AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0320470


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0320470 MtrunA17_Chr2g0295671 92.468 770 9 1 1 770 1 721 0.0 1431
Msa0320470 MtrunA17_Chr4g0067521 77.344 768 125 1 3 770 5 723 0.0 1223
Msa0320470 MtrunA17_Chr6g0485841 54.271 761 297 2 1 761 1 710 0.0 827
Msa0320470 MtrunA17_Chr8g0360311 30.142 282 190 5 357 634 4 282 1.81e-32 127
Msa0320470 MtrunA17_Chr4g0055741 36.269 193 118 4 11 200 49 239 4.66e-26 109
Msa0320470 MtrunA17_Chr4g0068451 32.973 185 118 3 14 197 15 194 5.29e-21 93.6
Msa0320470 MtrunA17_Chr3g0122861 30.409 171 104 4 21 180 24 190 5.33e-18 85.1
Msa0320470 MtrunA17_Chr8g0337981 32.639 144 92 4 17 156 22 164 2.59e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0320470 AT3G06860.1 73.212 769 156 2 3 770 6 725 0.0 1131
Msa0320470 AT4G29010.1 53.907 755 299 1 8 762 9 714 0.0 809
Msa0320470 AT3G15290.1 29.078 282 195 3 356 634 3 282 1.16e-33 131
Msa0320470 AT4G16800.1 34.694 196 123 3 11 203 50 243 1.82e-25 107
Msa0320470 AT3G15290.2 29.333 225 154 3 413 634 1 223 3.57e-25 105
Msa0320470 AT5G43280.2 32.370 173 105 2 20 180 24 196 3.47e-21 93.2
Msa0320470 AT4G16210.1 32.143 196 127 3 14 208 18 208 1.23e-20 92.8
Msa0320470 AT5G43280.1 32.370 173 105 2 20 180 24 196 1.29e-20 93.2
Msa0320470 AT1G60550.1 28.718 195 128 5 13 201 85 274 5.49e-13 71.6

Find 223 sgRNAs with CRISPR-Local

Find 583 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCTTGTTATAGAGGTTTA+TGG 0.171851 2_4:+20983646 Msa0320470:three_prime_UTR
CTTCAAGCCCTCTGCCTATT+TGG 0.200505 2_4:+20982915 Msa0320470:CDS
TCTAGTGTTTCAGAGTTTAA+AGG 0.200566 2_4:+20976130 Msa0320470:intron
GAATGCCCATGGGACCTTTC+AGG 0.208356 2_4:+20981653 Msa0320470:CDS
ATAGCAACTGCTTTAATTCT+TGG 0.228772 2_4:+20980301 Msa0320470:CDS
GAGAAGTCTAGGAACATTTC+TGG 0.240635 2_4:+20982110 Msa0320470:CDS
AGCAAAGATCTGTTGCTTTA+AGG 0.248253 2_4:-20980719 None:intergenic
GAATGGGCTTTCCACCTTAC+AGG 0.253342 2_4:+20982728 Msa0320470:CDS
TTAGGGGAGGTATCATATTC+TGG 0.255795 2_4:+20982824 Msa0320470:intron
ACTAATAATACCTGAAGAAA+TGG 0.270028 2_4:-20980852 None:intergenic
TTCCGCTTTGATTGCCTTTG+AGG 0.274258 2_4:-20978616 None:intergenic
TCTTGATATTTCAGCTGTTA+TGG 0.275414 2_4:+20982705 Msa0320470:CDS
AACATGGCTGCTTGTGTATA+TGG 0.276426 2_4:-20981574 None:intergenic
TTAATCTCTTGGAAGAGATT+TGG 0.277351 2_4:-20983553 None:intergenic
TTGATTGACCTCGTTGGTTT+TGG 0.289662 2_4:+20981755 Msa0320470:CDS
GCAAGGGAAATTCTGTTATA+AGG 0.293194 2_4:+20979626 Msa0320470:intron
AATTAAAGCAGTTGCTATTC+CGG 0.300104 2_4:-20980296 None:intergenic
TTTACTTCTTTCAAGATAAC+AGG 0.300630 2_4:-20980331 None:intergenic
CGTAAACGATGTTTGTATAT+TGG 0.300823 2_4:-20974679 None:intergenic
GTAGTTGACTTGCTAGATAT+TGG 0.301850 2_4:+20981481 Msa0320470:CDS
TACCTTCTATAGTATTAGTT+TGG 0.304893 2_4:-20977608 None:intergenic
GGTTCCTAGACAAGTGAAAA+AGG 0.307004 2_4:+20980243 Msa0320470:CDS
GATAAGGCAGTAACTAAGTT+TGG 0.307330 2_4:+20981631 Msa0320470:CDS
GTCAAGGCAATTGTTGTTAC+AGG 0.310412 2_4:+20976185 Msa0320470:CDS
CTTGATATTTCAGCTGTTAT+GGG 0.317805 2_4:+20982706 Msa0320470:CDS
CTCTGTTAACACCTGCTTCC+AGG 0.318195 2_4:-20980363 None:intergenic
TGCCATTGACGGCCTTGCCT+TGG 0.319213 2_4:+20977734 Msa0320470:CDS
GCGGAAGAAGCTCATAGTTT+GGG 0.320841 2_4:+20978633 Msa0320470:CDS
AATCCTTGGCGGAGGACTAA+TGG 0.322869 2_4:+20980270 Msa0320470:CDS
GCAGGTGTTAACAGAGTTAA+AGG 0.324044 2_4:+20980370 Msa0320470:CDS
CTCTCAACGAGGAACATCTA+AGG 0.329114 2_4:+20979067 Msa0320470:CDS
GCTGAATGGTCAAAACTATA+TGG 0.329548 2_4:+20982886 Msa0320470:CDS
GGCGAAAGGACACACTGTTT+TGG 0.337914 2_4:+20974799 Msa0320470:CDS
GGCACATGTTATGCCACTTC+TGG 0.341446 2_4:+20981423 Msa0320470:CDS
TTGTTGGAGCCCATTTCTTC+AGG 0.348907 2_4:+20980842 Msa0320470:CDS
TGACGGCCTTGCCTTGGGTG+GGG 0.352322 2_4:+20977740 Msa0320470:CDS
GCCATTGACGGCCTTGCCTT+GGG 0.357245 2_4:+20977735 Msa0320470:CDS
CAGGAAGCTGAAGCCTTTGA+AGG 0.361377 2_4:+20978999 Msa0320470:intron
GTACTGGATTTGCTGTTAAT+AGG 0.361747 2_4:+20981542 Msa0320470:CDS
TCCTAATCTTAAGCACCCTT+TGG 0.362481 2_4:+20978836 Msa0320470:CDS
TGCATTTGGCCTAATACAAA+AGG 0.367285 2_4:+20977457 Msa0320470:CDS
AGCGGAAGAAGCTCATAGTT+TGG 0.367911 2_4:+20978632 Msa0320470:CDS
CGCATATTCATTCATATTGA+AGG 0.370241 2_4:+20974752 Msa0320470:five_prime_UTR
ATTTAGTATTCTTTCCAATC+AGG 0.370365 2_4:-20980807 None:intergenic
TCAATATAATTCTTCAACTC+TGG 0.382949 2_4:-20982089 None:intergenic
TAAATGATTTCTTGTTATAG+AGG 0.384492 2_4:+20983639 Msa0320470:three_prime_UTR
GCAGTGCTCACCAACTTATC+AGG 0.385840 2_4:-20978678 None:intergenic
TTGACGGCCTTGCCTTGGGT+GGG 0.389024 2_4:+20977739 Msa0320470:CDS
CAGAGACTTCCTCGTCTTGT+TGG 0.389480 2_4:+20978448 Msa0320470:CDS
GACGGCCTTGCCTTGGGTGG+GGG 0.392887 2_4:+20977741 Msa0320470:CDS
CTTCAACTTGGAGTAATTCC+TGG 0.394485 2_4:+20977919 Msa0320470:CDS
ATATTCTGGGCTGACTCTCT+TGG 0.394635 2_4:+20982838 Msa0320470:CDS
GGCAGCTCTTGCAGCCAAAT+AGG 0.396795 2_4:-20982929 None:intergenic
ATCCTTGGCGGAGGACTAAT+GGG 0.401282 2_4:+20980271 Msa0320470:CDS
ATTTCAGCTGTTATGGGAAT+GGG 0.401340 2_4:+20982712 Msa0320470:CDS
TCCTCGCATGAACAGGTACC+TGG 0.403270 2_4:+20980202 Msa0320470:intron
ATTACTCCAAGTTGAAGTTC+AGG 0.403692 2_4:-20977913 None:intergenic
CTCCAAACTAATACTATAGA+AGG 0.406695 2_4:+20977606 Msa0320470:CDS
GGCCTAATACAAAAGGGATT+AGG 0.408978 2_4:+20977464 Msa0320470:CDS
ACTAACACAGATTAATCTCT+TGG 0.409993 2_4:-20983564 None:intergenic
TTTGAAGCTTTCATAGTCAA+TGG 0.412725 2_4:-20980551 None:intergenic
CAAGATATATCATGTGTGAT+AGG 0.418853 2_4:+20979445 Msa0320470:CDS
TCCCCGTGCAGGACTCTTGA+AGG 0.425492 2_4:+20978896 Msa0320470:CDS
CTTCTTTCCTGTGGTGAATG+AGG 0.429015 2_4:+20982639 Msa0320470:CDS
TAATTCTTCAACTCTGGATC+AGG 0.432685 2_4:-20982083 None:intergenic
ACAATCGACTTGAACCTGAT+TGG 0.437666 2_4:+20980793 Msa0320470:CDS
CTGTGGTGAATGAGGCCTGC+CGG 0.439100 2_4:+20982647 Msa0320470:CDS
GTGGTAGTTGGAAATTGTAC+TGG 0.450260 2_4:+20981526 Msa0320470:CDS
TTACAAAGCCGTGTCAAGAA+AGG 0.454138 2_4:+20980478 Msa0320470:CDS
ATTGACGGCCTTGCCTTGGG+TGG 0.454639 2_4:+20977738 Msa0320470:CDS
GGTGAGCACTGCTCGCCAAT+GGG 0.456730 2_4:+20978689 Msa0320470:CDS
TATTTCAGCTGTTATGGGAA+TGG 0.457742 2_4:+20982711 Msa0320470:CDS
AGCTGAAGCCTTTGAAGGAC+TGG 0.459095 2_4:+20979004 Msa0320470:CDS
GAGGTTGAAGGAAGAGAGAA+AGG 0.461139 2_4:+20979648 Msa0320470:CDS
CTGACAAAATAGAATCCCTT+GGG 0.461433 2_4:+20978763 Msa0320470:CDS
TGGTGAGCACTGCTCGCCAA+TGG 0.462431 2_4:+20978688 Msa0320470:CDS
CCAAAACTCAAGCGCAAAAG+CGG 0.467436 2_4:+20978811 Msa0320470:CDS
TTCTGTTATAAGGAGGTTGA+AGG 0.468341 2_4:+20979636 Msa0320470:CDS
ACTTCCTCGTCTTGTTGGCC+TGG 0.468372 2_4:+20978453 Msa0320470:CDS
TTTCATGTTGCAGGGTGCCT+CGG 0.468952 2_4:+20983391 Msa0320470:intron
ATTGATTTGTAAGTTCGCTC+AGG 0.469812 2_4:-20981818 None:intergenic
ATTGAACATGGAATAGTTGC+TGG 0.470352 2_4:+20978873 Msa0320470:CDS
AAATCTGAAGACCGGATTGT+TGG 0.471151 2_4:+20980826 Msa0320470:CDS
TATGTTCCTATCCTTTGAAA+GGG 0.472582 2_4:-20983518 None:intergenic
TTATGTTCCTATCCTTTGAA+AGG 0.473371 2_4:-20983519 None:intergenic
CTAATAATACCTGAAGAAAT+GGG 0.474108 2_4:-20980851 None:intergenic
TGGTGTCTCTGTGGATCCTA+AGG 0.475651 2_4:+20982130 Msa0320470:CDS
TATACTCAAGATTGGCTGAA+TGG 0.476205 2_4:+20982872 Msa0320470:CDS
CAAGTACATATACTCAAGAT+TGG 0.477197 2_4:+20982864 Msa0320470:CDS
CCTACGGTTGCTGCCATTGA+CGG 0.478877 2_4:+20977723 Msa0320470:CDS
ATAGTTGCTGGTCCCCGTGC+AGG 0.482614 2_4:+20978885 Msa0320470:CDS
TAGGGGAGGTATCATATTCT+GGG 0.484793 2_4:+20982825 Msa0320470:intron
TGGGGTTACCGATCGTGGAT+TGG 0.487151 2_4:+20980222 Msa0320470:CDS
TTTAGTGTCACCTGATAAGT+TGG 0.490385 2_4:+20978668 Msa0320470:CDS
AGAAGTGGCATAACATGTGC+CGG 0.490895 2_4:-20981421 None:intergenic
TGTGGTGAATGAGGCCTGCC+GGG 0.491454 2_4:+20982648 Msa0320470:CDS
ACCCAAGGCAAGGCCGTCAA+TGG 0.492221 2_4:-20977736 None:intergenic
TCGTCTTGTTGGCCTGGCAA+AGG 0.493961 2_4:+20978459 Msa0320470:CDS
CAATCTTGAGTATATGTACT+TGG 0.493998 2_4:-20982863 None:intergenic
GCCTGCCGGGTCCTTGATGA+AGG 0.495917 2_4:+20982661 Msa0320470:CDS
AGATGTGGACCTGGTTATAG+AGG 0.496209 2_4:+20980573 Msa0320470:CDS
AGGCAAACCTAGCTGAGCAC+TGG 0.496395 2_4:-20977893 None:intergenic
AGAATTATATTGAGAAGTCT+AGG 0.499743 2_4:+20982099 Msa0320470:CDS
CAAAACTCAAGCGCAAAAGC+GGG 0.502685 2_4:+20978812 Msa0320470:CDS
TCATCTCAAGTGCCTTTGCC+AGG 0.502826 2_4:-20978471 None:intergenic
GGCGGAGGACTAATGGGCTC+CGG 0.504928 2_4:+20980277 Msa0320470:CDS
AGGAAAACTCCAGTGGTAGT+TGG 0.505966 2_4:+20981514 Msa0320470:CDS
GCTTGTAAAACTATCAGAAA+AGG 0.506161 2_4:+20982600 Msa0320470:intron
AGAAATGGGCTCCAACAATC+CGG 0.506846 2_4:-20980837 None:intergenic
AGATGTTTATCAAATTGATA+AGG 0.508427 2_4:+20981615 Msa0320470:CDS
CAAGAAAGGGCAAATGACTA+AGG 0.511387 2_4:+20980492 Msa0320470:CDS
ACCAAAGGGTGCTTAAGATT+AGG 0.513289 2_4:-20978837 None:intergenic
TCTTTCCCCTTTCAAAGGAT+AGG 0.513571 2_4:+20983512 Msa0320470:three_prime_UTR
TACAAAGCCGTGTCAAGAAA+GGG 0.515065 2_4:+20980479 Msa0320470:CDS
TAGATATTGGAAGGAAGATA+AGG 0.515478 2_4:+20981494 Msa0320470:CDS
TATCCTCTTGCATAAGTGGA+AGG 0.518919 2_4:-20981844 None:intergenic
GCCTTCATCAAGGACCCGGC+AGG 0.519276 2_4:-20982662 None:intergenic
GCATTTGGCCTAATACAAAA+GGG 0.521014 2_4:+20977458 Msa0320470:CDS
GGTTTGCCTGAACTTCAACT+TGG 0.523751 2_4:+20977907 Msa0320470:CDS
ACTGACAAAATAGAATCCCT+TGG 0.524121 2_4:+20978762 Msa0320470:CDS
GGCAAACCTAGCTGAGCACT+GGG 0.524634 2_4:-20977892 None:intergenic
TTTGGCTGCAAGAGCTGCCA+AGG 0.528047 2_4:+20982933 Msa0320470:CDS
TGTATTGATGTTATTGAACA+TGG 0.528293 2_4:+20978861 Msa0320470:CDS
AGTTCTATTGATATCAAACC+AGG 0.528738 2_4:-20977585 None:intergenic
ATGGATGAGACAAACCTGTA+AGG 0.529918 2_4:-20982742 None:intergenic
GGAGTAATTCCTGGAGGTGG+AGG 0.530967 2_4:+20977928 Msa0320470:CDS
TCCAAGTATTAATACCTGAA+AGG 0.533618 2_4:-20981667 None:intergenic
ACATGGCTGCTTGTGTATAT+GGG 0.533793 2_4:-20981573 None:intergenic
AATCAGGTTCAAGTCGATTG+TGG 0.534371 2_4:-20980791 None:intergenic
TAACTGCAATGCCTTCATCA+AGG 0.536095 2_4:-20982672 None:intergenic
TAACATCAATACAAACCAAA+GGG 0.541855 2_4:-20978851 None:intergenic
ATATCTCTCTTGCTTCCCCA+AGG 0.542922 2_4:-20978779 None:intergenic
CGACGCCACCAGTCCTTCAA+AGG 0.543636 2_4:-20979012 None:intergenic
AACCTTCAAGAGTCCTGCAC+GGG 0.552011 2_4:-20978898 None:intergenic
GGTACCTTTGAGAAGAGAGA+TGG 0.552600 2_4:-20980530 None:intergenic
TCATCCATACCTCCACCTCC+AGG 0.553219 2_4:-20977937 None:intergenic
ATGCAAGAGGATAAAAGAGC+AGG 0.553470 2_4:+20981854 Msa0320470:CDS
TTTGTACGATGATAAACGTA+GGG 0.553744 2_4:+20982055 Msa0320470:CDS
TTGATTTGTAAGTTCGCTCA+GGG 0.555002 2_4:-20981817 None:intergenic
TCAAAAGAGAGAGAATTGAC+AGG 0.555071 2_4:-20974866 None:intergenic
AACTAAGTTTGGAATGCCCA+TGG 0.555397 2_4:+20981642 Msa0320470:CDS
CGTGGACCGTCGACGACCAT+GGG 0.556229 2_4:+20978722 Msa0320470:CDS
CCTCGCATGAACAGGTACCT+GGG 0.556545 2_4:+20980203 Msa0320470:intron
TTTACAATTGAAGACCTCAA+AGG 0.556818 2_4:+20978602 Msa0320470:intron
TCATTTGCCCTTTCTTGACA+CGG 0.557977 2_4:-20980486 None:intergenic
GAAATTCTCAATAAATTGCA+TGG 0.563315 2_4:-20981795 None:intergenic
CCGTCAATGGCAGCAACCGT+AGG 0.563859 2_4:-20977723 None:intergenic
CTTGGAGTAATTCCTGGAGG+TGG 0.564243 2_4:+20977925 Msa0320470:CDS
TTGACTTGCTAGATATTGGA+AGG 0.564548 2_4:+20981485 Msa0320470:CDS
GCCATGTTTCTTATTGAACA+TGG 0.566980 2_4:+20981589 Msa0320470:CDS
TGAAGGTTGATTGACCTCGT+TGG 0.567282 2_4:+20981749 Msa0320470:intron
CAATGCCTTCATCAAGGACC+CGG 0.567719 2_4:-20982666 None:intergenic
TCTTGCAGCCAAATAGGCAG+AGG 0.568010 2_4:-20982923 None:intergenic
AGGATTGACGATGGTGATGA+TGG 0.573322 2_4:-20974843 None:intergenic
GATCCTTCCACTTATGCAAG+AGG 0.573838 2_4:+20981841 Msa0320470:CDS
TTGAATGTGACAGCTTGCAA+TGG 0.575097 2_4:-20979402 None:intergenic
TCTTACCAATGGAATCCCCT+TGG 0.578031 2_4:-20982950 None:intergenic
AGAATACTAAATCTGAAGAC+CGG 0.579769 2_4:+20980818 Msa0320470:CDS
CTTTGAAGGACTGGTGGCGT+CGG 0.581262 2_4:+20979013 Msa0320470:CDS
CATGTTGCAGGGTGCCTCGG+TGG 0.583050 2_4:+20983394 Msa0320470:intron
GTACAATTTCCAACTACCAC+TGG 0.584412 2_4:-20981523 None:intergenic
AGCTGCCAAGGGGATTCCAT+TGG 0.586048 2_4:+20982945 Msa0320470:CDS
AAGGTTGCAATCCTTGGCGG+AGG 0.587973 2_4:+20980262 Msa0320470:CDS
GAACATTTCTGGTGTCTCTG+TGG 0.588565 2_4:+20982121 Msa0320470:CDS
AGAGATGATCTTCTTTCCTG+TGG 0.589302 2_4:+20982630 Msa0320470:CDS
TCACAAGAGAGAAGATGTCA+AGG 0.591944 2_4:+20976169 Msa0320470:CDS
GTACGTACAATCTCCAGAAG+TGG 0.593014 2_4:-20981436 None:intergenic
GAAGTGGCATAACATGTGCC+GGG 0.593082 2_4:-20981420 None:intergenic
TATACAGGGGATACAAAGCC+TGG 0.593274 2_4:+20977567 Msa0320470:intron
CTATGAAAGCTTCAAAGATG+TGG 0.593523 2_4:+20980558 Msa0320470:CDS
TATCTCTCTTGCTTCCCCAA+GGG 0.594221 2_4:-20978778 None:intergenic
CGGCAGGCCTCATTCACCAC+AGG 0.595221 2_4:-20982646 None:intergenic
GTTACTGTAACAGGTGCGAA+GGG 0.596947 2_4:+20977407 Msa0320470:intron
AAAACCATCTCTCTTCTCAA+AGG 0.599382 2_4:+20980526 Msa0320470:CDS
CGGAAGAAGCTCATAGTTTG+GGG 0.600236 2_4:+20978634 Msa0320470:CDS
ACAGGTGAAGCAACTCGCAA+AGG 0.600741 2_4:+20982026 Msa0320470:intron
TCGTGGACCGTCGACGACCA+TGG 0.603011 2_4:+20978721 Msa0320470:CDS
ATAACATCAATACAAACCAA+AGG 0.603172 2_4:-20978852 None:intergenic
TTAATACCTGAAAGGTCCCA+TGG 0.604478 2_4:-20981659 None:intergenic
CCTCAAGTACCTCTATAACC+AGG 0.604578 2_4:-20980582 None:intergenic
TGTTACTGTAACAGGTGCGA+AGG 0.604940 2_4:+20977406 Msa0320470:intron
TTGGCTGCAAGAGCTGCCAA+GGG 0.609493 2_4:+20982934 Msa0320470:CDS
TTTAGCGGGAAGGAAGCCTA+CGG 0.609778 2_4:+20977707 Msa0320470:intron
ATGTTCCTATCCTTTGAAAG+GGG 0.611146 2_4:-20983517 None:intergenic
ATTTGTACGATGATAAACGT+AGG 0.612093 2_4:+20982054 Msa0320470:CDS
CCACGATATCTAGAGCCCAT+TGG 0.614387 2_4:-20978704 None:intergenic
GATGAGACAAACCTGTAAGG+TGG 0.615518 2_4:-20982739 None:intergenic
CTTGCAGCCAAATAGGCAGA+GGG 0.616670 2_4:-20982922 None:intergenic
GTACCTGGGGTTACCGATCG+TGG 0.619071 2_4:+20980217 Msa0320470:CDS
CAAACCTAGCTGAGCACTGG+GGG 0.619654 2_4:-20977890 None:intergenic
CCAATGGGCTCTAGATATCG+TGG 0.621736 2_4:+20978704 Msa0320470:CDS
AGGGAAATTCTGTTATAAGG+AGG 0.623283 2_4:+20979629 Msa0320470:intron
ATATTCATTCATATTGAAGG+AGG 0.624145 2_4:+20974755 Msa0320470:five_prime_UTR
ACCATGTTCAATAAGAAACA+TGG 0.626221 2_4:-20981590 None:intergenic
TATAACAGGCATGCACTGCA+CGG 0.626383 2_4:+20977860 Msa0320470:intron
AAAGGCACTTGAGATGATGC+TGG 0.627294 2_4:+20978477 Msa0320470:CDS
AAGCTTCAAAGATGTGGACC+TGG 0.628857 2_4:+20980564 Msa0320470:CDS
ACTAAGTTTGGAATGCCCAT+GGG 0.629436 2_4:+20981643 Msa0320470:CDS
AGCCCATTAGTCCTCCGCCA+AGG 0.632377 2_4:-20980273 None:intergenic
TGAAGCCTTTGAAGGACTGG+TGG 0.633696 2_4:+20979007 Msa0320470:CDS
ATAACTGAATCAATGGCGAA+AGG 0.633885 2_4:+20974785 Msa0320470:exon
TCTAGGAACCAATCCACGAT+CGG 0.638845 2_4:-20980230 None:intergenic
CTCGCATGAACAGGTACCTG+GGG 0.638862 2_4:+20980204 Msa0320470:intron
AATCCACGATCGGTAACCCC+AGG 0.639715 2_4:-20980220 None:intergenic
TAATACCTGAAAGGTCCCAT+GGG 0.646764 2_4:-20981658 None:intergenic
TGATAGGACTCTTATTGAGA+AGG 0.647809 2_4:+20979461 Msa0320470:CDS
AGCAAGTCAACTACTACTTG+CGG 0.649743 2_4:-20981472 None:intergenic
TTTGCCAGGCCAACAAGACG+AGG 0.650048 2_4:-20978457 None:intergenic
TAGCAACCCATGGTCGTCGA+CGG 0.652337 2_4:-20978728 None:intergenic
TTGTAAAGACTAGCAACCCA+TGG 0.662735 2_4:-20978738 None:intergenic
CAACCTTCAAGAGTCCTGCA+CGG 0.669633 2_4:-20978899 None:intergenic
AAAGAGAGAGAATTGACAGG+AGG 0.669868 2_4:-20974863 None:intergenic
GACCTCAAAGGCAATCAAAG+CGG 0.675043 2_4:+20978614 Msa0320470:intron
GAAGATAAGGAAAACTCCAG+TGG 0.684571 2_4:+20981507 Msa0320470:CDS
CAACTTGGAGTAATTCCTGG+AGG 0.687196 2_4:+20977922 Msa0320470:CDS
CTTGCAAGTATACAATGAGG+AGG 0.689990 2_4:-20980760 None:intergenic
ACCTTCAAGAGTCCTGCACG+GGG 0.690656 2_4:-20978897 None:intergenic
TGACAAAATAGAATCCCTTG+GGG 0.709015 2_4:+20978764 Msa0320470:CDS
ATTGACAGGAGGATTGACGA+TGG 0.710433 2_4:-20974852 None:intergenic
TGGCTGCAAGAGCTGCCAAG+GGG 0.712958 2_4:+20982935 Msa0320470:CDS
TTACTTGCAAGTATACAATG+AGG 0.724079 2_4:-20980763 None:intergenic
GCAAACCTAGCTGAGCACTG+GGG 0.742891 2_4:-20977891 None:intergenic
TGACTGCGCTTGATCCACCG+AGG 0.803973 2_4:-20983408 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTATATTTTGGATTTAAT+TGG + chr2_4:20981207-20981226 Msa0320470:intron 10.0%
!! AGATAATAAATACTTATTAT+TGG + chr2_4:20982398-20982417 Msa0320470:intron 10.0%
!!! TTATAATTTTAAATAGAAAG+GGG - chr2_4:20983180-20983199 None:intergenic 10.0%
!!! GATTATAATTTTAAATAGAA+AGG - chr2_4:20983182-20983201 None:intergenic 10.0%
!!! TTTGAATCTTTTTTATTTTT+TGG - chr2_4:20983462-20983481 None:intergenic 10.0%
!! TATGTTTAGTATTTATTTGT+TGG + chr2_4:20974985-20975004 Msa0320470:intron 15.0%
!! ATAAGAGAAAAACAATTATT+TGG + chr2_4:20976877-20976896 Msa0320470:intron 15.0%
!! GAAAAGAATAATAAGTAATA+TGG - chr2_4:20978025-20978044 None:intergenic 15.0%
!!! AAAGTCTTATTATATTAGTT+AGG + chr2_4:20978266-20978285 Msa0320470:intron 15.0%
!! ATAATCAACAACATTAAAAT+GGG + chr2_4:20978295-20978314 Msa0320470:intron 15.0%
!! CTTAAATAATTGAATAAAAC+TGG + chr2_4:20978355-20978374 Msa0320470:intron 15.0%
!!! ATTTATAGTATTGATGTTTT+CGG + chr2_4:20979899-20979918 Msa0320470:intron 15.0%
!! TCAACAAACAAATTAATATT+AGG - chr2_4:20980614-20980633 None:intergenic 15.0%
!!! CTTCATTAACTATTATATTT+TGG + chr2_4:20980882-20980901 Msa0320470:intron 15.0%
!!! CTTCATTAACTATTATATTT+TGG + chr2_4:20980882-20980901 Msa0320470:intron 15.0%
!!! CTTCATTAACTATTATATTT+TGG + chr2_4:20980882-20980901 Msa0320470:intron 15.0%
!!! GTATATTTTACTTTCAAAAT+AGG - chr2_4:20981316-20981335 None:intergenic 15.0%
!! ATTTATGACTTAAAATTCTA+TGG + chr2_4:20981385-20981404 Msa0320470:intron 15.0%
!! AAATACTTATTATTGGAAAA+AGG + chr2_4:20982405-20982424 Msa0320470:intron 15.0%
!! AATCAAGAAATTATTAACTT+TGG - chr2_4:20982442-20982461 None:intergenic 15.0%
!!! TAATAATTTCTTGATTTTCT+TGG + chr2_4:20982446-20982465 Msa0320470:intron 15.0%
!!! TTTAGGGTAAAAAATAATAA+TGG - chr2_4:20982764-20982783 None:intergenic 15.0%
!! AAAAAAGATAACTGAATCAA+TGG + chr2_4:20974778-20974797 Msa0320470:exon 20.0%
!! CATAAGATAAAATCAGATAA+AGG - chr2_4:20974924-20974943 None:intergenic 20.0%
!!! AGAATTGATTTTGAATGAAT+TGG + chr2_4:20975042-20975061 Msa0320470:intron 20.0%
!!! TGAATTGGTTTTTGTAATTT+TGG + chr2_4:20975057-20975076 Msa0320470:intron 20.0%
!! GTTTAAACTTGAATGTAAAT+TGG + chr2_4:20975079-20975098 Msa0320470:intron 20.0%
!! ACCAATGAAATATAATTTCA+GGG - chr2_4:20975697-20975716 None:intergenic 20.0%
!! AACCAATGAAATATAATTTC+AGG - chr2_4:20975698-20975717 None:intergenic 20.0%
!! AATAAACTGTTTATTATGCA+TGG + chr2_4:20976226-20976245 Msa0320470:intron 20.0%
!!! TTTTGTTTAGTTAAACAATG+TGG + chr2_4:20976284-20976303 Msa0320470:intron 20.0%
!! TTTGTTTAGTTAAACAATGT+GGG + chr2_4:20976285-20976304 Msa0320470:intron 20.0%
!!! AATGTTTTTAGAAACTAAAC+TGG - chr2_4:20976594-20976613 None:intergenic 20.0%
!! GTTAAAATAAACATTAGAGA+AGG - chr2_4:20976791-20976810 None:intergenic 20.0%
!!! TATTTTAACTCATAAGTCAA+CGG + chr2_4:20976802-20976821 Msa0320470:intron 20.0%
!!! TCAAACTAGAGTAATTTTTA+CGG + chr2_4:20977263-20977282 Msa0320470:intron 20.0%
!! AAATTTCTTATTCTAAACTC+TGG - chr2_4:20977794-20977813 None:intergenic 20.0%
!!! AAGGATAATATTTTGTAGAA+AGG - chr2_4:20977834-20977853 None:intergenic 20.0%
!! AAACTAGAAAAATATGTTGA+TGG - chr2_4:20978056-20978075 None:intergenic 20.0%
!!! TTAATGTTGTTGATTATGAA+AGG - chr2_4:20978292-20978311 None:intergenic 20.0%
!! CATAATCAACAACATTAAAA+TGG + chr2_4:20978294-20978313 Msa0320470:intron 20.0%
!!! TTACATATTTTCTACGAAAA+AGG - chr2_4:20978522-20978541 None:intergenic 20.0%
!! TAGTTGTTAATTAGTTGTTA+AGG + chr2_4:20979163-20979182 Msa0320470:intron 20.0%
!! AAATTAAAGATATGCATTAC+AGG - chr2_4:20980014-20980033 None:intergenic 20.0%
!!! ATTTGATTAGTAGAATTTTC+TGG + chr2_4:20980030-20980049 Msa0320470:intron 20.0%
!!! AAATTTTTTTTTCACTGACA+AGG - chr2_4:20980922-20980941 None:intergenic 20.0%
!! AGTCATTCAATTATAATCAT+TGG + chr2_4:20980947-20980966 Msa0320470:intron 20.0%
!! ACTAAATTCAAACATATGTA+GGG - chr2_4:20981289-20981308 None:intergenic 20.0%
!! TACTAAATTCAAACATATGT+AGG - chr2_4:20981290-20981309 None:intergenic 20.0%
!! AGATGTTTATCAAATTGATA+AGG + chr2_4:20981615-20981634 Msa0320470:CDS 20.0%
!!! TTAACTGGTAGTTTTTTTTA+AGG + chr2_4:20982196-20982215 Msa0320470:intron 20.0%
!!! TGATCTGATTTTGTTAAATT+TGG + chr2_4:20982566-20982585 Msa0320470:intron 20.0%
!! TTTAAGGGTTAACTTAATTA+GGG + chr2_4:20982807-20982826 Msa0320470:intron 20.0%
!! AAAGTAAAGATGCAATTAAA+GGG - chr2_4:20983374-20983393 None:intergenic 20.0%
!!! TAAATGATTTCTTGTTATAG+AGG + chr2_4:20983639-20983658 Msa0320470:three_prime_UTR 20.0%
!! TATTGGTTAGAGTCAAAAAT+TGG - chr2_4:20974665-20974684 None:intergenic 25.0%
! ATATTCATTCATATTGAAGG+AGG + chr2_4:20974755-20974774 Msa0320470:five_prime_UTR 25.0%
! TAGCTATTAACAAAATTAGG+TGG - chr2_4:20975262-20975281 None:intergenic 25.0%
! GTGTAGCTATTAACAAAATT+AGG - chr2_4:20975265-20975284 None:intergenic 25.0%
! CAAGTTAGAATTAATTCTAG+AGG - chr2_4:20975458-20975477 None:intergenic 25.0%
! TCCCTGAAATTATATTTCAT+TGG + chr2_4:20975693-20975712 Msa0320470:intron 25.0%
! CTTACATGACATCAAATTAA+AGG - chr2_4:20975947-20975966 None:intergenic 25.0%
!!! CTCTTAAATCCTTTTTTTGA+GGG - chr2_4:20976005-20976024 None:intergenic 25.0%
!!! TCTCTTAAATCCTTTTTTTG+AGG - chr2_4:20976006-20976025 None:intergenic 25.0%
!!! ATCAATTATGCCTTGTTTAA+GGG + chr2_4:20976478-20976497 Msa0320470:intron 25.0%
! AAGAAAAGAAAATGTCATTG+AGG + chr2_4:20976538-20976557 Msa0320470:intron 25.0%
!! ATTTTTACTTTGTATGTGAG+TGG + chr2_4:20976618-20976637 Msa0320470:intron 25.0%
!! ATATTGGACTATTTTCCATA+TGG - chr2_4:20976937-20976956 None:intergenic 25.0%
! AAAACTTTCTATACACTAAG+TGG - chr2_4:20977086-20977105 None:intergenic 25.0%
!!! AAGTTTTATCGACAGTAATT+TGG + chr2_4:20977099-20977118 Msa0320470:intron 25.0%
!!! AGTTTTATCGACAGTAATTT+GGG + chr2_4:20977100-20977119 Msa0320470:intron 25.0%
! TTGGGAAAAATCTTAAAACT+TGG + chr2_4:20977118-20977137 Msa0320470:intron 25.0%
!! GTAGGTTTAAAACAAAAACT+GGG - chr2_4:20977230-20977249 None:intergenic 25.0%
!! TGTAGGTTTAAAACAAAAAC+TGG - chr2_4:20977231-20977250 None:intergenic 25.0%
! CTAAAGATAAGAAGAAAAAG+AGG + chr2_4:20977332-20977351 Msa0320470:intron 25.0%
! TAACAAAATATTCAGGTATG+AGG - chr2_4:20977391-20977410 None:intergenic 25.0%
! GTTACAGTAACAAAATATTC+AGG - chr2_4:20977398-20977417 None:intergenic 25.0%
!! GAATATTTTGTTACTGTAAC+AGG + chr2_4:20977398-20977417 Msa0320470:intron 25.0%
!!! GGTTTTGATATTAATGCATT+TGG + chr2_4:20977443-20977462 Msa0320470:CDS 25.0%
! TACCTTCTATAGTATTAGTT+TGG - chr2_4:20977611-20977630 None:intergenic 25.0%
! TAAACATGACAAAATTAGAG+AGG - chr2_4:20977986-20978005 None:intergenic 25.0%
! TACTCTCAATACATTCAATT+TGG - chr2_4:20978089-20978108 None:intergenic 25.0%
! GACATAATGATGCATAATTT+AGG - chr2_4:20978153-20978172 None:intergenic 25.0%
! AATTGAATAAAACTGGTATG+AGG + chr2_4:20978362-20978381 Msa0320470:intron 25.0%
! TTCCTAAGACAATTTACAAA+TGG - chr2_4:20978426-20978445 None:intergenic 25.0%
! TAACATCAATACAAACCAAA+GGG - chr2_4:20978854-20978873 None:intergenic 25.0%
! ATAACATCAATACAAACCAA+AGG - chr2_4:20978855-20978874 None:intergenic 25.0%
!! TGTATTGATGTTATTGAACA+TGG + chr2_4:20978861-20978880 Msa0320470:CDS 25.0%
! ATACATTATCATCCAGATTT+GGG - chr2_4:20978969-20978988 None:intergenic 25.0%
! TTGTTAATTAGTTGTTAAGG+AGG + chr2_4:20979166-20979185 Msa0320470:intron 25.0%
! TGTTAATTAGTTGTTAAGGA+GGG + chr2_4:20979167-20979186 Msa0320470:intron 25.0%
!!! ATAAAAGCACATTTTAAACC+TGG + chr2_4:20979212-20979231 Msa0320470:intron 25.0%
!! TGATTTTTATAGAACTTCTG+AGG + chr2_4:20979267-20979286 Msa0320470:intron 25.0%
! TAGAAGGAAATCTAAAGATT+TGG - chr2_4:20979308-20979327 None:intergenic 25.0%
! ATTTCCTTCTAATTTAGTTG+TGG + chr2_4:20979317-20979336 Msa0320470:intron 25.0%
!! CAGATAGATATTGTTGATTA+AGG + chr2_4:20979353-20979372 Msa0320470:intron 25.0%
! GAAATAGAGAAGTGAAAAAT+TGG + chr2_4:20979550-20979569 Msa0320470:intron 25.0%
!!! AAGAATCATACAGTTTGTTT+TGG + chr2_4:20979678-20979697 Msa0320470:intron 25.0%
!!! AGAATCATACAGTTTGTTTT+GGG + chr2_4:20979679-20979698 Msa0320470:intron 25.0%
! CATTTACTGTTTATGTAATC+CGG + chr2_4:20979827-20979846 Msa0320470:intron 25.0%
! ATTTACTGTTTATGTAATCC+GGG + chr2_4:20979828-20979847 Msa0320470:intron 25.0%
! ATTACAGGCATAATTTAAAG+TGG - chr2_4:20979999-20980018 None:intergenic 25.0%
! ATATTAATATGCTACCTTTG+AGG - chr2_4:20980090-20980109 None:intergenic 25.0%
! TTTACTTCTTTCAAGATAAC+AGG - chr2_4:20980334-20980353 None:intergenic 25.0%
! AGAAGTAAATGAAAAATTCC+TGG + chr2_4:20980345-20980364 Msa0320470:CDS 25.0%
! CAATAGCGTATAATTTACAA+AGG - chr2_4:20980665-20980684 None:intergenic 25.0%
! CTTTGTAAATTATACGCTAT+TGG + chr2_4:20980663-20980682 Msa0320470:intron 25.0%
! ATTTAGTATTCTTTCCAATC+AGG - chr2_4:20980810-20980829 None:intergenic 25.0%
! CTAATAATACCTGAAGAAAT+GGG - chr2_4:20980854-20980873 None:intergenic 25.0%
! ACTAATAATACCTGAAGAAA+TGG - chr2_4:20980855-20980874 None:intergenic 25.0%
! ATTGAATTATAATCCGTTAG+TGG - chr2_4:20981060-20981079 None:intergenic 25.0%
!!! AACGGATTATAATTCAATGA+CGG + chr2_4:20981062-20981081 Msa0320470:intron 25.0%
! TAATAATACCTGAAGAAATG+GGG - chr2_4:20980853-20980872 None:intergenic 25.0%
! CTAATAATACCTGAAGAAAT+GGG - chr2_4:20980854-20980873 None:intergenic 25.0%
! ACTAATAATACCTGAAGAAA+TGG - chr2_4:20980855-20980874 None:intergenic 25.0%
! TGTCATTCAATTATAATCGT+TGG + chr2_4:20981261-20981280 Msa0320470:intron 25.0%
! TGTAAAAAGTTGTACACTAA+CGG + chr2_4:20981359-20981378 Msa0320470:intron 25.0%
! TATCATACATCTTCTAATGA+AGG + chr2_4:20981732-20981751 Msa0320470:intron 25.0%
! GAAATTCTCAATAAATTGCA+TGG - chr2_4:20981798-20981817 None:intergenic 25.0%
!! ATTAACATGTGCTTTTAAAC+AGG + chr2_4:20982008-20982027 Msa0320470:intron 25.0%
! TCAATATAATTCTTCAACTC+TGG - chr2_4:20982092-20982111 None:intergenic 25.0%
! AGAATTATATTGAGAAGTCT+AGG + chr2_4:20982099-20982118 Msa0320470:CDS 25.0%
! ATTTCATCTATTTATCTCTC+TGG - chr2_4:20982377-20982396 None:intergenic 25.0%
! ATGTGTAAATAACCTTGAAA+CGG + chr2_4:20982470-20982489 Msa0320470:intron 25.0%
! TTTAACAAAATCAGATCAAG+TGG - chr2_4:20982564-20982583 None:intergenic 25.0%
!! CTTTAAGGGTTAACTTAATT+AGG + chr2_4:20982806-20982825 Msa0320470:intron 25.0%
! TTAAGGGTTAACTTAATTAG+GGG + chr2_4:20982808-20982827 Msa0320470:intron 25.0%
! ATAATCCCTTGTATATATGA+CGG + chr2_4:20983149-20983168 Msa0320470:intron 25.0%
! ATCATAGTTATTCAAACACA+AGG - chr2_4:20983218-20983237 None:intergenic 25.0%
!! CAATTAAAGGGTGTAATATA+TGG - chr2_4:20983362-20983381 None:intergenic 25.0%
! GAAAGTAAAGATGCAATTAA+AGG - chr2_4:20983375-20983394 None:intergenic 25.0%
!! TTTCTTGTTATAGAGGTTTA+TGG + chr2_4:20983646-20983665 Msa0320470:three_prime_UTR 25.0%
!!! ATTTTGACAAGCATAATTGT+TGG - chr2_4:20983756-20983775 None:intergenic 25.0%
CGTAAACGATGTTTGTATAT+TGG - chr2_4:20974682-20974701 None:intergenic 30.0%
CGCATATTCATTCATATTGA+AGG + chr2_4:20974752-20974771 Msa0320470:five_prime_UTR 30.0%
TGTCAGACTAATAATCAACT+AGG + chr2_4:20975116-20975135 Msa0320470:intron 30.0%
GTCAGACTAATAATCAACTA+GGG + chr2_4:20975117-20975136 Msa0320470:intron 30.0%
! TTTTGTTAATAGCTACACTC+CGG + chr2_4:20975267-20975286 Msa0320470:intron 30.0%
TGAGTTAGAAAAAATCATCG+CGG - chr2_4:20975322-20975341 None:intergenic 30.0%
CTAGTGTATGTTTGAATGAA+CGG - chr2_4:20975345-20975364 None:intergenic 30.0%
!!! ATGTTTCGTTTCACTTTTTC+AGG + chr2_4:20975369-20975388 Msa0320470:intron 30.0%
! GGATTCAAATTTGATTTCAG+AGG + chr2_4:20975390-20975409 Msa0320470:intron 30.0%
!! CAGAGGTGTAAAATTGATTT+TGG + chr2_4:20975407-20975426 Msa0320470:intron 30.0%
GACATCGGAATTTAAGAAAA+TGG + chr2_4:20975854-20975873 Msa0320470:intron 30.0%
CTTGAGGAATGGAAAATAAA+AGG - chr2_4:20976067-20976086 None:intergenic 30.0%
!! AACAAACGTAATTTAGCTTG+AGG - chr2_4:20976083-20976102 None:intergenic 30.0%
!! TTAAACTCTGAAACACTAGA+GGG - chr2_4:20976130-20976149 None:intergenic 30.0%
!! TTTAAACTCTGAAACACTAG+AGG - chr2_4:20976131-20976150 None:intergenic 30.0%
TCTAGTGTTTCAGAGTTTAA+AGG + chr2_4:20976130-20976149 Msa0320470:intron 30.0%
TTAGTTAAACAATGTGGGTT+TGG + chr2_4:20976290-20976309 Msa0320470:intron 30.0%
!!! TATAAGGTGTTGTTTTGAAG+TGG + chr2_4:20976342-20976361 Msa0320470:intron 30.0%
!!! ATAAGGTGTTGTTTTGAAGT+GGG + chr2_4:20976343-20976362 Msa0320470:intron 30.0%
AATGGAAATGAATCATCGTT+TGG + chr2_4:20976367-20976386 Msa0320470:intron 30.0%
!! GATCAATTATGCCTTGTTTA+AGG + chr2_4:20976477-20976496 Msa0320470:intron 30.0%
!! TCAATTATGCCTTGTTTAAG+GGG + chr2_4:20976479-20976498 Msa0320470:intron 30.0%
TTAGACAACAGTCACAATTA+GGG + chr2_4:20976568-20976587 Msa0320470:intron 30.0%
ATCCAGTCATAACTCAAATA+TGG - chr2_4:20977031-20977050 None:intergenic 30.0%
TCAAAACTACAATGAGCTTT+GGG - chr2_4:20977163-20977182 None:intergenic 30.0%
ATCAAAACTACAATGAGCTT+TGG - chr2_4:20977164-20977183 None:intergenic 30.0%
TTTGAACAATCTATGCTTGT+AGG - chr2_4:20977248-20977267 None:intergenic 30.0%
AGAGGAAACGTATAATCAAA+CGG + chr2_4:20977350-20977369 Msa0320470:intron 30.0%
! TACCTAATCCCTTTTGTATT+AGG - chr2_4:20977469-20977488 None:intergenic 30.0%
! ACTCATTTTCTAATTCTTCC+TGG + chr2_4:20977541-20977560 Msa0320470:intron 30.0%
AGTTCTATTGATATCAAACC+AGG - chr2_4:20977588-20977607 None:intergenic 30.0%
CTCCAAACTAATACTATAGA+AGG + chr2_4:20977606-20977625 Msa0320470:CDS 30.0%
! CTTCTCATTTCATCTTTTAG+CGG + chr2_4:20977692-20977711 Msa0320470:intron 30.0%
! TTCTCATTTCATCTTTTAGC+GGG + chr2_4:20977693-20977712 Msa0320470:intron 30.0%
TTATCCTTTCTTCCTATAAC+AGG + chr2_4:20977846-20977865 Msa0320470:intron 30.0%
GAATTAGTGCAACTAACAAT+CGG - chr2_4:20977964-20977983 None:intergenic 30.0%
! CAACAACATTAAAATGGGTT+AGG + chr2_4:20978300-20978319 Msa0320470:intron 30.0%
TTACAAATGGCGAGTTAAAA+TGG - chr2_4:20978413-20978432 None:intergenic 30.0%
AAAAGTTAAATCTCAACCAC+TGG - chr2_4:20978567-20978586 None:intergenic 30.0%
TTTACAATTGAAGACCTCAA+AGG + chr2_4:20978602-20978621 Msa0320470:intron 30.0%
GATACATTATCATCCAGATT+TGG - chr2_4:20978970-20978989 None:intergenic 30.0%
ATAATGTATCTAACCTTTGC+AGG + chr2_4:20978980-20978999 Msa0320470:intron 30.0%
AATTAACAACTAGTACCTTG+AGG - chr2_4:20979155-20979174 None:intergenic 30.0%
GTTAATTAGTTGTTAAGGAG+GGG + chr2_4:20979168-20979187 Msa0320470:intron 30.0%
CAAGATATATCATGTGTGAT+AGG + chr2_4:20979445-20979464 Msa0320470:CDS 30.0%
AGTTAGCACATAAGTTGTTA+AGG + chr2_4:20979499-20979518 Msa0320470:intron 30.0%
ACAAAAACTCTCCATACTAT+GGG - chr2_4:20979525-20979544 None:intergenic 30.0%
AACAAAAACTCTCCATACTA+TGG - chr2_4:20979526-20979545 None:intergenic 30.0%
CGGATTACATAAACAGTAAA+TGG - chr2_4:20979829-20979848 None:intergenic 30.0%
! AGGCATAATTTAAAGTGGTT+AGG - chr2_4:20979994-20980013 None:intergenic 30.0%
!! CTTCTGAAAAGAAAGTACTA+AGG - chr2_4:20980154-20980173 None:intergenic 30.0%
! AATTAAAGCAGTTGCTATTC+CGG - chr2_4:20980299-20980318 None:intergenic 30.0%
ATAGCAACTGCTTTAATTCT+TGG + chr2_4:20980301-20980320 Msa0320470:CDS 30.0%
GAGAAAAGATCCTTGTAAAT+TGG + chr2_4:20980394-20980413 Msa0320470:intron 30.0%
! TTTGAAGCTTTCATAGTCAA+TGG - chr2_4:20980554-20980573 None:intergenic 30.0%
TTACTTGCAAGTATACAATG+AGG - chr2_4:20980766-20980785 None:intergenic 30.0%
AGAATACTAAATCTGAAGAC+CGG + chr2_4:20980818-20980837 Msa0320470:CDS 30.0%
TGTAAAAAGTTGTCCACTAA+CGG + chr2_4:20981044-20981063 Msa0320470:intron 30.0%
CACAAATAATTGGTATGCAA+TGG - chr2_4:20981108-20981127 None:intergenic 30.0%
GAAGAGTGAACACAAATAAT+TGG - chr2_4:20981118-20981137 None:intergenic 30.0%
TAGATATTGGAAGGAAGATA+AGG + chr2_4:20981494-20981513 Msa0320470:CDS 30.0%
ACCATGTTCAATAAGAAACA+TGG - chr2_4:20981593-20981612 None:intergenic 30.0%
! ACCTTTCAGGTATTAATACT+TGG + chr2_4:20981666-20981685 Msa0320470:intron 30.0%
TCCAAGTATTAATACCTGAA+AGG - chr2_4:20981670-20981689 None:intergenic 30.0%
AACTCTTAGAGAAGTGAATA+TGG - chr2_4:20981707-20981726 None:intergenic 30.0%
TACTTAACAATAACAAGCTC+AGG + chr2_4:20981945-20981964 Msa0320470:intron 30.0%
ATTTGTACGATGATAAACGT+AGG + chr2_4:20982054-20982073 Msa0320470:CDS 30.0%
TTTGTACGATGATAAACGTA+GGG + chr2_4:20982055-20982074 Msa0320470:CDS 30.0%
! GAGTATAAATTAGTTTGACC+GGG - chr2_4:20982163-20982182 None:intergenic 30.0%
! GGAGTATAAATTAGTTTGAC+CGG - chr2_4:20982164-20982183 None:intergenic 30.0%
ACACAACAGTCAAGTAAAAA+CGG - chr2_4:20982520-20982539 None:intergenic 30.0%
! TTTTTACTTGACTGTTGTGT+GGG + chr2_4:20982520-20982539 Msa0320470:intron 30.0%
! TTTTGTTAAATTTGGCGAAC+TGG + chr2_4:20982574-20982593 Msa0320470:intron 30.0%
GCTTGTAAAACTATCAGAAA+AGG + chr2_4:20982600-20982619 Msa0320470:intron 30.0%
TCTTGATATTTCAGCTGTTA+TGG + chr2_4:20982705-20982724 Msa0320470:CDS 30.0%
CTTGATATTTCAGCTGTTAT+GGG + chr2_4:20982706-20982725 Msa0320470:CDS 30.0%
!! CAAGAAGCACAAACTTTTTA+GGG - chr2_4:20982780-20982799 None:intergenic 30.0%
!! ACAAGAAGCACAAACTTTTT+AGG - chr2_4:20982781-20982800 None:intergenic 30.0%
CAATCTTGAGTATATGTACT+TGG - chr2_4:20982866-20982885 None:intergenic 30.0%
CAAGTACATATACTCAAGAT+TGG + chr2_4:20982864-20982883 Msa0320470:CDS 30.0%
GATCTTAGATTTCTTACCAA+TGG - chr2_4:20982964-20982983 None:intergenic 30.0%
ATACAAGGGATTATATCTGT+AGG - chr2_4:20983143-20983162 None:intergenic 30.0%
! GGAAGTTATTGCATGATTTT+TGG + chr2_4:20983291-20983310 Msa0320470:intron 30.0%
GTACAAATGAAAGCTTCTTA+GGG - chr2_4:20983318-20983337 None:intergenic 30.0%
AGTACAAATGAAAGCTTCTT+AGG - chr2_4:20983319-20983338 None:intergenic 30.0%
ATCTTTACTTTCATGTTGCA+GGG + chr2_4:20983383-20983402 Msa0320470:intron 30.0%
! TATGTTCCTATCCTTTGAAA+GGG - chr2_4:20983521-20983540 None:intergenic 30.0%
TTATGTTCCTATCCTTTGAA+AGG - chr2_4:20983522-20983541 None:intergenic 30.0%
TTAATCTCTTGGAAGAGATT+TGG - chr2_4:20983556-20983575 None:intergenic 30.0%
ACTAACACAGATTAATCTCT+TGG - chr2_4:20983567-20983586 None:intergenic 30.0%
GGTTAGAGTCAAAAATTGGT+TGG - chr2_4:20974661-20974680 None:intergenic 35.0%
TTACGTCACTCTTGAAAAAC+AGG + chr2_4:20974697-20974716 Msa0320470:five_prime_UTR 35.0%
ATAACTGAATCAATGGCGAA+AGG + chr2_4:20974785-20974804 Msa0320470:exon 35.0%
TCAAAAGAGAGAGAATTGAC+AGG - chr2_4:20974869-20974888 None:intergenic 35.0%
! GTCAATTCTCTCTCTTTTGA+TGG + chr2_4:20974869-20974888 Msa0320470:CDS 35.0%
GGAATGATCTGATTCATGTT+TGG + chr2_4:20975006-20975025 Msa0320470:intron 35.0%
GAAGCTAGAGTCAATTATGA+TGG + chr2_4:20975165-20975184 Msa0320470:intron 35.0%
GAGAAGACTAATTGCATGAT+TGG + chr2_4:20975204-20975223 Msa0320470:intron 35.0%
TAATTGCATGATTGGATTCG+CGG + chr2_4:20975212-20975231 Msa0320470:intron 35.0%
AGAGACTATCCCTCAAAAAA+AGG + chr2_4:20975993-20976012 Msa0320470:intron 35.0%
!! ACGTAATTTAGCTTGAGGAA+TGG - chr2_4:20976078-20976097 None:intergenic 35.0%
!! TTTAAAGGAGAGTTTTGACG+AGG + chr2_4:20976145-20976164 Msa0320470:CDS 35.0%
AAATGTAGAGAGCAGCTATA+AGG + chr2_4:20976326-20976345 Msa0320470:intron 35.0%
!!! TGTTGTTTTGAAGTGGGAAA+TGG + chr2_4:20976349-20976368 Msa0320470:intron 35.0%
!! CAATTATGCCTTGTTTAAGG+GGG + chr2_4:20976480-20976499 Msa0320470:intron 35.0%
GTTAGACAACAGTCACAATT+AGG + chr2_4:20976567-20976586 Msa0320470:intron 35.0%
TTACTTTGTATGTGAGTGGT+TGG + chr2_4:20976622-20976641 Msa0320470:intron 35.0%
GAGAGAGACTGGAAAAATAT+AGG + chr2_4:20976966-20976985 Msa0320470:intron 35.0%
! CACCATATTTGAGTTATGAC+TGG + chr2_4:20977026-20977045 Msa0320470:intron 35.0%
TGAGTTATGACTGGATATTG+TGG + chr2_4:20977035-20977054 Msa0320470:intron 35.0%
TTCTATACACTAAGTGGAGT+CGG - chr2_4:20977080-20977099 None:intergenic 35.0%
CAAAACTACAATGAGCTTTG+GGG - chr2_4:20977162-20977181 None:intergenic 35.0%
TGCATTTGGCCTAATACAAA+AGG + chr2_4:20977457-20977476 Msa0320470:CDS 35.0%
GCATTTGGCCTAATACAAAA+GGG + chr2_4:20977458-20977477 Msa0320470:CDS 35.0%
! ATTACTCCAAGTTGAAGTTC+AGG - chr2_4:20977916-20977935 None:intergenic 35.0%
TGTTGTTATAGACCTGTATG+TGG + chr2_4:20978202-20978221 Msa0320470:intron 35.0%
CGCCATTTGTAAATTGTCTT+AGG + chr2_4:20978421-20978440 Msa0320470:intron 35.0%
TTAAATCTCAACCACTGGAT+AGG - chr2_4:20978562-20978581 None:intergenic 35.0%
TTTAGTGTCACCTGATAAGT+TGG + chr2_4:20978668-20978687 Msa0320470:CDS 35.0%
ACTGACAAAATAGAATCCCT+TGG + chr2_4:20978762-20978781 Msa0320470:CDS 35.0%
CTGACAAAATAGAATCCCTT+GGG + chr2_4:20978763-20978782 Msa0320470:CDS 35.0%
TGACAAAATAGAATCCCTTG+GGG + chr2_4:20978764-20978783 Msa0320470:CDS 35.0%
ATTGAACATGGAATAGTTGC+TGG + chr2_4:20978873-20978892 Msa0320470:CDS 35.0%
! AAATTGCTGTTACCCAAATC+TGG + chr2_4:20978954-20978973 Msa0320470:intron 35.0%
! CACATATTTTTCTCTCAACG+AGG + chr2_4:20979056-20979075 Msa0320470:CDS 35.0%
AGTTTGAATTCTGTGTAACC+AGG - chr2_4:20979233-20979252 None:intergenic 35.0%
TGATAGGACTCTTATTGAGA+AGG + chr2_4:20979461-20979480 Msa0320470:CDS 35.0%
AGTGTGAATTGAATTGTGCA+AGG + chr2_4:20979609-20979628 Msa0320470:intron 35.0%
GTGTGAATTGAATTGTGCAA+GGG + chr2_4:20979610-20979629 Msa0320470:intron 35.0%
GCAAGGGAAATTCTGTTATA+AGG + chr2_4:20979626-20979645 Msa0320470:intron 35.0%
AGGGAAATTCTGTTATAAGG+AGG + chr2_4:20979629-20979648 Msa0320470:intron 35.0%
TTCTGTTATAAGGAGGTTGA+AGG + chr2_4:20979636-20979655 Msa0320470:CDS 35.0%
! AGAGAGAATTTGTTCTCTGA+AGG + chr2_4:20979703-20979722 Msa0320470:intron 35.0%
GGAAGAAAACAAAGCAACAA+CGG - chr2_4:20979808-20979827 None:intergenic 35.0%
!!! TAGAATTTTCTGGCTTGTGT+TGG + chr2_4:20980040-20980059 Msa0320470:intron 35.0%
!!! AGAATTTTCTGGCTTGTGTT+GGG + chr2_4:20980041-20980060 Msa0320470:intron 35.0%
TGTCAGTAAAGTAACCTCAA+AGG + chr2_4:20980073-20980092 Msa0320470:intron 35.0%
AATGAAAAATTCCTGGAAGC+AGG + chr2_4:20980352-20980371 Msa0320470:CDS 35.0%
GCATCAAGAACCAATTTACA+AGG - chr2_4:20980407-20980426 None:intergenic 35.0%
AAAACCATCTCTCTTCTCAA+AGG + chr2_4:20980526-20980545 Msa0320470:CDS 35.0%
CTATGAAAGCTTCAAAGATG+TGG + chr2_4:20980558-20980577 Msa0320470:CDS 35.0%
!! AGCAAAGATCTGTTGCTTTA+AGG - chr2_4:20980722-20980741 None:intergenic 35.0%
TGTCAATCAATTACAGTCAG+TGG - chr2_4:20981338-20981357 None:intergenic 35.0%
!! GTAGTTGACTTGCTAGATAT+TGG + chr2_4:20981481-20981500 Msa0320470:CDS 35.0%
!! TTGACTTGCTAGATATTGGA+AGG + chr2_4:20981485-20981504 Msa0320470:CDS 35.0%
!! GTACTGGATTTGCTGTTAAT+AGG + chr2_4:20981542-20981561 Msa0320470:CDS 35.0%
GCCATGTTTCTTATTGAACA+TGG + chr2_4:20981589-20981608 Msa0320470:CDS 35.0%
GATAAGGCAGTAACTAAGTT+TGG + chr2_4:20981631-20981650 Msa0320470:CDS 35.0%
!! TTGATTTGTAAGTTCGCTCA+GGG - chr2_4:20981820-20981839 None:intergenic 35.0%
!! ATTGATTTGTAAGTTCGCTC+AGG - chr2_4:20981821-20981840 None:intergenic 35.0%
! CTTTTATCCTCTTGCATAAG+TGG - chr2_4:20981851-20981870 None:intergenic 35.0%
AAAAGTCGTTGAGTTATGTG+TGG + chr2_4:20981981-20982000 Msa0320470:intron 35.0%
TAATTCTTCAACTCTGGATC+AGG - chr2_4:20982086-20982105 None:intergenic 35.0%
AACTACCAGTTAACTAGTAG+AGG - chr2_4:20982189-20982208 None:intergenic 35.0%
!! TCTCTGGAATAAACAGTTAC+GGG - chr2_4:20982361-20982380 None:intergenic 35.0%
!! CTCTCTGGAATAAACAGTTA+CGG - chr2_4:20982362-20982381 None:intergenic 35.0%
! GTTTTTACTTGACTGTTGTG+TGG + chr2_4:20982519-20982538 Msa0320470:intron 35.0%
TATTTCAGCTGTTATGGGAA+TGG + chr2_4:20982711-20982730 Msa0320470:CDS 35.0%
ATTTCAGCTGTTATGGGAAT+GGG + chr2_4:20982712-20982731 Msa0320470:CDS 35.0%
TGCTTCTTGTTCTGACTTTA+AGG + chr2_4:20982791-20982810 Msa0320470:intron 35.0%
GCTTCTTGTTCTGACTTTAA+GGG + chr2_4:20982792-20982811 Msa0320470:intron 35.0%
! TATACTCAAGATTGGCTGAA+TGG + chr2_4:20982872-20982891 Msa0320470:CDS 35.0%
GCTGAATGGTCAAAACTATA+TGG + chr2_4:20982886-20982905 Msa0320470:CDS 35.0%
CAGATCCGTCATATATACAA+GGG - chr2_4:20983157-20983176 None:intergenic 35.0%
TGATATCCGAAAAAATGACG+AGG + chr2_4:20983234-20983253 Msa0320470:intron 35.0%
!!! CTCAAACCTCGTCATTTTTT+CGG - chr2_4:20983243-20983262 None:intergenic 35.0%
GAAAAAATGACGAGGTTTGA+GGG + chr2_4:20983242-20983261 Msa0320470:intron 35.0%
AAAAAATGACGAGGTTTGAG+GGG + chr2_4:20983243-20983262 Msa0320470:intron 35.0%
CATCTTTACTTTCATGTTGC+AGG + chr2_4:20983382-20983401 Msa0320470:intron 35.0%
! GATTTTCTTTCCCCTTTCAA+AGG + chr2_4:20983507-20983526 Msa0320470:three_prime_UTR 35.0%
! ATGTTCCTATCCTTTGAAAG+GGG - chr2_4:20983520-20983539 None:intergenic 35.0%
AAAGAGAGAGAATTGACAGG+AGG - chr2_4:20974866-20974885 None:intergenic 40.0%
CGGTGAAATTGACAAAGTCA+GGG + chr2_4:20975232-20975251 Msa0320470:intron 40.0%
CTGTGATTTCGTTGAATCTC+CGG - chr2_4:20975289-20975308 None:intergenic 40.0%
AAAAAATCATCGCGGCACAA+TGG - chr2_4:20975314-20975333 None:intergenic 40.0%
TAATTGCCTCACGTTTGAGA+CGG - chr2_4:20975756-20975775 None:intergenic 40.0%
CTTCATAGCTTACATGTGTG+TGG - chr2_4:20975812-20975831 None:intergenic 40.0%
TGACACTGACATGTAGACAT+CGG + chr2_4:20975839-20975858 Msa0320470:intron 40.0%
TCACAAGAGAGAAGATGTCA+AGG + chr2_4:20976169-20976188 Msa0320470:CDS 40.0%
! GTCAAGGCAATTGTTGTTAC+AGG + chr2_4:20976185-20976204 Msa0320470:CDS 40.0%
TGGTCCTGTAAAATCTCAAC+AGG + chr2_4:20976387-20976406 Msa0320470:intron 40.0%
GGTCCTGTAAAATCTCAACA+GGG + chr2_4:20976388-20976407 Msa0320470:intron 40.0%
GTCCTGTAAAATCTCAACAG+GGG + chr2_4:20976389-20976408 Msa0320470:intron 40.0%
ATCTCAACAGGGGAGAAAAT+AGG + chr2_4:20976399-20976418 Msa0320470:intron 40.0%
! TCAAAAGCTTTGTCTATGCG+AGG + chr2_4:20976436-20976455 Msa0320470:intron 40.0%
TCTATGCGAGGTTGAGTATA+TGG + chr2_4:20976448-20976467 Msa0320470:intron 40.0%
TGAGTGGTTGGAGTAACATT+TGG + chr2_4:20976634-20976653 Msa0320470:intron 40.0%
GAGTGGTTGGAGTAACATTT+GGG + chr2_4:20976635-20976654 Msa0320470:intron 40.0%
ACACGAGGACGAATAGTTAA+GGG - chr2_4:20976829-20976848 None:intergenic 40.0%
AACACGAGGACGAATAGTTA+AGG - chr2_4:20976830-20976849 None:intergenic 40.0%
GTCTATCTTCAACTAACACG+AGG - chr2_4:20976844-20976863 None:intergenic 40.0%
ATATGGTCTATCTTTCCTGC+CGG - chr2_4:20976920-20976939 None:intergenic 40.0%
GAAAATAGTCCAATATGCCG+AGG + chr2_4:20976941-20976960 Msa0320470:intron 40.0%
AATATAGGCCAAAACGTTGC+AGG + chr2_4:20976981-20977000 Msa0320470:intron 40.0%
! CAAAATCTCCTGCAACGTTT+TGG - chr2_4:20976992-20977011 None:intergenic 40.0%
GGCCTAATACAAAAGGGATT+AGG + chr2_4:20977464-20977483 Msa0320470:CDS 40.0%
AATTCTTCCTGGCCATATAC+AGG + chr2_4:20977552-20977571 Msa0320470:intron 40.0%
ATTCTTCCTGGCCATATACA+GGG + chr2_4:20977553-20977572 Msa0320470:intron 40.0%
! CATTTCATCTTTTAGCGGGA+AGG + chr2_4:20977697-20977716 Msa0320470:intron 40.0%
CATGCCTGTTATAGGAAGAA+AGG - chr2_4:20977853-20977872 None:intergenic 40.0%
CTTCAACTTGGAGTAATTCC+TGG + chr2_4:20977919-20977938 Msa0320470:CDS 40.0%
TTCACCATGATCTCTGGTAA+GGG - chr2_4:20978247-20978266 None:intergenic 40.0%
TTTCACCATGATCTCTGGTA+AGG - chr2_4:20978248-20978267 None:intergenic 40.0%
! AGACTTTTCACCATGATCTC+TGG - chr2_4:20978253-20978272 None:intergenic 40.0%
TTGTAAAGACTAGCAACCCA+TGG - chr2_4:20978741-20978760 None:intergenic 40.0%
TCCTAATCTTAAGCACCCTT+TGG + chr2_4:20978836-20978855 Msa0320470:CDS 40.0%
!! ACCAAAGGGTGCTTAAGATT+AGG - chr2_4:20978840-20978859 None:intergenic 40.0%
TTGAATGTGACAGCTTGCAA+TGG - chr2_4:20979405-20979424 None:intergenic 40.0%
AGTTGTTAAGGCCCATAGTA+TGG + chr2_4:20979511-20979530 Msa0320470:intron 40.0%
!! AGCTTAGTTCTGTGGACAAT+AGG + chr2_4:20979726-20979745 Msa0320470:intron 40.0%
!!! GAATTTTCTGGCTTGTGTTG+GGG + chr2_4:20980042-20980061 Msa0320470:intron 40.0%
AAGGAACAGAATAGCTAAGC+AGG - chr2_4:20980135-20980154 None:intergenic 40.0%
GGTTCCTAGACAAGTGAAAA+AGG + chr2_4:20980243-20980262 Msa0320470:CDS 40.0%
!! GCAACCTTTTTCACTTGTCT+AGG - chr2_4:20980250-20980269 None:intergenic 40.0%
GTGAAAAAGGTTGCAATCCT+TGG + chr2_4:20980256-20980275 Msa0320470:CDS 40.0%
AAAAAGGTTGCAATCCTTGG+CGG + chr2_4:20980259-20980278 Msa0320470:CDS 40.0%
GCAGGTGTTAACAGAGTTAA+AGG + chr2_4:20980370-20980389 Msa0320470:CDS 40.0%
TTACAAAGCCGTGTCAAGAA+AGG + chr2_4:20980478-20980497 Msa0320470:CDS 40.0%
TACAAAGCCGTGTCAAGAAA+GGG + chr2_4:20980479-20980498 Msa0320470:CDS 40.0%
TCATTTGCCCTTTCTTGACA+CGG - chr2_4:20980489-20980508 None:intergenic 40.0%
CAAGAAAGGGCAAATGACTA+AGG + chr2_4:20980492-20980511 Msa0320470:CDS 40.0%
CATTCTCAATAACAGCCTGT+CGG - chr2_4:20980696-20980715 None:intergenic 40.0%
! GAGGAGGACAATACTTTTCA+AGG - chr2_4:20980747-20980766 None:intergenic 40.0%
CTTGCAAGTATACAATGAGG+AGG - chr2_4:20980763-20980782 None:intergenic 40.0%
AATCAGGTTCAAGTCGATTG+TGG - chr2_4:20980794-20980813 None:intergenic 40.0%
!! ACAATCGACTTGAACCTGAT+TGG + chr2_4:20980793-20980812 Msa0320470:CDS 40.0%
AAATCTGAAGACCGGATTGT+TGG + chr2_4:20980826-20980845 Msa0320470:CDS 40.0%
! ATTTTGGACCCCATTTCTTC+AGG + chr2_4:20981150-20981169 Msa0320470:intron 40.0%
AGCAAGTCAACTACTACTTG+CGG - chr2_4:20981475-20981494 None:intergenic 40.0%
GAAGATAAGGAAAACTCCAG+TGG + chr2_4:20981507-20981526 Msa0320470:CDS 40.0%
GTACAATTTCCAACTACCAC+TGG - chr2_4:20981526-20981545 None:intergenic 40.0%
GTGGTAGTTGGAAATTGTAC+TGG + chr2_4:20981526-20981545 Msa0320470:CDS 40.0%
ACATGGCTGCTTGTGTATAT+GGG - chr2_4:20981576-20981595 None:intergenic 40.0%
AACATGGCTGCTTGTGTATA+TGG - chr2_4:20981577-20981596 None:intergenic 40.0%
! AACTAAGTTTGGAATGCCCA+TGG + chr2_4:20981642-20981661 Msa0320470:CDS 40.0%
! ACTAAGTTTGGAATGCCCAT+GGG + chr2_4:20981643-20981662 Msa0320470:CDS 40.0%
TAATACCTGAAAGGTCCCAT+GGG - chr2_4:20981661-20981680 None:intergenic 40.0%
TTAATACCTGAAAGGTCCCA+TGG - chr2_4:20981662-20981681 None:intergenic 40.0%
!!! TTGATTGACCTCGTTGGTTT+TGG + chr2_4:20981755-20981774 Msa0320470:CDS 40.0%
TATCCTCTTGCATAAGTGGA+AGG - chr2_4:20981847-20981866 None:intergenic 40.0%
ATGCAAGAGGATAAAAGAGC+AGG + chr2_4:20981854-20981873 Msa0320470:CDS 40.0%
GAGAAGTCTAGGAACATTTC+TGG + chr2_4:20982110-20982129 Msa0320470:CDS 40.0%
!! GGATCCTAAGGTATTTTACC+CGG + chr2_4:20982142-20982161 Msa0320470:intron 40.0%
TTGACCGGGTAAAATACCTT+AGG - chr2_4:20982149-20982168 None:intergenic 40.0%
ACCAGTTAACTAGTAGAGGA+GGG - chr2_4:20982185-20982204 None:intergenic 40.0%
TACCAGTTAACTAGTAGAGG+AGG - chr2_4:20982186-20982205 None:intergenic 40.0%
AGAGATGATCTTCTTTCCTG+TGG + chr2_4:20982630-20982649 Msa0320470:CDS 40.0%
TAACTGCAATGCCTTCATCA+AGG - chr2_4:20982675-20982694 None:intergenic 40.0%
ATGGATGAGACAAACCTGTA+AGG - chr2_4:20982745-20982764 None:intergenic 40.0%
AGGGTTAACTTAATTAGGGG+AGG + chr2_4:20982811-20982830 Msa0320470:intron 40.0%
!! TTAGGGGAGGTATCATATTC+TGG + chr2_4:20982824-20982843 Msa0320470:intron 40.0%
!! TAGGGGAGGTATCATATTCT+GGG + chr2_4:20982825-20982844 Msa0320470:intron 40.0%
AGATCAGATACTTGCCTCTT+AGG + chr2_4:20983006-20983025 Msa0320470:intron 40.0%
GTACTAAAATGCAGCCTAAG+AGG - chr2_4:20983023-20983042 None:intergenic 40.0%
ACCAAACTGACAATGCAGTT+GGG - chr2_4:20983052-20983071 None:intergenic 40.0%
GCAGATCCGTCATATATACA+AGG - chr2_4:20983158-20983177 None:intergenic 40.0%
CGAAAAAATGACGAGGTTTG+AGG + chr2_4:20983241-20983260 Msa0320470:intron 40.0%
TGATGGCAATGACATCAACA+TGG + chr2_4:20983270-20983289 Msa0320470:intron 40.0%
TCTTTCCCCTTTCAAAGGAT+AGG + chr2_4:20983512-20983531 Msa0320470:three_prime_UTR 40.0%
!!! GGACACACTGTTTTGGAAGT+TGG + chr2_4:20974806-20974825 Msa0320470:CDS 45.0%
!!! GTTTTGGAAGTTGGAGCTGA+TGG + chr2_4:20974815-20974834 Msa0320470:CDS 45.0%
! AGGATTGACGATGGTGATGA+TGG - chr2_4:20974846-20974865 None:intergenic 45.0%
ATTGACAGGAGGATTGACGA+TGG - chr2_4:20974855-20974874 None:intergenic 45.0%
GCGGTGAAATTGACAAAGTC+AGG + chr2_4:20975231-20975250 Msa0320470:intron 45.0%
CAAGCATGCACTTGCATGTT+TGG + chr2_4:20975580-20975599 Msa0320470:intron 45.0%
TCAATTCCGTCTCAAACGTG+AGG + chr2_4:20975747-20975766 Msa0320470:intron 45.0%
TGTGTCAGACATCGACACAA+CGG - chr2_4:20975917-20975936 None:intergenic 45.0%
! CTCCCCTGTTGAGATTTTAC+AGG - chr2_4:20976394-20976413 None:intergenic 45.0%
CAACTTCTCCCCCTTAAACA+AGG - chr2_4:20976491-20976510 None:intergenic 45.0%
! TGCCGGTGAATGCTTTAAGT+GGG - chr2_4:20976903-20976922 None:intergenic 45.0%
GGCAGGAAAGATAGACCATA+TGG + chr2_4:20976919-20976938 Msa0320470:intron 45.0%
TTTCCAGTCTCTCTCTACCT+CGG - chr2_4:20976961-20976980 None:intergenic 45.0%
TGTTACTGTAACAGGTGCGA+AGG + chr2_4:20977406-20977425 Msa0320470:intron 45.0%
GTTACTGTAACAGGTGCGAA+GGG + chr2_4:20977407-20977426 Msa0320470:intron 45.0%
! GGTGCGAAGGGAAAATTTTC+TGG + chr2_4:20977419-20977438 Msa0320470:intron 45.0%
! GCGAAGGGAAAATTTTCTGG+CGG + chr2_4:20977422-20977441 Msa0320470:CDS 45.0%
TTCTTCCTGGCCATATACAG+GGG + chr2_4:20977554-20977573 Msa0320470:intron 45.0%
! GGCTTTGTATCCCCTGTATA+TGG - chr2_4:20977567-20977586 None:intergenic 45.0%
TATACAGGGGATACAAAGCC+TGG + chr2_4:20977567-20977586 Msa0320470:intron 45.0%
TATAACAGGCATGCACTGCA+CGG + chr2_4:20977860-20977879 Msa0320470:intron 45.0%
GGTTTGCCTGAACTTCAACT+TGG + chr2_4:20977907-20977926 Msa0320470:CDS 45.0%
CAACTTGGAGTAATTCCTGG+AGG + chr2_4:20977922-20977941 Msa0320470:CDS 45.0%
TAGCACACACAACCACATAC+AGG - chr2_4:20978217-20978236 None:intergenic 45.0%
AAGTCCCTTACCAGAGATCA+TGG + chr2_4:20978240-20978259 Msa0320470:intron 45.0%
!! AAAGGCACTTGAGATGATGC+TGG + chr2_4:20978477-20978496 Msa0320470:CDS 45.0%
GACCTCAAAGGCAATCAAAG+CGG + chr2_4:20978614-20978633 Msa0320470:intron 45.0%
TTCCGCTTTGATTGCCTTTG+AGG - chr2_4:20978619-20978638 None:intergenic 45.0%
AGCGGAAGAAGCTCATAGTT+TGG + chr2_4:20978632-20978651 Msa0320470:CDS 45.0%
GCGGAAGAAGCTCATAGTTT+GGG + chr2_4:20978633-20978652 Msa0320470:CDS 45.0%
CGGAAGAAGCTCATAGTTTG+GGG + chr2_4:20978634-20978653 Msa0320470:CDS 45.0%
TATCTCTCTTGCTTCCCCAA+GGG - chr2_4:20978781-20978800 None:intergenic 45.0%
ATATCTCTCTTGCTTCCCCA+AGG - chr2_4:20978782-20978801 None:intergenic 45.0%
CCAAAACTCAAGCGCAAAAG+CGG + chr2_4:20978811-20978830 Msa0320470:CDS 45.0%
CAAAACTCAAGCGCAAAAGC+GGG + chr2_4:20978812-20978831 Msa0320470:CDS 45.0%
CTCTCAACGAGGAACATCTA+AGG + chr2_4:20979067-20979086 Msa0320470:CDS 45.0%
CTCAAAAGGGGAGAAGAAAC+AGG - chr2_4:20979121-20979140 None:intergenic 45.0%
!! TTCTTCTCCCCTTTTGAGAG+AGG + chr2_4:20979123-20979142 Msa0320470:intron 45.0%
!! TCTTCTCCCCTTTTGAGAGA+GGG + chr2_4:20979124-20979143 Msa0320470:intron 45.0%
CTTACTCTCACTCAGTCACA+TGG - chr2_4:20979581-20979600 None:intergenic 45.0%
TGTGACTGAGTGAGAGTAAG+AGG + chr2_4:20979581-20979600 Msa0320470:intron 45.0%
GAGGTTGAAGGAAGAGAGAA+AGG + chr2_4:20979648-20979667 Msa0320470:CDS 45.0%
!! TCTGAAGGAGCTTAGTTCTG+TGG + chr2_4:20979718-20979737 Msa0320470:intron 45.0%
TCTAGGAACCAATCCACGAT+CGG - chr2_4:20980233-20980252 None:intergenic 45.0%
! GGTACCTTTGAGAAGAGAGA+TGG - chr2_4:20980533-20980552 None:intergenic 45.0%
AAGCTTCAAAGATGTGGACC+TGG + chr2_4:20980564-20980583 Msa0320470:CDS 45.0%
AGATGTGGACCTGGTTATAG+AGG + chr2_4:20980573-20980592 Msa0320470:CDS 45.0%
CCTCAAGTACCTCTATAACC+AGG - chr2_4:20980585-20980604 None:intergenic 45.0%
!! CCTGGTTATAGAGGTACTTG+AGG + chr2_4:20980582-20980601 Msa0320470:intron 45.0%
! GCTATTGGTTATGTTCCGAC+AGG + chr2_4:20980678-20980697 Msa0320470:intron 45.0%
! AGAAATGGGCTCCAACAATC+CGG - chr2_4:20980840-20980859 None:intergenic 45.0%
TTGTTGGAGCCCATTTCTTC+AGG + chr2_4:20980842-20980861 Msa0320470:CDS 45.0%
AGAAGTGGCATAACATGTGC+CGG - chr2_4:20981424-20981443 None:intergenic 45.0%
GTACGTACAATCTCCAGAAG+TGG - chr2_4:20981439-20981458 None:intergenic 45.0%
AGGAAAACTCCAGTGGTAGT+TGG + chr2_4:20981514-20981533 Msa0320470:CDS 45.0%
! TGAAGGTTGATTGACCTCGT+TGG + chr2_4:20981749-20981768 Msa0320470:intron 45.0%
GATCCTTCCACTTATGCAAG+AGG + chr2_4:20981841-20981860 Msa0320470:CDS 45.0%
!! GAACATTTCTGGTGTCTCTG+TGG + chr2_4:20982121-20982140 Msa0320470:CDS 45.0%
TCCCTCCTCTACTAGTTAAC+TGG + chr2_4:20982181-20982200 Msa0320470:intron 45.0%
!! CCTTTTTAGTCGCCGTTTCA+AGG - chr2_4:20982485-20982504 None:intergenic 45.0%
CCTTGAAACGGCGACTAAAA+AGG + chr2_4:20982482-20982501 Msa0320470:intron 45.0%
CTTCTTTCCTGTGGTGAATG+AGG + chr2_4:20982639-20982658 Msa0320470:CDS 45.0%
GATGAGACAAACCTGTAAGG+TGG - chr2_4:20982742-20982761 None:intergenic 45.0%
! ATATTCTGGGCTGACTCTCT+TGG + chr2_4:20982838-20982857 Msa0320470:CDS 45.0%
TCTTACCAATGGAATCCCCT+TGG - chr2_4:20982953-20982972 None:intergenic 45.0%
ACCCAACTGCATTGTCAGTT+TGG + chr2_4:20983048-20983067 Msa0320470:intron 45.0%
GACCAAACTGACAATGCAGT+TGG - chr2_4:20983053-20983072 None:intergenic 45.0%
GTCAGTTTGGTCATTGCTGT+TGG + chr2_4:20983061-20983080 Msa0320470:intron 45.0%
! TTGGTCATTGCTGTTGGAGT+AGG + chr2_4:20983067-20983086 Msa0320470:intron 45.0%
! TCATTGCTGTTGGAGTAGGA+TGG + chr2_4:20983071-20983090 Msa0320470:intron 45.0%
! TTGGAGTAGGATGGTCTTAC+TGG + chr2_4:20983080-20983099 Msa0320470:intron 45.0%
! TGGAGTAGGATGGTCTTACT+GGG + chr2_4:20983081-20983100 Msa0320470:intron 45.0%
AACACAAGGTCTCAGCTGAA+GGG - chr2_4:20983204-20983223 None:intergenic 45.0%
AAACACAAGGTCTCAGCTGA+AGG - chr2_4:20983205-20983224 None:intergenic 45.0%
!! TATTTAAAAATTATTCAAAT+TGG - chr2_4:20976519-20976538 None:intergenic 5.0%
!!! ATTATAATTTTAAATAGAAA+GGG - chr2_4:20983181-20983200 None:intergenic 5.0%
! GGCGAAAGGACACACTGTTT+TGG + chr2_4:20974799-20974818 Msa0320470:CDS 50.0%
GACATCGACACAACGGAACA+TGG - chr2_4:20975910-20975929 None:intergenic 50.0%
TGAAACACTAGAGGGCGAGA+GGG - chr2_4:20976122-20976141 None:intergenic 50.0%
! GGCCCACTTAAAGCATTCAC+CGG + chr2_4:20976898-20976917 Msa0320470:intron 50.0%
! CTGCCGGTGAATGCTTTAAG+TGG - chr2_4:20976904-20976923 None:intergenic 50.0%
! CACTTAAAGCATTCACCGGC+AGG + chr2_4:20976902-20976921 Msa0320470:intron 50.0%
CTCTCTCTACCTCGGCATAT+TGG - chr2_4:20976953-20976972 None:intergenic 50.0%
! ATCAAACGGCACTGAAGTCG+AGG + chr2_4:20977364-20977383 Msa0320470:intron 50.0%
TGTATCCCCTGTATATGGCC+AGG - chr2_4:20977562-20977581 None:intergenic 50.0%
TTTAGCGGGAAGGAAGCCTA+CGG + chr2_4:20977707-20977726 Msa0320470:intron 50.0%
! TGGGGGTTTAGAGCTTGCAA+TGG + chr2_4:20977758-20977777 Msa0320470:CDS 50.0%
GTGCAGTGCATGCCTGTTAT+AGG - chr2_4:20977861-20977880 None:intergenic 50.0%
CTTGGAGTAATTCCTGGAGG+TGG + chr2_4:20977925-20977944 Msa0320470:CDS 50.0%
AATTCCTGGAGGTGGAGGTA+TGG + chr2_4:20977933-20977952 Msa0320470:intron 50.0%
CAGAGACTTCCTCGTCTTGT+TGG + chr2_4:20978448-20978467 Msa0320470:CDS 50.0%
TCATCTCAAGTGCCTTTGCC+AGG - chr2_4:20978474-20978493 None:intergenic 50.0%
ATTTCAGCACGCCTATCCAG+TGG + chr2_4:20978548-20978567 Msa0320470:intron 50.0%
GCAGTGCTCACCAACTTATC+AGG - chr2_4:20978681-20978700 None:intergenic 50.0%
! CCACGATATCTAGAGCCCAT+TGG - chr2_4:20978707-20978726 None:intergenic 50.0%
!! CCAATGGGCTCTAGATATCG+TGG + chr2_4:20978704-20978723 Msa0320470:CDS 50.0%
!! CCGCTTTTGCGCTTGAGTTT+TGG - chr2_4:20978814-20978833 None:intergenic 50.0%
AACCTTCAAGAGTCCTGCAC+GGG - chr2_4:20978901-20978920 None:intergenic 50.0%
CAACCTTCAAGAGTCCTGCA+CGG - chr2_4:20978902-20978921 None:intergenic 50.0%
AAGGCTTCAGCTTCCTGCAA+AGG - chr2_4:20978996-20979015 None:intergenic 50.0%
CAGGAAGCTGAAGCCTTTGA+AGG + chr2_4:20978999-20979018 Msa0320470:intron 50.0%
! AGCTGAAGCCTTTGAAGGAC+TGG + chr2_4:20979004-20979023 Msa0320470:CDS 50.0%
! TGAAGCCTTTGAAGGACTGG+TGG + chr2_4:20979007-20979026 Msa0320470:CDS 50.0%
GACTCTCCCTCTCTCAAAAG+GGG - chr2_4:20979133-20979152 None:intergenic 50.0%
GGACTCTCCCTCTCTCAAAA+GGG - chr2_4:20979134-20979153 None:intergenic 50.0%
AGGACTCTCCCTCTCTCAAA+AGG - chr2_4:20979135-20979154 None:intergenic 50.0%
AATCCGGGTTCGCATCAATG+TGG + chr2_4:20979843-20979862 Msa0320470:intron 50.0%
CAACCACATTGATGCGAACC+CGG - chr2_4:20979849-20979868 None:intergenic 50.0%
CAACATCTCCTCGCATGAAC+AGG + chr2_4:20980195-20980214 Msa0320470:intron 50.0%
AATCCTTGGCGGAGGACTAA+TGG + chr2_4:20980270-20980289 Msa0320470:CDS 50.0%
ATCCTTGGCGGAGGACTAAT+GGG + chr2_4:20980271-20980290 Msa0320470:CDS 50.0%
CTCTGTTAACACCTGCTTCC+AGG - chr2_4:20980366-20980385 None:intergenic 50.0%
GAAGTGGCATAACATGTGCC+GGG - chr2_4:20981423-20981442 None:intergenic 50.0%
! GGCACATGTTATGCCACTTC+TGG + chr2_4:20981423-20981442 Msa0320470:CDS 50.0%
ACAGGTGAAGCAACTCGCAA+AGG + chr2_4:20982026-20982045 Msa0320470:intron 50.0%
TGGTGTCTCTGTGGATCCTA+AGG + chr2_4:20982130-20982149 Msa0320470:CDS 50.0%
CGGCGACTAAAAAGGAAGTG+AGG + chr2_4:20982490-20982509 Msa0320470:intron 50.0%
CAATGCCTTCATCAAGGACC+CGG - chr2_4:20982669-20982688 None:intergenic 50.0%
! GAATGGGCTTTCCACCTTAC+AGG + chr2_4:20982728-20982747 Msa0320470:CDS 50.0%
CTTCAAGCCCTCTGCCTATT+TGG + chr2_4:20982915-20982934 Msa0320470:CDS 50.0%
CTTGCAGCCAAATAGGCAGA+GGG - chr2_4:20982925-20982944 None:intergenic 50.0%
TCTTGCAGCCAAATAGGCAG+AGG - chr2_4:20982926-20982945 None:intergenic 50.0%
GAGGTTTGAGGGGACAATGA+TGG + chr2_4:20983253-20983272 Msa0320470:intron 50.0%
! TTTCATGTTGCAGGGTGCCT+CGG + chr2_4:20983391-20983410 Msa0320470:intron 50.0%
AAACACTAGAGGGCGAGAGG+GGG - chr2_4:20976120-20976139 None:intergenic 55.0%
GAAACACTAGAGGGCGAGAG+GGG - chr2_4:20976121-20976140 None:intergenic 55.0%
CTGAAACACTAGAGGGCGAG+AGG - chr2_4:20976123-20976142 None:intergenic 55.0%
ATGCCGAGGTAGAGAGAGAC+TGG + chr2_4:20976955-20976974 Msa0320470:intron 55.0%
CCTACGGTTGCTGCCATTGA+CGG + chr2_4:20977723-20977742 Msa0320470:CDS 55.0%
!! AAGCTCTAAACCCCCACCCA+AGG - chr2_4:20977754-20977773 None:intergenic 55.0%
!! CAAACCTAGCTGAGCACTGG+GGG - chr2_4:20977893-20977912 None:intergenic 55.0%
! GCAAACCTAGCTGAGCACTG+GGG - chr2_4:20977894-20977913 None:intergenic 55.0%
GGCAAACCTAGCTGAGCACT+GGG - chr2_4:20977895-20977914 None:intergenic 55.0%
AGGCAAACCTAGCTGAGCAC+TGG - chr2_4:20977896-20977915 None:intergenic 55.0%
GGAGTAATTCCTGGAGGTGG+AGG + chr2_4:20977928-20977947 Msa0320470:CDS 55.0%
TCATCCATACCTCCACCTCC+AGG - chr2_4:20977940-20977959 None:intergenic 55.0%
! ACTTCCTCGTCTTGTTGGCC+TGG + chr2_4:20978453-20978472 Msa0320470:CDS 55.0%
TTTGCCAGGCCAACAAGACG+AGG - chr2_4:20978460-20978479 None:intergenic 55.0%
! TCGTCTTGTTGGCCTGGCAA+AGG + chr2_4:20978459-20978478 Msa0320470:CDS 55.0%
TAGCAACCCATGGTCGTCGA+CGG - chr2_4:20978731-20978750 None:intergenic 55.0%
ACCTTCAAGAGTCCTGCACG+GGG - chr2_4:20978900-20978919 None:intergenic 55.0%
! CTTTGAAGGACTGGTGGCGT+CGG + chr2_4:20979013-20979032 Msa0320470:CDS 55.0%
TGAGAGAGGGAGAGTCCTCA+AGG + chr2_4:20979137-20979156 Msa0320470:intron 55.0%
TCCTCGCATGAACAGGTACC+TGG + chr2_4:20980202-20980221 Msa0320470:intron 55.0%
CCTCGCATGAACAGGTACCT+GGG + chr2_4:20980203-20980222 Msa0320470:intron 55.0%
CTCGCATGAACAGGTACCTG+GGG + chr2_4:20980204-20980223 Msa0320470:intron 55.0%
AATCCACGATCGGTAACCCC+AGG - chr2_4:20980223-20980242 None:intergenic 55.0%
TGGGGTTACCGATCGTGGAT+TGG + chr2_4:20980222-20980241 Msa0320470:CDS 55.0%
AAGGTTGCAATCCTTGGCGG+AGG + chr2_4:20980262-20980281 Msa0320470:CDS 55.0%
CTATGGTTGCCTCTACAGCC+CGG + chr2_4:20981402-20981421 Msa0320470:intron 55.0%
TAACATGTGCCGGGCTGTAG+AGG - chr2_4:20981414-20981433 None:intergenic 55.0%
GAATGCCCATGGGACCTTTC+AGG + chr2_4:20981653-20981672 Msa0320470:CDS 55.0%
!!! TGACCTCGTTGGTTTTGGCG+TGG + chr2_4:20981760-20981779 Msa0320470:CDS 55.0%
!!! GACCTCGTTGGTTTTGGCGT+GGG + chr2_4:20981761-20981780 Msa0320470:CDS 55.0%
!!! ACCTCGTTGGTTTTGGCGTG+GGG + chr2_4:20981762-20981781 Msa0320470:CDS 55.0%
GGCAGCTCTTGCAGCCAAAT+AGG - chr2_4:20982932-20982951 None:intergenic 55.0%
TTTGGCTGCAAGAGCTGCCA+AGG + chr2_4:20982933-20982952 Msa0320470:CDS 55.0%
TTGGCTGCAAGAGCTGCCAA+GGG + chr2_4:20982934-20982953 Msa0320470:CDS 55.0%
AGCTGCCAAGGGGATTCCAT+TGG + chr2_4:20982945-20982964 Msa0320470:CDS 55.0%
AACACTAGAGGGCGAGAGGG+GGG - chr2_4:20976119-20976138 None:intergenic 60.0%
CCGTCAATGGCAGCAACCGT+AGG - chr2_4:20977726-20977745 None:intergenic 60.0%
TGCCATTGACGGCCTTGCCT+TGG + chr2_4:20977734-20977753 Msa0320470:CDS 60.0%
GCCATTGACGGCCTTGCCTT+GGG + chr2_4:20977735-20977754 Msa0320470:CDS 60.0%
ACCCAAGGCAAGGCCGTCAA+TGG - chr2_4:20977739-20977758 None:intergenic 60.0%
ATTGACGGCCTTGCCTTGGG+TGG + chr2_4:20977738-20977757 Msa0320470:CDS 60.0%
TTGACGGCCTTGCCTTGGGT+GGG + chr2_4:20977739-20977758 Msa0320470:CDS 60.0%
CTAAACCCCCACCCAAGGCA+AGG - chr2_4:20977749-20977768 None:intergenic 60.0%
TCAACCCCCAGTGCTCAGCT+AGG + chr2_4:20977886-20977905 Msa0320470:CDS 60.0%
! TGGTGAGCACTGCTCGCCAA+TGG + chr2_4:20978688-20978707 Msa0320470:CDS 60.0%
! GGTGAGCACTGCTCGCCAAT+GGG + chr2_4:20978689-20978708 Msa0320470:CDS 60.0%
ATAGTTGCTGGTCCCCGTGC+AGG + chr2_4:20978885-20978904 Msa0320470:CDS 60.0%
TCCCCGTGCAGGACTCTTGA+AGG + chr2_4:20978896-20978915 Msa0320470:CDS 60.0%
CGACGCCACCAGTCCTTCAA+AGG - chr2_4:20979015-20979034 None:intergenic 60.0%
CCCAGGTACCTGTTCATGCG+AGG - chr2_4:20980206-20980225 None:intergenic 60.0%
GTACCTGGGGTTACCGATCG+TGG + chr2_4:20980217-20980236 Msa0320470:CDS 60.0%
AGCCCATTAGTCCTCCGCCA+AGG - chr2_4:20980276-20980295 None:intergenic 60.0%
!!! CCTCGTTGGTTTTGGCGTGG+GGG + chr2_4:20981763-20981782 Msa0320470:CDS 60.0%
CTGTGGTGAATGAGGCCTGC+CGG + chr2_4:20982647-20982666 Msa0320470:CDS 60.0%
TGTGGTGAATGAGGCCTGCC+GGG + chr2_4:20982648-20982667 Msa0320470:CDS 60.0%
TGGCTGCAAGAGCTGCCAAG+GGG + chr2_4:20982935-20982954 Msa0320470:CDS 60.0%
TGACTGCGCTTGATCCACCG+AGG - chr2_4:20983411-20983430 None:intergenic 60.0%
TGACGGCCTTGCCTTGGGTG+GGG + chr2_4:20977740-20977759 Msa0320470:CDS 65.0%
TCGTGGACCGTCGACGACCA+TGG + chr2_4:20978721-20978740 Msa0320470:CDS 65.0%
CGTGGACCGTCGACGACCAT+GGG + chr2_4:20978722-20978741 Msa0320470:CDS 65.0%
!! GGCGGAGGACTAATGGGCTC+CGG + chr2_4:20980277-20980296 Msa0320470:CDS 65.0%
CCCCCACGCCAAAACCAACG+AGG - chr2_4:20981766-20981785 None:intergenic 65.0%
CGGCAGGCCTCATTCACCAC+AGG - chr2_4:20982649-20982668 None:intergenic 65.0%
GCCTGCCGGGTCCTTGATGA+AGG + chr2_4:20982661-20982680 Msa0320470:CDS 65.0%
GCCTTCATCAAGGACCCGGC+AGG - chr2_4:20982665-20982684 None:intergenic 65.0%
! CATGTTGCAGGGTGCCTCGG+TGG + chr2_4:20983394-20983413 Msa0320470:intron 65.0%
GACGGCCTTGCCTTGGGTGG+GGG + chr2_4:20977741-20977760 Msa0320470:CDS 70.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 20974641 20983784 20974641 ID=Msa0320470;Name=Msa0320470
chr2_4 mRNA 20974641 20983784 20974641 ID=Msa0320470-mRNA-1;Parent=Msa0320470;Name=Msa0320470-mRNA-1;_AED=0.13;_eAED=0.13;_QI=156|0.84|0.9|0.9|1|1|20|345|770
chr2_4 exon 20974641 20974890 20974641 ID=Msa0320470-mRNA-1:exon:7661;Parent=Msa0320470-mRNA-1
chr2_4 exon 20976135 20976206 20976135 ID=Msa0320470-mRNA-1:exon:7662;Parent=Msa0320470-mRNA-1
chr2_4 exon 20977420 20977485 20977420 ID=Msa0320470-mRNA-1:exon:7663;Parent=Msa0320470-mRNA-1
chr2_4 exon 20977574 20977627 20977574 ID=Msa0320470-mRNA-1:exon:7664;Parent=Msa0320470-mRNA-1
chr2_4 exon 20977712 20977779 20977712 ID=Msa0320470-mRNA-1:exon:7665;Parent=Msa0320470-mRNA-1
chr2_4 exon 20977868 20977949 20977868 ID=Msa0320470-mRNA-1:exon:7666;Parent=Msa0320470-mRNA-1
chr2_4 exon 20978443 20978498 20978443 ID=Msa0320470-mRNA-1:exon:7667;Parent=Msa0320470-mRNA-1
chr2_4 exon 20978615 20978917 20978615 ID=Msa0320470-mRNA-1:exon:7668;Parent=Msa0320470-mRNA-1
chr2_4 exon 20979002 20979088 20979002 ID=Msa0320470-mRNA-1:exon:7669;Parent=Msa0320470-mRNA-1
chr2_4 exon 20979375 20979482 20979375 ID=Msa0320470-mRNA-1:exon:7670;Parent=Msa0320470-mRNA-1
chr2_4 exon 20979631 20979669 20979631 ID=Msa0320470-mRNA-1:exon:7671;Parent=Msa0320470-mRNA-1
chr2_4 exon 20980217 20980391 20980217 ID=Msa0320470-mRNA-1:exon:7672;Parent=Msa0320470-mRNA-1
chr2_4 exon 20980473 20980594 20980473 ID=Msa0320470-mRNA-1:exon:7673;Parent=Msa0320470-mRNA-1
chr2_4 exon 20980700 20980863 20980700 ID=Msa0320470-mRNA-1:exon:7674;Parent=Msa0320470-mRNA-1
chr2_4 exon 20981420 20981674 20981420 ID=Msa0320470-mRNA-1:exon:7675;Parent=Msa0320470-mRNA-1
chr2_4 exon 20981754 20981875 20981754 ID=Msa0320470-mRNA-1:exon:7676;Parent=Msa0320470-mRNA-1
chr2_4 exon 20982030 20982151 20982030 ID=Msa0320470-mRNA-1:exon:7677;Parent=Msa0320470-mRNA-1
chr2_4 exon 20982601 20982749 20982601 ID=Msa0320470-mRNA-1:exon:7678;Parent=Msa0320470-mRNA-1
chr2_4 exon 20982828 20982966 20982828 ID=Msa0320470-mRNA-1:exon:7679;Parent=Msa0320470-mRNA-1
chr2_4 exon 20983404 20983784 20983404 ID=Msa0320470-mRNA-1:exon:7680;Parent=Msa0320470-mRNA-1
chr2_4 five_prime_UTR 20974641 20974796 20974641 ID=Msa0320470-mRNA-1:five_prime_utr;Parent=Msa0320470-mRNA-1
chr2_4 CDS 20974797 20974890 20974797 ID=Msa0320470-mRNA-1:cds;Parent=Msa0320470-mRNA-1
chr2_4 CDS 20976135 20976206 20976135 ID=Msa0320470-mRNA-1:cds;Parent=Msa0320470-mRNA-1
chr2_4 CDS 20977420 20977485 20977420 ID=Msa0320470-mRNA-1:cds;Parent=Msa0320470-mRNA-1
chr2_4 CDS 20977574 20977627 20977574 ID=Msa0320470-mRNA-1:cds;Parent=Msa0320470-mRNA-1
chr2_4 CDS 20977712 20977779 20977712 ID=Msa0320470-mRNA-1:cds;Parent=Msa0320470-mRNA-1
chr2_4 CDS 20977868 20977949 20977868 ID=Msa0320470-mRNA-1:cds;Parent=Msa0320470-mRNA-1
chr2_4 CDS 20978443 20978498 20978443 ID=Msa0320470-mRNA-1:cds;Parent=Msa0320470-mRNA-1
chr2_4 CDS 20978615 20978917 20978615 ID=Msa0320470-mRNA-1:cds;Parent=Msa0320470-mRNA-1
chr2_4 CDS 20979002 20979088 20979002 ID=Msa0320470-mRNA-1:cds;Parent=Msa0320470-mRNA-1
chr2_4 CDS 20979375 20979482 20979375 ID=Msa0320470-mRNA-1:cds;Parent=Msa0320470-mRNA-1
chr2_4 CDS 20979631 20979669 20979631 ID=Msa0320470-mRNA-1:cds;Parent=Msa0320470-mRNA-1
chr2_4 CDS 20980217 20980391 20980217 ID=Msa0320470-mRNA-1:cds;Parent=Msa0320470-mRNA-1
chr2_4 CDS 20980473 20980594 20980473 ID=Msa0320470-mRNA-1:cds;Parent=Msa0320470-mRNA-1
chr2_4 CDS 20980700 20980863 20980700 ID=Msa0320470-mRNA-1:cds;Parent=Msa0320470-mRNA-1
chr2_4 CDS 20981420 20981674 20981420 ID=Msa0320470-mRNA-1:cds;Parent=Msa0320470-mRNA-1
chr2_4 CDS 20981754 20981875 20981754 ID=Msa0320470-mRNA-1:cds;Parent=Msa0320470-mRNA-1
chr2_4 CDS 20982030 20982151 20982030 ID=Msa0320470-mRNA-1:cds;Parent=Msa0320470-mRNA-1
chr2_4 CDS 20982601 20982749 20982601 ID=Msa0320470-mRNA-1:cds;Parent=Msa0320470-mRNA-1
chr2_4 CDS 20982828 20982966 20982828 ID=Msa0320470-mRNA-1:cds;Parent=Msa0320470-mRNA-1
chr2_4 CDS 20983404 20983439 20983404 ID=Msa0320470-mRNA-1:cds;Parent=Msa0320470-mRNA-1
chr2_4 three_prime_UTR 20983440 20983784 20983440 ID=Msa0320470-mRNA-1:three_prime_utr;Parent=Msa0320470-mRNA-1
Gene Sequence

>Msa0320470

ATGGCGAAAGGACACACTGTTTTGGAAGTTGGAGCTGATGGTGTTGCCATCATCACCATCGTCAATCCTCCTGTCAATTCTCTCTCTTTTGATGTGTTTCAGAGTTTAAAGGAGAGTTTTGACGAGGCTCACAAGAGAGAAGATGTCAAGGCAATTGTTGTTACAGGTGCGAAGGGAAAATTTTCTGGCGGTTTTGATATTAATGCATTTGGCCTAATACAAAAGGGATTAGGGGATACAAAGCCTGGTTTGATATCAATAGAACTCCAAACTAATACTATAGAAGCGGGAAGGAAGCCTACGGTTGCTGCCATTGACGGCCTTGCCTTGGGTGGGGGTTTAGAGCTTGCAATGGCATGCACTGCACGGATATCAACCCCCAGTGCTCAGCTAGGTTTGCCTGAACTTCAACTTGGAGTAATTCCTGGAGGTGGAGGAACGCAGAGACTTCCTCGTCTTGTTGGCCTGGCAAAGGCACTTGAGATGATGCTGACCTCAAAGGCAATCAAAGCGGAAGAAGCTCATAGTTTGGGGCTTGTAGACGTTTTAGTGTCACCTGATAAGTTGGTGAGCACTGCTCGCCAATGGGCTCTAGATATCGTGGACCGTCGACGACCATGGGTTGCTAGTCTTTACAAGACTGACAAAATAGAATCCCTTGGGGAAGCAAGAGAGATATTGAAGTTTGCCAAAACTCAAGCGCAAAAGCGGGCTCCTAATCTTAAGCACCCTTTGGTTTGTATTGATGTTATTGAACATGGAATAGTTGCTGGTCCCCGTGCAGGACTCTTGAAGGAAGCTGAAGCCTTTGAAGGACTGGTGGCGTCGGATACTTGCAAGAGCTTGATTCACATATTTTTCTCTCAACGAGGAACATCTAAGGTTTATAAAAATGTTAAAAGCGAGAGACCATTGCAAGCTGTCACATTCAAAGAGAGCAACTGTAGTTCAACAAGATATATCATGTGTGATAGGACTCTTATTGAGAAGGGAAATTCTGTTATAAGGAGGTTGAAGGAAGAGAGAAAGGTACCTGGGGTTACCGATCGTGGATTGGTTCCTAGACAAGTGAAAAAGGTTGCAATCCTTGGCGGAGGACTAATGGGCTCCGGAATAGCAACTGCTTTAATTCTTGGTAACTATCCTGTTATCTTGAAAGAAGTAAATGAAAAATTCCTGGAAGCAGGTGTTAACAGAGTTAAAGCAAATTTACAAAGCCGTGTCAAGAAAGGGCAAATGACTAAGGAAAAATTTGAAAAAACCATCTCTCTTCTCAAAGGTACCATTGACTATGAAAGCTTCAAAGATGTGGACCTGGTTATAGAGGCTGTTATTGAGAATGTTGCCTTAAAGCAACAGATCTTTGCTGACCTTGAAAAGTATTGTCCTCCTCATTGTATACTTGCAAGTAACACTTCCACAATCGACTTGAACCTGATTGGAAAGAATACTAAATCTGAAGACCGGATTGTTGGAGCCCATTTCTTCAGCCCGGCACATGTTATGCCACTTCTGGAGATTGTACGTACTAAACAGACATCTCCGCAAGTAGTAGTTGACTTGCTAGATATTGGAAGGAAGATAAGGAAAACTCCAGTGGTAGTTGGAAATTGTACTGGATTTGCTGTTAATAGGATGTTCTTCCCATATACACAAGCAGCCATGTTTCTTATTGAACATGGTGCAGATGTTTATCAAATTGATAAGGCAGTAACTAAGTTTGGAATGCCCATGGGACCTTTCAGGTTGATTGACCTCGTTGGTTTTGGCGTGGGGGTTGCAACTGCCATGCAATTTATTGAGAATTTCCCTGAGCGAACTTACAAATCAATGATCCTTCCACTTATGCAAGAGGATAAAAGAGCAGGTGAAGCAACTCGCAAAGGATTTTATTTGTACGATGATAAACGTAGGGCTAATCCTGATCCAGAGTTGAAGAATTATATTGAGAAGTCTAGGAACATTTCTGGTGTCTCTGTGGATCCTAAGCTTGTAAAACTATCAGAAAAGGACATCATAGAGATGATCTTCTTTCCTGTGGTGAATGAGGCCTGCCGGGTCCTTGATGAAGGCATTGCAGTTAAAGCAGCAGATCTTGATATTTCAGCTGTTATGGGAATGGGCTTTCCACCTTACAGGGGAGGTATCATATTCTGGGCTGACTCTCTTGGATCCAAGTACATATACTCAAGATTGGCTGAATGGTCAAAACTATATGGAGAATTCTTCAAGCCCTCTGCCTATTTGGCTGCAAGAGCTGCCAAGGGGATTCCATTGGGTGCCTCGGTGGATCAAGCGCAGTCACGATTATAA

Protein sequence

>Msa0320470

MAKGHTVLEVGADGVAIITIVNPPVNSLSFDVFQSLKESFDEAHKREDVKAIVVTGAKGKFSGGFDINAFGLIQKGLGDTKPGLISIELQTNTIEAGRKPTVAAIDGLALGGGLELAMACTARISTPSAQLGLPELQLGVIPGGGGTQRLPRLVGLAKALEMMLTSKAIKAEEAHSLGLVDVLVSPDKLVSTARQWALDIVDRRRPWVASLYKTDKIESLGEAREILKFAKTQAQKRAPNLKHPLVCIDVIEHGIVAGPRAGLLKEAEAFEGLVASDTCKSLIHIFFSQRGTSKVYKNVKSERPLQAVTFKESNCSSTRYIMCDRTLIEKGNSVIRRLKEERKVPGVTDRGLVPRQVKKVAILGGGLMGSGIATALILGNYPVILKEVNEKFLEAGVNRVKANLQSRVKKGQMTKEKFEKTISLLKGTIDYESFKDVDLVIEAVIENVALKQQIFADLEKYCPPHCILASNTSTIDLNLIGKNTKSEDRIVGAHFFSPAHVMPLLEIVRTKQTSPQVVVDLLDIGRKIRKTPVVVGNCTGFAVNRMFFPYTQAAMFLIEHGADVYQIDKAVTKFGMPMGPFRLIDLVGFGVGVATAMQFIENFPERTYKSMILPLMQEDKRAGEATRKGFYLYDDKRRANPDPELKNYIEKSRNISGVSVDPKLVKLSEKDIIEMIFFPVVNEACRVLDEGIAVKAADLDISAVMGMGFPPYRGGIIFWADSLGSKYIYSRLAEWSKLYGEFFKPSAYLAARAAKGIPLGASVDQAQSRL*