AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0139670

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0139670 MtrunA17_Chr8g0344961 95.550 382 17 0 1 382 1 382 0.0 692
Msa0139670 MtrunA17_Chr2g0334031 78.701 385 61 6 1 382 1 367 0.0 569
Msa0139670 MtrunA17_Chr1g0195151 46.465 198 56 5 1 195 1 151 1.17e-43 153
Msa0139670 MtrunA17_Chr2g0295421 77.465 71 16 0 117 187 89 159 5.20e-32 121
Msa0139670 MtrunA17_Chr7g0221471 68.657 67 21 0 115 181 42 108 5.75e-28 108
Msa0139670 MtrunA17_Chr7g0221501 68.657 67 21 0 115 181 42 108 8.42e-28 107
Msa0139670 MtrunA17_Chr4g0044881 74.603 63 16 0 118 180 108 170 1.01e-27 109
Msa0139670 MtrunA17_Chr4g0044871 78.947 57 12 0 124 180 96 152 1.18e-26 106
Msa0139670 MtrunA17_Chr4g0044901 78.947 57 12 0 124 180 96 152 4.56e-26 104
Msa0139670 MtrunA17_Chr8g0383591 66.667 75 21 1 107 181 132 202 1.40e-25 105
Msa0139670 MtrunA17_Chr4g0044911 77.193 57 13 0 124 180 96 152 1.48e-25 103
Msa0139670 MtrunA17_Chr2g0283171 58.974 78 31 1 116 192 55 132 2.70e-24 97.8
Msa0139670 MtrunA17_Chr3g0099871 66.154 65 22 0 120 184 23 87 4.36e-24 99.4
Msa0139670 MtrunA17_Chr2g0282621 66.197 71 23 1 116 186 7 76 5.94e-24 97.4
Msa0139670 MtrunA17_Chr2g0316931 69.355 62 19 0 119 180 26 87 9.44e-24 97.8
Msa0139670 MtrunA17_Chr2g0282651 68.852 61 19 0 120 180 66 126 1.50e-23 98.2
Msa0139670 MtrunA17_Chr8g0375031 55.172 87 37 2 113 198 115 200 1.95e-23 97.4
Msa0139670 MtrunA17_Chr5g0396911 45.536 112 59 1 123 232 111 222 2.62e-23 99.0
Msa0139670 MtrunA17_Chr4g0046161 61.429 70 26 1 114 182 47 116 1.28e-22 92.0
Msa0139670 MtrunA17_Chr1g0196871 57.500 80 33 1 111 189 3 82 1.33e-22 91.3
Msa0139670 MtrunA17_Chr4g0026881 42.568 148 77 3 47 193 27 167 1.46e-22 95.5
Msa0139670 MtrunA17_Chr2g0283181 58.427 89 31 3 108 191 129 216 1.61e-22 96.3
Msa0139670 MtrunA17_Chr4g0055781 68.750 64 19 1 121 183 99 162 1.62e-22 95.5
Msa0139670 MtrunA17_Chr4g0055801 67.692 65 20 1 120 183 150 214 1.96e-22 96.3
Msa0139670 MtrunA17_Chr2g0297331 68.852 61 18 1 123 182 13 73 8.32e-22 90.1
Msa0139670 MtrunA17_Chr1g0158971 50.538 93 38 1 92 184 91 175 1.05e-21 95.1
Msa0139670 MtrunA17_Chr7g0261101 68.750 64 19 1 120 182 16 79 1.06e-21 90.1
Msa0139670 MtrunA17_Chr1g0184081 66.154 65 21 1 123 186 20 84 1.16e-21 90.1
Msa0139670 MtrunA17_Chr4g0002631 51.190 84 39 1 121 202 5 88 1.72e-21 91.3
Msa0139670 MtrunA17_Chr8g0335321 66.667 60 19 1 123 181 95 154 1.74e-21 91.7
Msa0139670 MtrunA17_Chr8g0335331 71.186 59 16 1 124 181 125 183 2.00e-21 91.3
Msa0139670 MtrunA17_Chr1g0186731 61.429 70 26 1 114 182 11 80 2.00e-21 89.7
Msa0139670 MtrunA17_Chr4g0055761 56.790 81 32 2 103 180 122 202 2.67e-21 92.4
Msa0139670 MtrunA17_Chr3g0131601 42.742 124 63 1 64 187 24 139 3.76e-21 92.0
Msa0139670 MtrunA17_Chr5g0438801 43.925 107 60 0 74 180 1 107 5.57e-21 92.0
Msa0139670 MtrunA17_Chr1g0170531 54.217 83 37 1 99 180 64 146 6.02e-21 90.5
Msa0139670 MtrunA17_Chr5g0438831 68.966 58 18 0 123 180 45 102 6.46e-21 91.7
Msa0139670 MtrunA17_Chr7g0250731 66.667 60 19 1 123 181 60 119 7.32e-21 89.7
Msa0139670 MtrunA17_Chr7g0261151 70.492 61 17 1 123 182 19 79 8.61e-21 87.8
Msa0139670 MtrunA17_Chr7g0250721 66.667 60 19 1 123 181 60 119 1.03e-20 89.4
Msa0139670 MtrunA17_Chr8g0382491 38.926 149 72 4 102 247 96 228 1.33e-20 90.9
Msa0139670 MtrunA17_Chr8g0335311 55.844 77 26 2 122 190 94 170 1.46e-20 88.6
Msa0139670 MtrunA17_Chr7g0250711 66.667 60 19 1 123 181 59 118 1.53e-20 89.0
Msa0139670 MtrunA17_Chr1g0186671 68.852 61 18 1 123 182 18 78 1.89e-20 86.7
Msa0139670 MtrunA17_Chr5g0425561 53.165 79 32 1 102 180 156 229 2.14e-20 91.7
Msa0139670 MtrunA17_Chr5g0437671 62.295 61 23 0 121 181 82 142 2.76e-20 91.7
Msa0139670 MtrunA17_Chr4g0055951 57.353 68 29 0 118 185 68 135 5.45e-20 88.6
Msa0139670 MtrunA17_Chr8g0387801 68.421 57 18 0 123 179 106 162 5.59e-20 89.7
Msa0139670 MtrunA17_Chr7g0257911 62.712 59 22 0 123 181 30 88 5.97e-20 89.0
Msa0139670 MtrunA17_Chr3g0126321 59.155 71 24 1 123 188 112 182 6.58e-20 90.1
Msa0139670 MtrunA17_Chr3g0115631 51.163 86 25 1 95 180 138 206 6.76e-20 89.7
Msa0139670 MtrunA17_Chr8g0390091 56.000 75 30 1 112 183 22 96 7.11e-20 87.8
Msa0139670 MtrunA17_Chr2g0324131 65.517 58 20 0 124 181 218 275 7.66e-20 90.5
Msa0139670 MtrunA17_Chr5g0412641 66.667 57 19 0 123 179 45 101 8.15e-20 89.7
Msa0139670 MtrunA17_Chr1g0189941 46.591 88 34 2 111 188 1 85 9.76e-20 85.5
Msa0139670 MtrunA17_Chr3g0129421 69.863 73 18 1 109 181 159 227 1.98e-19 88.6
Msa0139670 MtrunA17_Chr7g0232261 51.948 77 30 1 114 183 44 120 2.09e-19 86.3
Msa0139670 MtrunA17_Chr3g0137174 58.333 60 25 0 121 180 5 64 2.56e-19 85.1
Msa0139670 MtrunA17_Chr3g0134161 52.000 75 36 0 107 181 28 102 2.71e-19 84.3
Msa0139670 MtrunA17_Chr6g0486701 60.345 58 23 0 124 181 44 101 2.71e-19 85.9
Msa0139670 MtrunA17_Chr4g0026931 61.765 68 25 1 117 183 124 191 3.46e-19 86.7
Msa0139670 MtrunA17_Chr8g0367911 63.158 57 21 0 123 179 43 99 3.46e-19 87.0
Msa0139670 MtrunA17_Chr5g0399441 58.333 60 25 0 124 183 28 87 3.92e-19 84.3
Msa0139670 MtrunA17_Chr3g0083501 68.627 51 16 0 131 181 2 52 4.11e-19 80.9
Msa0139670 MtrunA17_Chr2g0331231 45.977 87 37 1 107 183 14 100 4.41e-19 84.7
Msa0139670 MtrunA17_Chr8g0350701 45.918 98 44 2 116 207 19 113 5.28e-19 86.7
Msa0139670 MtrunA17_Chr5g0432821 59.677 62 25 0 119 180 119 180 5.49e-19 86.3
Msa0139670 MtrunA17_Chr2g0323171 58.333 60 25 0 121 180 62 121 6.06e-19 84.0
Msa0139670 MtrunA17_Chr1g0196781 54.167 72 33 0 120 191 148 219 6.08e-19 86.7
Msa0139670 MtrunA17_Chr1g0170471 43.220 118 66 1 73 189 32 149 6.80e-19 83.6
Msa0139670 MtrunA17_Chr7g0275841 42.857 84 46 1 102 183 4 87 9.77e-19 82.8
Msa0139670 MtrunA17_Chr1g0183981 43.966 116 45 4 80 194 43 139 9.79e-19 84.0
Msa0139670 MtrunA17_Chr4g0062161 50.000 74 37 0 107 180 36 109 1.05e-18 83.6
Msa0139670 MtrunA17_Chr4g0062551 50.000 74 37 0 107 180 36 109 1.06e-18 82.0
Msa0139670 MtrunA17_Chr3g0140161 60.000 60 24 0 124 183 43 102 1.06e-18 83.2
Msa0139670 MtrunA17_Chr8g0340311 60.345 58 23 0 124 181 47 104 1.20e-18 83.6
Msa0139670 MtrunA17_Chr4g0017851 37.815 119 63 2 77 190 77 189 1.26e-18 85.5
Msa0139670 MtrunA17_Chr1g0184031 48.864 88 37 2 108 194 68 148 1.47e-18 84.0
Msa0139670 MtrunA17_Chr1g0184011 50.000 98 34 3 98 194 65 148 1.75e-18 83.6
Msa0139670 MtrunA17_Chr4g0023411 54.054 74 32 1 124 195 65 138 1.89e-18 82.8
Msa0139670 MtrunA17_Chr8g0378811 40.187 107 63 1 107 213 39 144 2.09e-18 84.3
Msa0139670 MtrunA17_Chr7g0261181 47.321 112 52 2 113 223 2 107 2.16e-18 80.9
Msa0139670 MtrunA17_Chr4g0063751 62.069 58 22 0 123 180 6 63 2.24e-18 83.2
Msa0139670 MtrunA17_Chr1g0183961 69.565 69 18 2 123 188 26 94 2.98e-18 80.9
Msa0139670 MtrunA17_Chr4g0003421 62.069 58 22 0 123 180 39 96 3.05e-18 83.6
Msa0139670 MtrunA17_Chr7g0252381 54.667 75 33 1 123 196 41 115 4.15e-18 83.6
Msa0139670 MtrunA17_Chr1g0186681 66.129 62 19 2 123 182 18 79 4.25e-18 80.1
Msa0139670 MtrunA17_Chr6g0461271 45.349 86 43 1 109 190 18 103 4.50e-18 84.0
Msa0139670 MtrunA17_Chr5g0437371 61.017 59 23 0 121 179 63 121 6.08e-18 84.0
Msa0139670 MtrunA17_Chr7g0217991 48.864 88 44 1 117 204 36 122 7.08e-18 85.1
Msa0139670 MtrunA17_Chr8g0334801 48.718 78 31 1 113 181 32 109 1.01e-17 80.9
Msa0139670 MtrunA17_Chr2g0333011 60.345 58 23 0 123 180 6 63 1.08e-17 80.1
Msa0139670 MtrunA17_Chr2g0301191 43.373 83 47 0 116 198 11 93 1.91e-17 80.5
Msa0139670 MtrunA17_Chr7g0253424 50.685 73 32 1 122 190 37 109 1.98e-17 81.6
Msa0139670 MtrunA17_Chr2g0286161 55.882 68 25 1 117 179 38 105 2.70e-17 81.6
Msa0139670 MtrunA17_Chr8g0346741 51.562 64 31 0 120 183 35 98 3.46e-17 79.0
Msa0139670 MtrunA17_Chr4g0066931 49.333 75 36 1 107 179 34 108 3.56e-17 82.0
Msa0139670 MtrunA17_Chr6g0453661 49.351 77 34 1 118 189 32 108 3.68e-17 82.4
Msa0139670 MtrunA17_Chr6g0461941 73.770 61 16 0 120 180 16 76 3.99e-17 79.3
Msa0139670 MtrunA17_Chr4g0042761 53.226 62 29 0 118 179 42 103 4.40e-17 81.3
Msa0139670 MtrunA17_Chr8g0345531 61.111 54 19 1 118 171 110 161 5.28e-17 81.6
Msa0139670 MtrunA17_Chr7g0265851 50.000 76 33 1 120 190 20 95 6.39e-17 78.6
Msa0139670 MtrunA17_Chr1g0183931 51.613 93 41 2 98 189 78 167 6.43e-17 79.7
Msa0139670 MtrunA17_Chr7g0261201 59.211 76 30 1 117 191 91 166 6.48e-17 79.3
Msa0139670 MtrunA17_Chr1g0153151 58.621 58 24 0 124 181 44 101 7.51e-17 77.8
Msa0139670 MtrunA17_Chr2g0301171 41.463 82 48 0 117 198 12 93 1.33e-16 77.8
Msa0139670 MtrunA17_Chr1g0184071 51.852 81 31 2 115 194 60 133 1.41e-16 77.0
Msa0139670 MtrunA17_Chr3g0142081 48.454 97 47 2 124 220 39 132 1.83e-16 77.8
Msa0139670 MtrunA17_Chr1g0184061 46.875 96 42 2 98 192 59 146 1.91e-16 77.8
Msa0139670 MtrunA17_Chr1g0167781 48.889 90 45 1 94 182 52 141 2.28e-16 77.4
Msa0139670 MtrunA17_Chr1g0205961 46.053 76 37 1 116 187 107 182 2.98e-16 79.3
Msa0139670 MtrunA17_Chr5g0401871 55.932 59 26 0 123 181 24 82 3.01e-16 76.3
Msa0139670 MtrunA17_Chr1g0150671 54.386 57 26 0 124 180 46 102 3.61e-16 78.2
Msa0139670 MtrunA17_Chr1g0150691 54.386 57 26 0 124 180 22 78 4.37e-16 76.6
Msa0139670 MtrunA17_Chr1g0150631 54.386 57 26 0 124 180 38 94 6.05e-16 76.6
Msa0139670 MtrunA17_Chr7g0261171 51.807 83 39 1 102 183 63 145 7.08e-16 76.3
Msa0139670 MtrunA17_Chr1g0150661 52.632 57 27 0 124 180 35 91 7.62e-16 76.3
Msa0139670 MtrunA17_Chr1g0155751 63.793 58 21 0 124 181 39 96 8.20e-16 77.0
Msa0139670 MtrunA17_Chr1g0200931 54.839 62 27 1 119 179 18 79 9.93e-16 73.6
Msa0139670 MtrunA17_Chr1g0209891 55.172 58 24 1 116 173 46 101 1.33e-15 76.6
Msa0139670 MtrunA17_Chr6g0473881 43.902 82 43 1 114 192 100 181 1.65e-15 76.6
Msa0139670 MtrunA17_Chr6g0473931 46.341 82 41 1 114 192 23 104 2.11e-15 74.3
Msa0139670 MtrunA17_Chr6g0473941 45.122 82 42 1 114 192 23 104 3.34e-15 73.9
Msa0139670 MtrunA17_Chr1g0203861 43.590 78 44 0 106 183 26 103 3.66e-15 73.6
Msa0139670 MtrunA17_Chr2g0301181 40.217 92 51 2 104 194 2 90 4.23e-15 73.9
Msa0139670 MtrunA17_Chr6g0473781 45.882 85 41 1 114 198 47 126 4.93e-15 73.9
Msa0139670 MtrunA17_Chr6g0473741 48.571 70 36 0 114 183 56 125 4.98e-15 73.9
Msa0139670 MtrunA17_Chr3g0136551 47.541 61 32 0 119 179 60 120 8.94e-15 73.9
Msa0139670 MtrunA17_Chr1g0201671 55.696 79 29 1 131 209 146 218 1.07e-14 74.7
Msa0139670 MtrunA17_Chr6g0473971 29.012 162 79 5 117 246 47 204 1.27e-14 73.2
Msa0139670 MtrunA17_Chr6g0473961 42.683 82 44 1 114 192 44 125 1.29e-14 72.4
Msa0139670 MtrunA17_Chr4g0057241 52.055 73 31 2 119 188 10 81 1.32e-14 71.2
Msa0139670 MtrunA17_Chr8g0345551 60.000 50 20 0 117 166 110 159 1.39e-14 74.3
Msa0139670 MtrunA17_Chr6g0486711 65.517 58 20 0 124 181 49 106 1.72e-14 72.4
Msa0139670 MtrunA17_Chr1g0146191 53.425 73 34 0 109 181 32 104 2.44e-14 72.4
Msa0139670 MtrunA17_Chr1g0149331 49.451 91 31 2 120 210 3 78 2.84e-14 70.9
Msa0139670 MtrunA17_Chr1g0186741 60.000 65 25 1 119 182 68 132 2.86e-14 71.2
Msa0139670 MtrunA17_Chr6g0473771 38.298 94 49 2 99 183 9 102 4.07e-14 68.6
Msa0139670 MtrunA17_Chr6g0473981 43.038 79 42 1 117 192 47 125 4.61e-14 71.2
Msa0139670 MtrunA17_Chr7g0243431 52.381 63 23 1 124 179 78 140 6.63e-14 73.2
Msa0139670 MtrunA17_Chr3g0108241 53.846 78 33 2 120 196 111 186 9.15e-14 70.9
Msa0139670 MtrunA17_Chr6g0473861 39.000 100 56 2 120 216 59 156 1.01e-13 70.9
Msa0139670 MtrunA17_Chr5g0396191 56.667 60 26 0 124 183 11 70 1.11e-13 68.9
Msa0139670 MtrunA17_Chr5g0422501 42.169 83 46 1 97 179 80 160 2.26e-13 71.2
Msa0139670 MtrunA17_Chr6g0474001 41.772 79 43 1 117 192 47 125 2.56e-13 69.7
Msa0139670 MtrunA17_Chr6g0464581 76.471 51 12 0 131 181 187 237 3.35e-13 70.5
Msa0139670 MtrunA17_Chr3g0136541 50.000 54 27 0 126 179 42 95 5.51e-13 68.2
Msa0139670 MtrunA17_Chr5g0438841 53.448 58 27 0 123 180 15 72 1.00e-12 65.9
Msa0139670 MtrunA17_Chr1g0186711 56.061 66 28 1 123 187 16 81 1.30e-12 64.3
Msa0139670 MtrunA17_Chr1g0186721 56.061 66 28 1 123 187 16 81 2.09e-12 63.5
Msa0139670 MtrunA17_Chr5g0423811 41.975 81 39 1 107 179 71 151 2.59e-12 67.0
Msa0139670 MtrunA17_Chr5g0396171 44.643 56 31 0 126 181 26 81 3.28e-12 62.4
Msa0139670 MtrunA17_Chr3g0137831 56.452 62 27 0 119 180 3 64 5.18e-12 64.7
Msa0139670 MtrunA17_Chr5g0396741 60.656 61 24 0 120 180 113 173 6.09e-12 66.2
Msa0139670 MtrunA17_Chr4g0002771 45.872 109 52 2 82 188 40 143 1.54e-11 63.2
Msa0139670 MtrunA17_Chr7g0225131 50.877 57 25 1 124 180 29 82 1.57e-11 60.5
Msa0139670 MtrunA17_Chr5g0398091 43.836 73 35 1 117 183 47 119 2.24e-11 63.2
Msa0139670 MtrunA17_Chr5g0424051 43.373 83 46 1 102 183 74 156 2.32e-11 64.3
Msa0139670 MtrunA17_Chr5g0398061 43.836 73 35 1 117 183 42 114 3.63e-11 62.4
Msa0139670 MtrunA17_Chr1g0198661 46.269 67 34 1 112 178 52 116 4.15e-11 63.9
Msa0139670 MtrunA17_Chr5g0398081 43.836 73 35 1 117 183 42 114 4.46e-11 62.4
Msa0139670 MtrunA17_Chr4g0057231 39.048 105 57 3 86 183 2 106 6.73e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0139670 AT3G14230.3 43.532 402 163 14 1 374 1 366 4.19e-64 209
Msa0139670 AT3G14230.2 43.035 402 166 13 1 374 1 367 4.66e-63 206
Msa0139670 AT3G14230.1 42.998 407 163 15 1 374 1 371 1.77e-62 205
Msa0139670 AT1G53910.1 43.216 398 170 16 1 382 1 358 1.77e-56 189
Msa0139670 AT1G53910.2 43.216 398 170 16 1 382 1 358 1.77e-56 189
Msa0139670 AT1G53910.3 43.860 399 164 18 1 382 1 356 3.49e-56 188
Msa0139670 AT3G16770.1 44.751 181 55 5 1 181 1 136 3.92e-37 135
Msa0139670 AT1G72360.2 41.379 203 68 6 1 203 1 152 1.51e-36 134
Msa0139670 AT1G72360.3 40.887 203 67 5 1 203 1 150 1.51e-36 134
Msa0139670 AT2G47520.1 50.000 140 58 3 77 208 7 142 1.26e-34 126
Msa0139670 AT1G72360.1 67.416 89 26 1 115 203 16 101 6.57e-34 125
Msa0139670 AT2G33710.1 63.218 87 29 2 111 197 59 142 5.67e-27 107
Msa0139670 AT2G33710.2 63.218 87 29 2 111 197 59 142 6.74e-27 107
Msa0139670 AT5G61890.1 50.476 105 49 2 112 216 78 179 1.98e-26 106
Msa0139670 AT5G13330.1 61.842 76 29 0 106 181 21 96 2.37e-26 105
Msa0139670 AT3G20310.1 45.600 125 58 2 96 220 5 119 9.52e-24 99.0
Msa0139670 AT5G07310.1 41.104 163 71 4 51 195 8 163 9.72e-24 99.4
Msa0139670 AT3G15210.1 74.138 58 15 0 123 180 24 81 1.09e-23 98.2
Msa0139670 AT5G51190.1 68.750 64 19 1 121 183 69 132 2.03e-23 97.4
Msa0139670 AT5G44210.1 67.742 62 20 0 119 180 28 89 3.05e-23 96.7
Msa0139670 AT4G17490.1 71.875 64 17 1 121 183 134 197 3.99e-23 98.2
Msa0139670 AT1G03800.1 64.789 71 24 1 111 180 39 109 5.21e-23 97.1
Msa0139670 AT1G28360.1 68.852 61 19 0 120 180 8 68 7.16e-23 95.1
Msa0139670 AT5G47230.1 60.000 80 31 1 105 183 137 216 8.83e-23 97.8
Msa0139670 AT5G43410.1 64.706 68 23 1 122 188 13 80 6.42e-22 90.9
Msa0139670 AT5G50080.2 58.065 93 38 1 93 185 56 147 7.13e-22 93.6
Msa0139670 AT5G50080.1 58.065 93 38 1 93 185 47 138 7.20e-22 93.2
Msa0139670 AT1G28370.2 70.690 58 17 0 123 180 57 114 7.26e-22 92.8
Msa0139670 AT1G50640.1 56.977 86 30 2 96 180 5 84 7.32e-22 93.6
Msa0139670 AT5G07580.1 51.064 94 40 2 107 194 93 186 8.01e-22 92.8
Msa0139670 AT2G44840.1 57.333 75 31 1 108 181 76 150 8.43e-22 93.2
Msa0139670 AT4G11140.1 68.966 58 18 0 123 180 86 143 8.62e-22 94.7
Msa0139670 AT1G28370.1 70.690 58 17 0 123 180 19 76 1.19e-21 91.3
Msa0139670 AT4G23750.2 48.980 98 41 2 83 179 88 177 2.10e-21 94.7
Msa0139670 AT4G23750.1 48.980 98 41 2 83 179 88 177 2.10e-21 94.7
Msa0139670 AT5G61600.1 62.121 66 24 1 123 187 87 152 2.72e-21 92.4
Msa0139670 AT1G22190.1 52.941 85 23 1 97 181 73 140 2.81e-21 92.8
Msa0139670 AT2G22200.1 56.410 78 31 1 106 180 50 127 3.13e-21 92.4
Msa0139670 AT5G47220.1 67.742 62 19 1 120 180 113 174 3.46e-21 92.0
Msa0139670 AT1G43160.1 48.062 129 56 4 109 237 46 163 3.58e-21 90.5
Msa0139670 AT2G20880.1 68.966 58 18 0 124 181 187 244 3.69e-21 93.6
Msa0139670 AT2G46310.1 54.545 77 35 0 123 199 98 174 5.00e-21 92.8
Msa0139670 AT4G28140.1 66.102 59 20 0 124 182 143 201 5.78e-21 92.4
Msa0139670 AT5G65130.2 52.439 82 34 1 100 181 94 170 6.42e-21 92.0
Msa0139670 AT5G65130.1 52.439 82 34 1 100 181 92 168 6.85e-21 92.0
Msa0139670 AT4G39780.1 48.889 90 37 2 92 181 70 150 7.30e-21 91.7
Msa0139670 AT4G18450.1 59.036 83 30 3 105 185 93 173 7.85e-21 92.4
Msa0139670 AT4G27950.1 61.765 68 23 1 121 185 115 182 8.73e-21 92.8
Msa0139670 AT4G17500.1 71.186 59 16 1 123 180 147 205 1.59e-20 90.9
Msa0139670 AT4G13620.1 44.898 98 51 1 84 181 195 289 1.71e-20 92.4
Msa0139670 AT1G24590.1 54.545 88 36 2 123 206 57 144 1.83e-20 91.3
Msa0139670 AT1G75490.1 52.000 75 34 1 124 198 42 114 2.55e-20 88.6
Msa0139670 AT3G23240.1 54.878 82 36 1 116 196 74 155 3.67e-20 88.6
Msa0139670 AT3G23230.1 64.062 64 22 1 120 182 16 79 5.26e-20 85.9
Msa0139670 AT5G25190.1 46.667 90 45 1 121 207 5 94 6.07e-20 87.0
Msa0139670 AT1G36060.1 61.538 65 25 0 116 180 135 199 6.31e-20 89.7
Msa0139670 AT4G32800.1 51.190 84 33 2 115 190 7 90 6.95e-20 87.8
Msa0139670 AT1G12890.1 55.556 72 32 0 108 179 5 76 9.54e-20 87.4
Msa0139670 AT1G78080.1 62.903 62 23 0 119 180 147 208 1.02e-19 89.7
Msa0139670 AT5G11590.1 52.273 88 33 2 112 190 35 122 1.04e-19 87.8
Msa0139670 AT3G61630.1 44.860 107 54 2 120 223 101 205 1.29e-19 89.0
Msa0139670 AT1G12980.1 52.941 85 33 2 101 179 29 112 1.56e-19 89.0
Msa0139670 AT5G64750.1 44.340 106 47 1 131 224 192 297 1.77e-19 89.7
Msa0139670 AT5G53290.1 66.667 57 19 0 123 179 124 180 1.91e-19 89.0
Msa0139670 AT1G01250.1 52.857 70 33 0 113 182 34 103 2.10e-19 85.9
Msa0139670 AT2G25820.1 56.944 72 26 1 124 190 26 97 2.26e-19 86.7
Msa0139670 AT4G36900.1 56.061 66 29 0 116 181 22 87 2.53e-19 85.5
Msa0139670 AT3G16280.1 61.667 60 23 0 124 183 61 120 2.80e-19 86.7
Msa0139670 AT3G50260.1 52.055 73 35 0 117 189 14 86 3.12e-19 84.3
Msa0139670 AT2G35700.1 60.000 60 24 0 124 183 45 104 4.31e-19 85.1
Msa0139670 AT3G16280.2 61.667 60 23 0 124 183 79 138 4.40e-19 86.3
Msa0139670 AT3G57600.1 47.619 84 39 1 123 201 27 110 5.22e-19 86.7
Msa0139670 AT5G13910.1 57.353 68 25 1 116 179 8 75 5.27e-19 85.1
Msa0139670 AT5G67190.1 56.716 67 29 0 118 184 15 81 9.05e-19 84.0
Msa0139670 AT4G16750.1 47.619 84 41 1 103 183 16 99 9.29e-19 83.6
Msa0139670 AT2G31230.1 58.571 70 28 1 124 192 86 155 9.29e-19 85.1
Msa0139670 AT1G15360.1 62.069 58 22 0 123 180 6 63 1.33e-18 83.6
Msa0139670 AT1G15360.2 62.069 58 22 0 123 180 6 63 1.33e-18 83.6
Msa0139670 AT5G18560.1 37.195 164 69 7 114 253 45 198 1.59e-18 86.3
Msa0139670 AT5G18450.1 60.714 56 22 0 124 179 34 89 1.62e-18 85.9
Msa0139670 AT1G74930.1 43.011 93 49 1 110 198 3 95 1.68e-18 83.2
Msa0139670 AT2G40340.2 56.923 65 28 0 124 188 14 78 1.87e-18 85.1
Msa0139670 AT2G40340.5 56.923 65 28 0 124 188 14 78 1.87e-18 85.1
Msa0139670 AT2G40340.4 56.923 65 28 0 124 188 14 78 1.87e-18 85.1
Msa0139670 AT1G19210.1 50.000 70 35 0 121 190 9 78 1.87e-18 82.8
Msa0139670 AT5G19790.1 48.193 83 43 0 110 192 8 90 2.01e-18 84.3
Msa0139670 AT2G44940.1 53.425 73 28 1 117 183 87 159 2.24e-18 85.1
Msa0139670 AT4G06746.1 57.377 61 26 0 123 183 35 95 2.67e-18 81.6
Msa0139670 AT4G31060.1 50.000 80 37 1 103 182 9 85 3.18e-18 82.4
Msa0139670 AT3G60490.1 50.649 77 33 1 119 190 66 142 3.55e-18 84.0
Msa0139670 AT3G11020.1 60.345 58 23 0 124 181 78 135 7.25e-18 84.3
Msa0139670 AT2G40340.6 56.923 65 28 0 124 188 79 143 9.66e-18 84.0
Msa0139670 AT2G40340.3 60.345 58 23 0 124 181 72 129 9.70e-18 83.2
Msa0139670 AT1G28160.1 63.158 57 21 0 123 179 38 94 1.08e-17 82.0
Msa0139670 AT2G40340.1 60.345 58 23 0 124 181 72 129 1.13e-17 83.6
Msa0139670 AT1G71450.1 56.667 60 26 0 124 183 24 83 1.23e-17 80.5
Msa0139670 AT5G05410.1 61.404 57 22 0 124 180 79 135 1.25e-17 83.6
Msa0139670 AT5G05410.2 61.404 57 22 0 124 180 79 135 1.31e-17 83.2
Msa0139670 AT5G25390.2 60.345 58 23 0 123 180 6 63 1.75e-17 80.5
Msa0139670 AT5G25810.1 58.333 60 25 0 124 183 36 95 1.83e-17 80.9
Msa0139670 AT4G25470.1 51.429 70 34 0 114 183 41 110 4.56e-17 79.7
Msa0139670 AT1G21910.1 34.247 146 81 5 124 262 50 187 4.62e-17 80.1
Msa0139670 AT4G25490.1 51.429 70 34 0 114 183 38 107 5.24e-17 79.7
Msa0139670 AT2G23340.1 58.621 58 24 0 124 181 28 85 7.06e-17 78.2
Msa0139670 AT5G21960.1 44.872 78 43 0 123 200 6 83 1.07e-16 78.6
Msa0139670 AT4G25480.1 50.000 70 35 0 114 183 41 110 1.24e-16 78.6
Msa0139670 AT1G04370.1 63.235 68 24 1 121 187 17 84 1.28e-16 76.3
Msa0139670 AT4G34410.1 58.974 78 32 0 103 180 115 192 1.29e-16 79.7
Msa0139670 AT1G46768.3 54.098 61 28 0 121 181 28 88 2.11e-16 75.9
Msa0139670 AT1G46768.1 54.098 61 28 0 121 181 28 88 2.28e-16 76.3
Msa0139670 AT1G46768.2 54.098 61 28 0 121 181 28 88 2.28e-16 76.3
Msa0139670 AT2G40350.2 54.386 57 26 0 124 180 74 130 3.80e-16 75.9
Msa0139670 AT3G23220.1 68.852 61 18 1 123 182 13 73 3.85e-16 75.1
Msa0139670 AT5G25390.1 58.621 58 21 1 123 180 6 60 4.14e-16 76.3
Msa0139670 AT2G40350.1 54.386 57 26 0 124 180 67 123 4.53e-16 75.5
Msa0139670 AT5G51990.1 43.158 95 51 1 92 183 19 113 1.15e-15 75.9
Msa0139670 AT1G71130.1 56.061 66 24 1 119 179 74 139 1.41e-15 74.3
Msa0139670 AT1G77200.1 56.250 80 29 2 117 190 35 114 2.19e-15 75.5
Msa0139670 AT2G36450.1 54.839 62 27 1 120 180 11 72 2.98e-15 73.9
Msa0139670 AT1G22985.1 62.903 62 20 2 121 179 72 133 3.07e-15 73.2
Msa0139670 AT1G53170.1 56.410 78 34 0 102 179 9 86 3.13e-15 73.9
Msa0139670 AT1G06160.1 57.143 70 29 1 124 192 82 151 7.06e-15 73.9
Msa0139670 AT1G68550.1 59.649 57 23 0 110 166 99 155 8.86e-15 75.1
Msa0139670 AT1G68550.2 59.649 57 23 0 110 166 99 155 8.86e-15 75.1
Msa0139670 AT5G61590.1 51.136 88 36 3 114 194 96 183 8.97e-15 72.8
Msa0139670 AT5G67000.1 51.667 60 29 0 119 178 116 175 1.69e-13 68.9
Msa0139670 AT1G25560.1 39.362 94 55 1 90 183 38 129 3.88e-13 70.5
Msa0139670 AT1G64380.1 61.290 62 24 0 119 180 131 192 5.04e-13 70.1
Msa0139670 AT2G40220.1 54.795 73 24 1 116 179 38 110 6.44e-13 69.7
Msa0139670 AT1G63030.2 45.333 75 38 1 117 188 23 97 7.13e-13 67.0
Msa0139670 AT1G63030.1 45.333 75 38 1 117 188 23 97 7.13e-13 67.0
Msa0139670 AT1G68840.2 43.023 86 47 1 94 179 35 118 1.13e-12 68.9
Msa0139670 AT1G68840.1 43.023 86 47 1 94 179 35 118 1.13e-12 68.9
Msa0139670 AT1G12610.1 45.333 75 38 1 117 188 23 97 1.16e-12 67.0
Msa0139670 AT5G11190.1 60.345 58 23 0 123 180 6 63 2.21e-12 65.9
Msa0139670 AT1G33760.1 60.345 58 23 0 124 181 20 77 2.75e-12 65.5
Msa0139670 AT1G49120.1 33.083 133 83 2 118 244 81 213 4.74e-12 67.0
Msa0139670 AT1G12630.1 48.000 75 38 1 106 180 1 74 5.97e-12 64.7
Msa0139670 AT3G25890.1 46.835 79 31 2 85 163 103 170 9.44e-12 66.2
Msa0139670 AT3G25890.2 46.835 79 31 2 85 163 103 170 9.44e-12 66.2
Msa0139670 AT1G71520.1 50.000 52 26 0 114 165 4 55 1.09e-11 62.8
Msa0139670 AT1G13260.1 43.421 76 41 1 104 179 42 115 1.99e-11 65.1
Msa0139670 AT1G22810.1 50.000 52 26 0 114 165 4 55 2.54e-11 61.6
Msa0139670 AT3G25730.1 45.588 68 35 1 112 179 50 115 2.84e-11 64.7
Msa0139670 AT1G77640.1 50.000 70 34 1 111 180 31 99 6.10e-11 62.8

Find 120 sgRNAs with CRISPR-Local

Find 220 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTTATAAGGTTTATGTTTA+TGG 0.152626 1_3:+73491065 Msa0139670:three_prime_UTR
AGAAGATTTGCTGTTCTTAT+TGG 0.184219 1_3:-73488509 None:intergenic
AGAACCTATAAATAATTTAT+TGG 0.187850 1_3:-73490986 None:intergenic
GGCTGGGTTCAGAGAGTTTA+AGG 0.201061 1_3:+73488405 Msa0139670:CDS
TAAATTATTTATAGGTTCTT+AGG 0.208720 1_3:+73490990 Msa0139670:three_prime_UTR
GTCAACGTCCATGGGGAAAA+TGG 0.214828 1_3:+73490001 Msa0139670:CDS
GTTCAATTTCGGCGAAAATA+TGG 0.221203 1_3:+73490260 Msa0139670:CDS
GTGGCCAATAAATTATTTAT+AGG 0.248010 1_3:+73490982 Msa0139670:three_prime_UTR
GAAGCAACTGGAGCCTCTTC+AGG 0.260903 1_3:-73490156 None:intergenic
CATTCCAGCTGCGGCGGCTG+TGG 0.276713 1_3:+73488288 Msa0139670:CDS
AGTAGAACTATGTTAATGTT+AGG 0.291340 1_3:-73487956 None:intergenic
TGTTAAGTTTGATGTTTATA+AGG 0.292901 1_3:+73491052 Msa0139670:three_prime_UTR
AAAGAGGAAGAATCAGTATA+GGG 0.297510 1_3:+73489972 Msa0139670:CDS
CTTGACGATGATTTCGAGGC+TGG 0.327055 1_3:+73488388 Msa0139670:CDS
TTGATTATTCTGATCTATGC+TGG 0.333369 1_3:+73490433 Msa0139670:CDS
CTTGGTTTCCTCCTCAAATT+CGG 0.333747 1_3:-73488346 None:intergenic
TTTCGCCGAAATTGAACATT+TGG 0.336677 1_3:-73490254 None:intergenic
TTGAAATGGGGTGGGTGATT+AGG 0.347684 1_3:-73488051 None:intergenic
GAAAGAGGAAGAATCAGTAT+AGG 0.375205 1_3:+73489971 Msa0139670:CDS
GGAAACCAAATGTTCAATTT+CGG 0.381029 1_3:+73490249 Msa0139670:CDS
TGTAGCTTTATTTACATAAC+CGG 0.382932 1_3:-73490782 None:intergenic
TCATTCAACAGCTGCGTCTC+AGG 0.382989 1_3:-73490201 None:intergenic
CCACCCACAGCCGCCGCAGC+TGG 0.383237 1_3:-73488292 None:intergenic
GCTTCATTGGCTGCTTTGCT+TGG 0.389028 1_3:+73490660 Msa0139670:CDS
GCTGACATCGGAGCCTTCTC+TGG 0.391197 1_3:+73490342 Msa0139670:CDS
ATCTATACTCATATGATTCA+AGG 0.395518 1_3:-73491228 None:intergenic
CAGACACGGACTCCTTTCCT+TGG 0.399573 1_3:-73490042 None:intergenic
GGATGATATAATTGTAAACT+TGG 0.400289 1_3:+73491086 Msa0139670:three_prime_UTR
AGTTCTTCGAGAACGATAAC+TGG 0.404947 1_3:+73490631 Msa0139670:CDS
TTGTTTGAATTCAAAGCAAC+AGG 0.406846 1_3:-73489925 None:intergenic
GGTGTCAAAGGTTTCACCTT+TGG 0.410353 1_3:+73488484 Msa0139670:CDS
CAAGGAAAGGAGTCCGTGTC+TGG 0.420025 1_3:+73490043 Msa0139670:CDS
GTAGAACTATGTTAATGTTA+GGG 0.423856 1_3:-73487955 None:intergenic
TTTGCTTGACGATGATTTCG+AGG 0.426414 1_3:+73488384 Msa0139670:CDS
ATATCCTCTGGCCGAATTTG+AGG 0.426856 1_3:+73488335 Msa0139670:CDS
TCATTGGCTGCTTTGCTTGG+TGG 0.427521 1_3:+73490663 Msa0139670:CDS
TTCAAACAAGCTAGCTGAAA+AGG 0.429742 1_3:+73489939 Msa0139670:CDS
TGATTATTCTGATCTATGCT+GGG 0.431246 1_3:+73490434 Msa0139670:CDS
ATTCCAGCTGCGGCGGCTGT+GGG 0.434571 1_3:+73488289 Msa0139670:CDS
TTGAACATTTGGTTTCCGTT+TGG 0.434812 1_3:-73490243 None:intergenic
CAAACTTAACAATCCTCAAA+AGG 0.448960 1_3:-73491040 None:intergenic
TCTTCTAAGTCCTTTGTTCG+TGG 0.451762 1_3:+73488526 Msa0139670:CDS
CGTTCTCGAAGAACTTCAGC+TGG 0.457607 1_3:-73490623 None:intergenic
GTCTGAGATTCGCCTTCCTT+AGG 0.463157 1_3:-73490510 None:intergenic
CCAGCTGCGGCGGCTGTGGG+TGG 0.466784 1_3:+73488292 Msa0139670:CDS
TCAACGTCCATGGGGAAAAT+GGG 0.468227 1_3:+73490002 Msa0139670:CDS
TAACTGGAGTGATGCTTCAT+TGG 0.468743 1_3:+73490647 Msa0139670:CDS
TGAGGAGGAAACCAAGTTCA+AGG 0.469181 1_3:+73488353 Msa0139670:CDS
ATCGGAGCCTTCTCTGGAAA+CGG 0.475413 1_3:+73490348 Msa0139670:CDS
TTCTGTTCCACTTGATCCAT+AGG 0.479980 1_3:-73490297 None:intergenic
AGGCTCCGATGTCAGCATAC+TGG 0.483220 1_3:-73490335 None:intergenic
GGGGTATCCGTCAACGTCCA+TGG 0.487909 1_3:+73489992 Msa0139670:CDS
GGGTTGTTGGTCGGTGTCAA+AGG 0.488518 1_3:+73488472 Msa0139670:CDS
AAGCAACTGGAGCCTCTTCA+GGG 0.489740 1_3:-73490155 None:intergenic
AGACACGGACTCCTTTCCTT+GGG 0.494250 1_3:-73490041 None:intergenic
CATCGCCTGCGATGGAAGGC+AGG 0.497804 1_3:-73490737 None:intergenic
GATGACCTGCCTTCCATCGC+AGG 0.498150 1_3:+73490732 Msa0139670:CDS
CTCTTCAGGGAAATTCACCT+TGG 0.502615 1_3:-73490142 None:intergenic
GTGGAAACACAATGAACCTC+TGG 0.506231 1_3:+73490703 Msa0139670:CDS
GGGTGGCTCCCGCCGTGTCA+CGG 0.506818 1_3:+73488309 Msa0139670:CDS
GGGTATCCGTCAACGTCCAT+GGG 0.507005 1_3:+73489993 Msa0139670:CDS
TTGCACTCCGTTTCCAGAGA+AGG 0.508175 1_3:-73490355 None:intergenic
GTGTCACGGCGGATATCCTC+TGG 0.516593 1_3:+73488323 Msa0139670:CDS
GCTGTTCTTATTGGAACCAA+AGG 0.518299 1_3:-73488500 None:intergenic
CTGAACTCTTTAAAGCCAAA+CGG 0.526123 1_3:+73490228 Msa0139670:CDS
GCATACTGGTTGTTAACCAA+TGG 0.527752 1_3:-73490321 None:intergenic
GAGGATGAAGATGATGATGA+AGG 0.531248 1_3:+73488451 Msa0139670:CDS
CTCCACGCTTTACTTAAAGC+TGG 0.531385 1_3:-73490947 None:intergenic
AAAAGGATTCGAAGAGAAAG+AGG 0.532558 1_3:+73489956 Msa0139670:CDS
GATATCCGCCGTGACACGGC+GGG 0.541477 1_3:-73488317 None:intergenic
AGATGATGATGAAGGGTTGT+TGG 0.541828 1_3:+73488459 Msa0139670:CDS
TCTGCTGCTGCTCCTAAGGA+AGG 0.547838 1_3:+73490498 Msa0139670:CDS
GATCTATGCTGGGGCGAACA+AGG 0.548369 1_3:+73490444 Msa0139670:CDS
AAAGGAGTCCGTGTCTGGCT+CGG 0.551084 1_3:+73490048 Msa0139670:CDS
GGACTCCTTTCCTTGGGTCA+CGG 0.553627 1_3:-73490035 None:intergenic
TTAGAAAACATCGCCTGCGA+TGG 0.555178 1_3:-73490745 None:intergenic
GAGCTTATGATGCTGAAGCT+AGG 0.555996 1_3:+73490100 Msa0139670:CDS
AATCATCCCCACCAAACAAA+GGG 0.556471 1_3:-73491153 None:intergenic
AAAACATCGCCTGCGATGGA+AGG 0.558682 1_3:-73490741 None:intergenic
CAAGGTGAATTTCCCTGAAG+AGG 0.561624 1_3:+73490143 Msa0139670:CDS
AAGAGGAAGAATCAGTATAG+GGG 0.562075 1_3:+73489973 Msa0139670:CDS
TTGACGATGATTTCGAGGCT+GGG 0.562795 1_3:+73488389 Msa0139670:CDS
TCTAAACAACGTCACCTGGC+CGG 0.563199 1_3:+73490763 Msa0139670:exon
TCACCTTGGCTTTCTTGCCA+CGG 0.566255 1_3:-73490128 None:intergenic
TCCTCCTCAAATTCGGCCAG+AGG 0.570122 1_3:-73488339 None:intergenic
CTTTATTTACATAACCGGCC+AGG 0.572709 1_3:-73490777 None:intergenic
GAAAACACAGACGAAATCTC+AGG 0.572948 1_3:-73490477 None:intergenic
AAATCATCCCCACCAAACAA+AGG 0.580123 1_3:-73491154 None:intergenic
CAGAAGATTGAATTGAACAA+TGG 0.580470 1_3:-73488171 None:intergenic
CGCCGCAGCTGGAATGAAGT+CGG 0.582176 1_3:-73488281 None:intergenic
ATCTGCAAGCTCCTCAGAGA+GGG 0.588015 1_3:-73490592 None:intergenic
TCAAGTGGAACAGAAACCAT+TGG 0.589632 1_3:+73490305 Msa0139670:CDS
GCTTGGTGGAGACACAACTC+AGG 0.591323 1_3:+73490677 Msa0139670:CDS
TGTGAAATTTGTATTTGACT+TGG 0.599669 1_3:-73487985 None:intergenic
CGACTTCATTCCAGCTGCGG+CGG 0.599838 1_3:+73488282 Msa0139670:CDS
TACCAGCTTTAAGTAAAGCG+TGG 0.606847 1_3:+73490945 Msa0139670:three_prime_UTR
AAAACAGTTACCACGAACAA+AGG 0.607112 1_3:-73488536 None:intergenic
GATGATGAAGGGTTGTTGGT+CGG 0.608775 1_3:+73488463 Msa0139670:CDS
AGAGGATATCCGCCGTGACA+CGG 0.610090 1_3:-73488321 None:intergenic
CAGCTGAGATCCGTGACCCA+AGG 0.616099 1_3:+73490025 Msa0139670:CDS
GAGATCCGTGACCCAAGGAA+AGG 0.617143 1_3:+73490030 Msa0139670:CDS
TTCTGATTTCGATGAAGACG+AGG 0.618845 1_3:+73488432 Msa0139670:CDS
CTCCGACTTCATTCCAGCTG+CGG 0.624661 1_3:+73488279 Msa0139670:CDS
TGAAAGTTCCGAGCCAGACA+CGG 0.629911 1_3:-73490056 None:intergenic
TATGCTGTCTGACAACACTC+AGG 0.633633 1_3:+73490536 Msa0139670:CDS
GATTATTCTGATCTATGCTG+GGG 0.633722 1_3:+73490435 Msa0139670:CDS
TCCTCTGGCCGAATTTGAGG+AGG 0.636159 1_3:+73488338 Msa0139670:CDS
GTTCTCGAAGAACTTCAGCT+GGG 0.644927 1_3:-73490622 None:intergenic
GGTGGAGACACAACTCAGGA+TGG 0.645410 1_3:+73490681 Msa0139670:CDS
GGAGACACAACTCAGGATGG+TGG 0.648547 1_3:+73490684 Msa0139670:CDS
AGGATGAAGATGATGATGAA+GGG 0.650127 1_3:+73488452 Msa0139670:CDS
AACAACCAGTATGCTGACAT+CGG 0.657054 1_3:+73490330 Msa0139670:CDS
GCAGGTCATCGAAGTTCCAG+AGG 0.663102 1_3:-73490719 None:intergenic
GCTGAAGCTAGGAGAATCCG+TGG 0.669094 1_3:+73490111 Msa0139670:CDS
AATCCGTGGCAAGAAAGCCA+AGG 0.680019 1_3:+73490125 Msa0139670:CDS
TTCTGCAAAGACCCTCTCTG+AGG 0.687108 1_3:+73490581 Msa0139670:CDS
TATCTGCAAGCTCCTCAGAG+AGG 0.701208 1_3:-73490593 None:intergenic
GGTATCCGTCAACGTCCATG+GGG 0.721547 1_3:+73489994 Msa0139670:CDS
TGGCTCCCGCCGTGTCACGG+CGG 0.745152 1_3:+73488312 Msa0139670:CDS
GGATATCCGCCGTGACACGG+CGG 0.757664 1_3:-73488318 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATGTGATTTAATTTTAT+AGG + chr1_3:73488765-73488784 Msa0139670:intron 10.0%
!!! TTATGTGATTTAATTTTATA+GGG + chr1_3:73488766-73488785 Msa0139670:intron 10.0%
!! ATTACATTAAAAAAATACAA+AGG - chr1_3:73488914-73488933 None:intergenic 10.0%
!!! TTTTTTTAATGTAATTTTTG+TGG + chr1_3:73488919-73488938 Msa0139670:intron 10.0%
!! TAAATTATCATAAATAAAGT+TGG + chr1_3:73489086-73489105 Msa0139670:intron 10.0%
!! TAATCCATATAAAATTAAAA+CGG + chr1_3:73489821-73489840 Msa0139670:intron 10.0%
!! CTAAAAACATAATAAAATGT+GGG - chr1_3:73488638-73488657 None:intergenic 15.0%
!! ACTAAAAACATAATAAAATG+TGG - chr1_3:73488639-73488658 None:intergenic 15.0%
!!! TTTATTATGTTTTTAGTTGA+TGG + chr1_3:73488642-73488661 Msa0139670:intron 15.0%
!!! ATTTAATTTTGCCAAATTTA+AGG + chr1_3:73488690-73488709 Msa0139670:intron 15.0%
!!! TTTTAATTACCAATCTAAAT+TGG - chr1_3:73488980-73488999 None:intergenic 15.0%
!! TAAATTATCATAAATGAAGT+TGG + chr1_3:73489133-73489152 Msa0139670:intron 15.0%
!!! TCTTAACTTTTAAAAATTTG+AGG + chr1_3:73489590-73489609 Msa0139670:intron 15.0%
!!! AGTAACTTTTATTTTACATT+CGG + chr1_3:73490809-73490828 Msa0139670:intron 15.0%
!! AGAACCTATAAATAATTTAT+TGG - chr1_3:73490989-73491008 None:intergenic 15.0%
!! TAAATTATTTATAGGTTCTT+AGG + chr1_3:73490990-73491009 Msa0139670:three_prime_UTR 15.0%
!!! TTTTCTTTTTGCATTGAAAT+GGG - chr1_3:73488067-73488086 None:intergenic 20.0%
!!! TTCTGCAATTTTTTTTCAAT+TGG + chr1_3:73488189-73488208 Msa0139670:five_prime_UTR 20.0%
!!! TCTGCAATTTTTTTTCAATT+GGG + chr1_3:73488190-73488209 Msa0139670:five_prime_UTR 20.0%
!!! TTTTTATCTCTCTTGAAAAA+AGG - chr1_3:73488237-73488256 None:intergenic 20.0%
!!! TAGTATGATTTATGATTTTG+TGG + chr1_3:73488729-73488748 Msa0139670:intron 20.0%
!!! AGTATGATTTATGATTTTGT+GGG + chr1_3:73488730-73488749 Msa0139670:intron 20.0%
!!! TGAACATGAAATTTTATTGA+TGG + chr1_3:73488796-73488815 Msa0139670:intron 20.0%
!!! TTAATGTAATTTTTGTGGAT+TGG + chr1_3:73488924-73488943 Msa0139670:intron 20.0%
!! TAATTACAACCAATCTAAAT+TGG - chr1_3:73489012-73489031 None:intergenic 20.0%
!!! TTTAGATTGGTTGTAATTAT+TGG + chr1_3:73489013-73489032 Msa0139670:intron 20.0%
!! AGACAATAAAAGTTCAATTA+TGG - chr1_3:73489617-73489636 None:intergenic 20.0%
!! TAAACAAATTGTTCATAAGT+CGG + chr1_3:73489650-73489669 Msa0139670:intron 20.0%
!!! TCAACCGTTTTAATTTTATA+TGG - chr1_3:73489828-73489847 None:intergenic 20.0%
!!! TTTTATTTTACATTCGGTTT+TGG + chr1_3:73490815-73490834 Msa0139670:intron 20.0%
!!! TCGTTAATTTTGTTTCTTTA+AGG + chr1_3:73490840-73490859 Msa0139670:intron 20.0%
!!! TTAATTTTGTTTCTTTAAGG+TGG + chr1_3:73490843-73490862 Msa0139670:intron 20.0%
!!! TGGTTTTTTTATATTGTTGA+TGG + chr1_3:73490906-73490925 Msa0139670:three_prime_UTR 20.0%
!! TGTTAAGTTTGATGTTTATA+AGG + chr1_3:73491052-73491071 Msa0139670:three_prime_UTR 20.0%
!! GTTTATAAGGTTTATGTTTA+TGG + chr1_3:73491065-73491084 Msa0139670:three_prime_UTR 20.0%
! GTAGAACTATGTTAATGTTA+GGG - chr1_3:73487958-73487977 None:intergenic 25.0%
! AGTAGAACTATGTTAATGTT+AGG - chr1_3:73487959-73487978 None:intergenic 25.0%
! TGTGAAATTTGTATTTGACT+TGG - chr1_3:73487988-73488007 None:intergenic 25.0%
!! TTATTTTCATCAAACAACCA+AGG + chr1_3:73488011-73488030 Msa0139670:five_prime_UTR 25.0%
!! TTTCTTTTTGCATTGAAATG+GGG - chr1_3:73488066-73488085 None:intergenic 25.0%
!! CTTTTCTTTTTGCATTGAAA+TGG - chr1_3:73488068-73488087 None:intergenic 25.0%
!!! GAAATGGTTTTTTTTGTGTT+TGG - chr1_3:73488132-73488151 None:intergenic 25.0%
!!! ATTTTGTTTGGAAATGGAAA+TGG - chr1_3:73488148-73488167 None:intergenic 25.0%
!!! ACATGCATTTGTTATTTTGA+TGG + chr1_3:73488612-73488631 Msa0139670:intron 25.0%
! TCTCAATAGTTCCTTAAATT+TGG - chr1_3:73488704-73488723 None:intergenic 25.0%
!!! TGCTTTGTGATTTATTTTTC+TGG + chr1_3:73488867-73488886 Msa0139670:intron 25.0%
!! TTTTCAGATCCAATTTAGAT+TGG + chr1_3:73488968-73488987 Msa0139670:intron 25.0%
! GAAAAAGATCCAATTTAGAT+TGG + chr1_3:73489000-73489019 Msa0139670:intron 25.0%
! TTTATAGATCCAATTGAAGT+TGG + chr1_3:73489042-73489061 Msa0139670:intron 25.0%
!! TTGTAACCTTCAATTTTTCT+TGG + chr1_3:73489244-73489263 Msa0139670:intron 25.0%
!! TGTAACCTTCAATTTTTCTT+GGG + chr1_3:73489245-73489264 Msa0139670:intron 25.0%
! AAAAACCCAAGAAAAATTGA+AGG - chr1_3:73489253-73489272 None:intergenic 25.0%
!! TTCAATTTTTCTTGGGTTTT+TGG + chr1_3:73489252-73489271 Msa0139670:intron 25.0%
! AAAAAACATGTTTGTTCCTT+TGG + chr1_3:73489336-73489355 Msa0139670:intron 25.0%
! TGTTGTATATTTGCATGAAT+TGG + chr1_3:73489500-73489519 Msa0139670:intron 25.0%
! GTTTGATTAACCTATCATTA+TGG + chr1_3:73489535-73489554 Msa0139670:intron 25.0%
! TGGATTATTAATGAGCAATT+TGG - chr1_3:73489808-73489827 None:intergenic 25.0%
!!! TGTAGCTTTATTTACATAAC+CGG - chr1_3:73490785-73490804 None:intergenic 25.0%
! GTGGCCAATAAATTATTTAT+AGG + chr1_3:73490982-73491001 Msa0139670:three_prime_UTR 25.0%
! GGATGATATAATTGTAAACT+TGG + chr1_3:73491086-73491105 Msa0139670:three_prime_UTR 25.0%
!! ACATGAATGATTTTGCTTTA+TGG + chr1_3:73491185-73491204 Msa0139670:three_prime_UTR 25.0%
! ATCTATACTCATATGATTCA+AGG - chr1_3:73491231-73491250 None:intergenic 25.0%
!! TGATTTTACGGTTTTATCCT+TGG - chr1_3:73488031-73488050 None:intergenic 30.0%
!! TGGTTGATTTTGTTTGGAAA+TGG - chr1_3:73488154-73488173 None:intergenic 30.0%
!! GAACAATGGTTGATTTTGTT+TGG - chr1_3:73488160-73488179 None:intergenic 30.0%
CAGAAGATTGAATTGAACAA+TGG - chr1_3:73488174-73488193 None:intergenic 30.0%
AGAGAGATAAAAAAGATGTG+TGG + chr1_3:73488244-73488263 Msa0139670:exon 30.0%
AAAAAAGGTTTCCTTGAACT+TGG - chr1_3:73488367-73488386 None:intergenic 30.0%
AAATCATCGTCAAGCAAAAA+AGG - chr1_3:73488382-73488401 None:intergenic 30.0%
!! AGAAGATTTGCTGTTCTTAT+TGG - chr1_3:73488512-73488531 None:intergenic 30.0%
! ATGATTTATGATTTTGTGGG+TGG + chr1_3:73488733-73488752 Msa0139670:intron 30.0%
CAACTTAAACCAACTTCAAT+TGG - chr1_3:73489054-73489073 None:intergenic 30.0%
TTTATCAACCAGCAAAATAG+AGG - chr1_3:73489319-73489338 None:intergenic 30.0%
AATGAATTACTGAACACATG+TGG - chr1_3:73489410-73489429 None:intergenic 30.0%
AAATTAGTTCAAAAATCGCG+TGG - chr1_3:73489434-73489453 None:intergenic 30.0%
CATTAGATCACCATAATGAT+AGG - chr1_3:73489548-73489567 None:intergenic 30.0%
CTATCATTATGGTGATCTAA+TGG + chr1_3:73489546-73489565 Msa0139670:intron 30.0%
! CAAACATGCATGTAATGTTT+TGG + chr1_3:73489736-73489755 Msa0139670:intron 30.0%
TTGTTTGAATTCAAAGCAAC+AGG - chr1_3:73489928-73489947 None:intergenic 30.0%
AAAGAGGAAGAATCAGTATA+GGG + chr1_3:73489972-73489991 Msa0139670:CDS 30.0%
GGAAACCAAATGTTCAATTT+CGG + chr1_3:73490249-73490268 Msa0139670:CDS 30.0%
TTGATTATTCTGATCTATGC+TGG + chr1_3:73490433-73490452 Msa0139670:CDS 30.0%
TGATTATTCTGATCTATGCT+GGG + chr1_3:73490434-73490453 Msa0139670:CDS 30.0%
! TTTGCAGAATCATTTTGCAT+AGG - chr1_3:73490570-73490589 None:intergenic 30.0%
CCTGAAAATAGTTCATAGTA+TGG - chr1_3:73490881-73490900 None:intergenic 30.0%
! CCATACTATGAACTATTTTC+AGG + chr1_3:73490878-73490897 Msa0139670:intron 30.0%
!! TGAACTATTTTCAGGATTGT+TGG + chr1_3:73490886-73490905 Msa0139670:intron 30.0%
! AAGGTTTTTGACAAGACAAA+AGG - chr1_3:73491024-73491043 None:intergenic 30.0%
CAAACTTAACAATCCTCAAA+AGG - chr1_3:73491043-73491062 None:intergenic 30.0%
! ACAAATTTTCTCCCTTTGTT+TGG + chr1_3:73491142-73491161 Msa0139670:three_prime_UTR 30.0%
! AATGATTTTGCTTTATGGTG+TGG + chr1_3:73491190-73491209 Msa0139670:three_prime_UTR 30.0%
! TGGGTGATTAGGTGATTTTA+CGG - chr1_3:73488043-73488062 None:intergenic 35.0%
! TTTTTGCATTGAAATGGGGT+GGG - chr1_3:73488062-73488081 None:intergenic 35.0%
GAGATAAAAAAGATGTGTGG+TGG + chr1_3:73488247-73488266 Msa0139670:exon 35.0%
! AGGATGAAGATGATGATGAA+GGG + chr1_3:73488452-73488471 Msa0139670:CDS 35.0%
AAAACAGTTACCACGAACAA+AGG - chr1_3:73488539-73488558 None:intergenic 35.0%
! TGAACTTTCCTCTATTTTGC+TGG + chr1_3:73489308-73489327 Msa0139670:intron 35.0%
TAAAAATCAGCCAAAGCCAA+AGG - chr1_3:73489355-73489374 None:intergenic 35.0%
TTCATAAGTCGGTAGTGATT+TGG + chr1_3:73489661-73489680 Msa0139670:intron 35.0%
!! CTAGTCTTTTGCTTCTGTTT+TGG + chr1_3:73489705-73489724 Msa0139670:intron 35.0%
! ATTAATGAGCAATTTGGAGC+AGG - chr1_3:73489802-73489821 None:intergenic 35.0%
ACCAACTTTGAATGTGTTGT+AGG + chr1_3:73489886-73489905 Msa0139670:intron 35.0%
TCCTACAACACATTCAAAGT+TGG - chr1_3:73489890-73489909 None:intergenic 35.0%
TTCAAACAAGCTAGCTGAAA+AGG + chr1_3:73489939-73489958 Msa0139670:CDS 35.0%
AAAAGGATTCGAAGAGAAAG+AGG + chr1_3:73489956-73489975 Msa0139670:CDS 35.0%
GAAAGAGGAAGAATCAGTAT+AGG + chr1_3:73489971-73489990 Msa0139670:CDS 35.0%
AAGAGGAAGAATCAGTATAG+GGG + chr1_3:73489973-73489992 Msa0139670:CDS 35.0%
! ACTTTTCTTGAGACGTTTTG+AGG - chr1_3:73490181-73490200 None:intergenic 35.0%
!! CTGAACTCTTTAAAGCCAAA+CGG + chr1_3:73490228-73490247 Msa0139670:CDS 35.0%
! TTGAACATTTGGTTTCCGTT+TGG - chr1_3:73490246-73490265 None:intergenic 35.0%
TTTCGCCGAAATTGAACATT+TGG - chr1_3:73490257-73490276 None:intergenic 35.0%
GTTCAATTTCGGCGAAAATA+TGG + chr1_3:73490260-73490279 Msa0139670:CDS 35.0%
GATTATTCTGATCTATGCTG+GGG + chr1_3:73490435-73490454 Msa0139670:CDS 35.0%
!!! CGTGGAGTTTTATTTTCTTG+TGG + chr1_3:73490963-73490982 Msa0139670:three_prime_UTR 35.0%
! GTCTTGTCAAAAACCTTTTG+AGG + chr1_3:73491027-73491046 Msa0139670:three_prime_UTR 35.0%
!! AATTTTCTCCCTTTGTTTGG+TGG + chr1_3:73491145-73491164 Msa0139670:three_prime_UTR 35.0%
!! ATTTTCTCCCTTTGTTTGGT+GGG + chr1_3:73491146-73491165 Msa0139670:three_prime_UTR 35.0%
! CTTTTTGCATTGAAATGGGG+TGG - chr1_3:73488063-73488082 None:intergenic 40.0%
CTTGGTTTCCTCCTCAAATT+CGG - chr1_3:73488349-73488368 None:intergenic 40.0%
TTTGCTTGACGATGATTTCG+AGG + chr1_3:73488384-73488403 Msa0139670:CDS 40.0%
TTCTGATTTCGATGAAGACG+AGG + chr1_3:73488432-73488451 Msa0139670:CDS 40.0%
! GAGGATGAAGATGATGATGA+AGG + chr1_3:73488451-73488470 Msa0139670:CDS 40.0%
! AGATGATGATGAAGGGTTGT+TGG + chr1_3:73488459-73488478 Msa0139670:CDS 40.0%
GCTGTTCTTATTGGAACCAA+AGG - chr1_3:73488503-73488522 None:intergenic 40.0%
TCTTCTAAGTCCTTTGTTCG+TGG + chr1_3:73488526-73488545 Msa0139670:CDS 40.0%
! CATGTTTGTTCCTTTGGCTT+TGG + chr1_3:73489342-73489361 Msa0139670:intron 40.0%
TACTGAACACATGTGGTGAT+TGG - chr1_3:73489403-73489422 None:intergenic 40.0%
!! GGAGAACTACTTTTCTCCTA+TGG + chr1_3:73490281-73490300 Msa0139670:CDS 40.0%
! CTTTTCTCCTATGGATCAAG+TGG + chr1_3:73490290-73490309 Msa0139670:CDS 40.0%
TTCTGTTCCACTTGATCCAT+AGG - chr1_3:73490300-73490319 None:intergenic 40.0%
TCAAGTGGAACAGAAACCAT+TGG + chr1_3:73490305-73490324 Msa0139670:CDS 40.0%
! GCATACTGGTTGTTAACCAA+TGG - chr1_3:73490324-73490343 None:intergenic 40.0%
AACAACCAGTATGCTGACAT+CGG + chr1_3:73490330-73490349 Msa0139670:CDS 40.0%
! GACGAAATCTCAGGTGTTTT+TGG - chr1_3:73490471-73490490 None:intergenic 40.0%
GAAAACACAGACGAAATCTC+AGG - chr1_3:73490480-73490499 None:intergenic 40.0%
AGTTCTTCGAGAACGATAAC+TGG + chr1_3:73490631-73490650 Msa0139670:CDS 40.0%
TAACTGGAGTGATGCTTCAT+TGG + chr1_3:73490647-73490666 Msa0139670:CDS 40.0%
! GTTTTCTAAACAACGTCACC+TGG + chr1_3:73490759-73490778 Msa0139670:exon 40.0%
! CTTTATTTACATAACCGGCC+AGG - chr1_3:73490780-73490799 None:intergenic 40.0%
!! TACCAGCTTTAAGTAAAGCG+TGG + chr1_3:73490945-73490964 Msa0139670:three_prime_UTR 40.0%
!! TTTTCTCCCTTTGTTTGGTG+GGG + chr1_3:73491147-73491166 Msa0139670:three_prime_UTR 40.0%
AATCATCCCCACCAAACAAA+GGG - chr1_3:73491156-73491175 None:intergenic 40.0%
AAATCATCCCCACCAAACAA+AGG - chr1_3:73491157-73491176 None:intergenic 40.0%
TTGAAATGGGGTGGGTGATT+AGG - chr1_3:73488054-73488073 None:intergenic 45.0%
ATATCCTCTGGCCGAATTTG+AGG + chr1_3:73488335-73488354 Msa0139670:CDS 45.0%
TGAGGAGGAAACCAAGTTCA+AGG + chr1_3:73488353-73488372 Msa0139670:CDS 45.0%
TTGACGATGATTTCGAGGCT+GGG + chr1_3:73488389-73488408 Msa0139670:CDS 45.0%
GATGATGAAGGGTTGTTGGT+CGG + chr1_3:73488463-73488482 Msa0139670:CDS 45.0%
GGTGTCAAAGGTTTCACCTT+TGG + chr1_3:73488484-73488503 Msa0139670:CDS 45.0%
! ATTTTCCCCATGGACGTTGA+CGG - chr1_3:73490002-73490021 None:intergenic 45.0%
TCAACGTCCATGGGGAAAAT+GGG + chr1_3:73490002-73490021 Msa0139670:CDS 45.0%
GAGCTTATGATGCTGAAGCT+AGG + chr1_3:73490100-73490119 Msa0139670:CDS 45.0%
CTCTTCAGGGAAATTCACCT+TGG - chr1_3:73490145-73490164 None:intergenic 45.0%
CAAGGTGAATTTCCCTGAAG+AGG + chr1_3:73490143-73490162 Msa0139670:CDS 45.0%
!!! AGACGTTTTGAGGAAGCAAC+TGG - chr1_3:73490171-73490190 None:intergenic 45.0%
TATGCTGTCTGACAACACTC+AGG + chr1_3:73490536-73490555 Msa0139670:CDS 45.0%
GTTCTCGAAGAACTTCAGCT+GGG - chr1_3:73490625-73490644 None:intergenic 45.0%
GTGGAAACACAATGAACCTC+TGG + chr1_3:73490703-73490722 Msa0139670:CDS 45.0%
TTAGAAAACATCGCCTGCGA+TGG - chr1_3:73490748-73490767 None:intergenic 45.0%
CTCCACGCTTTACTTAAAGC+TGG - chr1_3:73490950-73490969 None:intergenic 45.0%
!!! TTATTAATCTTTTTTATTTT+TGG + chr1_3:73488563-73488582 Msa0139670:intron 5.0%
CTTGACGATGATTTCGAGGC+TGG + chr1_3:73488388-73488407 Msa0139670:CDS 50.0%
GGCTGGGTTCAGAGAGTTTA+AGG + chr1_3:73488405-73488424 Msa0139670:CDS 50.0%
GTCAACGTCCATGGGGAAAA+TGG + chr1_3:73490001-73490020 Msa0139670:CDS 50.0%
AGACACGGACTCCTTTCCTT+GGG - chr1_3:73490044-73490063 None:intergenic 50.0%
TGAAAGTTCCGAGCCAGACA+CGG - chr1_3:73490059-73490078 None:intergenic 50.0%
AATCCGTGGCAAGAAAGCCA+AGG + chr1_3:73490125-73490144 Msa0139670:CDS 50.0%
! TCACCTTGGCTTTCTTGCCA+CGG - chr1_3:73490131-73490150 None:intergenic 50.0%
AAGCAACTGGAGCCTCTTCA+GGG - chr1_3:73490158-73490177 None:intergenic 50.0%
TCATTCAACAGCTGCGTCTC+AGG - chr1_3:73490204-73490223 None:intergenic 50.0%
! ATCGGAGCCTTCTCTGGAAA+CGG + chr1_3:73490348-73490367 Msa0139670:CDS 50.0%
TTGCACTCCGTTTCCAGAGA+AGG - chr1_3:73490358-73490377 None:intergenic 50.0%
! GTTTTCTGCTGCTGCTCCTA+AGG + chr1_3:73490494-73490513 Msa0139670:CDS 50.0%
! GTCTGAGATTCGCCTTCCTT+AGG - chr1_3:73490513-73490532 None:intergenic 50.0%
TTCTGCAAAGACCCTCTCTG+AGG + chr1_3:73490581-73490600 Msa0139670:CDS 50.0%
ATCTGCAAGCTCCTCAGAGA+GGG - chr1_3:73490595-73490614 None:intergenic 50.0%
TATCTGCAAGCTCCTCAGAG+AGG - chr1_3:73490596-73490615 None:intergenic 50.0%
CGTTCTCGAAGAACTTCAGC+TGG - chr1_3:73490626-73490645 None:intergenic 50.0%
! GCTTCATTGGCTGCTTTGCT+TGG + chr1_3:73490660-73490679 Msa0139670:CDS 50.0%
! TCATTGGCTGCTTTGCTTGG+TGG + chr1_3:73490663-73490682 Msa0139670:CDS 50.0%
AAAACATCGCCTGCGATGGA+AGG - chr1_3:73490744-73490763 None:intergenic 50.0%
TCTAAACAACGTCACCTGGC+CGG + chr1_3:73490763-73490782 Msa0139670:exon 50.0%
CTCCGACTTCATTCCAGCTG+CGG + chr1_3:73488279-73488298 Msa0139670:CDS 55.0%
AGAGGATATCCGCCGTGACA+CGG - chr1_3:73488324-73488343 None:intergenic 55.0%
TCCTCTGGCCGAATTTGAGG+AGG + chr1_3:73488338-73488357 Msa0139670:CDS 55.0%
TCCTCCTCAAATTCGGCCAG+AGG - chr1_3:73488342-73488361 None:intergenic 55.0%
!! GGGTTGTTGGTCGGTGTCAA+AGG + chr1_3:73488472-73488491 Msa0139670:CDS 55.0%
GGGTATCCGTCAACGTCCAT+GGG + chr1_3:73489993-73490012 Msa0139670:CDS 55.0%
GGTATCCGTCAACGTCCATG+GGG + chr1_3:73489994-73490013 Msa0139670:CDS 55.0%
! TCAGCTGCCCATTTTCCCCA+TGG - chr1_3:73490012-73490031 None:intergenic 55.0%
GAGATCCGTGACCCAAGGAA+AGG + chr1_3:73490030-73490049 Msa0139670:CDS 55.0%
GGACTCCTTTCCTTGGGTCA+CGG - chr1_3:73490038-73490057 None:intergenic 55.0%
CAGACACGGACTCCTTTCCT+TGG - chr1_3:73490045-73490064 None:intergenic 55.0%
CAAGGAAAGGAGTCCGTGTC+TGG + chr1_3:73490043-73490062 Msa0139670:CDS 55.0%
AAAGGAGTCCGTGTCTGGCT+CGG + chr1_3:73490048-73490067 Msa0139670:CDS 55.0%
GCTGAAGCTAGGAGAATCCG+TGG + chr1_3:73490111-73490130 Msa0139670:CDS 55.0%
GAAGCAACTGGAGCCTCTTC+AGG - chr1_3:73490159-73490178 None:intergenic 55.0%
AGGCTCCGATGTCAGCATAC+TGG - chr1_3:73490338-73490357 None:intergenic 55.0%
GATCTATGCTGGGGCGAACA+AGG + chr1_3:73490444-73490463 Msa0139670:CDS 55.0%
TCTGCTGCTGCTCCTAAGGA+AGG + chr1_3:73490498-73490517 Msa0139670:CDS 55.0%
! GCTTGGTGGAGACACAACTC+AGG + chr1_3:73490677-73490696 Msa0139670:CDS 55.0%
GGTGGAGACACAACTCAGGA+TGG + chr1_3:73490681-73490700 Msa0139670:CDS 55.0%
GGAGACACAACTCAGGATGG+TGG + chr1_3:73490684-73490703 Msa0139670:CDS 55.0%
GCAGGTCATCGAAGTTCCAG+AGG - chr1_3:73490722-73490741 None:intergenic 55.0%
CGCCGCAGCTGGAATGAAGT+CGG - chr1_3:73488284-73488303 None:intergenic 60.0%
CGACTTCATTCCAGCTGCGG+CGG + chr1_3:73488282-73488301 Msa0139670:CDS 60.0%
GTGTCACGGCGGATATCCTC+TGG + chr1_3:73488323-73488342 Msa0139670:CDS 60.0%
! GGGGTATCCGTCAACGTCCA+TGG + chr1_3:73489992-73490011 Msa0139670:CDS 60.0%
CAGCTGAGATCCGTGACCCA+AGG + chr1_3:73490025-73490044 Msa0139670:CDS 60.0%
GCTGACATCGGAGCCTTCTC+TGG + chr1_3:73490342-73490361 Msa0139670:CDS 60.0%
GATGACCTGCCTTCCATCGC+AGG + chr1_3:73490732-73490751 Msa0139670:CDS 60.0%
ATTCCAGCTGCGGCGGCTGT+GGG + chr1_3:73488289-73488308 Msa0139670:CDS 65.0%
GATATCCGCCGTGACACGGC+GGG - chr1_3:73488320-73488339 None:intergenic 65.0%
GGATATCCGCCGTGACACGG+CGG - chr1_3:73488321-73488340 None:intergenic 65.0%
CATCGCCTGCGATGGAAGGC+AGG - chr1_3:73490740-73490759 None:intergenic 65.0%
CATTCCAGCTGCGGCGGCTG+TGG + chr1_3:73488288-73488307 Msa0139670:CDS 70.0%
GGGTGGCTCCCGCCGTGTCA+CGG + chr1_3:73488309-73488328 Msa0139670:CDS 75.0%
TGGCTCCCGCCGTGTCACGG+CGG + chr1_3:73488312-73488331 Msa0139670:CDS 75.0%
! CCACCCACAGCCGCCGCAGC+TGG - chr1_3:73488295-73488314 None:intergenic 80.0%
! CCAGCTGCGGCGGCTGTGGG+TGG + chr1_3:73488292-73488311 Msa0139670:CDS 80.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 73487952 73491336 73487952 ID=Msa0139670;Name=Msa0139670
chr1_3 mRNA 73487952 73491336 73487952 ID=Msa0139670-mRNA-1;Parent=Msa0139670;Name=Msa0139670-mRNA-1;_AED=0.04;_eAED=0.04;_QI=307|1|1|1|0.5|0.33|3|475|382
chr1_3 exon 73487952 73488547 73487952 ID=Msa0139670-mRNA-1:exon:25599;Parent=Msa0139670-mRNA-1
chr1_3 exon 73489908 73490805 73489908 ID=Msa0139670-mRNA-1:exon:25600;Parent=Msa0139670-mRNA-1
chr1_3 exon 73490900 73491336 73490900 ID=Msa0139670-mRNA-1:exon:25601;Parent=Msa0139670-mRNA-1
chr1_3 five_prime_UTR 73487952 73488258 73487952 ID=Msa0139670-mRNA-1:five_prime_utr;Parent=Msa0139670-mRNA-1
chr1_3 CDS 73488259 73488547 73488259 ID=Msa0139670-mRNA-1:cds;Parent=Msa0139670-mRNA-1
chr1_3 CDS 73489908 73490767 73489908 ID=Msa0139670-mRNA-1:cds;Parent=Msa0139670-mRNA-1
chr1_3 three_prime_UTR 73490768 73490805 73490768 ID=Msa0139670-mRNA-1:three_prime_utr;Parent=Msa0139670-mRNA-1
chr1_3 three_prime_UTR 73490900 73491336 73490900 ID=Msa0139670-mRNA-1:three_prime_utr;Parent=Msa0139670-mRNA-1
Gene Sequence

>Msa0139670

ATGTGTGGTGGAGCTATTATCTCCGACTTCATTCCAGCTGCGGCGGCTGTGGGTGGCTCCCGCCGTGTCACGGCGGATATCCTCTGGCCGAATTTGAGGAGGAAACCAAGTTCAAGGAAACCTTTTTTGCTTGACGATGATTTCGAGGCTGGGTTCAGAGAGTTTAAGGATGATTCTGATTTCGATGAAGACGAGGATGAAGATGATGATGAAGGGTTGTTGGTCGGTGTCAAAGGTTTCACCTTTGGTTCCAATAAGAACAGCAAATCTTCTAAGTCCTTTGTTCGTGGATCAAGTGCTGCAAAACCTGTTGCTTTGAATTCAAACAAGCTAGCTGAAAAGGATTCGAAGAGAAAGAGGAAGAATCAGTATAGGGGTATCCGTCAACGTCCATGGGGAAAATGGGCAGCTGAGATCCGTGACCCAAGGAAAGGAGTCCGTGTCTGGCTCGGAACTTTCAACACTGCTGAAGAAGCTGCAAGAGCTTATGATGCTGAAGCTAGGAGAATCCGTGGCAAGAAAGCCAAGGTGAATTTCCCTGAAGAGGCTCCAGTTGCTTCCTCAAAACGTCTCAAGAAAAGTCCTGAGACGCAGCTGTTGAATGAAAATCTGAACTCTTTAAAGCCAAACGGAAACCAAATGTTCAATTTCGGCGAAAATATGGAGAACTACTTTTCTCCTATGGATCAAGTGGAACAGAAACCATTGGTTAACAACCAGTATGCTGACATCGGAGCCTTCTCTGGAAACGGAGTGCAACTTACATCTGCTGATGTTAATGCTTATTTCAGTTCAGAGCATTCAAGCAATTCATTTGATTATTCTGATCTATGCTGGGGCGAACAAGGTCCAAAAACACCTGAGATTTCGTCTGTGTTTTCTGCTGCTGCTCCTAAGGAAGGCGAATCTCAGACGAATATGCTGTCTGACAACACTCAGGATATGCTGCCTATGCAAAATGATTCTGCAAAGACCCTCTCTGAGGAGCTTGCAGATATCGAATCCCAGCTGAAGTTCTTCGAGAACGATAACTGGAGTGATGCTTCATTGGCTGCTTTGCTTGGTGGAGACACAACTCAGGATGGTGGAAACACAATGAACCTCTGGAACTTCGATGACCTGCCTTCCATCGCAGGCGATGTTTTCTAA
Protein sequence

>Msa0139670

MCGGAIISDFIPAAAAVGGSRRVTADILWPNLRRKPSSRKPFLLDDDFEAGFREFKDDSDFDEDEDEDDDEGLLVGVKGFTFGSNKNSKSSKSFVRGSSAAKPVALNSNKLAEKDSKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDAEARRIRGKKAKVNFPEEAPVASSKRLKKSPETQLLNENLNSLKPNGNQMFNFGENMENYFSPMDQVEQKPLVNNQYADIGAFSGNGVQLTSADVNAYFSSEHSSNSFDYSDLCWGEQGPKTPEISSVFSAAAPKEGESQTNMLSDNTQDMLPMQNDSAKTLSEELADIESQLKFFENDNWSDASLAALLGGDTTQDGGNTMNLWNFDDLPSIAGDVF*