3:-3566944 None:intergenic
CTTAAATTTGAGTTAAATGG+AGG 0.479098 5_3:+3567230 Msa0792370:exon
AGTCCAAACCAGCAATGTCT+TGG 0.481339 5_3:-3566801 None:intergenic
CACTTTGCAATGGACCCCTT+CGG 0.484187 5_3:+3568393 Msa0792370:CDS
GGTGGGAATTGCATTACAAA+TGG 0.484691 5_3:+3577025 Msa0792370:CDS
CGCTTCATATATCATAATCA+TGG 0.486017 5_3:-3577851 None:intergenic
TCTGCTCGAGGATCAATCTC+TGG 0.491728 5_3:-3576874 None:intergenic
TTATAATATAATATATAAAA+CGG 0.497706 5_3:-3578005 None:intergenic
GACATGCATAACATGAAACT+TGG 0.498903 5_3:+3578123 Msa0792370:three_prime_UTR
ACCAATGTCGGGGTGGTGGT+TGG 0.501049 5_3:+3577933 Msa0792370:three_prime_UTR
GATTGGAGCTCCACCGGAAG+TGG 0.502488 5_3:+3567969 Msa0792370:intron
CTCTATAAAACAACAAAGTA+GGG 0.503637 5_3:+3567132 Msa0792370:five_prime_UTR
GGACCCCTTCGGATCTTCCC+TGG 0.503797 5_3:+3568404 Msa0792370:CDS
AACCAGCAATGTCTTGGAGA+TGG 0.505140 5_3:-3566795 None:intergenic
TCAATCAAAGGAAGAGGCAC+TGG 0.507111 5_3:+3577720 Msa0792370:CDS
TCCATTTCTCAAATTACGGC+TGG 0.507610 5_3:-3577894 None:intergenic
TGGTATTTGGAGTGCTCAGA+AGG 0.508759 5_3:+3578392 Msa0792370:three_prime_UTR
TTATAACGTACCGAAGGATA+AGG 0.509147 5_3:-3577048 None:intergenic
CACTATATTTCTTCAGCAAG+TGG 0.509181 5_3:-3576915 None:intergenic
GATTATGTTGATGATTGTGT+TGG 0.509559 5_3:-3567356 None:intergenic
GACAAAAGCTACTTAATTGG+TGG 0.509834 5_3:+3577007 Msa0792370:CDS
AGTTGTCACTACCAGAGTAT+AGG 0.510244 5_3:-3578250 None:intergenic
TTATATGGATGGTCATTACA+TGG 0.510806 5_3:+3577805 Msa0792370:CDS
AAGGCCTATACAAGAGGCTA+TGG 0.514686 5_3:+3568337 Msa0792370:CDS
TTAGAGAGAGAAGAGAGAGT+TGG 0.516280 5_3:-3566831 None:intergenic
TGGCTCGTTTGGTTGCGTCT+AGG 0.518848 5_3:+3567992 Msa0792370:CDS
AGCTTACATGGATTGTCAAA+AGG 0.519024 5_3:+3567674 Msa0792370:CDS
TTGAACATTATCACCAATGT+CGG 0.520681 5_3:+3577921 Msa0792370:three_prime_UTR
TTCTTGTACTCCATTGCTAG+TGG 0.520994 5_3:+3567303 Msa0792370:CDS
GAGGATCAAGAGAATAGTGG+TGG 0.527205 5_3:+3576835 Msa0792370:CDS
AATTCACGGTCTTCTGCTCG+AGG 0.528363 5_3:-3576886 None:intergenic
CATCATCATCAAGGAGGAGG+AGG 0.530576 5_3:+3567570 Msa0792370:CDS
GGGCATTGACAGGGTGGAGA+AGG 0.530619 5_3:-3566907 None:intergenic
CACTTGCTGAAGAAATATAG+TGG 0.533238 5_3:+3576916 Msa0792370:CDS
TAATATATAGTTTAAGTGGA+AGG 0.538110 5_3:+3578025 Msa0792370:three_prime_UTR
GAAGAGGATCAAGAGAATAG+TGG 0.545053 5_3:+3576832 Msa0792370:CDS
GCTTCACCACTAGAACTGCT+TGG 0.545490 5_3:-3567597 None:intergenic
TCCAACCACCACCCCGACAT+TGG 0.547179 5_3:-3577934 None:intergenic
TATGTAGATTGGAGCTCCAC+CGG 0.547316 5_3:+3567963 Msa0792370:intron
GGAATCAGAGAAGGTAGCAT+TGG 0.547951 5_3:+3577652 Msa0792370:intron
TATCACCAATGTCGGGGTGG+TGG 0.551798 5_3:+3577929 Msa0792370:three_prime_UTR
ATGCATAATCATCATCATCA+AGG 0.555030 5_3:+3567561 Msa0792370:CDS
ATAAACTGCATGTCTTCTGA+TGG 0.556878 5_3:-3577746 None:intergenic
AGACATGCAGTTTATGGTGA+TGG 0.558113 5_3:+3577754 Msa0792370:CDS
CAGCTAAATACACTTTGCAA+TGG 0.562110 5_3:+3568383 Msa0792370:CDS
TAATCATGGCCCTAAACGGT+AGG 0.564867 5_3:-3577837 None:intergenic
TGGAGCTCCACCGGAAGTGG+TGG 0.570424 5_3:+3567972 Msa0792370:CDS
GGTTCATCAATCAAAGGAAG+AGG 0.570775 5_3:+3577714 Msa0792370:CDS
CCAGCAATGTCTTGGAGATG+GGG 0.572717 5_3:-3566793 None:intergenic
TGTAAAAGACTAGAGTATTG+AGG 0.573212 5_3:-3567651 None:intergenic
TGTGTAGTAACTTTAGTTTG+TGG 0.577107 5_3:+3578372 Msa0792370:three_prime_UTR
AGTGCAGCTCTTTATATGGA+TGG 0.581356 5_3:+3577794 Msa0792370:CDS
GGGAGTCCAAGCAGTTCTAG+TGG 0.587384 5_3:+3567591 Msa0792370:CDS
TATTTGTTCTCATTAAAGCT+GGG 0.591019 5_3:-3567518 None:intergenic
ATAACTGGTTCATCAATCAA+AGG 0.592016 5_3:+3577708 Msa0792370:CDS
ACAAAAGCTACTTAATTGGT+GGG 0.596461 5_3:+3577008 Msa0792370:CDS
AATCATCATCATCAAGGAGG+AGG 0.600518 5_3:+3567567 Msa0792370:CDS
ACTCACCAGGGAAGATCCGA+AGG 0.608503 5_3:-3568409 None:intergenic
TTATCTTCAATATGAAGCGT+CGG 0.612636 5_3:+3577958 Msa0792370:three_prime_UTR
ATCATCATCAAGGAGGAGGA+GGG 0.622603 5_3:+3567571 Msa0792370:CDS
ATTAACAAGGCCTATACAAG+AGG 0.622954 5_3:+3568331 Msa0792370:CDS
AGGCGTTGGTTCATCAGAAG+AGG 0.623533 5_3:+3576816 Msa0792370:CDS
AATCATGGCCCTAAACGGTA+GGG 0.623950 5_3:-3577836 None:intergenic
ATGCAGTTTATGGTGATGGA+TGG 0.624056 5_3:+3577758 Msa0792370:CDS
ATATAAAGAGCTGCACTCTG+TGG 0.627158 5_3:-3577788 None:intergenic
AAACGAGCCACCACTTCCGG+TGG 0.627824 5_3:-3567979 None:intergenic
CAGCAATGTCTTGGAGATGG+GGG 0.638446 5_3:-3566792 None:intergenic
GATGGTCATTACATGGCTGA+TGG 0.643940 5_3:+3577812 Msa0792370:CDS
CACTATATAGGAATCAGAGA+AGG 0.647456 5_3:+3577643 Msa0792370:intron
CATGCTTGTGAAGTATAGAG+AGG 0.648293 5_3:+3568307 Msa0792370:CDS
AATTACGTACTCCTATACTC+TGG 0.664087 5_3:+3578239 Msa0792370:three_prime_UTR
CATTATCACCAATGTCGGGG+TGG 0.670905 5_3:+3577926 Msa0792370:three_prime_UTR
GAACATTATCACCAATGTCG+GGG 0.675009 5_3:+3577923 Msa0792370:three_prime_UTR
CTCACCAGGGAAGATCCGAA+GGG 0.678902 5_3:-3568408 None:intergenic
CTAGGCAAGAGTTTGAAGCA+AGG 0.689197 5_3:+3568010 Msa0792370:CDS
CATAATCATCATCATCAAGG+AGG 0.690149 5_3:+3567564 Msa0792370:CDS
TTATGCATAATATTGGTGTG+TGG 0.710252 5_3:-3567546 None:intergenic
AGTATAGAGAGGAATTAACA+AGG 0.714149 5_3:+3568318 Msa0792370:CDS
TCACCAGGGAAGATCCGAAG+GGG 0.724320 5_3:-3568407 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATATATATAAAAAAAT+GGG - chr5_3:3567907-3567926 None:intergenic 0.0%
!! AAAATATATATATAAAAAAA+TGG - chr5_3:3567908-3567927 None:intergenic 0.0%
!!! TTTTTTTTTTTTTTTTTTTA+AGG + chr5_3:3569506-3569525 Msa0792370:intron 0.0%
!! AATTTAAAAATATATTATAA+AGG - chr5_3:3573059-3573078 None:intergenic 0.0%
!!! TAATTTTTTTTATATTTTTT+TGG - chr5_3:3573907-3573926 None:intergenic 0.0%
!! AATAATAAAAAATAAAAAAA+GGG - chr5_3:3575648-3575667 None:intergenic 0.0%
!! TTATAATATAATATATAAAA+CGG - chr5_3:3578008-3578027 None:intergenic 0.0%
!! TATATAATGAATGAAATTTA+GGG - chr5_3:3567045-3567064 None:intergenic 10.0%
!! TTATATAATGAATGAAATTT+AGG - chr5_3:3567046-3567065 None:intergenic 10.0%
!! TTATAGAGTAATAAAAATTA+TGG - chr5_3:3567120-3567139 None:intergenic 10.0%
!! TTTAAACTTAATAATTATCA+TGG - chr5_3:3568170-3568189 None:intergenic 10.0%
!!! AAAAAAAAAAAAAGTATGTT+GGG - chr5_3:3569497-3569516 None:intergenic 10.0%
!!! AAAAAAAAAAAAAAGTATGT+TGG - chr5_3:3569498-3569517 None:intergenic 10.0%
!!! TTAATCTTTTAACTTAATTT+TGG + chr5_3:3570996-3571015 Msa0792370:intron 10.0%
!! GTAAATAATTAAACAATAAA+AGG - chr5_3:3571152-3571171 None:intergenic 10.0%
!! AAGTTAAAAAAATATGATTA+AGG - chr5_3:3572644-3572663 None:intergenic 10.0%
!!! AAATAATTTTCATTTTTTCA+TGG - chr5_3:3573372-3573391 None:intergenic 10.0%
!! TAAATGTAAAATTACATAAA+AGG + chr5_3:3573578-3573597 Msa0792370:intron 10.0%
!!! TTTTATTAATGTATAATAAC+TGG - chr5_3:3573713-3573732 None:intergenic 10.0%
!! GTTAAATAGTATTAATTTAT+AGG + chr5_3:3573851-3573870 Msa0792370:intron 10.0%
!!! TATTTTACTTGAAATTATAA+AGG + chr5_3:3574187-3574206 Msa0792370:intron 10.0%
!!! ATTTTACTTGAAATTATAAA+GGG + chr5_3:3574188-3574207 Msa0792370:intron 10.0%
!!! ATTTTCTTAAATGTTTTTAT+AGG + chr5_3:3575526-3575545 Msa0792370:intron 10.0%
!!! TTTTCTTAAATGTTTTTATA+GGG + chr5_3:3575527-3575546 Msa0792370:intron 10.0%
!!! TTAATTACATGATTTTTTTT+AGG + chr5_3:3575876-3575895 Msa0792370:intron 10.0%
!!! TAATTACATGATTTTTTTTA+GGG + chr5_3:3575877-3575896 Msa0792370:intron 10.0%
!! ATAGAGTATAAATAATTATA+CGG + chr5_3:3576265-3576284 Msa0792370:intron 10.0%
!! ATCTATAAAAAAAAATACTT+TGG + chr5_3:3576498-3576517 Msa0792370:intron 10.0%
!! GTCAAAAAAAAAAAAAAAAT+AGG - chr5_3:3576687-3576706 None:intergenic 10.0%
!! TATATATATATAAAATGAGA+AGG - chr5_3:3577149-3577168 None:intergenic 10.0%
!!! CATGTAATTTTTTTATTAAT+AGG - chr5_3:3577515-3577534 None:intergenic 10.0%
!! ATTATAATATATAGTTTAAG+TGG + chr5_3:3578021-3578040 Msa0792370:three_prime_UTR 10.0%
!! TATATAAACAATCTCAAATA+TGG + chr5_3:3567059-3567078 Msa0792370:five_prime_UTR 15.0%
!!! TTTCTTAAATTTGAGTTAAA+TGG + chr5_3:3567227-3567246 Msa0792370:exon 15.0%
!!! TTTTTAAATTGTTATCATGA+TGG - chr5_3:3567877-3567896 None:intergenic 15.0%
!!! TTTTTTTATTGTTGCTAAAA+CGG + chr5_3:3568974-3568993 Msa0792370:intron 15.0%
!!! CTATGAAAAATTTATAGTTT+TGG + chr5_3:3569377-3569396 Msa0792370:intron 15.0%
!!! AAAAAAAAAAAAGTATGTTG+GGG - chr5_3:3569496-3569515 None:intergenic 15.0%
!! AATAATATCATATAAGTTGT+TGG - chr5_3:3569695-3569714 None:intergenic 15.0%
!!! ACTTGTTAAATAGAAAAAAT+TGG - chr5_3:3570454-3570473 None:intergenic 15.0%
!! TTTAATACATATACAAACAA+AGG - chr5_3:3570765-3570784 None:intergenic 15.0%
!! ACAAGTTAGTAATATTAATT+AGG + chr5_3:3570806-3570825 Msa0792370:intron 15.0%
!! CAAGTTAGTAATATTAATTA+GGG + chr5_3:3570807-3570826 Msa0792370:intron 15.0%
!! AAGTTAGTAATATTAATTAG+GGG + chr5_3:3570808-3570827 Msa0792370:intron 15.0%
!!! AATTTTTTTCGAAATTTTAG+TGG + chr5_3:3571723-3571742 Msa0792370:intron 15.0%
!!! ATTTTTTTCGAAATTTTAGT+GGG + chr5_3:3571724-3571743 Msa0792370:intron 15.0%
!! CTAATTATTTATAAATGAAG+AGG + chr5_3:3571889-3571908 Msa0792370:intron 15.0%
!! CTCTAATAAATAAGATTAAA+AGG - chr5_3:3571969-3571988 None:intergenic 15.0%
!! TTATTTATTAGAGACATTTA+GGG + chr5_3:3571976-3571995 Msa0792370:intron 15.0%
!!! TAATCTAATGATAATTTTGT+CGG - chr5_3:3572114-3572133 None:intergenic 15.0%
!!! TATTGTTATTATTATTAGGT+TGG + chr5_3:3572172-3572191 Msa0792370:intron 15.0%
!! GAACAACTATTATTATTATT+AGG + chr5_3:3572211-3572230 Msa0792370:intron 15.0%
!! TAGTAATAAAAATTGTTACA+AGG - chr5_3:3572285-3572304 None:intergenic 15.0%
!! GAAATAATAGATTAGTAATA+GGG - chr5_3:3572318-3572337 None:intergenic 15.0%
!! TGAAATAATAGATTAGTAAT+AGG - chr5_3:3572319-3572338 None:intergenic 15.0%
!! TCCTTATATAATTAAGTTTA+AGG + chr5_3:3572393-3572412 Msa0792370:intron 15.0%
!! CCTTATATAATTAAGTTTAA+GGG + chr5_3:3572394-3572413 Msa0792370:intron 15.0%
!!! ATTTTAATTAAAAACGTGTT+TGG - chr5_3:3572465-3572484 None:intergenic 15.0%
!! AATTTAAATGTCTCTTATAT+AGG + chr5_3:3572601-3572620 Msa0792370:intron 15.0%
!! ATTTAAATGTCTCTTATATA+GGG + chr5_3:3572602-3572621 Msa0792370:intron 15.0%
!! AGATAATTAAAGATATCTAA+AGG - chr5_3:3572822-3572841 None:intergenic 15.0%
!!! ATTTCGCTTTTAATAATTTT+TGG + chr5_3:3573076-3573095 Msa0792370:intron 15.0%
!! AAAGTTATTTATACTTGAAA+AGG + chr5_3:3573313-3573332 Msa0792370:intron 15.0%
!! AAAAATTGTTAAAAAAACGA+AGG + chr5_3:3573795-3573814 Msa0792370:intron 15.0%
!! ATTAATACTATTTAACGATT+TGG - chr5_3:3573847-3573866 None:intergenic 15.0%
!!! AATATATATGTTTTTAATGC+AGG - chr5_3:3574171-3574190 None:intergenic 15.0%
!!! AGGTTTTAGATTAAATAATA+AGG + chr5_3:3574218-3574237 Msa0792370:intron 15.0%
!!! GGTTTTAGATTAAATAATAA+GGG + chr5_3:3574219-3574238 Msa0792370:intron 15.0%
!! TTAAATAATAAGGGTAAAAT+TGG + chr5_3:3574228-3574247 Msa0792370:intron 15.0%
!! TCATTGAAAAAATAAACTAA+GGG - chr5_3:3574450-3574469 None:intergenic 15.0%
!! GAAAAACAAATATTTAATGA+AGG + chr5_3:3574476-3574495 Msa0792370:intron 15.0%
!!! TGAACTCTTTTTAAAAAAAA+TGG + chr5_3:3574954-3574973 Msa0792370:intron 15.0%
!! AAATAGATAAAATTCATTCT+TGG + chr5_3:3575208-3575227 Msa0792370:intron 15.0%
!! ATAAGTCATAAATTAACAAT+TGG + chr5_3:3575927-3575946 Msa0792370:intron 15.0%
!! TAAGTCATAAATTAACAATT+GGG + chr5_3:3575928-3575947 Msa0792370:intron 15.0%
!!! GTTAAAATTTTGTAAAAAAG+TGG + chr5_3:3576086-3576105 Msa0792370:intron 15.0%
!! ACTTAAAAAAAATATAAAGG+TGG - chr5_3:3576119-3576138 None:intergenic 15.0%
!! AGCACTTAAAAAAAATATAA+AGG - chr5_3:3576122-3576141 None:intergenic 15.0%
!!! AGTAATAAAATTTACTTTTG+TGG - chr5_3:3577314-3577333 None:intergenic 15.0%
!! GAGTAATAAAAATTATGGAA+AGG - chr5_3:3567115-3567134 None:intergenic 20.0%
!! AACTCAATTCTCAAAATATA+GGG - chr5_3:3567171-3567190 None:intergenic 20.0%
!! ATGATGATTATGCATAATAT+TGG - chr5_3:3567556-3567575 None:intergenic 20.0%
!! TTTCAGTCAGAAATTAAATT+TGG + chr5_3:3567844-3567863 Msa0792370:intron 20.0%
!! TAAACAAACTATATGTAGAT+TGG + chr5_3:3567952-3567971 Msa0792370:intron 20.0%
!!! ATTAGAACTTATAGATTTTG+TGG + chr5_3:3568236-3568255 Msa0792370:intron 20.0%
!! AATATCATCTTCACTTATAT+GGG - chr5_3:3568724-3568743 None:intergenic 20.0%
!! AAATATCATCTTCACTTATA+TGG - chr5_3:3568725-3568744 None:intergenic 20.0%
!!! TTGTATTTTTTTTTTCCCTT+TGG + chr5_3:3568858-3568877 Msa0792370:intron 20.0%
!! GAATTGAAAAGTGATTAAAA+CGG - chr5_3:3569229-3569248 None:intergenic 20.0%
!!! TTCAATTCTCTATTTTCTTT+TGG + chr5_3:3569241-3569260 Msa0792370:intron 20.0%
!!! TCAATTCTCTATTTTCTTTT+GGG + chr5_3:3569242-3569261 Msa0792370:intron 20.0%
!! TATACTTATGACATTATAGT+TGG - chr5_3:3570114-3570133 None:intergenic 20.0%
!! GAGATGAAAATACTTATAAA+TGG - chr5_3:3570254-3570273 None:intergenic 20.0%
!!! TTTAAAACTTTATTGCTAGT+TGG - chr5_3:3570349-3570368 None:intergenic 20.0%
!!! CTAGCAATAAAGTTTTAAAA+AGG + chr5_3:3570350-3570369 Msa0792370:intron 20.0%
!!! TATTTGAACAATCATTTTCA+TGG + chr5_3:3570531-3570550 Msa0792370:intron 20.0%
!! AGAAATGTGAAAAAAACAAA+GGG - chr5_3:3570682-3570701 None:intergenic 20.0%
!! AAGAAATGTGAAAAAAACAA+AGG - chr5_3:3570683-3570702 None:intergenic 20.0%
!! AAAATAATTCAATTTCGGAA+AGG - chr5_3:3571210-3571229 None:intergenic 20.0%
!!! TTCCGAAATTGAATTATTTT+CGG + chr5_3:3571210-3571229 Msa0792370:intron 20.0%
!! TTGGTAAGTTATAAAGAAAA+TGG + chr5_3:3571538-3571557 Msa0792370:intron 20.0%
!! ATTATCAATTGAATGAAACA+AGG + chr5_3:3571604-3571623 Msa0792370:intron 20.0%
!!! TTTTTTTCGAAATTTTAGTG+GGG + chr5_3:3571725-3571744 Msa0792370:intron 20.0%
!! CTTATTTATTAGAGACATTT+AGG + chr5_3:3571975-3571994 Msa0792370:intron 20.0%
!!! TATTTTTAATTTGACGTGTT+TGG + chr5_3:3572038-3572057 Msa0792370:intron 20.0%
!!! TTTGGTTCAATTTTTAAGAA+AGG + chr5_3:3572056-3572075 Msa0792370:intron 20.0%
!!! TTGGTTCAATTTTTAAGAAA+GGG + chr5_3:3572057-3572076 Msa0792370:intron 20.0%
!! AGGAAAAGTTGTTAATAATA+TGG - chr5_3:3572265-3572284 None:intergenic 20.0%
!! CCCTTAAACTTAATTATATA+AGG - chr5_3:3572397-3572416 None:intergenic 20.0%
!!! TATCTGGTTTAAAATATAGA+CGG + chr5_3:3572560-3572579 Msa0792370:intron 20.0%
!! AAAATATGATTAAGGACTAA+AGG - chr5_3:3572636-3572655 None:intergenic 20.0%
!!! TTTTATGATTTTGACGTTTA+TGG + chr5_3:3573235-3573254 Msa0792370:intron 20.0%
!!! TTTATGATTTTGACGTTTAT+GGG + chr5_3:3573236-3573255 Msa0792370:intron 20.0%
!! TATCTAAATCCTTTATCATT+TGG + chr5_3:3573262-3573281 Msa0792370:intron 20.0%
!! TGAGACAAGTTTAATATAAA+AGG + chr5_3:3574043-3574062 Msa0792370:intron 20.0%
!! ATAAAAGGCAAAGAATTTAA+CGG + chr5_3:3574058-3574077 Msa0792370:intron 20.0%
!!! TGGTTCGTTAATTTTTTTTT+TGG - chr5_3:3574086-3574105 None:intergenic 20.0%
!!! TTCATTTTATATTCCTTTGA+AGG - chr5_3:3574123-3574142 None:intergenic 20.0%
!! AAATTATAAAGGGTAAAACA+AGG + chr5_3:3574198-3574217 Msa0792370:intron 20.0%
!! CTCATTGAAAAAATAAACTA+AGG - chr5_3:3574451-3574470 None:intergenic 20.0%
!! TTGAATAATAAGGGTAAATA+TGG + chr5_3:3574626-3574645 Msa0792370:intron 20.0%
!! TTCATATTAGATACATTCTT+CGG - chr5_3:3574858-3574877 None:intergenic 20.0%
!! TTTGAATTGCATTCAAATAA+TGG + chr5_3:3575085-3575104 Msa0792370:intron 20.0%
!! TTGAATTGCATTCAAATAAT+GGG + chr5_3:3575086-3575105 Msa0792370:intron 20.0%
!!! AAACGATGCTTATTTTTTAT+AGG - chr5_3:3575284-3575303 None:intergenic 20.0%
!! ATACTATAATAACATGAAAG+TGG - chr5_3:3575417-3575436 None:intergenic 20.0%
!!! TCTCATAAAATTCACTTTTA+TGG + chr5_3:3575554-3575573 Msa0792370:intron 20.0%
!! TAAAGTTGCTAATTAACTTT+AGG - chr5_3:3575824-3575843 None:intergenic 20.0%
!! AAAGTTAATTAGCAACTTTA+AGG + chr5_3:3575824-3575843 Msa0792370:intron 20.0%
!!! AAAATTTTGTAAAAAAGTGG+TGG + chr5_3:3576089-3576108 Msa0792370:intron 20.0%
!!! AAATTTTGTAAAAAAGTGGT+GGG + chr5_3:3576090-3576109 Msa0792370:intron 20.0%
!! AGTATAAATAATTATACGGA+AGG + chr5_3:3576269-3576288 Msa0792370:intron 20.0%
!!! TGTGAAATAATGTTTTCATT+CGG + chr5_3:3576337-3576356 Msa0792370:intron 20.0%
!! ATTCTAATATCATCTTAGAA+CGG - chr5_3:3576480-3576499 None:intergenic 20.0%
!! TGATTTATAAATCCTAAGTT+AGG + chr5_3:3576609-3576628 Msa0792370:intron 20.0%
!!! ATACATTTTGCTATAGATAT+AGG - chr5_3:3576656-3576675 None:intergenic 20.0%
!!! TAAAATTTACTTTTGTGGTT+TGG - chr5_3:3577309-3577328 None:intergenic 20.0%
!! TATATTCGAAACAAATGAAT+TGG - chr5_3:3577429-3577448 None:intergenic 20.0%
!!! AAAAATTACATGTTGCATTT+TGG + chr5_3:3577523-3577542 Msa0792370:intron 20.0%
!! AGAAAGGAAAAAAAAAACTA+TGG - chr5_3:3577594-3577613 None:intergenic 20.0%
!! TAATATATAGTTTAAGTGGA+AGG + chr5_3:3578025-3578044 Msa0792370:three_prime_UTR 20.0%
!! GACAAAGAAAACAATTAATA+TGG - chr5_3:3578192-3578211 None:intergenic 20.0%
!! TCTCAAATATGGTTTTCATT+AGG + chr5_3:3567070-3567089 Msa0792370:five_prime_UTR 25.0%
!! CTCAAATATGGTTTTCATTA+GGG + chr5_3:3567071-3567090 Msa0792370:five_prime_UTR 25.0%
! ACTCTATAAAACAACAAAGT+AGG + chr5_3:3567131-3567150 Msa0792370:five_prime_UTR 25.0%
! CTCTATAAAACAACAAAGTA+GGG + chr5_3:3567132-3567151 Msa0792370:five_prime_UTR 25.0%
! CAACTCAATTCTCAAAATAT+AGG - chr5_3:3567172-3567191 None:intergenic 25.0%
! AGTTAAACGTATATGGTATT+TGG + chr5_3:3567200-3567219 Msa0792370:five_prime_UTR 25.0%
!! CTTAAATTTGAGTTAAATGG+AGG + chr5_3:3567230-3567249 Msa0792370:exon 25.0%
!!! CTTTGATTTGAATTTGGATT+TGG - chr5_3:3567270-3567289 None:intergenic 25.0%
!!! CTAGAACTTTGATTTGAATT+TGG - chr5_3:3567276-3567295 None:intergenic 25.0%
! CAAATTCAAATCAAAGTTCT+AGG + chr5_3:3567274-3567293 Msa0792370:CDS 25.0%
! TATTTGTTCTCATTAAAGCT+GGG - chr5_3:3567521-3567540 None:intergenic 25.0%
! ATATTTGTTCTCATTAAAGC+TGG - chr5_3:3567522-3567541 None:intergenic 25.0%
! TTGGTTAATCTCAAATTTAG+TGG + chr5_3:3567783-3567802 Msa0792370:intron 25.0%
! TTAATCTCAAATTTAGTGGA+AGG + chr5_3:3567787-3567806 Msa0792370:intron 25.0%
! TAAATTGTTATCATGATGGT+GGG - chr5_3:3567873-3567892 None:intergenic 25.0%
! TTAAATTGTTATCATGATGG+TGG - chr5_3:3567874-3567893 None:intergenic 25.0%
! AAATGGTGTTTATGTTTAAC+AGG + chr5_3:3568271-3568290 Msa0792370:intron 25.0%
! ACGAACTCATAAATTAATTC+TGG + chr5_3:3568550-3568569 Msa0792370:intron 25.0%
! GATAAAAAATGTAGCGATTA+GGG - chr5_3:3568765-3568784 None:intergenic 25.0%
! TGATAAAAAATGTAGCGATT+AGG - chr5_3:3568766-3568785 None:intergenic 25.0%
! AATGAAATCAAATGTCCAAA+GGG - chr5_3:3568876-3568895 None:intergenic 25.0%
! AAATGAAATCAAATGTCCAA+AGG - chr5_3:3568877-3568896 None:intergenic 25.0%
!! TTTTATACCTAACCTTTTAG+AGG + chr5_3:3568900-3568919 Msa0792370:intron 25.0%
!! TTTATACCTAACCTTTTAGA+GGG + chr5_3:3568901-3568920 Msa0792370:intron 25.0%
! GAAACAGTAAAAAATTCATC+TGG - chr5_3:3568953-3568972 None:intergenic 25.0%
! TCTGACAAAATTATTCTTCT+AGG + chr5_3:3569055-3569074 Msa0792370:intron 25.0%
! CTGACAAAATTATTCTTCTA+GGG + chr5_3:3569056-3569075 Msa0792370:intron 25.0%
! AAAAAAGGATGCAAAAGAAA+GGG - chr5_3:3569442-3569461 None:intergenic 25.0%
! TAAAAAAGGATGCAAAAGAA+AGG - chr5_3:3569443-3569462 None:intergenic 25.0%
!!! TCCTTTTTTACAAAACACAT+TGG + chr5_3:3569453-3569472 Msa0792370:intron 25.0%
!! TCCAATGTGTTTTGTAAAAA+AGG - chr5_3:3569457-3569476 None:intergenic 25.0%
! AAATATGATCAAAGTATGTC+AGG - chr5_3:3569782-3569801 None:intergenic 25.0%
! AATATCATATAAGCTGTTGT+TGG + chr5_3:3569826-3569845 Msa0792370:intron 25.0%
! TTAACTAGGTCATCTAATAT+GGG + chr5_3:3569955-3569974 Msa0792370:intron 25.0%
! GAGGGAGTAATAAAAAAATA+AGG + chr5_3:3569981-3570000 Msa0792370:intron 25.0%
! CAAGATCCTTAAAAAAAAAG+AGG + chr5_3:3570503-3570522 Msa0792370:intron 25.0%
!!! AACACACCTCTTTTTTTTTA+AGG - chr5_3:3570512-3570531 None:intergenic 25.0%
! TATACAAACAAAGGACAATA+TGG - chr5_3:3570756-3570775 None:intergenic 25.0%
!!! TATTAATTAGGGGTATGTTT+TGG + chr5_3:3570818-3570837 Msa0792370:intron 25.0%
! ATGCATCTAGTAATTTGAAA+AGG + chr5_3:3570856-3570875 Msa0792370:intron 25.0%
! TGCATCTAGTAATTTGAAAA+GGG + chr5_3:3570857-3570876 Msa0792370:intron 25.0%
! GGACAAAAATAAAGTCAAAT+GGG + chr5_3:3570892-3570911 Msa0792370:intron 25.0%
!! ACATTTCCAATGATTTTTCA+GGG - chr5_3:3571120-3571139 None:intergenic 25.0%
! TGCCGAAAATAATTCAATTT+CGG - chr5_3:3571215-3571234 None:intergenic 25.0%
!! ATTTTCCATATCAGAGAAAT+TGG - chr5_3:3571270-3571289 None:intergenic 25.0%
! TTTCTCTGATATGGAAAATT+TGG + chr5_3:3571271-3571290 Msa0792370:intron 25.0%
! TTCTCTGATATGGAAAATTT+GGG + chr5_3:3571272-3571291 Msa0792370:intron 25.0%
! TATAAAGAAAATGGCAGAAA+AGG + chr5_3:3571547-3571566 Msa0792370:intron 25.0%
!!! ATAATTAGATAGTGCCATTT+AGG - chr5_3:3571877-3571896 None:intergenic 25.0%
! TAAAAGGAGTAATTATCAAG+TGG - chr5_3:3571953-3571972 None:intergenic 25.0%
!!! TTCAATTTTTAAGAAAGGGA+GGG + chr5_3:3572061-3572080 Msa0792370:intron 25.0%
! ACTCATAAGCATGTATTTAT+CGG - chr5_3:3572897-3572916 None:intergenic 25.0%
! ATAATGCATATAGTCAAACA+AGG + chr5_3:3572947-3572966 Msa0792370:intron 25.0%
!!! TTATGATTTTGACGTTTATG+GGG + chr5_3:3573237-3573256 Msa0792370:intron 25.0%
! TTGATTGATCCAAATGATAA+AGG - chr5_3:3573274-3573293 None:intergenic 25.0%
! AGAAGTCATTATAAAATGGA+GGG - chr5_3:3573397-3573416 None:intergenic 25.0%
! AGACAGAAGTCATTATAAAA+TGG - chr5_3:3573401-3573420 None:intergenic 25.0%
!! TTTTATAATGACTTCTGTCT+TGG + chr5_3:3573401-3573420 Msa0792370:intron 25.0%
! TTTATAATGACTTCTGTCTT+GGG + chr5_3:3573402-3573421 Msa0792370:intron 25.0%
!!! TGAAGGCATTTAATTGTATA+TGG - chr5_3:3574106-3574125 None:intergenic 25.0%
! ATACAATTAAATGCCTTCAA+AGG + chr5_3:3574107-3574126 Msa0792370:intron 25.0%
!! AAGCTATAAGCTCATTTTAA+TGG + chr5_3:3574411-3574430 Msa0792370:intron 25.0%
!!! AGCTTTTGCTTTGAATAATA+AGG + chr5_3:3574616-3574635 Msa0792370:intron 25.0%
!!! GCTTTTGCTTTGAATAATAA+GGG + chr5_3:3574617-3574636 Msa0792370:intron 25.0%
! TTAGACACATCCATTAAAAA+AGG + chr5_3:3575003-3575022 Msa0792370:intron 25.0%
!!! AAAATTGCAGCCTTTTTTAA+TGG - chr5_3:3575016-3575035 None:intergenic 25.0%
!!! GATGCTTATTTTTTATAGGA+GGG - chr5_3:3575280-3575299 None:intergenic 25.0%
!!! AGCATCGTTTTAGAAAAAAT+TGG + chr5_3:3575294-3575313 Msa0792370:intron 25.0%
!! TCCTCAATTTCGATATTTTA+AGG + chr5_3:3575364-3575383 Msa0792370:intron 25.0%
! ACCTTAAAATATCGAAATTG+AGG - chr5_3:3575368-3575387 None:intergenic 25.0%
!!! GTTTCCATGAAGTTTTTTTA+TGG + chr5_3:3575488-3575507 Msa0792370:intron 25.0%
! TTGTCCATAAAAAAACTTCA+TGG - chr5_3:3575495-3575514 None:intergenic 25.0%
! ATTGAATGTAGAAGTGATAT+CGG - chr5_3:3575782-3575801 None:intergenic 25.0%
!! CATCTAAGGTACAAATTTAA+GGG - chr5_3:3576158-3576177 None:intergenic 25.0%
! TACATCTATCTATCTATAAG+TGG + chr5_3:3576404-3576423 Msa0792370:intron 25.0%
! ACATCTATCTATCTATAAGT+GGG + chr5_3:3576405-3576424 Msa0792370:intron 25.0%
! GATTTATAAATCAACTTGCA+AGG - chr5_3:3576602-3576621 None:intergenic 25.0%
!! ATATAGGCCTTTAAGAATTT+GGG - chr5_3:3576640-3576659 None:intergenic 25.0%
! TGAGTAGATGATAAAAATGA+AGG + chr5_3:3576796-3576815 Msa0792370:intron 25.0%
!! TTTTCCTTTCTTTTTCTTCT+TGG - chr5_3:3576971-3576990 None:intergenic 25.0%
!!! CAAGAATATTCGATTTTTTG+CGG - chr5_3:3577203-3577222 None:intergenic 25.0%
!!! GTTGTTTTGTAAAAACTGTT+AGG + chr5_3:3577236-3577255 Msa0792370:intron 25.0%
!!! GTTTAATTTGGATCGATTTT+TGG - chr5_3:3577553-3577572 None:intergenic 25.0%
! TTAGTCCATTTCTCAAATTA+CGG - chr5_3:3577901-3577920 None:intergenic 25.0%
! CATTATATGTTACTCTTTGT+TGG + chr5_3:3578273-3578292 Msa0792370:three_prime_UTR 25.0%
!!! TAACTTTAGTTTGTGGTATT+TGG + chr5_3:3578379-3578398 Msa0792370:three_prime_UTR 25.0%
! GATTGGAGCTTATAGATTTT+GGG - chr5_3:3566930-3566949 None:intergenic 30.0%
! TGATTGGAGCTTATAGATTT+TGG - chr5_3:3566931-3566950 None:intergenic 30.0%
!! GATTATGTTGATGATTGTGT+TGG - chr5_3:3567359-3567378 None:intergenic 30.0%
TGAAGATGAAAGTTGTTCAT+TGG - chr5_3:3567387-3567406 None:intergenic 30.0%
AACTTTCATCTTCAATCAAG+TGG + chr5_3:3567393-3567412 Msa0792370:CDS 30.0%
TTATGCATAATATTGGTGTG+TGG - chr5_3:3567549-3567568 None:intergenic 30.0%
ATGCATAATCATCATCATCA+AGG + chr5_3:3567561-3567580 Msa0792370:CDS 30.0%
!! TGTAAAAGACTAGAGTATTG+AGG - chr5_3:3567654-3567673 None:intergenic 30.0%
! TAGTCTTTTACAAGCTTACA+TGG + chr5_3:3567662-3567681 Msa0792370:CDS 30.0%
!!! AGGGGGTATATTTTGTTTTA+TGG + chr5_3:3568098-3568117 Msa0792370:intron 30.0%
AGTATAGAGAGGAATTAACA+AGG + chr5_3:3568318-3568337 Msa0792370:CDS 30.0%
!! TTGAAAGCATGTGAGATTTT+TGG - chr5_3:3568677-3568696 None:intergenic 30.0%
! GAATAATTTTGTCAGAACTC+AGG - chr5_3:3569051-3569070 None:intergenic 30.0%
! CAGCAAAACATTGATTAACA+AGG - chr5_3:3569085-3569104 None:intergenic 30.0%
!! TGTTTTGCTGACTAAAAACT+CGG + chr5_3:3569095-3569114 Msa0792370:intron 30.0%
ACTCTTTCTCATCATTACAT+TGG + chr5_3:3569174-3569193 Msa0792370:intron 30.0%
! CATTACATTGGTCAGTTTTT+CGG + chr5_3:3569186-3569205 Msa0792370:intron 30.0%
! AAAAAAAAGTATGTTGGGGT+TGG - chr5_3:3569492-3569511 None:intergenic 30.0%
TCAAACAGGTCATCTAATAA+GGG - chr5_3:3569743-3569762 None:intergenic 30.0%
! AAAAGTGCAAATTGTCAAAC+AGG - chr5_3:3569757-3569776 None:intergenic 30.0%
GTTAACTAGGTCATCTAATA+TGG + chr5_3:3569954-3569973 Msa0792370:intron 30.0%
CTAGGTCATTTATTGTAGAA+CGG + chr5_3:3570038-3570057 Msa0792370:intron 30.0%
AGAACTAACTCATGTATGTT+GGG - chr5_3:3570229-3570248 None:intergenic 30.0%
CTTCTTAACAAGTGTCATAA+CGG - chr5_3:3570396-3570415 None:intergenic 30.0%
! GACACTTGTTAAGAAGTTTA+AGG + chr5_3:3570400-3570419 Msa0792370:intron 30.0%
! ATCATTTTCATGGCAACTTT+TGG + chr5_3:3570541-3570560 Msa0792370:intron 30.0%
! TCATTTTCATGGCAACTTTT+GGG + chr5_3:3570542-3570561 Msa0792370:intron 30.0%
ACAAAGGGATGTTACATTAA+GGG - chr5_3:3570667-3570686 None:intergenic 30.0%
AACAAAGGGATGTTACATTA+AGG - chr5_3:3570668-3570687 None:intergenic 30.0%
GCATCTAGTAATTTGAAAAG+GGG + chr5_3:3570858-3570877 Msa0792370:intron 30.0%
TTGAAAAGGGGTTTAGATTT+AGG + chr5_3:3570870-3570889 Msa0792370:intron 30.0%
TGAAAAGGGGTTTAGATTTA+GGG + chr5_3:3570871-3570890 Msa0792370:intron 30.0%
GGGACAAAAATAAAGTCAAA+TGG + chr5_3:3570891-3570910 Msa0792370:intron 30.0%
CAAAAATAAAGTCAAATGGG+TGG + chr5_3:3570895-3570914 Msa0792370:intron 30.0%
!!! ACTTAATTTTGGCTGAAACT+TGG + chr5_3:3571007-3571026 Msa0792370:intron 30.0%
TGAGATATGGACACAAAAAA+TGG - chr5_3:3571050-3571069 None:intergenic 30.0%
TCCATATCTCATTAAATGAC+CGG + chr5_3:3571059-3571078 Msa0792370:intron 30.0%
AGGGTAAAGGAATAATTGTA+GGG - chr5_3:3571101-3571120 None:intergenic 30.0%
! GACATTTCCAATGATTTTTC+AGG - chr5_3:3571121-3571140 None:intergenic 30.0%
GAAAGGAAATAAAACTCTAC+AGG - chr5_3:3571193-3571212 None:intergenic 30.0%
!!! AAGTAAACCTTTTTCGATGA+AGG + chr5_3:3571240-3571259 Msa0792370:intron 30.0%
AGGTTTCTTGAACATACTTA+CGG + chr5_3:3571333-3571352 Msa0792370:intron 30.0%
! CTTAACAAGGAATTGGTTTA+TGG - chr5_3:3571373-3571392 None:intergenic 30.0%
CAAGCACTAATTCTATTCAT+TGG + chr5_3:3571519-3571538 Msa0792370:intron 30.0%
! AACCCTCATTCAATTTTGTA+GGG + chr5_3:3571662-3571681 Msa0792370:intron 30.0%
ATCCCTACAAAATTGAATGA+GGG - chr5_3:3571667-3571686 None:intergenic 30.0%
TTTCAATTTACCGTTTACTC+TGG - chr5_3:3571697-3571716 None:intergenic 30.0%
AATGCTAAAAGGGGTAAAAT+TGG + chr5_3:3571794-3571813 Msa0792370:intron 30.0%
GGTAAAATTGGAATTTCAGA+TGG + chr5_3:3571806-3571825 Msa0792370:intron 30.0%
ACCAGGTAAAATTTCCTAAA+TGG + chr5_3:3571860-3571879 Msa0792370:intron 30.0%
!! GTTCAATTTTTAAGAAAGGG+AGG + chr5_3:3572060-3572079 Msa0792370:intron 30.0%
!! TCAATTTTTAAGAAAGGGAG+GGG + chr5_3:3572062-3572081 Msa0792370:intron 30.0%
ATCAATCTTTGTGGACTTAA+GGG - chr5_3:3572539-3572558 None:intergenic 30.0%
TATCAATCTTTGTGGACTTA+AGG - chr5_3:3572540-3572559 None:intergenic 30.0%
TCCACAAAGATTGATATATC+TGG + chr5_3:3572544-3572563 Msa0792370:intron 30.0%
ACCAGATATATCAATCTTTG+TGG - chr5_3:3572548-3572567 None:intergenic 30.0%
GTAAAACATCAAAGACATCA+AGG - chr5_3:3572697-3572716 None:intergenic 30.0%
GACTATATGCATTATTCACA+TGG - chr5_3:3572942-3572961 None:intergenic 30.0%
! TCAAACAAGGTCTATCATTT+TGG + chr5_3:3572960-3572979 Msa0792370:intron 30.0%
! CAAACAAGGTCTATCATTTT+GGG + chr5_3:3572961-3572980 Msa0792370:intron 30.0%
! TGGTGATGTAAAATACTTAC+TGG - chr5_3:3573103-3573122 None:intergenic 30.0%
! TTAAAAGTATGGTCGAAAAG+TGG - chr5_3:3573123-3573142 None:intergenic 30.0%
! CATGAGTTGACTTAAAAGTA+TGG - chr5_3:3573134-3573153 None:intergenic 30.0%
CAGAAGTCATTATAAAATGG+AGG - chr5_3:3573398-3573417 None:intergenic 30.0%
! TGAAGTGTTTGGTAAAATAG+CGG + chr5_3:3573542-3573561 Msa0792370:intron 30.0%
ACGAGCTTATAACTTATTTC+AGG - chr5_3:3574329-3574348 None:intergenic 30.0%
TTGACAAAAAAAGCTCTGTT+TGG - chr5_3:3574367-3574386 None:intergenic 30.0%
AAATAAACTAAGGGTCTGTT+TGG - chr5_3:3574441-3574460 None:intergenic 30.0%
TATTTAATGAAGGCTCTGTT+TGG + chr5_3:3574486-3574505 Msa0792370:intron 30.0%
TTGACAAAAAAAGCTCTGTT+TGG - chr5_3:3574367-3574386 None:intergenic 30.0%
!!! AGAGCTAAAAGCTCTTTTTT+TGG + chr5_3:3574818-3574837 Msa0792370:intron 30.0%
CTAATATGAATCTAGTCCAA+TGG + chr5_3:3574868-3574887 Msa0792370:intron 30.0%
TAAAAATACGAGTCTTCCAT+TGG - chr5_3:3574887-3574906 None:intergenic 30.0%
!!! TGGCAAATGCATTTTTTTAG+AGG + chr5_3:3574974-3574993 Msa0792370:intron 30.0%
TAACTATTGTTAGATGACGA+TGG + chr5_3:3575052-3575071 Msa0792370:intron 30.0%
TATAGTGTGACTTTGAATTC+TGG + chr5_3:3575112-3575131 Msa0792370:intron 30.0%
!!! CGATGCTTATTTTTTATAGG+AGG - chr5_3:3575281-3575300 None:intergenic 30.0%
ATACTTAATGCAATGCACTA+AGG + chr5_3:3575617-3575636 Msa0792370:intron 30.0%
! CCATCTAAGGTACAAATTTA+AGG - chr5_3:3576159-3576178 None:intergenic 30.0%
CCTTAAATTTGTACCTTAGA+TGG + chr5_3:3576156-3576175 Msa0792370:intron 30.0%
!!! TTGTTTTTTCTCTCCATCTA+AGG - chr5_3:3576172-3576191 None:intergenic 30.0%
! AAAAACAATGTTTCTGTGTG+TGG + chr5_3:3576184-3576203 Msa0792370:intron 30.0%
! TTGTTATTGAAAGTCCCATA+TGG + chr5_3:3576365-3576384 Msa0792370:intron 30.0%
TGTTATTGAAAGTCCCATAT+GGG + chr5_3:3576366-3576385 Msa0792370:intron 30.0%
! AGTCTTATATGATCCCATAT+GGG - chr5_3:3576382-3576401 None:intergenic 30.0%
! AAGTCTTATATGATCCCATA+TGG - chr5_3:3576383-3576402 None:intergenic 30.0%
! CCATACAAAATTGAGTTGTA+AGG - chr5_3:3576441-3576460 None:intergenic 30.0%
! CCTTACAACTCAATTTTGTA+TGG + chr5_3:3576438-3576457 Msa0792370:intron 30.0%
AATATCATCTTAGAACGGTT+GGG - chr5_3:3576475-3576494 None:intergenic 30.0%
TAATATCATCTTAGAACGGT+TGG - chr5_3:3576476-3576495 None:intergenic 30.0%
! GATATAGGCCTTTAAGAATT+TGG - chr5_3:3576641-3576660 None:intergenic 30.0%
CTTTCCAAGAAGAAAAAGAA+AGG + chr5_3:3576964-3576983 Msa0792370:CDS 30.0%
GAAAGGAAAATTACCTAAAG+AGG + chr5_3:3576981-3577000 Msa0792370:CDS 30.0%
CTAGACAAAAGCTACTTAAT+TGG + chr5_3:3577004-3577023 Msa0792370:CDS 30.0%
ACAAAAGCTACTTAATTGGT+GGG + chr5_3:3577008-3577027 Msa0792370:CDS 30.0%
!!! TTCGCTTTTTTTTATCGGTT+TGG - chr5_3:3577178-3577197 None:intergenic 30.0%
!!! CGGTATTCGCTTTTTTTTAT+CGG - chr5_3:3577183-3577202 None:intergenic 30.0%
CGCAAAAAATCGAATATTCT+TGG + chr5_3:3577201-3577220 Msa0792370:intron 30.0%
CATCACATTGTGGTTTAATT+TGG - chr5_3:3577565-3577584 None:intergenic 30.0%
! GAAGGATATAACTTTGAGAA+AGG - chr5_3:3577610-3577629 None:intergenic 30.0%
TCTCAAAGTTATATCCTTCT+TGG + chr5_3:3577611-3577630 Msa0792370:intron 30.0%
TGGACATATGATCACTATAT+AGG + chr5_3:3577631-3577650 Msa0792370:intron 30.0%
ACCAGAAGCAAATAAATAAC+TGG + chr5_3:3577693-3577712 Msa0792370:CDS 30.0%
ACCAGTTATTTATTTGCTTC+TGG - chr5_3:3577697-3577716 None:intergenic 30.0%
! ATAACTGGTTCATCAATCAA+AGG + chr5_3:3577708-3577727 Msa0792370:CDS 30.0%
TTATATGGATGGTCATTACA+TGG + chr5_3:3577805-3577824 Msa0792370:CDS 30.0%
CGCTTCATATATCATAATCA+TGG - chr5_3:3577854-3577873 None:intergenic 30.0%
TTGAACATTATCACCAATGT+CGG + chr5_3:3577921-3577940 Msa0792370:three_prime_UTR 30.0%
TTATCTTCAATATGAAGCGT+CGG + chr5_3:3577958-3577977 Msa0792370:three_prime_UTR 30.0%
!! TGTGTAGTAACTTTAGTTTG+TGG + chr5_3:3578372-3578391 Msa0792370:three_prime_UTR 30.0%
! ACATCATGTGAAAGTTTTGC+TGG + chr5_3:3566878-3566897 Msa0792370:five_prime_UTR 35.0%
!!! ATAGATTTTGGGCATTGACA+GGG - chr5_3:3566919-3566938 None:intergenic 35.0%
!!! TATAGATTTTGGGCATTGAC+AGG - chr5_3:3566920-3566939 None:intergenic 35.0%
! CTCTCAGCTTCTTAAACTTT+TGG + chr5_3:3566962-3566981 Msa0792370:five_prime_UTR 35.0%
! AGTGTGATTTTGTGTGTGTT+GGG - chr5_3:3567014-3567033 None:intergenic 35.0%
! AAGTGTGATTTTGTGTGTGT+TGG - chr5_3:3567015-3567034 None:intergenic 35.0%
GTGAGAGAGTTAAACGTATA+TGG + chr5_3:3567193-3567212 Msa0792370:five_prime_UTR 35.0%
GCAATGGAGTACAAGAAATT+TGG - chr5_3:3567300-3567319 None:intergenic 35.0%
!! TCAGGTTGAAAACAATTGTC+TGG - chr5_3:3567420-3567439 None:intergenic 35.0%
TGTTGATGTTGTACTTGATC+AGG - chr5_3:3567438-3567457 None:intergenic 35.0%
AAAGCTGGGTAGTGAAAAAT+CGG - chr5_3:3567507-3567526 None:intergenic 35.0%
CATAATCATCATCATCAAGG+AGG + chr5_3:3567564-3567583 Msa0792370:CDS 35.0%
! TTGAGGATGAGCAATGATTT+TGG - chr5_3:3567637-3567656 None:intergenic 35.0%
! AGCTTACATGGATTGTCAAA+AGG + chr5_3:3567674-3567693 Msa0792370:CDS 35.0%
! AACCCTCTTTTTCTCTTGAA+GGG - chr5_3:3567764-3567783 None:intergenic 35.0%
! AAACCCTCTTTTTCTCTTGA+AGG - chr5_3:3567765-3567784 None:intergenic 35.0%
TTCAAGAGAAAAAGAGGGTT+TGG + chr5_3:3567764-3567783 Msa0792370:intron 35.0%
TAGACCAATTCATGGTACAA+GGG + chr5_3:3568079-3568098 Msa0792370:intron 35.0%
!!! TGTGGTTTTAGACGTTGAAA+TGG + chr5_3:3568254-3568273 Msa0792370:intron 35.0%
ATTAACAAGGCCTATACAAG+AGG + chr5_3:3568331-3568350 Msa0792370:CDS 35.0%
AAATCCATAGCCTCTTGTAT+AGG - chr5_3:3568344-3568363 None:intergenic 35.0%
CAGCTAAATACACTTTGCAA+TGG + chr5_3:3568383-3568402 Msa0792370:CDS 35.0%
! AGATAAAGTACTACTCACCA+GGG - chr5_3:3568424-3568443 None:intergenic 35.0%
! AAGATAAAGTACTACTCACC+AGG - chr5_3:3568425-3568444 None:intergenic 35.0%
!! GTTTTGCTGACTAAAAACTC+GGG + chr5_3:3569096-3569115 Msa0792370:intron 35.0%
GACTAAAAACTCGGGTTTAT+CGG + chr5_3:3569104-3569123 Msa0792370:intron 35.0%
! ATCGGTTTCTAAGGATTCAT+TGG + chr5_3:3569122-3569141 Msa0792370:intron 35.0%
! TCGGTTTCTAAGGATTCATT+GGG + chr5_3:3569123-3569142 Msa0792370:intron 35.0%
AGTGATTAAAACGGCATTAG+CGG - chr5_3:3569220-3569239 None:intergenic 35.0%
GCAAATGTTAACCTATGCTT+GGG + chr5_3:3569264-3569283 Msa0792370:intron 35.0%
CAAATGTTAACCTATGCTTG+GGG + chr5_3:3569265-3569284 Msa0792370:intron 35.0%
!! TCAACTGTGTCACTTAACAT+GGG - chr5_3:3569567-3569586 None:intergenic 35.0%
GTCAAACAGGTCATCTAATA+AGG - chr5_3:3569744-3569763 None:intergenic 35.0%
TATGTGTGTCTGAGTTAACT+AGG + chr5_3:3569941-3569960 Msa0792370:intron 35.0%
AATAGTGCACATTGTCAACT+AGG + chr5_3:3570020-3570039 Msa0792370:intron 35.0%
GTCATTTATTGTAGAACGGA+GGG + chr5_3:3570042-3570061 Msa0792370:intron 35.0%
TATAGTTGGCCAATATCAGA+TGG - chr5_3:3570100-3570119 None:intergenic 35.0%
GAAAGTTACTTGTGACATTG+TGG + chr5_3:3570162-3570181 Msa0792370:intron 35.0%
GAGAACTAACTCATGTATGT+TGG - chr5_3:3570230-3570249 None:intergenic 35.0%
AAGTCAAAAGCCATGTTAAC+AGG + chr5_3:3570286-3570305 Msa0792370:intron 35.0%
CTCAAAAACACCTGTTAACA+TGG - chr5_3:3570299-3570318 None:intergenic 35.0%
TGGGTGGTTAAATATAGAGA+CGG + chr5_3:3570911-3570930 Msa0792370:intron 35.0%
TGGTTAAATATAGAGACGGA+GGG + chr5_3:3570915-3570934 Msa0792370:intron 35.0%
TCCGGTCATTTAATGAGATA+TGG - chr5_3:3571063-3571082 None:intergenic 35.0%
GGGTAAAGGAATAATTGTAG+GGG - chr5_3:3571100-3571119 None:intergenic 35.0%
CAGGGTAAAGGAATAATTGT+AGG - chr5_3:3571102-3571121 None:intergenic 35.0%
!!! CCAATGATTTTTCAGGGTAA+AGG - chr5_3:3571114-3571133 None:intergenic 35.0%
CCTTTACCCTGAAAAATCAT+TGG + chr5_3:3571111-3571130 Msa0792370:intron 35.0%
ACTCTACAGGAAATGTTGTA+GGG - chr5_3:3571180-3571199 None:intergenic 35.0%
AACTCTACAGGAAATGTTGT+AGG - chr5_3:3571181-3571200 None:intergenic 35.0%
GATAGCCAATTTCTCTGATA+TGG + chr5_3:3571262-3571281 Msa0792370:intron 35.0%
TGATATGGAAAATTTGGGAG+AGG + chr5_3:3571277-3571296 Msa0792370:intron 35.0%
AAGTATGTTCAAGAAACCTG+CGG - chr5_3:3571332-3571351 None:intergenic 35.0%
! CGGTTTTCTTAACAAGGAAT+TGG - chr5_3:3571380-3571399 None:intergenic 35.0%
!!! TCTCATCGGTTTTCTTAACA+AGG - chr5_3:3571386-3571405 None:intergenic 35.0%
TAAGAAAACCGATGAGAGAA+AGG + chr5_3:3571389-3571408 Msa0792370:intron 35.0%
TGCAATTACCTTTCTCTCAT+CGG - chr5_3:3571400-3571419 None:intergenic 35.0%
TCGAATGAATCTCTCTTGAT+CGG + chr5_3:3571456-3571475 Msa0792370:intron 35.0%
TGAAACAAGGCATGTGAAAA+AGG + chr5_3:3571617-3571636 Msa0792370:intron 35.0%
GAAACAAGGCATGTGAAAAA+GGG + chr5_3:3571618-3571637 Msa0792370:intron 35.0%
! CAACCCTCATTCAATTTTGT+AGG + chr5_3:3571661-3571680 Msa0792370:intron 35.0%
CATCCCTACAAAATTGAATG+AGG - chr5_3:3571668-3571687 None:intergenic 35.0%
! GATGTCATTTCCAGAGTAAA+CGG + chr5_3:3571684-3571703 Msa0792370:intron 35.0%
AGGGTGAAACAAATGCTAAA+AGG + chr5_3:3571783-3571802 Msa0792370:intron 35.0%
GGGTGAAACAAATGCTAAAA+GGG + chr5_3:3571784-3571803 Msa0792370:intron 35.0%
GGTGAAACAAATGCTAAAAG+GGG + chr5_3:3571785-3571804 Msa0792370:intron 35.0%
! TGGAATTTCAGATGGTTTGT+AGG + chr5_3:3571814-3571833 Msa0792370:intron 35.0%
! GGAATTTCAGATGGTTTGTA+GGG + chr5_3:3571815-3571834 Msa0792370:intron 35.0%
! GAATTTCAGATGGTTTGTAG+GGG + chr5_3:3571816-3571835 Msa0792370:intron 35.0%
! GCCATTTAGGAAATTTTACC+TGG - chr5_3:3571864-3571883 None:intergenic 35.0%
TGGTCGATAATTAGTACTCA+AGG - chr5_3:3571933-3571952 None:intergenic 35.0%
!!! TTTGGTTCGAGAGTTTTGAA+GGG + chr5_3:3572003-3572022 Msa0792370:intron 35.0%
GGTTGGAAGTTGTATTATCT+TGG + chr5_3:3572189-3572208 Msa0792370:intron 35.0%
! AAAAACGTGTTTGGTTCACA+AGG - chr5_3:3572456-3572475 None:intergenic 35.0%
GCTCTGTTTGGTAAAAATAG+CGG + chr5_3:3573424-3573443 Msa0792370:intron 35.0%
! GATAAGCTAGTTGAAGTGTT+TGG + chr5_3:3573531-3573550 Msa0792370:intron 35.0%
! GATAAGCTAGTTGAAGTGTT+TGG + chr5_3:3573531-3573550 Msa0792370:intron 35.0%
ACGAGCTTATAGCTTATTTC+AGG - chr5_3:3574727-3574746 None:intergenic 35.0%
TTCTTCACACTTATAGTGTG+TGG + chr5_3:3575144-3575163 Msa0792370:intron 35.0%
TCTTCACACTTATAGTGTGT+GGG + chr5_3:3575145-3575164 Msa0792370:intron 35.0%
AAGCAATTTCTTGACACACA+GGG - chr5_3:3575248-3575267 None:intergenic 35.0%
TAAGCAATTTCTTGACACAC+AGG - chr5_3:3575249-3575268 None:intergenic 35.0%
GTGCAAACGAATTTAATGTC+AGG - chr5_3:3575395-3575414 None:intergenic 35.0%
AGGTCATCCACATGAAATAA+AGG - chr5_3:3575749-3575768 None:intergenic 35.0%
TAGAAGTGATATCGGATACA+AGG - chr5_3:3575774-3575793 None:intergenic 35.0%
GTAAGTCAAAAACCATGCAT+TGG + chr5_3:3576311-3576330 Msa0792370:intron 35.0%
TATTTCACATGACCAATGCA+TGG - chr5_3:3576326-3576345 None:intergenic 35.0%
! CAAAATTGAGTTGTAAGGTG+AGG - chr5_3:3576436-3576455 None:intergenic 35.0%
TGCTATAAGATCTCTCACAT+TGG + chr5_3:3576527-3576546 Msa0792370:intron 35.0%
! GATGATAAAAATGAAGGCGT+TGG + chr5_3:3576802-3576821 Msa0792370:intron 35.0%
!! GCAAGTGGTTTTTCAATTCA+CGG - chr5_3:3576903-3576922 None:intergenic 35.0%
CACTATATTTCTTCAGCAAG+TGG - chr5_3:3576918-3576937 None:intergenic 35.0%
! CACTTGCTGAAGAAATATAG+TGG + chr5_3:3576916-3576935 Msa0792370:CDS 35.0%
GACAAAAGCTACTTAATTGG+TGG + chr5_3:3577007-3577026 Msa0792370:CDS 35.0%
!! TTACAAATGGCCTTATCCTT+CGG + chr5_3:3577038-3577057 Msa0792370:CDS 35.0%
TTATAACGTACCGAAGGATA+AGG - chr5_3:3577051-3577070 None:intergenic 35.0%
!! TGGTTTGGTTCAGTTTAGTT+TGG - chr5_3:3577294-3577313 None:intergenic 35.0%
ATGGAACATACATCACATTG+TGG - chr5_3:3577575-3577594 None:intergenic 35.0%
TAGTGATCATATGTCCAAGA+AGG - chr5_3:3577628-3577647 None:intergenic 35.0%
CACTATATAGGAATCAGAGA+AGG + chr5_3:3577643-3577662 Msa0792370:intron 35.0%
ATAAACTGCATGTCTTCTGA+TGG - chr5_3:3577749-3577768 None:intergenic 35.0%
ATCAGAAGACATGCAGTTTA+TGG + chr5_3:3577748-3577767 Msa0792370:CDS 35.0%
ATCATAATCATGGCCCTAAA+CGG - chr5_3:3577844-3577863 None:intergenic 35.0%
!! GATATATGAAGCGTTGATAC+TGG + chr5_3:3577861-3577880 Msa0792370:three_prime_UTR 35.0%
TGAACATTATCACCAATGTC+GGG + chr5_3:3577922-3577941 Msa0792370:three_prime_UTR 35.0%
GACATGCATAACATGAAACT+TGG + chr5_3:3578123-3578142 Msa0792370:three_prime_UTR 35.0%
AATTACGTACTCCTATACTC+TGG + chr5_3:3578239-3578258 Msa0792370:three_prime_UTR 35.0%
GTGGTTGACAAGACTTTGTT+TGG - chr5_3:3566773-3566792 None:intergenic 40.0%
TTAGAGAGAGAAGAGAGAGT+TGG - chr5_3:3566834-3566853 None:intergenic 40.0%
GAGAGATGAGTGAAGATGAT+TGG - chr5_3:3566947-3566966 None:intergenic 40.0%
TTTGTGTGTGTTGGGGTAAA+GGG - chr5_3:3567006-3567025 None:intergenic 40.0%
! TTTTGTGTGTGTTGGGGTAA+AGG - chr5_3:3567007-3567026 None:intergenic 40.0%
! GTGTGATTTTGTGTGTGTTG+GGG - chr5_3:3567013-3567032 None:intergenic 40.0%
TTCTTGTACTCCATTGCTAG+TGG + chr5_3:3567303-3567322 Msa0792370:CDS 40.0%
! TTGGTTGTTTCCACTAGCAA+TGG - chr5_3:3567316-3567335 None:intergenic 40.0%
!! GTTGATGATTGTGTTGGTGT+TGG - chr5_3:3567353-3567372 None:intergenic 40.0%
AATCATCATCATCAAGGAGG+AGG + chr5_3:3567567-3567586 Msa0792370:CDS 40.0%
! TCTTTTTCTCTTGAAGGGCA+GGG - chr5_3:3567759-3567778 None:intergenic 40.0%
TGCCCTTCAAGAGAAAAAGA+GGG + chr5_3:3567759-3567778 Msa0792370:intron 40.0%
TCCAGAACTAGACCAATTCA+TGG + chr5_3:3568071-3568090 Msa0792370:CDS 40.0%
! ACCATGAATTGGTCTAGTTC+TGG - chr5_3:3568075-3568094 None:intergenic 40.0%
CTAGACCAATTCATGGTACA+AGG + chr5_3:3568078-3568097 Msa0792370:intron 40.0%
AGACCAATTCATGGTACAAG+GGG + chr5_3:3568080-3568099 Msa0792370:intron 40.0%
! TTCGATTTGCACTGTGATGT+CGG + chr5_3:3568195-3568214 Msa0792370:intron 40.0%
CATGCTTGTGAAGTATAGAG+AGG + chr5_3:3568307-3568326 Msa0792370:CDS 40.0%
! TCGAGTGTTTCTGAACATAC+TGG + chr5_3:3568642-3568661 Msa0792370:intron 40.0%
TCTCACATGCTTTCAAATCG+TGG + chr5_3:3568681-3568700 Msa0792370:intron 40.0%
CTCACATGCTTTCAAATCGT+GGG + chr5_3:3568682-3568701 Msa0792370:intron 40.0%
! AATGCTCCCTCTAAAAGGTT+AGG - chr5_3:3568910-3568929 None:intergenic 40.0%
ACAACAATGCTCCCTCTAAA+AGG - chr5_3:3568915-3568934 None:intergenic 40.0%
TAAAACGGAAATCCACACGT+TGG + chr5_3:3568989-3569008 Msa0792370:intron 40.0%
GGCAAATGTTAACCTATGCT+TGG + chr5_3:3569263-3569282 Msa0792370:intron 40.0%
!! ATTCCTTAACTTGTGCCCTT+AGG + chr5_3:3569400-3569419 Msa0792370:intron 40.0%
!! TTCCTTAACTTGTGCCCTTA+GGG + chr5_3:3569401-3569420 Msa0792370:intron 40.0%
CATGTTATCTTGTGCCCTAA+GGG - chr5_3:3569418-3569437 None:intergenic 40.0%
TCATGTTATCTTGTGCCCTA+AGG - chr5_3:3569419-3569438 None:intergenic 40.0%
AAAGTATGTTGGGGTTGGAT+TGG - chr5_3:3569487-3569506 None:intergenic 40.0%
AACTTCAAGTATGTTGGGGT+TGG - chr5_3:3569536-3569555 None:intergenic 40.0%
AGGGAACTTCAAGTATGTTG+GGG - chr5_3:3569540-3569559 None:intergenic 40.0%
GAGGGAACTTCAAGTATGTT+GGG - chr5_3:3569541-3569560 None:intergenic 40.0%
!! GTCAACTGTGTCACTTAACA+TGG - chr5_3:3569568-3569587 None:intergenic 40.0%
ACAGGTCATCTAATAAGGGA+CGG - chr5_3:3569739-3569758 None:intergenic 40.0%
CTAGGTCATCTAATATGGGA+CGG + chr5_3:3569959-3569978 Msa0792370:intron 40.0%
GGTCATTTATTGTAGAACGG+AGG + chr5_3:3570041-3570060 Msa0792370:intron 40.0%
GTTACTTGTGACATTGTGGT+TGG + chr5_3:3570166-3570185 Msa0792370:intron 40.0%
AAGTGTCCTTAGGCACTTAA+GGG - chr5_3:3570478-3570497 None:intergenic 40.0%
TCTTGCTAACAAGTGTCCTT+AGG - chr5_3:3570488-3570507 None:intergenic 40.0%
ATGTTACATTAAGGGACGGA+GGG - chr5_3:3570659-3570678 None:intergenic 40.0%
AGGGATGTTACATTAAGGGA+CGG - chr5_3:3570663-3570682 None:intergenic 40.0%
GTGGTTAAATATAGAGACGG+AGG + chr5_3:3570914-3570933 Msa0792370:intron 40.0%
CTCTACAGGAAATGTTGTAG+GGG - chr5_3:3571179-3571198 None:intergenic 40.0%
TGGCTATCCTTCATCGAAAA+AGG - chr5_3:3571250-3571269 None:intergenic 40.0%
!! ATTTTAGCCATGTTGAACCG+TGG + chr5_3:3571301-3571320 Msa0792370:intron 40.0%
AATCTCTCTTGATCGGTGAT+GGG + chr5_3:3571463-3571482 Msa0792370:intron 40.0%
AGGGGTGAATGTATAAGTGT+TGG + chr5_3:3571834-3571853 Msa0792370:intron 40.0%
GGGGTGAATGTATAAGTGTT+GGG + chr5_3:3571835-3571854 Msa0792370:intron 40.0%
! GGGTGAATGTATAAGTGTTG+GGG + chr5_3:3571836-3571855 Msa0792370:intron 40.0%
! AGAGACATTTAGGGTCTGTT+TGG + chr5_3:3571985-3572004 Msa0792370:intron 40.0%
!! GTTTGGTTCGAGAGTTTTGA+AGG + chr5_3:3572002-3572021 Msa0792370:intron 40.0%
!!! TTGGTTCGAGAGTTTTGAAG+GGG + chr5_3:3572004-3572023 Msa0792370:intron 40.0%
! TTTGGTTCGAGAATTAGGAG+GGG - chr5_3:3572512-3572531 None:intergenic 40.0%
! GTTTGGTTCGAGAATTAGGA+GGG - chr5_3:3572513-3572532 None:intergenic 40.0%
CTCCTAATTCTCGAACCAAA+CGG + chr5_3:3572512-3572531 Msa0792370:intron 40.0%
!!! GTCTATCATTTTGGGACAGT+GGG + chr5_3:3572969-3572988 Msa0792370:intron 40.0%
!! GGTAACACTTTAGCTCTGTT+TGG - chr5_3:3574754-3574773 None:intergenic 40.0%
ATACATTCTTCGGCTCTGTT+TGG - chr5_3:3574848-3574867 None:intergenic 40.0%
! GGCTGTTCCTTTATTTCATG+TGG + chr5_3:3575739-3575758 Msa0792370:intron 40.0%
ACTCTAACGTAGAGTTCAGT+CGG - chr5_3:3576012-3576031 None:intergenic 40.0%
ACTGAACTCTACGTTAGAGT+TGG + chr5_3:3576012-3576031 Msa0792370:intron 40.0%
! ATTTGGGATGAGCCTAACTT+AGG - chr5_3:3576624-3576643 None:intergenic 40.0%
GGCTCATCCCAAATTCTTAA+AGG + chr5_3:3576630-3576649 Msa0792370:intron 40.0%
GAAGAGGATCAAGAGAATAG+TGG + chr5_3:3576832-3576851 Msa0792370:CDS 40.0%
! AGCTTTTGTCTAGCCTCTTT+AGG - chr5_3:3576997-3577016 None:intergenic 40.0%
GGTGGGAATTGCATTACAAA+TGG + chr5_3:3577025-3577044 Msa0792370:CDS 40.0%
GGAGATTTATAACGTACCGA+AGG - chr5_3:3577057-3577076 None:intergenic 40.0%
GAAGAATGTGAGAAGAGAGT+AGG - chr5_3:3577078-3577097 None:intergenic 40.0%
ATTGGCTGAATCAACAGGTT+TGG + chr5_3:3577670-3577689 Msa0792370:CDS 40.0%
GGTTCATCAATCAAAGGAAG+AGG + chr5_3:3577714-3577733 Msa0792370:CDS 40.0%
AGACATGCAGTTTATGGTGA+TGG + chr5_3:3577754-3577773 Msa0792370:CDS 40.0%
!! ATGCAGTTTATGGTGATGGA+TGG + chr5_3:3577758-3577777 Msa0792370:CDS 40.0%
ATATAAAGAGCTGCACTCTG+TGG - chr5_3:3577791-3577810 None:intergenic 40.0%
ACAGAGTGCAGCTCTTTATA+TGG + chr5_3:3577790-3577809 Msa0792370:CDS 40.0%
AGTGCAGCTCTTTATATGGA+TGG + chr5_3:3577794-3577813 Msa0792370:CDS 40.0%
ACCAGCCGTAATTTGAGAAA+TGG + chr5_3:3577893-3577912 Msa0792370:three_prime_UTR 40.0%
TCCATTTCTCAAATTACGGC+TGG - chr5_3:3577897-3577916 None:intergenic 40.0%
GAACATTATCACCAATGTCG+GGG + chr5_3:3577923-3577942 Msa0792370:three_prime_UTR 40.0%
AGTTGTCACTACCAGAGTAT+AGG - chr5_3:3578253-3578272 None:intergenic 40.0%
CTACACACACGACTCATTTA+AGG - chr5_3:3578359-3578378 None:intergenic 40.0%
ACCAGCAATGTCTTGGAGAT+GGG - chr5_3:3566797-3566816 None:intergenic 45.0%
AACCAGCAATGTCTTGGAGA+TGG - chr5_3:3566798-3566817 None:intergenic 45.0%
! TCTCCAAGACATTGCTGGTT+TGG + chr5_3:3566798-3566817 Msa0792370:five_prime_UTR 45.0%
AGTCCAAACCAGCAATGTCT+TGG - chr5_3:3566804-3566823 None:intergenic 45.0%
TTGTGTGTGTTGGGGTAAAG+GGG - chr5_3:3567005-3567024 None:intergenic 45.0%
!! GATTGTGTTGGTGTTGGTGT+TGG - chr5_3:3567347-3567366 None:intergenic 45.0%
ATCATCATCAAGGAGGAGGA+GGG + chr5_3:3567571-3567590 Msa0792370:CDS 45.0%
! CTCTTTTTCTCTTGAAGGGC+AGG - chr5_3:3567760-3567779 None:intergenic 45.0%
CTGCCCTTCAAGAGAAAAAG+AGG + chr5_3:3567758-3567777 Msa0792370:intron 45.0%
TATGTAGATTGGAGCTCCAC+CGG + chr5_3:3567963-3567982 Msa0792370:intron 45.0%
! CTAGGCAAGAGTTTGAAGCA+AGG + chr5_3:3568010-3568029 Msa0792370:CDS 45.0%
GACCAATTCATGGTACAAGG+GGG + chr5_3:3568081-3568100 Msa0792370:intron 45.0%
TACCCCCTTGTACCATGAAT+TGG - chr5_3:3568086-3568105 None:intergenic 45.0%
AAGGCCTATACAAGAGGCTA+TGG + chr5_3:3568337-3568356 Msa0792370:CDS 45.0%
TGTCACTGATGTGTGAGTGA+CGG + chr5_3:3568591-3568610 Msa0792370:intron 45.0%
TTTCAAATCGTGGGAGCAGA+AGG + chr5_3:3568691-3568710 Msa0792370:intron 45.0%
TTCAAATCGTGGGAGCAGAA+GGG + chr5_3:3568692-3568711 Msa0792370:intron 45.0%
!! CTCGGGTTTATCGGTTTCTA+AGG + chr5_3:3569113-3569132 Msa0792370:intron 45.0%
AAACGGCATTAGCGGTAAGA+CGG - chr5_3:3569212-3569231 None:intergenic 45.0%
! ATGTTGGGGTTGGATTGGAA+TGG - chr5_3:3569482-3569501 None:intergenic 45.0%
GGAGGGAACTTCAAGTATGT+TGG - chr5_3:3569542-3569561 None:intergenic 45.0%
!! GTCACTTAACATGGGTTGGA+GGG - chr5_3:3569559-3569578 None:intergenic 45.0%
!! TGTCACTTAACATGGGTTGG+AGG - chr5_3:3569560-3569579 None:intergenic 45.0%
!! CTGTGTCACTTAACATGGGT+TGG - chr5_3:3569563-3569582 None:intergenic 45.0%
GTCATCTAATAAGGGACGGA+GGG - chr5_3:3569735-3569754 None:intergenic 45.0%
GTCATCTAATATGGGACGGA+GGG + chr5_3:3569963-3569982 Msa0792370:intron 45.0%
GAGTAGTACTTGGGTGACAT+TGG + chr5_3:3570064-3570083 Msa0792370:intron 45.0%
GTGCCAATGCCATCTGATAT+TGG + chr5_3:3570088-3570107 Msa0792370:intron 45.0%
TGGCCAATATCAGATGGCAT+TGG - chr5_3:3570094-3570113 None:intergenic 45.0%
CAAGTGTCCTTAGGCACTTA+AGG - chr5_3:3570479-3570498 None:intergenic 45.0%
GATGTTACATTAAGGGACGG+AGG - chr5_3:3570660-3570679 None:intergenic 45.0%
TGTTCAAGAAACCTGCGGTT+TGG - chr5_3:3571327-3571346 None:intergenic 45.0%
GAATCTCTCTTGATCGGTGA+TGG + chr5_3:3571462-3571481 Msa0792370:intron 45.0%
!! TGTATAAGTGTTGGGGTACC+AGG + chr5_3:3571843-3571862 Msa0792370:intron 45.0%
AGAGGATCGTTGCATACTCA+AGG + chr5_3:3571907-3571926 Msa0792370:intron 45.0%
!!! TTCGAGAGTTTTGAAGGGGA+GGG + chr5_3:3572008-3572027 Msa0792370:intron 45.0%
!! TTTTAAGAAAGGGAGGGGAG+AGG + chr5_3:3572067-3572086 Msa0792370:intron 45.0%
! CGTTTGGTTCGAGAATTAGG+AGG - chr5_3:3572514-3572533 None:intergenic 45.0%
! GTCCGTTTGGTTCGAGAATT+AGG - chr5_3:3572517-3572536 None:intergenic 45.0%
!!! GGTCTATCATTTTGGGACAG+TGG + chr5_3:3572968-3572987 Msa0792370:intron 45.0%
ATGTCTCTCGATGTGATGCA+CGG + chr5_3:3575717-3575736 Msa0792370:intron 45.0%
GTGATATCGGATACAAGGTC+AGG - chr5_3:3575769-3575788 None:intergenic 45.0%
GTAGAGTTCAGTCGGAAGTA+AGG - chr5_3:3576004-3576023 None:intergenic 45.0%
GAGGATCAAGAGAATAGTGG+TGG + chr5_3:3576835-3576854 Msa0792370:CDS 45.0%
GGAATCAGAGAAGGTAGCAT+TGG + chr5_3:3577652-3577671 Msa0792370:intron 45.0%
!! GTAGCATTGGCTGAATCAAC+AGG + chr5_3:3577665-3577684 Msa0792370:CDS 45.0%
! TCAATCAAAGGAAGAGGCAC+TGG + chr5_3:3577720-3577739 Msa0792370:CDS 45.0%
GATGGTCATTACATGGCTGA+TGG + chr5_3:3577812-3577831 Msa0792370:CDS 45.0%
AATCATGGCCCTAAACGGTA+GGG - chr5_3:3577839-3577858 None:intergenic 45.0%
TAATCATGGCCCTAAACGGT+AGG - chr5_3:3577840-3577859 None:intergenic 45.0%
! TGGTATTTGGAGTGCTCAGA+AGG + chr5_3:3578392-3578411 Msa0792370:three_prime_UTR 45.0%
!! AATATATATATAAAAAAATG+GGG - chr5_3:3567906-3567925 None:intergenic 5.0%
!! CAATAATAAATATTATTATA+AGG - chr5_3:3572157-3572176 None:intergenic 5.0%
!!! TTATTATTGTTATTATTATT+AGG + chr5_3:3572168-3572187 Msa0792370:intron 5.0%
!!! TTTTATTAAATTATTGTTTT+CGG + chr5_3:3573652-3573671 Msa0792370:intron 5.0%
!! CAATAATAAAAAATAAAAAA+AGG - chr5_3:3575649-3575668 None:intergenic 5.0%
CAGCAATGTCTTGGAGATGG+GGG - chr5_3:3566795-3566814 None:intergenic 50.0%
CCAGCAATGTCTTGGAGATG+GGG - chr5_3:3566796-3566815 None:intergenic 50.0%
GAGAGAGAAGAGAGAGTTGG+TGG - chr5_3:3566831-3566850 None:intergenic 50.0%
!!! GATTTTGGGCATTGACAGGG+TGG - chr5_3:3566916-3566935 None:intergenic 50.0%
!! GTTGGTGTTGGTGTTGGTGT+TGG - chr5_3:3567335-3567354 None:intergenic 50.0%
!! GTTGGTGTTGGTGTTGGTGT+TGG - chr5_3:3567335-3567354 None:intergenic 50.0%
CATCATCATCAAGGAGGAGG+AGG + chr5_3:3567570-3567589 Msa0792370:CDS 50.0%
GCTTCACCACTAGAACTGCT+TGG - chr5_3:3567600-3567619 None:intergenic 50.0%
CACTTTGCAATGGACCCCTT+CGG + chr5_3:3568393-3568412 Msa0792370:CDS 50.0%
GTCACTGATGTGTGAGTGAC+GGG + chr5_3:3568592-3568611 Msa0792370:intron 50.0%
AACATAGAGTCGCCAACGTG+TGG - chr5_3:3569004-3569023 None:intergenic 50.0%
ACACGTTGGCGACTCTATGT+TGG + chr5_3:3569003-3569022 Msa0792370:intron 50.0%
CACGTTGGCGACTCTATGTT+GGG + chr5_3:3569004-3569023 Msa0792370:intron 50.0%
! CAGAACTCAGGAGCTAGCTT+TGG - chr5_3:3569039-3569058 None:intergenic 50.0%
ACCTATGCTTGGGGCTGTTA+AGG + chr5_3:3569274-3569293 Msa0792370:intron 50.0%
TCCTTAACAGCCCCAAGCAT+AGG - chr5_3:3569278-3569297 None:intergenic 50.0%
! TGCCCTAAGGGCACAAGTTA+AGG - chr5_3:3569406-3569425 None:intergenic 50.0%
GGTCATCTAATAAGGGACGG+AGG - chr5_3:3569736-3569755 None:intergenic 50.0%
GGTCATCTAATATGGGACGG+AGG + chr5_3:3569962-3569981 Msa0792370:intron 50.0%
AGAACGGAGGGAGTAGTACT+TGG + chr5_3:3570054-3570073 Msa0792370:intron 50.0%
GAACGGAGGGAGTAGTACTT+GGG + chr5_3:3570055-3570074 Msa0792370:intron 50.0%
CAAGTGCCCTTAAGTGCCTA+AGG + chr5_3:3570469-3570488 Msa0792370:intron 50.0%
GGGGTGCACAGTATAACTTC+CGG - chr5_3:3571081-3571100 None:intergenic 50.0%
!!! GTTCGAGAGTTTTGAAGGGG+AGG + chr5_3:3572007-3572026 Msa0792370:intron 50.0%
!!! TCGAGAGTTTTGAAGGGGAG+GGG + chr5_3:3572009-3572028 Msa0792370:intron 50.0%
! TGTTTGGTTCACAAGGCGAG+GGG - chr5_3:3572449-3572468 None:intergenic 50.0%
! GTGTTTGGTTCACAAGGCGA+GGG - chr5_3:3572450-3572469 None:intergenic 50.0%
TTCGAGAATTAGGAGGGGAG+GGG - chr5_3:3572507-3572526 None:intergenic 50.0%
GTTCGAGAATTAGGAGGGGA+GGG - chr5_3:3572508-3572527 None:intergenic 50.0%
TGTGGACTTAAGGGTCCGTT+TGG - chr5_3:3572530-3572549 None:intergenic 50.0%
CTTCTGTCTTGGGCTCTGTT+TGG + chr5_3:3573412-3573431 Msa0792370:intron 50.0%
TTCTTGACACACAGGGACAC+AGG - chr5_3:3575241-3575260 None:intergenic 50.0%
CATCACATCGAGAGACATGC+GGG - chr5_3:3575715-3575734 None:intergenic 50.0%
GCATCACATCGAGAGACATG+CGG - chr5_3:3575716-3575735 None:intergenic 50.0%
TGTCTCTCGATGTGATGCAC+GGG + chr5_3:3575718-3575737 Msa0792370:intron 50.0%
!! AGGCGTTGGTTCATCAGAAG+AGG + chr5_3:3576816-3576835 Msa0792370:CDS 50.0%
TCTGCTCGAGGATCAATCTC+TGG - chr5_3:3576877-3576896 None:intergenic 50.0%
AATTCACGGTCTTCTGCTCG+AGG - chr5_3:3576889-3576908 None:intergenic 50.0%
CTGATGGTCCCTACCGTTTA+GGG + chr5_3:3577828-3577847 Msa0792370:CDS 50.0%
CATTATCACCAATGTCGGGG+TGG + chr5_3:3577926-3577945 Msa0792370:three_prime_UTR 50.0%
CAATGTCTTGGAGATGGGGG+TGG - chr5_3:3566792-3566811 None:intergenic 55.0%
CCCCATCTCCAAGACATTGC+TGG + chr5_3:3566793-3566812 Msa0792370:five_prime_UTR 55.0%
! GGGAGTCCAAGCAGTTCTAG+TGG + chr5_3:3567591-3567610 Msa0792370:CDS 55.0%
ACCAAACGAGCCACCACTTC+CGG - chr5_3:3567985-3568004 None:intergenic 55.0%
TGGCTCGTTTGGTTGCGTCT+AGG + chr5_3:3567992-3568011 Msa0792370:CDS 55.0%
TCACCAGGGAAGATCCGAAG+GGG - chr5_3:3568410-3568429 None:intergenic 55.0%
CTCACCAGGGAAGATCCGAA+GGG - chr5_3:3568411-3568430 None:intergenic 55.0%
ACTCACCAGGGAAGATCCGA+AGG - chr5_3:3568412-3568431 None:intergenic 55.0%
AATCGTGGGAGCAGAAGGGT+AGG + chr5_3:3568696-3568715 Msa0792370:intron 55.0%
ATCGTGGGAGCAGAAGGGTA+GGG + chr5_3:3568697-3568716 Msa0792370:intron 55.0%
GGTTTGGCCACGGTTCAACA+TGG - chr5_3:3571311-3571330 None:intergenic 55.0%
! AGAAACCTGCGGTTTGGCCA+CGG - chr5_3:3571321-3571340 None:intergenic 55.0%
!!! AGAGTTTTGAAGGGGAGGGG+AGG + chr5_3:3572012-3572031 Msa0792370:intron 55.0%
!!! GAGTTTTGAAGGGGAGGGGA+GGG + chr5_3:3572013-3572032 Msa0792370:intron 55.0%
!!! AGTTTTGAAGGGGAGGGGAG+GGG + chr5_3:3572014-3572033 Msa0792370:intron 55.0%
AAGAAAGGGAGGGGAGAGGA+AGG + chr5_3:3572071-3572090 Msa0792370:intron 55.0%
AGAAAGGGAGGGGAGAGGAA+GGG + chr5_3:3572072-3572091 Msa0792370:intron 55.0%
! CGTGTTTGGTTCACAAGGCG+AGG - chr5_3:3572451-3572470 None:intergenic 55.0%
AGAATTAGGAGGGGAGGGGA+GGG - chr5_3:3572503-3572522 None:intergenic 55.0%
GGTTCGAGAATTAGGAGGGG+AGG - chr5_3:3572509-3572528 None:intergenic 55.0%
TTGACACACAGGGACACAGG+AGG - chr5_3:3575238-3575257 None:intergenic 55.0%
GCTGATGGTCCCTACCGTTT+AGG + chr5_3:3577827-3577846 Msa0792370:CDS 55.0%
TATCACCAATGTCGGGGTGG+TGG + chr5_3:3577929-3577948 Msa0792370:three_prime_UTR 55.0%
!! GGGCATTGACAGGGTGGAGA+AGG - chr5_3:3566910-3566929 None:intergenic 60.0%
GATTGGAGCTCCACCGGAAG+TGG + chr5_3:3567969-3567988 Msa0792370:intron 60.0%
AAACGAGCCACCACTTCCGG+TGG - chr5_3:3567982-3568001 None:intergenic 60.0%
ACCGGAAGTGGTGGCTCGTT+TGG + chr5_3:3567981-3568000 Msa0792370:CDS 60.0%
TTGAACCGTGGCCAAACCGC+AGG + chr5_3:3571313-3571332 Msa0792370:intron 60.0%
TTGGTTCACAAGGCGAGGGG+AGG - chr5_3:3572446-3572465 None:intergenic 60.0%
GAATTAGGAGGGGAGGGGAG+GGG - chr5_3:3572502-3572521 None:intergenic 60.0%
GAGAATTAGGAGGGGAGGGG+AGG - chr5_3:3572504-3572523 None:intergenic 60.0%
! ACCAATGTCGGGGTGGTGGT+TGG + chr5_3:3577933-3577952 Msa0792370:three_prime_UTR 60.0%
TCCAACCACCACCCCGACAT+TGG - chr5_3:3577937-3577956 None:intergenic 60.0%
TGGAGCTCCACCGGAAGTGG+TGG + chr5_3:3567972-3567991 Msa0792370:CDS 65.0%
GGACCCCTTCGGATCTTCCC+TGG + chr5_3:3568404-3568423 Msa0792370:CDS 65.0%
TAGGAGGGGAGGGGAGGGGA+GGG - chr5_3:3572498-3572517 None:intergenic 70.0%
TTAGGAGGGGAGGGGAGGGG+AGG - chr5_3:3572499-3572518 None:intergenic 70.0%
GGGAGGGGAGGGGAGGGAAG+GGG - chr5_3:3572492-3572511 None:intergenic 75.0%
GGGGAGGGGAGGGGAGGGAA+GGG - chr5_3:3572493-3572512 None:intergenic 75.0%
AGGGGAGGGGAGGGGAGGGA+AGG - chr5_3:3572494-3572513 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 3566768 3578464 3566768 ID=Msa0792370;Name=Msa0792370
chr5_3 mRNA 3566768 3578464 3566768 ID=Msa0792370-mRNA-1;Parent=Msa0792370;Name=Msa0792370-mRNA-1;_AED=0.00;_eAED=0.00;_QI=478|1|1|1|1|1|5|608|388
chr5_3 exon 3566768 3567695 3566768 ID=Msa0792370-mRNA-1:exon:1568;Parent=Msa0792370-mRNA-1
chr5_3 exon 3567970 3568092 3567970 ID=Msa0792370-mRNA-1:exon:1569;Parent=Msa0792370-mRNA-1
chr5_3 exon 3568293 3568425 3568293 ID=Msa0792370-mRNA-1:exon:1570;Parent=Msa0792370-mRNA-1
chr5_3 exon 3576803 3577059 3576803 ID=Msa0792370-mRNA-1:exon:1571;Parent=Msa0792370-mRNA-1
chr5_3 exon 3577653 3578464 3577653 ID=Msa0792370-mRNA-1:exon:1572;Parent=Msa0792370-mRNA-1
chr5_3 five_prime_UTR 3566768 3567245 3566768 ID=Msa0792370-mRNA-1:five_prime_utr;Parent=Msa0792370-mRNA-1
chr5_3 CDS 3567246 3567695 3567246 ID=Msa0792370-mRNA-1:cds;Parent=Msa0792370-mRNA-1
chr5_3 CDS 3567970 3568092 3567970 ID=Msa0792370-mRNA-1:cds;Parent=Msa0792370-mRNA-1
chr5_3 CDS 3568293 3568425 3568293 ID=Msa0792370-mRNA-1:cds;Parent=Msa0792370-mRNA-1
chr5_3 CDS 3576803 3577059 3576803 ID=Msa0792370-mRNA-1:cds;Parent=Msa0792370-mRNA-1
chr5_3 CDS 3577653 3577856 3577653 ID=Msa0792370-mRNA-1:cds;Parent=Msa0792370-mRNA-1
chr5_3 three_prime_UTR 3577857 3578464 3577857 ID=Msa0792370-mRNA-1:three_prime_utr;Parent=Msa0792370-mRNA-1
Gene Sequence

>Msa0792370

ATGGAGGAATACACTAATAATCCAAATCCAAATTCAAATCAAAGTTCTAGGCCAAATTTCTTGTACTCCATTGCTAGTGGAAACAACCAACACCAACACCAACACCAACACCAACACAATCATCAACATAATCAGATTCCAATGAACAACTTTCATCTTCAATCAAGTGGACCAGACAATTGTTTTCAACCTGATCAAGTACAACATCAACACTCTGCTGTGAAAACTGAAGCAAATAGTACTTCACAACTTCACACTCCGATTTTTCACTACCCAGCTTTAATGAGAACAAATATTATTCCACACACCAATATTATGCATAATCATCATCATCAAGGAGGAGGAGGGAGTCCAAGCAGTTCTAGTGGTGAAGCTGAAGCTATAAAAGCCAAAATCATTGCTCATCCTCAATACTCTAGTCTTTTACAAGCTTACATGGATTGTCAAAAGATTGGAGCTCCACCGGAAGTGGTGGCTCGTTTGGTTGCGTCTAGGCAAGAGTTTGAAGCAAGGCAAAGATCTTCAGTTAACTCAAGAGAAGCTTCTAAAGATCCAGAACTAGACCAATTCATGGAAGCATATTATGACATGCTTGTGAAGTATAGAGAGGAATTAACAAGGCCTATACAAGAGGCTATGGATTTCATGAGAAGAATAGAAACTCAGCTAAATACACTTTGCAATGGACCCCTTCGGATCTTCCCTGATGATAAAAATGAAGGCGTTGGTTCATCAGAAGAGGATCAAGAGAATAGTGGTGGAGAAACAGATCAACTTCCAGAGATTGATCCTCGAGCAGAAGACCGTGAATTGAAAAACCACTTGCTGAAGAAATATAGTGGTTACTTGAGTAGTCTTAAGCAAGAACTTTCCAAGAAGAAAAAGAAAGGAAAATTACCTAAAGAGGCTAGACAAAAGCTACTTAATTGGTGGGAATTGCATTACAAATGGCCTTATCCTTCGGAATCAGAGAAGGTAGCATTGGCTGAATCAACAGGTTTGGACCAGAAGCAAATAAATAACTGGTTCATCAATCAAAGGAAGAGGCACTGGAAACCATCAGAAGACATGCAGTTTATGGTGATGGATGGACTGCATCCACAGAGTGCAGCTCTTTATATGGATGGTCATTACATGGCTGATGGTCCCTACCGTTTAGGGCCATGA
Protein sequence

>Msa0792370

MEEYTNNPNPNSNQSSRPNFLYSIASGNNQHQHQHQHQHNHQHNQIPMNNFHLQSSGPDNCFQPDQVQHQHSAVKTEANSTSQLHTPIFHYPALMRTNIIPHTNIMHNHHHQGGGGSPSSSSGEAEAIKAKIIAHPQYSSLLQAYMDCQKIGAPPEVVARLVASRQEFEARQRSSVNSREASKDPELDQFMEAYYDMLVKYREELTRPIQEAMDFMRRIETQLNTLCNGPLRIFPDDKNEGVGSSEEDQENSGGETDQLPEIDPRAEDRELKNHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQKLLNWWELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLHPQSAALYMDGHYMADGPYRLGP*