Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0376420 | XP_003602241.2 | 98.312 | 770 | 13 | 0 | 1 | 770 | 1 | 770 | 0.0 | 1585 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0376420 | sp|Q6F3I7|DAP4_PSEMX | 35.510 | 735 | 426 | 22 | 51 | 770 | 42 | 743 | 5.96e-134 | 417 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0376420 | A0A396IY90 | 98.312 | 770 | 13 | 0 | 1 | 770 | 1 | 770 | 0.0 | 1585 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010800 | Msa0376420 | 0.827690 | 1.361118e-54 | -8.615850e-47 |
| Msa0010910 | Msa0376420 | 0.816778 | 4.640265e-52 | -8.615850e-47 |
| Msa0074750 | Msa0376420 | 0.805918 | 1.058608e-49 | -8.615850e-47 |
| Msa0090970 | Msa0376420 | 0.811347 | 7.326916e-51 | -8.615850e-47 |
| Msa0094710 | Msa0376420 | 0.801662 | 8.100571e-49 | -8.615850e-47 |
| Msa0102140 | Msa0376420 | 0.801011 | 1.101137e-48 | -8.615850e-47 |
| Msa0124320 | Msa0376420 | 0.804335 | 2.270093e-49 | -8.615850e-47 |
| Msa0139670 | Msa0376420 | 0.811817 | 5.790970e-51 | -8.615850e-47 |
| Msa0183450 | Msa0376420 | 0.801939 | 7.106048e-49 | -8.615850e-47 |
| Msa0376420 | Msa0382370 | 0.811034 | 8.568024e-51 | -8.615850e-47 |
| Msa0376420 | Msa0388730 | 0.814177 | 1.759228e-51 | -8.615850e-47 |
| Msa0376420 | Msa0395980 | 0.821889 | 3.176021e-53 | -8.615850e-47 |
| Msa0376420 | Msa0403490 | 0.842819 | 2.049102e-58 | -8.615850e-47 |
| Msa0376420 | Msa0411240 | 0.804916 | 1.716435e-49 | -8.615850e-47 |
| Msa0376420 | Msa0432160 | 0.804356 | 2.246897e-49 | -8.615850e-47 |
| Msa0376420 | Msa0440510 | 0.808063 | 3.723673e-50 | -8.615850e-47 |
| Msa0376420 | Msa0476680 | 0.808534 | 2.954969e-50 | -8.615850e-47 |
| Msa0376420 | Msa0491000 | 0.813393 | 2.619110e-51 | -8.615850e-47 |
| Msa0376420 | Msa0516240 | 0.992033 | 6.422386e-191 | -8.615850e-47 |
| Msa0376420 | Msa0521010 | 0.809220 | 2.107275e-50 | -8.615850e-47 |
| Msa0376420 | Msa0529670 | 0.808126 | 3.610461e-50 | -8.615850e-47 |
| Msa0376420 | Msa0544170 | 0.819457 | 1.149961e-52 | -8.615850e-47 |
| Msa0376420 | Msa0581400 | 0.820032 | 8.495669e-53 | -8.615850e-47 |
| Msa0376420 | Msa0606080 | 0.815904 | 7.280528e-52 | -8.615850e-47 |
| Msa0376420 | Msa0645530 | 0.801157 | 1.027945e-48 | -8.615850e-47 |
| Msa0376420 | Msa0647030 | 0.804054 | 2.596784e-49 | -8.615850e-47 |
| Msa0376420 | Msa0649100 | 0.837146 | 6.174236e-57 | -8.615850e-47 |
| Msa0376420 | Msa0651560 | 0.816341 | 5.813552e-52 | -8.615850e-47 |
| Msa0376420 | Msa0697680 | 0.801724 | 7.867805e-49 | -8.615850e-47 |
| Msa0376420 | Msa0709120 | 0.810605 | 1.060577e-50 | -8.615850e-47 |
| Msa0376420 | Msa0712260 | 0.806924 | 6.494575e-50 | -8.615850e-47 |
| Msa0376420 | Msa0756380 | 0.812603 | 3.901870e-51 | -8.615850e-47 |
| Msa0376420 | Msa0789560 | 0.822938 | 1.812505e-53 | -8.615850e-47 |
| Msa0376420 | Msa0868190 | 0.814315 | 1.640305e-51 | -8.615850e-47 |
| Msa0376420 | Msa0985220 | 0.807769 | 4.299237e-50 | -8.615850e-47 |
| Msa0376420 | Msa1011250 | 0.802864 | 4.583395e-49 | -8.615850e-47 |
| Msa0376420 | Msa1022030 | 0.827145 | 1.839350e-54 | -8.615850e-47 |
| Msa0376420 | Msa1052620 | 0.816614 | 5.049521e-52 | -8.615850e-47 |
| Msa0376420 | Msa1089960 | 0.822105 | 2.829415e-53 | -8.615850e-47 |
| Msa0376420 | Msa1127430 | 0.827697 | 1.355441e-54 | -8.615850e-47 |
| Msa0376420 | Msa1201640 | 0.811521 | 6.716175e-51 | -8.615850e-47 |
| Msa0376420 | Msa1208370 | 0.804704 | 1.901468e-49 | -8.615850e-47 |
| Msa0376420 | Msa1208990 | 0.810565 | 1.082060e-50 | -8.615850e-47 |
| Msa0376420 | Msa1209190 | 0.846392 | 2.236190e-59 | -8.615850e-47 |
| Msa0376420 | Msa1214170 | 0.812903 | 3.354718e-51 | -8.615850e-47 |
| Msa0376420 | Msa1221330 | 0.800401 | 1.466340e-48 | -8.615850e-47 |
| Msa0376420 | Msa1234620 | 0.818959 | 1.492634e-52 | -8.615850e-47 |
| Msa0376420 | Msa1254620 | 0.800671 | 1.292032e-48 | -8.615850e-47 |
| Msa0376420 | Msa1330550 | 0.801013 | 1.099833e-48 | -8.615850e-47 |
| Msa0376420 | Msa1336040 | 0.814231 | 1.711445e-51 | -8.615850e-47 |
| Msa0376420 | Msa1339320 | 0.835539 | 1.582200e-56 | -8.615850e-47 |
| Msa0376420 | Msa1360020 | 0.817707 | 2.867206e-52 | -8.615850e-47 |
| Msa0376420 | Msa1366550 | 0.833694 | 4.603918e-56 | -8.615850e-47 |
| Msa0376420 | Msa1387240 | 0.812117 | 4.982448e-51 | -8.615850e-47 |
| Msa0376420 | Msa1391720 | 0.824641 | 7.231362e-54 | -8.615850e-47 |
| Msa0376420 | Msa1400930 | 0.814769 | 1.301345e-51 | -8.615850e-47 |
| Msa0376420 | Msa1411000 | 0.800554 | 1.365079e-48 | -8.615850e-47 |
| Msa0376420 | Msa1411980 | 0.822501 | 2.290343e-53 | -8.615850e-47 |
| Msa0376420 | Msa1426910 | 0.807467 | 4.983955e-50 | -8.615850e-47 |
| Msa0376420 | Msa1434040 | 0.814871 | 1.235323e-51 | -8.615850e-47 |
| Msa0376420 | Msa1454960 | 0.810412 | 1.167386e-50 | -8.615850e-47 |
| Msa0376420 | Msa1463030 | 0.822257 | 2.610010e-53 | -8.615850e-47 |
| Msa0244970 | Msa0376420 | 0.814546 | 1.457991e-51 | -8.615850e-47 |
| Msa0319290 | Msa0376420 | 0.807796 | 4.243947e-50 | -8.615850e-47 |
| Msa0320470 | Msa0376420 | 0.801452 | 8.946154e-49 | -8.615850e-47 |
| Msa0362890 | Msa0376420 | 0.807274 | 5.475595e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0376420 | MtrunA17_Chr3g0126791 | 98.312 | 770 | 13 | 0 | 1 | 770 | 1 | 770 | 0.0 | 1585 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0376420 | AT5G24260.1 | 68.182 | 748 | 228 | 8 | 29 | 770 | 3 | 746 | 0.0 | 1052 |
| Msa0376420 | AT5G24260.3 | 68.182 | 748 | 228 | 8 | 29 | 770 | 3 | 746 | 0.0 | 1052 |
| Msa0376420 | AT5G24260.4 | 68.182 | 748 | 228 | 8 | 29 | 770 | 3 | 746 | 0.0 | 1052 |
| Msa0376420 | AT5G24260.2 | 68.182 | 748 | 228 | 8 | 29 | 770 | 3 | 746 | 0.0 | 1052 |
| Msa0376420 | AT5G24260.5 | 67.908 | 564 | 174 | 6 | 29 | 588 | 3 | 563 | 0.0 | 773 |
| Msa0376420 | AT5G36210.1 | 24.074 | 270 | 180 | 9 | 512 | 768 | 452 | 709 | 8.27e-12 | 69.3 |
Find 218 sgRNAs with CRISPR-Local
Find 484 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAACCATGATTAATGTTTA+TGG | 0.150825 | 3_1:-76523857 | Msa0376420:CDS |
| ATAAATAAATAAGGGAAATT+TGG | 0.165667 | 3_1:-76529440 | Msa0376420:five_prime_UTR |
| AAATAACAATTCTTGTTTAT+TGG | 0.169608 | 3_1:+76527970 | None:intergenic |
| CGAGGCATGTGGCGCTCATC+TGG | 0.182815 | 3_1:+76522539 | None:intergenic |
| AATATTTGGCAAGAGTTAAT+TGG | 0.215197 | 3_1:-76524579 | Msa0376420:CDS |
| ATAAATTGAATAAATAAATA+AGG | 0.233545 | 3_1:-76529449 | Msa0376420:five_prime_UTR |
| CTCAAGATAACTGGCCATTT+GGG | 0.259487 | 3_1:-76522331 | Msa0376420:three_prime_UTR |
| TTTCTGTTTAATGTATTATC+AGG | 0.274208 | 3_1:+76528016 | None:intergenic |
| AGACAACGAGGATGAATATT+TGG | 0.301631 | 3_1:-76524593 | Msa0376420:CDS |
| CTAGGGGTTGTTTCGGTAGC+TGG | 0.308805 | 3_1:-76524664 | Msa0376420:CDS |
| GATGCTGATGATCAGTTTAC+TGG | 0.311598 | 3_1:-76522932 | Msa0376420:CDS |
| AGGTTGAGGGAACGCGGTTT+AGG | 0.320038 | 3_1:-76527884 | Msa0376420:CDS |
| GATGCAAACGGGACTTGTTT+AGG | 0.320275 | 3_1:-76524325 | Msa0376420:CDS |
| TATACTAACCTTCGATTCAT+AGG | 0.324241 | 3_1:+76522124 | None:intergenic |
| TCCTGGTGCCGTTACCTGCT+GGG | 0.325019 | 3_1:-76527814 | Msa0376420:CDS |
| GCTTCTCTTCATTTAATGAT+TGG | 0.337665 | 3_1:-76522156 | Msa0376420:three_prime_UTR |
| GTCCTGGTGCCGTTACCTGC+TGG | 0.337728 | 3_1:-76527815 | Msa0376420:CDS |
| ACCCATGGTGCAAAGGAAAA+TGG | 0.337836 | 3_1:-76526793 | Msa0376420:CDS |
| ACTCAAGATAACTGGCCATT+TGG | 0.343452 | 3_1:-76522332 | Msa0376420:three_prime_UTR |
| GAAATAAAGGCATCTTAGTT+TGG | 0.353249 | 3_1:-76523766 | Msa0376420:CDS |
| GCGCAATACTTGAGAAATAA+AGG | 0.356785 | 3_1:-76523779 | Msa0376420:CDS |
| GCTACTTTACTCAAGATAAC+TGG | 0.358447 | 3_1:-76522340 | Msa0376420:three_prime_UTR |
| TTGCCATCTGAAAATAAATC+AGG | 0.362673 | 3_1:-76522719 | Msa0376420:CDS |
| TTGCAGAATTTGGTCACATT+GGG | 0.364383 | 3_1:-76522883 | Msa0376420:CDS |
| ATATAGCGATCGAGTTTATA+TGG | 0.367319 | 3_1:-76522513 | Msa0376420:CDS |
| GGTATTACTATGTTCGTTAG+AGG | 0.370356 | 3_1:-76524047 | Msa0376420:CDS |
| TCCCTTGCCATGTGTTAGTC+TGG | 0.373715 | 3_1:+76524144 | None:intergenic |
| AATTGAGGAGGGAGAGGTTG+AGG | 0.378937 | 3_1:-76527898 | Msa0376420:CDS |
| TACAGCTCGTTTCTAACTCT+TGG | 0.390338 | 3_1:-76523823 | Msa0376420:CDS |
| GACTGTATTTCAACAATCTC+TGG | 0.393381 | 3_1:+76523950 | None:intergenic |
| GGGTGAAGACGAACTCAAAA+AGG | 0.393474 | 3_1:-76527844 | Msa0376420:CDS |
| GAGGAGATGGATAGGAAAAC+TGG | 0.395551 | 3_1:-76524850 | Msa0376420:CDS |
| TTGCCATGTGTTAGTCTGGT+AGG | 0.399815 | 3_1:+76524148 | None:intergenic |
| GGACTAAAACTTATTGAAGT+TGG | 0.400840 | 3_1:+76528070 | None:intergenic |
| ATAGCACACTTGAAGAAATC+TGG | 0.401421 | 3_1:+76522806 | None:intergenic |
| AGATTACAGACATGTTGAAT+TGG | 0.407614 | 3_1:+76529301 | None:intergenic |
| GACGATGGTACTACCTTGTA+TGG | 0.411006 | 3_1:-76523926 | Msa0376420:CDS |
| TGCCATGTGTTAGTCTGGTA+GGG | 0.411102 | 3_1:+76524149 | None:intergenic |
| TATCACCTGTGCTATATATT+CGG | 0.414471 | 3_1:+76526237 | None:intergenic |
| AGGACAAAGGAGAGATATAT+TGG | 0.414862 | 3_1:-76524476 | Msa0376420:CDS |
| AAGCCTGATGCTTCAAGATT+CGG | 0.415695 | 3_1:-76523893 | Msa0376420:CDS |
| ATTAAGTTTGATATTAGAAC+AGG | 0.416668 | 3_1:-76524496 | Msa0376420:CDS |
| AGACAGATGAGGGTCAATAA+TGG | 0.417702 | 3_1:+76526897 | None:intergenic |
| GGCTATTTAAAGCACAAACT+TGG | 0.425012 | 3_1:-76522962 | Msa0376420:CDS |
| CTCTATATTCATGATGCAAA+CGG | 0.425144 | 3_1:-76524337 | Msa0376420:CDS |
| TAAGAAATCAAACTATCATC+TGG | 0.425613 | 3_1:+76528049 | None:intergenic |
| TTCAACTCTATAGATAGATA+TGG | 0.425933 | 3_1:+76529396 | None:intergenic |
| TGGATAGGAAAACTGGATAC+TGG | 0.426305 | 3_1:-76524843 | Msa0376420:CDS |
| GGATTCAAGAGGACTATCTA+AGG | 0.426424 | 3_1:+76524222 | None:intergenic |
| CTAATCAGTTATGAGACAAT+TGG | 0.427499 | 3_1:+76522362 | None:intergenic |
| CTTGCAGAATTTGGTCACAT+TGG | 0.428504 | 3_1:-76522884 | Msa0376420:CDS |
| TATTGCGCAATCTCTTCAAC+CGG | 0.431964 | 3_1:+76528115 | None:intergenic |
| GCATTTGAAGCTCCTGCAAA+AGG | 0.434061 | 3_1:+76524697 | None:intergenic |
| TAAATTGAATAAATAAATAA+GGG | 0.434807 | 3_1:-76529448 | Msa0376420:five_prime_UTR |
| TTGGTAACTCCTTTATCAAA+AGG | 0.438879 | 3_1:+76524409 | None:intergenic |
| GTCACATTGGGTTGTACGGT+TGG | 0.441897 | 3_1:-76522871 | Msa0376420:CDS |
| GACAGATGAGGGTCAATAAT+GGG | 0.442346 | 3_1:+76526898 | None:intergenic |
| ATCTGGGCTAGTGAGAAATC+AGG | 0.443445 | 3_1:-76524370 | Msa0376420:CDS |
| AATGCGCCTAGGGGTTGTTT+CGG | 0.444593 | 3_1:-76524671 | Msa0376420:CDS |
| ATCAATGCACTTGTGGCGGC+TGG | 0.447952 | 3_1:-76522587 | Msa0376420:CDS |
| TTCTCAAGTATTGCGCTCTC+AGG | 0.448351 | 3_1:+76523786 | None:intergenic |
| CTTGAATGGGGCTCAAAAGA+TGG | 0.449053 | 3_1:-76529519 | None:intergenic |
| CAAGTTATTTATTCAGTTGG+TGG | 0.449472 | 3_1:+76529371 | None:intergenic |
| TTCTTCAAGTGTGCTATAGC+TGG | 0.449635 | 3_1:-76522800 | Msa0376420:CDS |
| TATCCATCCCACGATGTAAC+GGG | 0.450800 | 3_1:+76522773 | None:intergenic |
| GATAAATCCACCTGAAAACT+TGG | 0.452007 | 3_1:+76524390 | None:intergenic |
| TTTATATGGAAGAGAGGATG+TGG | 0.452489 | 3_1:-76522499 | Msa0376420:CDS |
| CCTGAGTTCGTGGTGGAAGA+TGG | 0.453664 | 3_1:+76529184 | None:intergenic |
| CTCTCATCAAGTCCGCCATC+AGG | 0.458202 | 3_1:+76527941 | None:intergenic |
| TAACAAGTTATTTATTCAGT+TGG | 0.458311 | 3_1:+76529368 | None:intergenic |
| GGGTTGTACGGTTGGAGCTA+TGG | 0.460113 | 3_1:-76522863 | Msa0376420:CDS |
| ACAGGTCTAATATATTTCAC+TGG | 0.460672 | 3_1:-76524247 | Msa0376420:CDS |
| AAGGTTAGTATAACTAGGAT+TGG | 0.461439 | 3_1:-76522113 | Msa0376420:three_prime_UTR |
| ATGGGCGAAGCTGGTATACT+AGG | 0.462537 | 3_1:+76526916 | None:intergenic |
| CCCCAGCAGGTAACGGCACC+AGG | 0.465133 | 3_1:+76527813 | None:intergenic |
| CAAATGCTAAAATGCGCCTA+GGG | 0.465579 | 3_1:-76524681 | Msa0376420:CDS |
| ACCACCATAAACATTAATCA+TGG | 0.465968 | 3_1:+76523853 | None:intergenic |
| ATTGAGGAGGGAGAGGTTGA+GGG | 0.466179 | 3_1:-76527897 | Msa0376420:CDS |
| GAAGCTCCTGCAAAAGGATA+AGG | 0.468977 | 3_1:+76524703 | None:intergenic |
| TAGCTGGAGGCTCCACCACT+TGG | 0.476298 | 3_1:-76524648 | Msa0376420:CDS |
| CTCAGTTGGCACAGATGCAC+AGG | 0.476702 | 3_1:-76524734 | Msa0376420:CDS |
| AACTGGATACTGGTGGTCAC+TGG | 0.484024 | 3_1:-76524833 | Msa0376420:CDS |
| AAGTTTAGCACAGTATAAGT+TGG | 0.485619 | 3_1:+76524201 | None:intergenic |
| TTGAATGGGGCTCAAAAGAT+GGG | 0.488768 | 3_1:-76529518 | None:intergenic |
| TTTCTGATTTCAGGAGGAGA+TGG | 0.489845 | 3_1:-76524863 | Msa0376420:intron |
| GCAAGAGTTAATTGGATGCA+TGG | 0.490094 | 3_1:-76524571 | Msa0376420:CDS |
| CTTGGATGGATCTTGTCTGT+GGG | 0.491023 | 3_1:-76524630 | Msa0376420:CDS |
| TTTGGTCACATTGGGTTGTA+CGG | 0.492231 | 3_1:-76522875 | Msa0376420:CDS |
| TGCCAACTGAGCTTCTACCT+TGG | 0.492261 | 3_1:+76524746 | None:intergenic |
| TCTATATTCATGATGCAAAC+GGG | 0.493596 | 3_1:-76524336 | Msa0376420:CDS |
| GGTCCGAATCTTGAAGCATC+AGG | 0.494458 | 3_1:+76523890 | None:intergenic |
| ATACCCTAGGTGGACAACTA+AGG | 0.496108 | 3_1:+76524065 | None:intergenic |
| TCACTGCTCAGATCATAAAC+AGG | 0.497243 | 3_1:-76524540 | Msa0376420:CDS |
| CATCCATTCACCTTCAGTGA+TGG | 0.500240 | 3_1:+76524300 | None:intergenic |
| CGCTATATCGCCGAGGCATG+TGG | 0.502434 | 3_1:+76522528 | None:intergenic |
| TAAGCAAGCATAGATCCATC+TGG | 0.503242 | 3_1:+76526874 | None:intergenic |
| CCATCTTCCACCACGAACTC+AGG | 0.504637 | 3_1:-76529184 | Msa0376420:intron |
| TGATGAGAGTAATATTTCTC+CGG | 0.511360 | 3_1:-76527927 | Msa0376420:CDS |
| ATTTGTGTATTGCAGACTCA+CGG | 0.511897 | 3_1:-76526265 | Msa0376420:intron |
| AGAAATCTGGATATCTTGAA+AGG | 0.514134 | 3_1:+76522819 | None:intergenic |
| GATTGCGCAATATCCATTGC+CGG | 0.514911 | 3_1:-76528104 | Msa0376420:CDS |
| GGGTCAATAATGGGCGAAGC+TGG | 0.515828 | 3_1:+76526907 | None:intergenic |
| CAGATGAGCGCCACATGCCT+CGG | 0.517161 | 3_1:-76522538 | Msa0376420:CDS |
| GACCCATCACTGAAGGTGAA+TGG | 0.517518 | 3_1:-76524303 | Msa0376420:CDS |
| GCCATGTGTTAGTCTGGTAG+GGG | 0.518664 | 3_1:+76524150 | None:intergenic |
| TTCCCCTCATCTTGTGCACA+TGG | 0.520787 | 3_1:+76522672 | None:intergenic |
| GTATCCATCCCACGATGTAA+CGG | 0.520792 | 3_1:+76522772 | None:intergenic |
| ATGAAATGAAAAGCCCCAAA+TGG | 0.524398 | 3_1:+76522317 | None:intergenic |
| GAAGTTGGTGATACATATCC+CGG | 0.524663 | 3_1:+76528085 | None:intergenic |
| TAAAGGCATCTTAGTTTGGA+AGG | 0.526073 | 3_1:-76523762 | Msa0376420:intron |
| CTCCCTTAGTTGTCCACCTA+GGG | 0.532240 | 3_1:-76524068 | Msa0376420:CDS |
| TTGGATTGTCTTCAAGTGAA+AGG | 0.534369 | 3_1:+76529320 | None:intergenic |
| GAAATCTGGATATCTTGAAA+GGG | 0.534407 | 3_1:+76522820 | None:intergenic |
| GGTATTTGCTGCTCATACAA+AGG | 0.535611 | 3_1:+76524007 | None:intergenic |
| GGATGTGGGAATTCATTGAC+AGG | 0.535650 | 3_1:-76522484 | Msa0376420:CDS |
| GATTTCAGGAGGAGATGGAT+AGG | 0.537264 | 3_1:-76524858 | Msa0376420:intron |
| TCATCAAGTCCGCCATCAGG+CGG | 0.538032 | 3_1:+76527944 | None:intergenic |
| ATCCATTCACCTTCAGTGAT+GGG | 0.538637 | 3_1:+76524301 | None:intergenic |
| GACTAATAAAATGTGATGAT+CGG | 0.539042 | 3_1:+76522271 | None:intergenic |
| CACCAAGGTAGAAGCTCAGT+TGG | 0.540984 | 3_1:-76524748 | Msa0376420:CDS |
| CAACAGAGGAACTTCTAGAC+GGG | 0.542457 | 3_1:-76522999 | Msa0376420:CDS |
| ACTTGGATGGATCTTGTCTG+TGG | 0.542619 | 3_1:-76524631 | Msa0376420:CDS |
| TTGTACGGTTGGAGCTATGG+CGG | 0.546095 | 3_1:-76522860 | Msa0376420:CDS |
| AGAAAGTAACTAACCCCAGC+AGG | 0.546182 | 3_1:+76527800 | None:intergenic |
| TTTGTGTATTGCAGACTCAC+GGG | 0.547840 | 3_1:-76526264 | Msa0376420:intron |
| GGAAGGTTGTTGATTGTGCA+TGG | 0.549313 | 3_1:-76522653 | Msa0376420:CDS |
| GCAAATCGCCGGTGTGAATG+AGG | 0.549981 | 3_1:-76524272 | Msa0376420:CDS |
| GAGGCATGTGGCGCTCATCT+GGG | 0.550136 | 3_1:+76522540 | None:intergenic |
| TTACTATGTTCGTTAGAGGA+TGG | 0.552609 | 3_1:-76524043 | Msa0376420:CDS |
| TGAACCATGTGCACAAGATG+AGG | 0.552873 | 3_1:-76522676 | Msa0376420:CDS |
| TACCAGACTAACACATGGCA+AGG | 0.554093 | 3_1:-76524146 | Msa0376420:CDS |
| TGTACGGTTGGAGCTATGGC+GGG | 0.556071 | 3_1:-76522859 | Msa0376420:CDS |
| CAACAATCTCTGGAGGCTCA+AGG | 0.557617 | 3_1:+76523960 | None:intergenic |
| TTATTTAGCCCGCCTGATGG+CGG | 0.560074 | 3_1:-76527953 | Msa0376420:CDS |
| TGAAATCTAACCTGAGTTCG+TGG | 0.561775 | 3_1:+76529174 | None:intergenic |
| TCAAATGCTAAAATGCGCCT+AGG | 0.562678 | 3_1:-76524682 | Msa0376420:CDS |
| ATTGCGCAATATCCATTGCC+GGG | 0.564730 | 3_1:-76528103 | Msa0376420:CDS |
| TGGTAGAAGAGAACAAAACT+TGG | 0.565766 | 3_1:-76524456 | Msa0376420:CDS |
| TTAGAAACGAGCTGTACACT+TGG | 0.569407 | 3_1:+76523830 | None:intergenic |
| GACCCTCATCTGTCTCCAGA+TGG | 0.570083 | 3_1:-76526889 | Msa0376420:CDS |
| TACCCTAGGTGGACAACTAA+GGG | 0.570439 | 3_1:+76524066 | None:intergenic |
| CTTGTAAAGAGCTCCATACA+AGG | 0.571379 | 3_1:+76523913 | None:intergenic |
| TAAAAGAACTTAAACTACAC+TGG | 0.572161 | 3_1:+76522405 | None:intergenic |
| GCAGTTGACCCATGGTGCAA+AGG | 0.573336 | 3_1:-76526800 | Msa0376420:CDS |
| TTATATGGAAGAGAGGATGT+GGG | 0.574511 | 3_1:-76522498 | Msa0376420:CDS |
| CATCAAGTCCGCCATCAGGC+GGG | 0.574630 | 3_1:+76527945 | None:intergenic |
| GAACCATGTGCACAAGATGA+GGG | 0.575361 | 3_1:-76522675 | Msa0376420:CDS |
| CCTGGTGCCGTTACCTGCTG+GGG | 0.575753 | 3_1:-76527813 | Msa0376420:intron |
| TCAAGATAACTGGCCATTTG+GGG | 0.576921 | 3_1:-76522330 | Msa0376420:three_prime_UTR |
| TAACTAACCCCAGCAGGTAA+CGG | 0.583832 | 3_1:+76527806 | None:intergenic |
| ATTAGTTGATGAATGAGAAG+AGG | 0.584574 | 3_1:-76528225 | Msa0376420:exon |
| TGGTGCACCCGTTACATCGT+GGG | 0.584883 | 3_1:-76522780 | Msa0376420:CDS |
| TTGTTATTTAGCCCGCCTGA+TGG | 0.586114 | 3_1:-76527956 | Msa0376420:CDS |
| TGGAGGCTCCACCACTTGGA+TGG | 0.587121 | 3_1:-76524644 | Msa0376420:CDS |
| ACCATGATTAATGTTTATGG+TGG | 0.587366 | 3_1:-76523854 | Msa0376420:CDS |
| GCCGGTGTGAATGAGGCCAC+AGG | 0.587804 | 3_1:-76524265 | Msa0376420:CDS |
| ACTCCCTTAGTTGTCCACCT+AGG | 0.588428 | 3_1:-76524069 | Msa0376420:CDS |
| ATCCATCTGGAGACAGATGA+GGG | 0.588739 | 3_1:+76526887 | None:intergenic |
| TGTTTAGGACCCATCACTGA+AGG | 0.590067 | 3_1:-76524310 | Msa0376420:CDS |
| TTGGATGGATCTTGTCTGTG+GGG | 0.592092 | 3_1:-76524629 | Msa0376420:CDS |
| CAGGTCTAATATATTTCACT+GGG | 0.593282 | 3_1:-76524246 | Msa0376420:CDS |
| ATGTTCGCATGTGATGATCA+AGG | 0.595720 | 3_1:+76524107 | None:intergenic |
| TGGATGGATCTTGTCTGTGG+GGG | 0.597512 | 3_1:-76524628 | Msa0376420:CDS |
| CAAGACTTCCTATGAATCGA+AGG | 0.599983 | 3_1:-76522132 | Msa0376420:three_prime_UTR |
| AGGGAGAGGTTGAGGGAACG+CGG | 0.601626 | 3_1:-76527890 | Msa0376420:CDS |
| GGGGTTGTTTCGGTAGCTGG+AGG | 0.602505 | 3_1:-76524661 | Msa0376420:CDS |
| CAGCTACCGAAACAACCCCT+AGG | 0.603315 | 3_1:+76524665 | None:intergenic |
| ACATCATTGAAGTCTGTCAC+AGG | 0.604346 | 3_1:+76528166 | None:intergenic |
| TGCCATCTGAAAATAAATCA+GGG | 0.605999 | 3_1:-76522718 | Msa0376420:CDS |
| GGTGATACATATCCCGGCAA+TGG | 0.606988 | 3_1:+76528091 | None:intergenic |
| GACAAGATCCATCCAAGTGG+TGG | 0.607099 | 3_1:+76524636 | None:intergenic |
| ATGTGCACAAGATGAGGGGA+AGG | 0.614216 | 3_1:-76522670 | Msa0376420:CDS |
| GCTTGCCGAATATATAGCAC+AGG | 0.616409 | 3_1:-76526242 | Msa0376420:intron |
| ATCGAGTTTATATGGAAGAG+AGG | 0.616918 | 3_1:-76522505 | Msa0376420:CDS |
| TCGCATTACACAAACACCTC+CGG | 0.616938 | 3_1:+76528251 | None:intergenic |
| ATTCTACACAGAGAAATACA+TGG | 0.617945 | 3_1:-76522744 | Msa0376420:CDS |
| GATCCATCTGGAGACAGATG+AGG | 0.619816 | 3_1:+76526886 | None:intergenic |
| AATCGAAGGTTAGTATAACT+AGG | 0.621758 | 3_1:-76522118 | Msa0376420:three_prime_UTR |
| AAGGCTTATCAATGCACTTG+TGG | 0.626461 | 3_1:-76522594 | Msa0376420:CDS |
| CAGTATAAGTTGGATTCAAG+AGG | 0.627056 | 3_1:+76524211 | None:intergenic |
| TTGATATTAGAACAGGACAA+AGG | 0.629145 | 3_1:-76524489 | Msa0376420:CDS |
| GCTTATCAATGCACTTGTGG+CGG | 0.629640 | 3_1:-76522591 | Msa0376420:CDS |
| AACCATGTGCACAAGATGAG+GGG | 0.630415 | 3_1:-76522674 | Msa0376420:CDS |
| ACAACAGAGGAACTTCTAGA+CGG | 0.635072 | 3_1:-76523000 | Msa0376420:CDS |
| GCACCCGTTACATCGTGGGA+TGG | 0.637197 | 3_1:-76522776 | Msa0376420:CDS |
| CATCACTGAAGGTGAATGGA+TGG | 0.651164 | 3_1:-76524299 | Msa0376420:CDS |
| TTCTACACAGAGAAATACAT+GGG | 0.652607 | 3_1:-76522743 | Msa0376420:CDS |
| CTGGTGCACCCGTTACATCG+TGG | 0.652853 | 3_1:-76522781 | Msa0376420:CDS |
| AGTGAAATATATTAGACCTG+TGG | 0.653575 | 3_1:+76524249 | None:intergenic |
| GAACATAGTAATACCCTAGG+TGG | 0.657301 | 3_1:+76524055 | None:intergenic |
| AGTCTGGTAGGGGCTTGAAG+TGG | 0.659372 | 3_1:+76524160 | None:intergenic |
| AGGAGTGACACGATACGAGT+GGG | 0.664921 | 3_1:-76527864 | Msa0376420:CDS |
| TAGGAGTGACACGATACGAG+TGG | 0.665515 | 3_1:-76527865 | Msa0376420:CDS |
| ATTGCGCAATCTCTTCAACC+GGG | 0.665780 | 3_1:+76528116 | None:intergenic |
| ACCAGACTAACACATGGCAA+GGG | 0.666632 | 3_1:-76524145 | Msa0376420:CDS |
| ACCTGTGGCCTCATTCACAC+CGG | 0.667979 | 3_1:+76524264 | None:intergenic |
| AACAGAGGAACTTCTAGACG+GGG | 0.668246 | 3_1:-76522998 | Msa0376420:CDS |
| CGAGCTAAAAGCAATGAGAG+AGG | 0.668312 | 3_1:+76522217 | None:intergenic |
| TGTATTTCAACAATCTCTGG+AGG | 0.668633 | 3_1:+76523953 | None:intergenic |
| GAATCAAAGCAGTTGACCCA+TGG | 0.675898 | 3_1:-76526808 | Msa0376420:CDS |
| TGGTGCATAATTCTGAAAAG+CGG | 0.676516 | 3_1:+76524766 | None:intergenic |
| TGAATGGGGCTCAAAAGATG+GGG | 0.680723 | 3_1:-76529517 | None:intergenic |
| TGTTGACAGTTAGACAACAG+AGG | 0.684363 | 3_1:-76523013 | Msa0376420:intron |
| AACGAACATAGTAATACCCT+AGG | 0.685165 | 3_1:+76524052 | None:intergenic |
| GCCCCTACCAGACTAACACA+TGG | 0.695198 | 3_1:-76524151 | Msa0376420:CDS |
| AAATGCTAAAATGCGCCTAG+GGG | 0.695946 | 3_1:-76524680 | Msa0376420:CDS |
| TGGATGGTTGAGCAAATCGC+CGG | 0.698018 | 3_1:-76524283 | Msa0376420:CDS |
| ATAGGAAAACTGGATACTGG+TGG | 0.700243 | 3_1:-76524840 | Msa0376420:CDS |
| ATCAGTTTACTGGAGCAGAG+TGG | 0.703312 | 3_1:-76522922 | Msa0376420:CDS |
| GTTGAAATACAGTCCGACGA+TGG | 0.705542 | 3_1:-76523941 | Msa0376420:CDS |
| CTCCTGCAAAAGGATAAGGA+TGG | 0.706392 | 3_1:+76524707 | None:intergenic |
| GATGTGCAAAATCTTGACGA+CGG | 0.706842 | 3_1:-76528148 | Msa0376420:CDS |
| ATACAAGGTAGTACCATCGT+CGG | 0.708380 | 3_1:+76523928 | None:intergenic |
| AATCTAACCTGAGTTCGTGG+TGG | 0.710592 | 3_1:+76529177 | None:intergenic |
| ACTCGATCGCTATATCGCCG+AGG | 0.738819 | 3_1:+76522521 | None:intergenic |
| ACAGAGGAACTTCTAGACGG+GGG | 0.740212 | 3_1:-76522997 | Msa0376420:CDS |
| ACAGACAAGATCCATCCAAG+TGG | 0.742236 | 3_1:+76524633 | None:intergenic |
| TGTGAAAGAACTAGACAACG+AGG | 0.799641 | 3_1:-76524605 | Msa0376420:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATTTATTTATTTATTTT+TGG | - | chr3_1:76524353-76524372 | Msa0376420:CDS | 0.0% |
| !!! | TTTATTTTTTTCTTTTTATG+CGG | + | chr3_1:76522127-76522146 | None:intergenic | 10.0% |
| !!! | AAAAAAAAAAAAGACTTTTT+GGG | + | chr3_1:76522656-76522675 | None:intergenic | 10.0% |
| !!! | AAAAAAAAAAAAAGACTTTT+TGG | + | chr3_1:76522657-76522676 | None:intergenic | 10.0% |
| !!! | ATTTTTACTTCAAAATTTAT+TGG | + | chr3_1:76523125-76523144 | None:intergenic | 10.0% |
| !! | TATTATGAATGTTATTAATA+CGG | - | chr3_1:76523270-76523289 | Msa0376420:intron | 10.0% |
| !!! | TTTTTTTATTGGTTTAAAAA+TGG | - | chr3_1:76526202-76526221 | Msa0376420:intron | 10.0% |
| !! | TTAATTAATTTATAATTGCT+AGG | + | chr3_1:76526249-76526268 | None:intergenic | 10.0% |
| !! | ATAAATAAATAAGGGAAATT+TGG | - | chr3_1:76522163-76522182 | Msa0376420:three_prime_UTR | 15.0% |
| !!! | TGATATTTTGAATTGAATAA+CGG | + | chr3_1:76522469-76522488 | None:intergenic | 15.0% |
| !!! | CTTTATCTTTTTTTCTTTTA+TGG | - | chr3_1:76522561-76522580 | Msa0376420:CDS | 15.0% |
| !!! | AAATAACAATTCTTGTTTAT+TGG | + | chr3_1:76523636-76523655 | None:intergenic | 15.0% |
| !! | ATATCTATATCTATTGAAAA+GGG | + | chr3_1:76524052-76524071 | None:intergenic | 15.0% |
| !! | AATATCTATATCTATTGAAA+AGG | + | chr3_1:76524053-76524072 | None:intergenic | 15.0% |
| !! | AAATACAATAAAATTCAGAA+AGG | + | chr3_1:76524168-76524187 | None:intergenic | 15.0% |
| !!! | TCTTTAGAAAAAAATGAATT+TGG | - | chr3_1:76524188-76524207 | Msa0376420:CDS | 15.0% |
| !!! | ATATATATATTCATTTTGGT+AGG | - | chr3_1:76526631-76526650 | Msa0376420:intron | 15.0% |
| !!! | ATGAATTGATTCAATAAAAT+AGG | + | chr3_1:76528494-76528513 | None:intergenic | 15.0% |
| !! | TAACAAGTTATTTATTCAGT+TGG | + | chr3_1:76522238-76522257 | None:intergenic | 20.0% |
| !! | GATAGTTTGATGAAAATAAA+AGG | + | chr3_1:76522335-76522354 | None:intergenic | 20.0% |
| !! | ATTCACATGAATAACAAAAA+TGG | + | chr3_1:76522788-76522807 | None:intergenic | 20.0% |
| !!! | AATTCTTTTAAGTGTATGTT+TGG | - | chr3_1:76522810-76522829 | Msa0376420:CDS | 20.0% |
| !!! | AAAATTGATTTTGACATGTT+TGG | - | chr3_1:76522851-76522870 | Msa0376420:CDS | 20.0% |
| !! | TAAAATACTTAGTGTATGTT+TGG | + | chr3_1:76523097-76523116 | None:intergenic | 20.0% |
| !!! | AAACATACACTAAGTATTTT+AGG | - | chr3_1:76523096-76523115 | Msa0376420:intron | 20.0% |
| !! | TTTCTGTTTAATGTATTATC+AGG | + | chr3_1:76523590-76523609 | None:intergenic | 20.0% |
| !!! | ATTTATTTTTGGAATGAAAG+AGG | - | chr3_1:76524364-76524383 | Msa0376420:CDS | 20.0% |
| !!! | TTTATTTTTGGAATGAAAGA+GGG | - | chr3_1:76524365-76524384 | Msa0376420:CDS | 20.0% |
| !! | AATGAATGCAAAATACAAAA+AGG | + | chr3_1:76524570-76524589 | None:intergenic | 20.0% |
| !! | TTAACAACAAAAAAGTTAGA+TGG | - | chr3_1:76524969-76524988 | Msa0376420:intron | 20.0% |
| !! | TTTAAATAATCAGTTATGCA+TGG | - | chr3_1:76525245-76525264 | Msa0376420:intron | 20.0% |
| !!! | ACGTGTATTTTAATCTATTT+TGG | - | chr3_1:76525414-76525433 | Msa0376420:intron | 20.0% |
| !!! | CGTGTATTTTAATCTATTTT+GGG | - | chr3_1:76525415-76525434 | Msa0376420:intron | 20.0% |
| !! | AGACAAAAACTGTTATATTT+CGG | + | chr3_1:76525749-76525768 | None:intergenic | 20.0% |
| !! | ATTCATAGTTATAGAAGAAT+TGG | + | chr3_1:76525995-76526014 | None:intergenic | 20.0% |
| !! | AATAAATGAATACAAAACCT+GGG | + | chr3_1:76526045-76526064 | None:intergenic | 20.0% |
| !! | TATCAATATCCTTTAAATAG+AGG | + | chr3_1:76526097-76526116 | None:intergenic | 20.0% |
| !!! | GAATGATAGAGTTTTTTTAT+TGG | - | chr3_1:76526191-76526210 | Msa0376420:intron | 20.0% |
| !! | TTATAATTGCTAGGAAATAT+AGG | + | chr3_1:76526240-76526259 | None:intergenic | 20.0% |
| !! | TGACTAAATTATGAATCATA+AGG | + | chr3_1:76526497-76526516 | None:intergenic | 20.0% |
| !! | TATGATTCATAATTTAGTCA+TGG | - | chr3_1:76526497-76526516 | Msa0376420:intron | 20.0% |
| !!! | GTTTTATTGCATATTATGTA+TGG | - | chr3_1:76526560-76526579 | Msa0376420:intron | 20.0% |
| !! | AAATGCAAGATTGTTAAAAT+AGG | + | chr3_1:76526679-76526698 | None:intergenic | 20.0% |
| !! | ATTAAGTTTGATATTAGAAC+AGG | - | chr3_1:76527107-76527126 | Msa0376420:intron | 20.0% |
| !! | AAAACCATGATTAATGTTTA+TGG | - | chr3_1:76527746-76527765 | Msa0376420:intron | 20.0% |
| !! | TCATAATCAAGTAAAATTCA+GGG | + | chr3_1:76527873-76527892 | None:intergenic | 20.0% |
| !! | ATCATAATCAAGTAAAATTC+AGG | + | chr3_1:76527874-76527893 | None:intergenic | 20.0% |
| !! | TGATGTAAATATGATTAAGA+TGG | - | chr3_1:76528081-76528100 | Msa0376420:CDS | 20.0% |
| !! | GATGTAAATATGATTAAGAT+GGG | - | chr3_1:76528082-76528101 | Msa0376420:CDS | 20.0% |
| !!! | CATTTTCCATGTATAAATAT+GGG | + | chr3_1:76528113-76528132 | None:intergenic | 20.0% |
| !!! | ACATTTTCCATGTATAAATA+TGG | + | chr3_1:76528114-76528133 | None:intergenic | 20.0% |
| !! | TGAATTGGACAAAAAATTAT+AGG | + | chr3_1:76528411-76528430 | None:intergenic | 20.0% |
| !!! | AATTTAAAGTGACTTATGTT+TGG | + | chr3_1:76528451-76528470 | None:intergenic | 20.0% |
| !! | AAGGAAAGTAATAATTAACA+TGG | + | chr3_1:76528571-76528590 | None:intergenic | 20.0% |
| ! | TTCAACTCTATAGATAGATA+TGG | + | chr3_1:76522210-76522229 | None:intergenic | 25.0% |
| !!! | AAATATCAATTTTTTGCGTG+TGG | - | chr3_1:76522481-76522500 | Msa0376420:CDS | 25.0% |
| !! | ATTATGAAGAGACTTTGAAA+TGG | - | chr3_1:76522586-76522605 | Msa0376420:CDS | 25.0% |
| !!! | TTATGAAGAGACTTTGAAAT+GGG | - | chr3_1:76522587-76522606 | Msa0376420:CDS | 25.0% |
| !!! | AAAGACTTTTTGGGATAATA+TGG | + | chr3_1:76522647-76522666 | None:intergenic | 25.0% |
| ! | AGACACATATCAATTTAAAC+TGG | + | chr3_1:76522728-76522747 | None:intergenic | 25.0% |
| !!! | AATGTAAAGTGATTTTGGTT+TGG | + | chr3_1:76523006-76523025 | None:intergenic | 25.0% |
| !! | AGTTGAATGTAAAGTGATTT+TGG | + | chr3_1:76523011-76523030 | None:intergenic | 25.0% |
| ! | ATGAATAATTCATCTACCAT+TGG | + | chr3_1:76523186-76523205 | None:intergenic | 25.0% |
| ! | ATGAATGTTATTAATACGGT+AGG | - | chr3_1:76523274-76523293 | Msa0376420:intron | 25.0% |
| ! | TAAGAAATCAAACTATCATC+TGG | + | chr3_1:76523557-76523576 | None:intergenic | 25.0% |
| !!! | TACTGTCTTCTGTTTTTATT+CGG | - | chr3_1:76523883-76523902 | Msa0376420:CDS | 25.0% |
| ! | ATTTGTAATTAAAGTCTGGT+AGG | - | chr3_1:76523949-76523968 | Msa0376420:CDS | 25.0% |
| ! | ATTGAAAAGGGATAAAAAAC+CGG | + | chr3_1:76524040-76524059 | None:intergenic | 25.0% |
| !!! | TCTTATACTCAAGTTTGTTA+TGG | - | chr3_1:76524596-76524615 | Msa0376420:CDS | 25.0% |
| ! | ATATAAAGTATGTATACGTC+GGG | + | chr3_1:76525026-76525045 | None:intergenic | 25.0% |
| ! | GATATAAAGTATGTATACGT+CGG | + | chr3_1:76525027-76525046 | None:intergenic | 25.0% |
| !!! | TCAAAAGTTTCAAAAGTGTT+TGG | - | chr3_1:76525073-76525092 | Msa0376420:intron | 25.0% |
| ! | CAAACTTAATGAAATTTAGC+AGG | + | chr3_1:76525107-76525126 | None:intergenic | 25.0% |
| ! | CTGCTAAATTTCATTAAGTT+TGG | - | chr3_1:76525105-76525124 | Msa0376420:intron | 25.0% |
| ! | TAGAATTTATTCAACAAGGA+TGG | + | chr3_1:76525136-76525155 | None:intergenic | 25.0% |
| ! | ATCCTTGTTGAATAAATTCT+AGG | - | chr3_1:76525135-76525154 | Msa0376420:intron | 25.0% |
| ! | TCCTTGTTGAATAAATTCTA+GGG | - | chr3_1:76525136-76525155 | Msa0376420:intron | 25.0% |
| ! | CAATCTTTAGTAGTATTCTA+TGG | - | chr3_1:76525160-76525179 | Msa0376420:intron | 25.0% |
| ! | AAACATAGAAAAACTGTCAT+TGG | + | chr3_1:76525279-76525298 | None:intergenic | 25.0% |
| ! | ATTATTTACTCTATGATTGC+TGG | - | chr3_1:76525526-76525545 | Msa0376420:intron | 25.0% |
| !! | GTTTTGTGAATATTTTACCT+AGG | - | chr3_1:76525548-76525567 | Msa0376420:intron | 25.0% |
| !!! | TGTTTATGATTGATTTGTAC+CGG | - | chr3_1:76525921-76525940 | Msa0376420:intron | 25.0% |
| ! | GAAATTGATACAAAACAATG+TGG | + | chr3_1:76525954-76525973 | None:intergenic | 25.0% |
| ! | ATAACTATGAATCTGATGTT+AGG | - | chr3_1:76526003-76526022 | Msa0376420:intron | 25.0% |
| ! | ATAAATGAATACAAAACCTG+GGG | + | chr3_1:76526044-76526063 | None:intergenic | 25.0% |
| ! | GAATAAATGAATACAAAACC+TGG | + | chr3_1:76526046-76526065 | None:intergenic | 25.0% |
| ! | TATATCTGTCCTCTATTTAA+AGG | - | chr3_1:76526085-76526104 | Msa0376420:intron | 25.0% |
| !!! | GTTTTGACATTCATTTACAA+AGG | - | chr3_1:76526131-76526150 | Msa0376420:intron | 25.0% |
| ! | GTTAAAATAGGAAAGTAATG+AGG | + | chr3_1:76526667-76526686 | None:intergenic | 25.0% |
| !! | ACATGTAATTTTCTGATTTC+AGG | - | chr3_1:76526731-76526750 | Msa0376420:intron | 25.0% |
| ! | AATATTTGGCAAGAGTTAAT+TGG | - | chr3_1:76527024-76527043 | Msa0376420:intron | 25.0% |
| !!! | ACATTAATCATGGTTTTGTA+AGG | + | chr3_1:76527743-76527762 | None:intergenic | 25.0% |
| ! | TTTACTTAGATGTGGTTAAA+TGG | - | chr3_1:76528025-76528044 | Msa0376420:CDS | 25.0% |
| ! | TTACTTAGATGTGGTTAAAT+GGG | - | chr3_1:76528026-76528045 | Msa0376420:CDS | 25.0% |
| ! | TTTATACATGGAAAATGTTC+AGG | - | chr3_1:76528116-76528135 | Msa0376420:CDS | 25.0% |
| ! | AAATGGAAATATCAAATGCA+GGG | + | chr3_1:76528177-76528196 | None:intergenic | 25.0% |
| ! | ACAATCATTGAGTATACAAA+TGG | + | chr3_1:76528194-76528213 | None:intergenic | 25.0% |
| ! | TATACTCAATGATTGTTGAA+CGG | - | chr3_1:76528198-76528217 | Msa0376420:CDS | 25.0% |
| ! | CAAAACTTAACGTAAAAGAT+GGG | + | chr3_1:76528254-76528273 | None:intergenic | 25.0% |
| ! | ACAAAACTTAACGTAAAAGA+TGG | + | chr3_1:76528255-76528274 | None:intergenic | 25.0% |
| !!! | AAGTTTTGTTTCACTTTTGA+AGG | - | chr3_1:76528266-76528285 | Msa0376420:five_prime_UTR | 25.0% |
| ! | ACATTCATGTAAAAGTGAAT+TGG | + | chr3_1:76528426-76528445 | None:intergenic | 25.0% |
| !! | TTGATGAGAATGTACATTTT+CGG | - | chr3_1:76528978-76528997 | Msa0376420:intron | 25.0% |
| ! | TAAAAGAACTTAAACTACAC+TGG | + | chr3_1:76529201-76529220 | None:intergenic | 25.0% |
| ! | GACTAATAAAATGTGATGAT+CGG | + | chr3_1:76529335-76529354 | None:intergenic | 25.0% |
| !!! | ACATTTTATTAGTCTTCACA+TGG | - | chr3_1:76529341-76529360 | Msa0376420:five_prime_UTR | 25.0% |
| !! | TAGTACTTCTATTTTATTGC+TGG | - | chr3_1:76529425-76529444 | Msa0376420:five_prime_UTR | 25.0% |
| CAAGTTATTTATTCAGTTGG+TGG | + | chr3_1:76522235-76522254 | None:intergenic | 30.0% | |
| AGATTACAGACATGTTGAAT+TGG | + | chr3_1:76522305-76522324 | None:intergenic | 30.0% | |
| TTCCATAAACTGTTTACGAT+TGG | - | chr3_1:76522511-76522530 | Msa0376420:CDS | 30.0% | |
| ATCCAATCGTAAACAGTTTA+TGG | + | chr3_1:76522516-76522535 | None:intergenic | 30.0% | |
| TATGTGTCTGTCAATATCAA+AGG | - | chr3_1:76522739-76522758 | Msa0376420:CDS | 30.0% | |
| ATGTGTCTGTCAATATCAAA+GGG | - | chr3_1:76522740-76522759 | Msa0376420:CDS | 30.0% | |
| !!! | AAGGGAACTTTTTAGCTTTT+TGG | - | chr3_1:76522758-76522777 | Msa0376420:CDS | 30.0% |
| !!! | AGGGAACTTTTTAGCTTTTT+GGG | - | chr3_1:76522759-76522778 | Msa0376420:CDS | 30.0% |
| !!! | CAATTTTGCTATTCTAGAAG+TGG | + | chr3_1:76522838-76522857 | None:intergenic | 30.0% |
| !!! | TTAGTGTATGTTTGGTTTTG+GGG | + | chr3_1:76523089-76523108 | None:intergenic | 30.0% |
| !!! | CTTAGTGTATGTTTGGTTTT+GGG | + | chr3_1:76523090-76523109 | None:intergenic | 30.0% |
| !! | ACTTAGTGTATGTTTGGTTT+TGG | + | chr3_1:76523091-76523110 | None:intergenic | 30.0% |
| GACTTAAATGTGTTTGTAAG+AGG | + | chr3_1:76523159-76523178 | None:intergenic | 30.0% | |
| CTTACAAACACATTTAAGTC+AGG | - | chr3_1:76523159-76523178 | Msa0376420:intron | 30.0% | |
| !! | ATTGCAGTTCAGTTTTATAC+CGG | - | chr3_1:76523333-76523352 | Msa0376420:intron | 30.0% |
| !! | ATTAGTTGATGAATGAGAAG+AGG | - | chr3_1:76523378-76523397 | Msa0376420:intron | 30.0% |
| GGACTAAAACTTATTGAAGT+TGG | + | chr3_1:76523536-76523555 | None:intergenic | 30.0% | |
| TGATGAGAGTAATATTTCTC+CGG | - | chr3_1:76523676-76523695 | Msa0376420:intron | 30.0% | |
| GCACATTTGTAATTAAAGTC+TGG | - | chr3_1:76523945-76523964 | Msa0376420:CDS | 30.0% | |
| TTGAAAAGGGATAAAAAACC+GGG | + | chr3_1:76524039-76524058 | None:intergenic | 30.0% | |
| TGGCATTTATAAATCAGGTT+GGG | + | chr3_1:76524397-76524416 | None:intergenic | 30.0% | |
| ATGGCATTTATAAATCAGGT+TGG | + | chr3_1:76524398-76524417 | None:intergenic | 30.0% | |
| AACCTGATTTATAAATGCCA+TGG | - | chr3_1:76524397-76524416 | Msa0376420:CDS | 30.0% | |
| ATACAAAAAGGCAAGCATTA+TGG | + | chr3_1:76524558-76524577 | None:intergenic | 30.0% | |
| ATGGACATAAATCTGTTTGT+GGG | + | chr3_1:76524634-76524653 | None:intergenic | 30.0% | |
| ! | TTTTCGAATGGGAAATATCA+TGG | + | chr3_1:76524653-76524672 | None:intergenic | 30.0% |
| ATTAACAACTAACCAACTAC+TGG | + | chr3_1:76524846-76524865 | None:intergenic | 30.0% | |
| AAAATACACGTTAGCTACAA+AGG | + | chr3_1:76524949-76524968 | None:intergenic | 30.0% | |
| ACCCTAGAATTTATTCAACA+AGG | + | chr3_1:76525140-76525159 | None:intergenic | 30.0% | |
| ATAGAAAAACTGTCATTGGA+TGG | + | chr3_1:76525275-76525294 | None:intergenic | 30.0% | |
| TATCACCTGTGCTATATATT+CGG | + | chr3_1:76525369-76525388 | None:intergenic | 30.0% | |
| ! | TTTTCCCAATCAAAAGTAGA+AGG | + | chr3_1:76525476-76525495 | None:intergenic | 30.0% |
| ! | TAACAGTTTTTGTCTTGTGA+TGG | - | chr3_1:76525754-76525773 | Msa0376420:intron | 30.0% |
| AAGATAGAAAACGAGAGAAA+GGG | + | chr3_1:76525827-76525846 | None:intergenic | 30.0% | |
| !! | GTTTATGATTGATTTGTACC+GGG | - | chr3_1:76525922-76525941 | Msa0376420:intron | 30.0% |
| TTGATACAAAACAATGTGGA+TGG | + | chr3_1:76525950-76525969 | None:intergenic | 30.0% | |
| TAAATGAATACAAAACCTGG+GGG | + | chr3_1:76526043-76526062 | None:intergenic | 30.0% | |
| !! | ACTTTGATGATGTCATTTAC+AGG | - | chr3_1:76526538-76526557 | Msa0376420:intron | 30.0% |
| ! | TGTAATTTTCTGATTTCAGG+AGG | - | chr3_1:76526734-76526753 | Msa0376420:intron | 30.0% |
| TTGATATTAGAACAGGACAA+AGG | - | chr3_1:76527114-76527133 | Msa0376420:intron | 30.0% | |
| ! | TGTTTCACACCTTTTGATAA+AGG | - | chr3_1:76527185-76527204 | Msa0376420:intron | 30.0% |
| ! | TTGGTAACTCCTTTATCAAA+AGG | + | chr3_1:76527197-76527216 | None:intergenic | 30.0% |
| CTCTATATTCATGATGCAAA+CGG | - | chr3_1:76527266-76527285 | Msa0376420:intron | 30.0% | |
| TCTATATTCATGATGCAAAC+GGG | - | chr3_1:76527267-76527286 | Msa0376420:intron | 30.0% | |
| AGTGAAATATATTAGACCTG+TGG | + | chr3_1:76527357-76527376 | None:intergenic | 30.0% | |
| ACAGGTCTAATATATTTCAC+TGG | - | chr3_1:76527356-76527375 | Msa0376420:intron | 30.0% | |
| CAGGTCTAATATATTTCACT+GGG | - | chr3_1:76527357-76527376 | Msa0376420:intron | 30.0% | |
| AAGTTTAGCACAGTATAAGT+TGG | + | chr3_1:76527405-76527424 | None:intergenic | 30.0% | |
| ! | TGTGCTAAACTTTTCATTGA+TGG | - | chr3_1:76527413-76527432 | Msa0376420:intron | 30.0% |
| !!! | AGCTTTTTGGATTTTGGAAT+TGG | + | chr3_1:76527620-76527639 | None:intergenic | 30.0% |
| !!! | TTAATCATGGTTTTGTAAGG+TGG | + | chr3_1:76527740-76527759 | None:intergenic | 30.0% |
| ACCATGATTAATGTTTATGG+TGG | - | chr3_1:76527749-76527768 | Msa0376420:intron | 30.0% | |
| ACCACCATAAACATTAATCA+TGG | + | chr3_1:76527753-76527772 | None:intergenic | 30.0% | |
| !! | GAAATAAAGGCATCTTAGTT+TGG | - | chr3_1:76527837-76527856 | Msa0376420:CDS | 30.0% |
| GATAAAACACATACATGTGT+TGG | - | chr3_1:76527959-76527978 | Msa0376420:CDS | 30.0% | |
| GTTGCACAAATTCAATGTAT+TGG | + | chr3_1:76527992-76528011 | None:intergenic | 30.0% | |
| CTAAGTAAACCAAGGTTTAA+AGG | + | chr3_1:76528014-76528033 | None:intergenic | 30.0% | |
| ! | CTAAAGTATTTGCTCAAAGA+CGG | - | chr3_1:76528052-76528071 | Msa0376420:CDS | 30.0% |
| GCAAAACCCATATTTATACA+TGG | - | chr3_1:76528104-76528123 | Msa0376420:CDS | 30.0% | |
| AAACAAATTCTGTCACTGTT+AGG | + | chr3_1:76528142-76528161 | None:intergenic | 30.0% | |
| AATGGAAATATCAAATGCAG+GGG | + | chr3_1:76528176-76528195 | None:intergenic | 30.0% | |
| CAAATGGAAATATCAAATGC+AGG | + | chr3_1:76528178-76528197 | None:intergenic | 30.0% | |
| GACAAGAACCTATGAATTTA+AGG | + | chr3_1:76528232-76528251 | None:intergenic | 30.0% | |
| !! | TTTTGTTTCACTTTTGAAGG+AGG | - | chr3_1:76528269-76528288 | Msa0376420:intron | 30.0% |
| AGGAGGCAAAATTTATTCTA+AGG | - | chr3_1:76528286-76528305 | Msa0376420:intron | 30.0% | |
| GGAGGCAAAATTTATTCTAA+GGG | - | chr3_1:76528287-76528306 | Msa0376420:intron | 30.0% | |
| !! | CAAAATCACTGTTTGATTTG+CGG | + | chr3_1:76528529-76528548 | None:intergenic | 30.0% |
| GAAATCTGGATATCTTGAAA+GGG | + | chr3_1:76528786-76528805 | None:intergenic | 30.0% | |
| AGAAATCTGGATATCTTGAA+AGG | + | chr3_1:76528787-76528806 | None:intergenic | 30.0% | |
| ATTCTACACAGAGAAATACA+TGG | - | chr3_1:76528859-76528878 | Msa0376420:intron | 30.0% | |
| TTCTACACAGAGAAATACAT+GGG | - | chr3_1:76528860-76528879 | Msa0376420:intron | 30.0% | |
| TTGCCATCTGAAAATAAATC+AGG | - | chr3_1:76528884-76528903 | Msa0376420:intron | 30.0% | |
| TGCCATCTGAAAATAAATCA+GGG | - | chr3_1:76528885-76528904 | Msa0376420:intron | 30.0% | |
| !! | TACCCTGATTTATTTTCAGA+TGG | + | chr3_1:76528890-76528909 | None:intergenic | 30.0% |
| ATATAGCGATCGAGTTTATA+TGG | - | chr3_1:76529090-76529109 | Msa0376420:intron | 30.0% | |
| CTAATCAGTTATGAGACAAT+TGG | + | chr3_1:76529244-76529263 | None:intergenic | 30.0% | |
| ! | GGCTTTTCATTTCATTATAC+AGG | - | chr3_1:76529294-76529313 | Msa0376420:intron | 30.0% |
| GCTTCTCTTCATTTAATGAT+TGG | - | chr3_1:76529447-76529466 | Msa0376420:five_prime_UTR | 30.0% | |
| TATACTAACCTTCGATTCAT+AGG | + | chr3_1:76529482-76529501 | None:intergenic | 30.0% | |
| AATCGAAGGTTAGTATAACT+AGG | - | chr3_1:76529485-76529504 | Msa0376420:five_prime_UTR | 30.0% | |
| AAGGTTAGTATAACTAGGAT+TGG | - | chr3_1:76529490-76529509 | Msa0376420:five_prime_UTR | 30.0% | |
| TTGGATTGTCTTCAAGTGAA+AGG | + | chr3_1:76522286-76522305 | None:intergenic | 35.0% | |
| GTCTAATTAACCACTGCAAT+CGG | + | chr3_1:76522539-76522558 | None:intergenic | 35.0% | |
| !!! | AGAGACTTTGAAATGGGTTT+TGG | - | chr3_1:76522593-76522612 | Msa0376420:CDS | 35.0% |
| !!! | GAGACTTTGAAATGGGTTTT+GGG | - | chr3_1:76522594-76522613 | Msa0376420:CDS | 35.0% |
| !!! | AGACTTTGAAATGGGTTTTG+GGG | - | chr3_1:76522595-76522614 | Msa0376420:CDS | 35.0% |
| !!! | TACTTTTTTGTGGCATGAAC+TGG | - | chr3_1:76522618-76522637 | Msa0376420:CDS | 35.0% |
| GTTTGTAAGAGGCAACTTAT+AGG | + | chr3_1:76523148-76523167 | None:intergenic | 35.0% | |
| TTTCTCCGGAAGAAAAATTG+AGG | - | chr3_1:76523690-76523709 | Msa0376420:intron | 35.0% | |
| TGAAAAGGGATAAAAAACCG+GGG | + | chr3_1:76524038-76524057 | None:intergenic | 35.0% | |
| GTTAACACTTGGTATGTACT+AGG | + | chr3_1:76524123-76524142 | None:intergenic | 35.0% | |
| TACATACCAAGTGTTAACGA+TGG | - | chr3_1:76524125-76524144 | Msa0376420:CDS | 35.0% | |
| ATTGAACCATCGTTAACACT+TGG | + | chr3_1:76524134-76524153 | None:intergenic | 35.0% | |
| AAATGAAATCAATTGCCAGC+TGG | + | chr3_1:76524272-76524291 | None:intergenic | 35.0% | |
| !! | TTATAAATCAGGTTGGGCTT+AGG | + | chr3_1:76524391-76524410 | None:intergenic | 35.0% |
| TGCCATGGCATTTATAAATC+AGG | + | chr3_1:76524402-76524421 | None:intergenic | 35.0% | |
| CATGGACATAAATCTGTTTG+TGG | + | chr3_1:76524635-76524654 | None:intergenic | 35.0% | |
| TTAGCTACAAAGGCTACATT+TGG | + | chr3_1:76524939-76524958 | None:intergenic | 35.0% | |
| CTCGACTGTGTTAATTCATT+TGG | - | chr3_1:76525219-76525238 | Msa0376420:intron | 35.0% | |
| ! | CTTTTAGATAGTCTCGTTTC+TGG | - | chr3_1:76525301-76525320 | Msa0376420:intron | 35.0% |
| ATTTGTGTATTGCAGACTCA+CGG | - | chr3_1:76525338-76525357 | Msa0376420:intron | 35.0% | |
| !! | TCCTTCCTTCTACTTTTGAT+TGG | - | chr3_1:76525468-76525487 | Msa0376420:intron | 35.0% |
| !! | CCTTCCTTCTACTTTTGATT+GGG | - | chr3_1:76525469-76525488 | Msa0376420:intron | 35.0% |
| ! | ATTTTGTATGCGATCCAACT+CGG | + | chr3_1:76525654-76525673 | None:intergenic | 35.0% |
| AGTTGGATCGCATACAAAAT+CGG | - | chr3_1:76525654-76525673 | Msa0376420:intron | 35.0% | |
| GAAGATAGAAAACGAGAGAA+AGG | + | chr3_1:76525828-76525847 | None:intergenic | 35.0% | |
| ! | ATGACATATCCTGATTCGAA+AGG | - | chr3_1:76525859-76525878 | Msa0376420:intron | 35.0% |
| ! | TGACATATCCTGATTCGAAA+GGG | - | chr3_1:76525860-76525879 | Msa0376420:intron | 35.0% |
| AAAAAAGACCCTTTCGAATC+AGG | + | chr3_1:76525871-76525890 | None:intergenic | 35.0% | |
| ATTTACAAAGGCAAAGCATG+CGG | - | chr3_1:76526143-76526162 | Msa0376420:intron | 35.0% | |
| AAAGACACAAACCATTCACA+GGG | + | chr3_1:76526709-76526728 | None:intergenic | 35.0% | |
| AAAAGACACAAACCATTCAC+AGG | + | chr3_1:76526710-76526729 | None:intergenic | 35.0% | |
| ! | TGGTGCATAATTCTGAAAAG+CGG | + | chr3_1:76526840-76526859 | None:intergenic | 35.0% |
| ! | CTTTTCAGAATTATGCACCA+AGG | - | chr3_1:76526840-76526859 | Msa0376420:CDS | 35.0% |
| AGACAACGAGGATGAATATT+TGG | - | chr3_1:76527010-76527029 | Msa0376420:intron | 35.0% | |
| AGGACAAAGGAGAGATATAT+TGG | - | chr3_1:76527127-76527146 | Msa0376420:intron | 35.0% | |
| TGGTAGAAGAGAACAAAACT+TGG | - | chr3_1:76527147-76527166 | Msa0376420:intron | 35.0% | |
| ! | AAAGGAGTTACCAAGTTTTC+AGG | - | chr3_1:76527203-76527222 | Msa0376420:intron | 35.0% |
| GATAAATCCACCTGAAAACT+TGG | + | chr3_1:76527216-76527235 | None:intergenic | 35.0% | |
| !!! | AGTTTTCAGGTGGATTTATC+TGG | - | chr3_1:76527216-76527235 | Msa0376420:intron | 35.0% |
| !!! | GTTTTCAGGTGGATTTATCT+GGG | - | chr3_1:76527217-76527236 | Msa0376420:intron | 35.0% |
| ! | CAGTATAAGTTGGATTCAAG+AGG | + | chr3_1:76527395-76527414 | None:intergenic | 35.0% |
| AACGAACATAGTAATACCCT+AGG | + | chr3_1:76527554-76527573 | None:intergenic | 35.0% | |
| GGTATTACTATGTTCGTTAG+AGG | - | chr3_1:76527556-76527575 | Msa0376420:intron | 35.0% | |
| TTACTATGTTCGTTAGAGGA+TGG | - | chr3_1:76527560-76527579 | Msa0376420:intron | 35.0% | |
| ! | AGGTGAAGCTTTTTGGATTT+TGG | + | chr3_1:76527626-76527645 | None:intergenic | 35.0% |
| TGTATTTCAACAATCTCTGG+AGG | + | chr3_1:76527653-76527672 | None:intergenic | 35.0% | |
| GACTGTATTTCAACAATCTC+TGG | + | chr3_1:76527656-76527675 | None:intergenic | 35.0% | |
| GCGCAATACTTGAGAAATAA+AGG | - | chr3_1:76527824-76527843 | Msa0376420:CDS | 35.0% | |
| !! | TAAAGGCATCTTAGTTTGGA+AGG | - | chr3_1:76527841-76527860 | Msa0376420:CDS | 35.0% |
| TTTGTGCAACCTTTAAACCT+TGG | - | chr3_1:76528002-76528021 | Msa0376420:CDS | 35.0% | |
| AACCTTGGTTTACTTAGATG+TGG | - | chr3_1:76528017-76528036 | Msa0376420:CDS | 35.0% | |
| AACCACATCTAAGTAAACCA+AGG | + | chr3_1:76528022-76528041 | None:intergenic | 35.0% | |
| CTCTGATGCCTTAAATTCAT+AGG | - | chr3_1:76528221-76528240 | Msa0376420:exon | 35.0% | |
| ! | GGCTATTTAAAGCACAAACT+TGG | - | chr3_1:76528641-76528660 | Msa0376420:intron | 35.0% |
| ! | AAAAATGGGCTTGCAGAATT+TGG | - | chr3_1:76528710-76528729 | Msa0376420:intron | 35.0% |
| TTGCAGAATTTGGTCACATT+GGG | - | chr3_1:76528720-76528739 | Msa0376420:intron | 35.0% | |
| ATAGCACACTTGAAGAAATC+TGG | + | chr3_1:76528800-76528819 | None:intergenic | 35.0% | |
| ATCGAGTTTATATGGAAGAG+AGG | - | chr3_1:76529098-76529117 | Msa0376420:intron | 35.0% | |
| TTTATATGGAAGAGAGGATG+TGG | - | chr3_1:76529104-76529123 | Msa0376420:intron | 35.0% | |
| TTATATGGAAGAGAGGATGT+GGG | - | chr3_1:76529105-76529124 | Msa0376420:intron | 35.0% | |
| ! | GCTACTTTACTCAAGATAAC+TGG | - | chr3_1:76529263-76529282 | Msa0376420:intron | 35.0% |
| ATGAAATGAAAAGCCCCAAA+TGG | + | chr3_1:76529289-76529308 | None:intergenic | 35.0% | |
| TGAAATCTAACCTGAGTTCG+TGG | + | chr3_1:76522432-76522451 | None:intergenic | 40.0% | |
| !!! | GGTTTTGGGGTACTTTTTTG+TGG | - | chr3_1:76522608-76522627 | Msa0376420:CDS | 40.0% |
| CACATTTAAGTCAGGTCCAA+TGG | - | chr3_1:76523167-76523186 | Msa0376420:intron | 40.0% | |
| !! | ACAGGCATTTTGAAAGGAAG+TGG | + | chr3_1:76523422-76523441 | None:intergenic | 40.0% |
| ! | TCTGTCACAGGCATTTTGAA+AGG | + | chr3_1:76523428-76523447 | None:intergenic | 40.0% |
| ACATCATTGAAGTCTGTCAC+AGG | + | chr3_1:76523440-76523459 | None:intergenic | 40.0% | |
| GATGTGCAAAATCTTGACGA+CGG | - | chr3_1:76523455-76523474 | Msa0376420:intron | 40.0% | |
| TATTGCGCAATCTCTTCAAC+CGG | + | chr3_1:76523491-76523510 | None:intergenic | 40.0% | |
| !! | GAAGTTGGTGATACATATCC+CGG | + | chr3_1:76523521-76523540 | None:intergenic | 40.0% |
| TCCGGAAGAAAAATTGAGGA+GGG | - | chr3_1:76523694-76523713 | Msa0376420:intron | 40.0% | |
| ! | TCCCTCCTCAATTTTTCTTC+CGG | + | chr3_1:76523698-76523717 | None:intergenic | 40.0% |
| AAGAAAAATTGAGGAGGGAG+AGG | - | chr3_1:76523699-76523718 | Msa0376420:intron | 40.0% | |
| CTCTGCACCTCATTAAAAAG+AGG | - | chr3_1:76524222-76524241 | Msa0376420:CDS | 40.0% | |
| TGCACCTCATTAAAAAGAGG+AGG | - | chr3_1:76524225-76524244 | Msa0376420:CDS | 40.0% | |
| GCACCTCATTAAAAAGAGGA+GGG | - | chr3_1:76524226-76524245 | Msa0376420:CDS | 40.0% | |
| ! | AGTCCCTCCTCTTTTTAATG+AGG | + | chr3_1:76524232-76524251 | None:intergenic | 40.0% |
| AAAAACTACTGTAGCTGCCA+TGG | + | chr3_1:76524417-76524436 | None:intergenic | 40.0% | |
| CTCTTACAGTAGTATCACAG+TGG | + | chr3_1:76524476-76524495 | None:intergenic | 40.0% | |
| ! | CTTGAGCTCTGTTTTCGAAT+GGG | + | chr3_1:76524664-76524683 | None:intergenic | 40.0% |
| GACAGATGAGGGTCAATAAT+GGG | + | chr3_1:76524708-76524727 | None:intergenic | 40.0% | |
| AGACAGATGAGGGTCAATAA+TGG | + | chr3_1:76524709-76524728 | None:intergenic | 40.0% | |
| TAAGCAAGCATAGATCCATC+TGG | + | chr3_1:76524732-76524751 | None:intergenic | 40.0% | |
| AAGGCTACATTTGGTTGTCA+GGG | + | chr3_1:76524930-76524949 | None:intergenic | 40.0% | |
| AAAGGCTACATTTGGTTGTC+AGG | + | chr3_1:76524931-76524950 | None:intergenic | 40.0% | |
| ATGGTCTGTTTGATGTGTTG+TGG | - | chr3_1:76524988-76525007 | Msa0376420:intron | 40.0% | |
| TTTGTGTATTGCAGACTCAC+GGG | - | chr3_1:76525339-76525358 | Msa0376420:intron | 40.0% | |
| CCCAATCAAAAGTAGAAGGA+AGG | + | chr3_1:76525472-76525491 | None:intergenic | 40.0% | |
| !! | ACCTAGGTTTTGTAGTACCA+AGG | - | chr3_1:76525564-76525583 | Msa0376420:intron | 40.0% |
| TCGCATACAAAATCGGATTC+TGG | - | chr3_1:76525661-76525680 | Msa0376420:intron | 40.0% | |
| AAATCGGATTCTGGTGAGAT+CGG | - | chr3_1:76525670-76525689 | Msa0376420:intron | 40.0% | |
| AGGATATGTCATCACTGAGA+GGG | + | chr3_1:76525851-76525870 | None:intergenic | 40.0% | |
| !!! | ATTTTTTGCAGCCCTGTGAA+TGG | - | chr3_1:76526695-76526714 | Msa0376420:intron | 40.0% |
| TTTCTGATTTCAGGAGGAGA+TGG | - | chr3_1:76526740-76526759 | Msa0376420:intron | 40.0% | |
| TGGATAGGAAAACTGGATAC+TGG | - | chr3_1:76526760-76526779 | Msa0376420:intron | 40.0% | |
| ATAGGAAAACTGGATACTGG+TGG | - | chr3_1:76526763-76526782 | Msa0376420:intron | 40.0% | |
| TCAAATGCTAAAATGCGCCT+AGG | - | chr3_1:76526921-76526940 | Msa0376420:CDS | 40.0% | |
| CAAATGCTAAAATGCGCCTA+GGG | - | chr3_1:76526922-76526941 | Msa0376420:CDS | 40.0% | |
| AAATGCTAAAATGCGCCTAG+GGG | - | chr3_1:76526923-76526942 | Msa0376420:CDS | 40.0% | |
| TGTGAAAGAACTAGACAACG+AGG | - | chr3_1:76526998-76527017 | Msa0376420:intron | 40.0% | |
| GCAAGAGTTAATTGGATGCA+TGG | - | chr3_1:76527032-76527051 | Msa0376420:intron | 40.0% | |
| TCACTGCTCAGATCATAAAC+AGG | - | chr3_1:76527063-76527082 | Msa0376420:intron | 40.0% | |
| ATCCATTCACCTTCAGTGAT+GGG | + | chr3_1:76527305-76527324 | None:intergenic | 40.0% | |
| GGATTCAAGAGGACTATCTA+AGG | + | chr3_1:76527384-76527403 | None:intergenic | 40.0% | |
| ATGTTCGCATGTGATGATCA+AGG | + | chr3_1:76527499-76527518 | None:intergenic | 40.0% | |
| GAACATAGTAATACCCTAGG+TGG | + | chr3_1:76527551-76527570 | None:intergenic | 40.0% | |
| ! | GGTATTTGCTGCTCATACAA+AGG | + | chr3_1:76527599-76527618 | None:intergenic | 40.0% |
| ATACAAGGTAGTACCATCGT+CGG | + | chr3_1:76527678-76527697 | None:intergenic | 40.0% | |
| CTTGTAAAGAGCTCCATACA+AGG | + | chr3_1:76527693-76527712 | None:intergenic | 40.0% | |
| AAGCCTGATGCTTCAAGATT+CGG | - | chr3_1:76527710-76527729 | Msa0376420:intron | 40.0% | |
| !!! | ATCATGGTTTTGTAAGGTGG+AGG | + | chr3_1:76527737-76527756 | None:intergenic | 40.0% |
| TTAGAAACGAGCTGTACACT+TGG | + | chr3_1:76527776-76527795 | None:intergenic | 40.0% | |
| TACAGCTCGTTTCTAACTCT+TGG | - | chr3_1:76527780-76527799 | Msa0376420:intron | 40.0% | |
| TAAAAGCAAGCAAGACAGAC+AGG | + | chr3_1:76527901-76527920 | None:intergenic | 40.0% | |
| ! | AACACATACATGTGTTGGCA+TGG | - | chr3_1:76527964-76527983 | Msa0376420:CDS | 40.0% |
| CTGTTGTCTAACTGTCAACA+AGG | + | chr3_1:76528590-76528609 | None:intergenic | 40.0% | |
| TGTTGACAGTTAGACAACAG+AGG | - | chr3_1:76528590-76528609 | Msa0376420:intron | 40.0% | |
| ACAACAGAGGAACTTCTAGA+CGG | - | chr3_1:76528603-76528622 | Msa0376420:intron | 40.0% | |
| GATGCTGATGATCAGTTTAC+TGG | - | chr3_1:76528671-76528690 | Msa0376420:intron | 40.0% | |
| ! | CAGAGTGGCTTGTCAAAAAT+GGG | - | chr3_1:76528696-76528715 | Msa0376420:intron | 40.0% |
| CTTGCAGAATTTGGTCACAT+TGG | - | chr3_1:76528719-76528738 | Msa0376420:intron | 40.0% | |
| ! | TTTGGTCACATTGGGTTGTA+CGG | - | chr3_1:76528728-76528747 | Msa0376420:intron | 40.0% |
| TTCTTCAAGTGTGCTATAGC+TGG | - | chr3_1:76528803-76528822 | Msa0376420:intron | 40.0% | |
| AAGGCTTATCAATGCACTTG+TGG | - | chr3_1:76529009-76529028 | Msa0376420:intron | 40.0% | |
| ACTCAAGATAACTGGCCATT+TGG | - | chr3_1:76529271-76529290 | Msa0376420:intron | 40.0% | |
| CTCAAGATAACTGGCCATTT+GGG | - | chr3_1:76529272-76529291 | Msa0376420:intron | 40.0% | |
| TCAAGATAACTGGCCATTTG+GGG | - | chr3_1:76529273-76529292 | Msa0376420:intron | 40.0% | |
| CAAGACTTCCTATGAATCGA+AGG | - | chr3_1:76529471-76529490 | Msa0376420:five_prime_UTR | 40.0% | |
| AATCTAACCTGAGTTCGTGG+TGG | + | chr3_1:76522429-76522448 | None:intergenic | 45.0% | |
| ! | TAATACGGTAGGCGTTGTCT+TGG | - | chr3_1:76523285-76523304 | Msa0376420:intron | 45.0% |
| ! | AATACGGTAGGCGTTGTCTT+GGG | - | chr3_1:76523286-76523305 | Msa0376420:intron | 45.0% |
| !! | GCAGTTCAGTTTTATACCGG+AGG | - | chr3_1:76523336-76523355 | Msa0376420:intron | 45.0% |
| TCGCATTACACAAACACCTC+CGG | + | chr3_1:76523355-76523374 | None:intergenic | 45.0% | |
| ! | GAAGTGGTTTTTGACGCTTC+GGG | + | chr3_1:76523406-76523425 | None:intergenic | 45.0% |
| ! | GGAAGTGGTTTTTGACGCTT+CGG | + | chr3_1:76523407-76523426 | None:intergenic | 45.0% |
| ATTGCGCAATCTCTTCAACC+GGG | + | chr3_1:76523490-76523509 | None:intergenic | 45.0% | |
| GATTGCGCAATATCCATTGC+CGG | - | chr3_1:76523499-76523518 | Msa0376420:intron | 45.0% | |
| ATTGCGCAATATCCATTGCC+GGG | - | chr3_1:76523500-76523519 | Msa0376420:intron | 45.0% | |
| !! | TTGTTATTTAGCCCGCCTGA+TGG | - | chr3_1:76523647-76523666 | Msa0376420:intron | 45.0% |
| CTCCGGAAGAAAAATTGAGG+AGG | - | chr3_1:76523693-76523712 | Msa0376420:intron | 45.0% | |
| GGGTGAAGACGAACTCAAAA+AGG | - | chr3_1:76523759-76523778 | Msa0376420:intron | 45.0% | |
| CTCAAAAAGGAAAGCAGTCC+TGG | - | chr3_1:76523772-76523791 | Msa0376420:CDS | 45.0% | |
| TAACTAACCCCAGCAGGTAA+CGG | + | chr3_1:76523800-76523819 | None:intergenic | 45.0% | |
| AGAAAGTAACTAACCCCAGC+AGG | + | chr3_1:76523806-76523825 | None:intergenic | 45.0% | |
| GGAGGTCATGGTGAGATTAA+TGG | + | chr3_1:76524017-76524036 | None:intergenic | 45.0% | |
| ATAAAAAACCGGGGAGGTCA+TGG | + | chr3_1:76524029-76524048 | None:intergenic | 45.0% | |
| AAAGGGATAAAAAACCGGGG+AGG | + | chr3_1:76524035-76524054 | None:intergenic | 45.0% | |
| ! | TTTTATCCCATCAGTGCCAC+TGG | - | chr3_1:76524433-76524452 | Msa0376420:CDS | 45.0% |
| ! | GCTTGAGCTCTGTTTTCGAA+TGG | + | chr3_1:76524665-76524684 | None:intergenic | 45.0% |
| ATCCATCTGGAGACAGATGA+GGG | + | chr3_1:76524719-76524738 | None:intergenic | 45.0% | |
| GAATCAAAGCAGTTGACCCA+TGG | - | chr3_1:76524795-76524814 | Msa0376420:CDS | 45.0% | |
| ACCCATGGTGCAAAGGAAAA+TGG | - | chr3_1:76524810-76524829 | Msa0376420:CDS | 45.0% | |
| !! | GCCATTTTCCTTTGCACCAT+GGG | + | chr3_1:76524814-76524833 | None:intergenic | 45.0% |
| !! | AGCCATTTTCCTTTGCACCA+TGG | + | chr3_1:76524815-76524834 | None:intergenic | 45.0% |
| ! | GGCTTTGTAAGTCCAGTAGT+TGG | - | chr3_1:76524831-76524850 | Msa0376420:CDS | 45.0% |
| AGGCTACATTTGGTTGTCAG+GGG | + | chr3_1:76524929-76524948 | None:intergenic | 45.0% | |
| GCTTGCCGAATATATAGCAC+AGG | - | chr3_1:76525361-76525380 | Msa0376420:intron | 45.0% | |
| GCCTTGGTACTACAAAACCT+AGG | + | chr3_1:76525568-76525587 | None:intergenic | 45.0% | |
| AAACGAGAGAAAGGGCAGAA+TGG | + | chr3_1:76525819-76525838 | None:intergenic | 45.0% | |
| GGATATGTCATCACTGAGAG+GGG | + | chr3_1:76525850-76525869 | None:intergenic | 45.0% | |
| CAGGATATGTCATCACTGAG+AGG | + | chr3_1:76525852-76525871 | None:intergenic | 45.0% | |
| AAAACAATGTGGATGGCACC+CGG | + | chr3_1:76525943-76525962 | None:intergenic | 45.0% | |
| GATGTTAGGAACACCGTACT+AGG | - | chr3_1:76526017-76526036 | Msa0376420:intron | 45.0% | |
| GATTTCAGGAGGAGATGGAT+AGG | - | chr3_1:76526745-76526764 | Msa0376420:intron | 45.0% | |
| GAGGAGATGGATAGGAAAAC+TGG | - | chr3_1:76526753-76526772 | Msa0376420:intron | 45.0% | |
| ! | GACCATCCTTATCCTTTTGC+AGG | - | chr3_1:76526894-76526913 | Msa0376420:CDS | 45.0% |
| CTCCTGCAAAAGGATAAGGA+TGG | + | chr3_1:76526899-76526918 | None:intergenic | 45.0% | |
| GAAGCTCCTGCAAAAGGATA+AGG | + | chr3_1:76526903-76526922 | None:intergenic | 45.0% | |
| ! | GCATTTGAAGCTCCTGCAAA+AGG | + | chr3_1:76526909-76526928 | None:intergenic | 45.0% |
| ACAGACAAGATCCATCCAAG+TGG | + | chr3_1:76526973-76526992 | None:intergenic | 45.0% | |
| ACTTGGATGGATCTTGTCTG+TGG | - | chr3_1:76526972-76526991 | Msa0376420:intron | 45.0% | |
| CTTGGATGGATCTTGTCTGT+GGG | - | chr3_1:76526973-76526992 | Msa0376420:intron | 45.0% | |
| TTGGATGGATCTTGTCTGTG+GGG | - | chr3_1:76526974-76526993 | Msa0376420:intron | 45.0% | |
| !! | GGAGTTACCAAGTTTTCAGG+TGG | - | chr3_1:76527206-76527225 | Msa0376420:intron | 45.0% |
| !! | ATCTGGGCTAGTGAGAAATC+AGG | - | chr3_1:76527233-76527252 | Msa0376420:intron | 45.0% |
| ! | GATGCAAACGGGACTTGTTT+AGG | - | chr3_1:76527278-76527297 | Msa0376420:intron | 45.0% |
| ! | TGTTTAGGACCCATCACTGA+AGG | - | chr3_1:76527293-76527312 | Msa0376420:intron | 45.0% |
| CATCCATTCACCTTCAGTGA+TGG | + | chr3_1:76527306-76527325 | None:intergenic | 45.0% | |
| CATCACTGAAGGTGAATGGA+TGG | - | chr3_1:76527304-76527323 | Msa0376420:intron | 45.0% | |
| ! | TGCCATGTGTTAGTCTGGTA+GGG | + | chr3_1:76527457-76527476 | None:intergenic | 45.0% |
| ! | TTGCCATGTGTTAGTCTGGT+AGG | + | chr3_1:76527458-76527477 | None:intergenic | 45.0% |
| TACCAGACTAACACATGGCA+AGG | - | chr3_1:76527457-76527476 | Msa0376420:intron | 45.0% | |
| ACCAGACTAACACATGGCAA+GGG | - | chr3_1:76527458-76527477 | Msa0376420:intron | 45.0% | |
| TACCCTAGGTGGACAACTAA+GGG | + | chr3_1:76527540-76527559 | None:intergenic | 45.0% | |
| ATACCCTAGGTGGACAACTA+AGG | + | chr3_1:76527541-76527560 | None:intergenic | 45.0% | |
| ! | AGGCTCAAGGTGAAGCTTTT+TGG | + | chr3_1:76527633-76527652 | None:intergenic | 45.0% |
| GTTGAAATACAGTCCGACGA+TGG | - | chr3_1:76527662-76527681 | Msa0376420:intron | 45.0% | |
| GACGATGGTACTACCTTGTA+TGG | - | chr3_1:76527677-76527696 | Msa0376420:intron | 45.0% | |
| ! | TTCTCAAGTATTGCGCTCTC+AGG | + | chr3_1:76527820-76527839 | None:intergenic | 45.0% |
| CAACAGAGGAACTTCTAGAC+GGG | - | chr3_1:76528604-76528623 | Msa0376420:intron | 45.0% | |
| AACAGAGGAACTTCTAGACG+GGG | - | chr3_1:76528605-76528624 | Msa0376420:intron | 45.0% | |
| ATCAGTTTACTGGAGCAGAG+TGG | - | chr3_1:76528681-76528700 | Msa0376420:intron | 45.0% | |
| ! | GCAGAGTGGCTTGTCAAAAA+TGG | - | chr3_1:76528695-76528714 | Msa0376420:intron | 45.0% |
| TATCCATCCCACGATGTAAC+GGG | + | chr3_1:76528833-76528852 | None:intergenic | 45.0% | |
| GTATCCATCCCACGATGTAA+CGG | + | chr3_1:76528834-76528853 | None:intergenic | 45.0% | |
| TGAACCATGTGCACAAGATG+AGG | - | chr3_1:76528927-76528946 | Msa0376420:intron | 45.0% | |
| GAACCATGTGCACAAGATGA+GGG | - | chr3_1:76528928-76528947 | Msa0376420:intron | 45.0% | |
| AACCATGTGCACAAGATGAG+GGG | - | chr3_1:76528929-76528948 | Msa0376420:intron | 45.0% | |
| ! | GGAAGGTTGTTGATTGTGCA+TGG | - | chr3_1:76528950-76528969 | Msa0376420:intron | 45.0% |
| ! | TACATTTTCGGCACACTGCA+AGG | - | chr3_1:76528990-76529009 | Msa0376420:intron | 45.0% |
| GCTTATCAATGCACTTGTGG+CGG | - | chr3_1:76529012-76529031 | Msa0376420:intron | 45.0% | |
| GGATGTGGGAATTCATTGAC+AGG | - | chr3_1:76529119-76529138 | Msa0376420:intron | 45.0% | |
| CGAGCTAAAAGCAATGAGAG+AGG | + | chr3_1:76529389-76529408 | None:intergenic | 45.0% | |
| !!! | CTCTCATTGCTTTTAGCTCG+TGG | - | chr3_1:76529389-76529408 | Msa0376420:five_prime_UTR | 45.0% |
| !! | ATAAATTGAATAAATAAATA+AGG | - | chr3_1:76522154-76522173 | Msa0376420:three_prime_UTR | 5.0% |
| !! | TAAATTGAATAAATAAATAA+GGG | - | chr3_1:76522155-76522174 | Msa0376420:three_prime_UTR | 5.0% |
| !! | AATAAATAAATAAATAAATC+AGG | + | chr3_1:76524351-76524370 | None:intergenic | 5.0% |
| !!! | ATATATATATATATTCATTT+TGG | - | chr3_1:76526627-76526646 | Msa0376420:intron | 5.0% |
| ACGATTGGATCCGATTGCAG+TGG | - | chr3_1:76522526-76522545 | Msa0376420:CDS | 50.0% | |
| ! | TGACGACGGCATTCTTTTCC+CGG | - | chr3_1:76523469-76523488 | Msa0376420:intron | 50.0% |
| GGTGATACATATCCCGGCAA+TGG | + | chr3_1:76523515-76523534 | None:intergenic | 50.0% | |
| TTATTTAGCCCGCCTGATGG+CGG | - | chr3_1:76523650-76523669 | Msa0376420:intron | 50.0% | |
| AATTGAGGAGGGAGAGGTTG+AGG | - | chr3_1:76523705-76523724 | Msa0376420:intron | 50.0% | |
| ATTGAGGAGGGAGAGGTTGA+GGG | - | chr3_1:76523706-76523725 | Msa0376420:intron | 50.0% | |
| TAGGAGTGACACGATACGAG+TGG | - | chr3_1:76523738-76523757 | Msa0376420:intron | 50.0% | |
| AGGAGTGACACGATACGAGT+GGG | - | chr3_1:76523739-76523758 | Msa0376420:intron | 50.0% | |
| TAATCTCACCATGACCTCCC+CGG | - | chr3_1:76524018-76524037 | Msa0376420:CDS | 50.0% | |
| !! | TCACTACCAGTGGCACTGAT+GGG | + | chr3_1:76524442-76524461 | None:intergenic | 50.0% |
| ACAAGCCTAGTCACTACCAG+TGG | + | chr3_1:76524452-76524471 | None:intergenic | 50.0% | |
| ATGGGCGAAGCTGGTATACT+AGG | + | chr3_1:76524690-76524709 | None:intergenic | 50.0% | |
| GATCCATCTGGAGACAGATG+AGG | + | chr3_1:76524720-76524739 | None:intergenic | 50.0% | |
| GTGATCTTGACAACACGCCT+TGG | + | chr3_1:76525584-76525603 | None:intergenic | 50.0% | |
| AACTGGATACTGGTGGTCAC+TGG | - | chr3_1:76526770-76526789 | Msa0376420:intron | 50.0% | |
| CACCAAGGTAGAAGCTCAGT+TGG | - | chr3_1:76526855-76526874 | Msa0376420:CDS | 50.0% | |
| TGCCAACTGAGCTTCTACCT+TGG | + | chr3_1:76526860-76526879 | None:intergenic | 50.0% | |
| AATGCGCCTAGGGGTTGTTT+CGG | - | chr3_1:76526932-76526951 | Msa0376420:CDS | 50.0% | |
| GACAAGATCCATCCAAGTGG+TGG | + | chr3_1:76526970-76526989 | None:intergenic | 50.0% | |
| TGGATGGATCTTGTCTGTGG+GGG | - | chr3_1:76526975-76526994 | Msa0376420:intron | 50.0% | |
| GACCCATCACTGAAGGTGAA+TGG | - | chr3_1:76527300-76527319 | Msa0376420:intron | 50.0% | |
| TGGATGGTTGAGCAAATCGC+CGG | - | chr3_1:76527320-76527339 | Msa0376420:intron | 50.0% | |
| ! | GCCATGTGTTAGTCTGGTAG+GGG | + | chr3_1:76527456-76527475 | None:intergenic | 50.0% |
| TCCCTTGCCATGTGTTAGTC+TGG | + | chr3_1:76527462-76527481 | None:intergenic | 50.0% | |
| ACTCCCTTAGTTGTCCACCT+AGG | - | chr3_1:76527534-76527553 | Msa0376420:intron | 50.0% | |
| CTCCCTTAGTTGTCCACCTA+GGG | - | chr3_1:76527535-76527554 | Msa0376420:intron | 50.0% | |
| ! | CAACAATCTCTGGAGGCTCA+AGG | + | chr3_1:76527646-76527665 | None:intergenic | 50.0% |
| ! | GGTCCGAATCTTGAAGCATC+AGG | + | chr3_1:76527716-76527735 | None:intergenic | 50.0% |
| AGCAAGCAAGACAGACAGGA+GGG | + | chr3_1:76527897-76527916 | None:intergenic | 50.0% | |
| AAGCAAGCAAGACAGACAGG+AGG | + | chr3_1:76527898-76527917 | None:intergenic | 50.0% | |
| ACAGAGGAACTTCTAGACGG+GGG | - | chr3_1:76528606-76528625 | Msa0376420:intron | 50.0% | |
| AGACGGGGGTTGAAGTTTGA+AGG | - | chr3_1:76528620-76528639 | Msa0376420:intron | 50.0% | |
| ! | GTCACATTGGGTTGTACGGT+TGG | - | chr3_1:76528732-76528751 | Msa0376420:intron | 50.0% |
| TTGTACGGTTGGAGCTATGG+CGG | - | chr3_1:76528743-76528762 | Msa0376420:intron | 50.0% | |
| TTCCCCTCATCTTGTGCACA+TGG | + | chr3_1:76528934-76528953 | None:intergenic | 50.0% | |
| ATGTGCACAAGATGAGGGGA+AGG | - | chr3_1:76528933-76528952 | Msa0376420:intron | 50.0% | |
| ! | CCTGAGTTCGTGGTGGAAGA+TGG | + | chr3_1:76522422-76522441 | None:intergenic | 55.0% |
| CCATCTTCCACCACGAACTC+AGG | - | chr3_1:76522419-76522438 | Msa0376420:three_prime_UTR | 55.0% | |
| TCATCAAGTCCGCCATCAGG+CGG | + | chr3_1:76523662-76523681 | None:intergenic | 55.0% | |
| CTCTCATCAAGTCCGCCATC+AGG | + | chr3_1:76523665-76523684 | None:intergenic | 55.0% | |
| AGGTTGAGGGAACGCGGTTT+AGG | - | chr3_1:76523719-76523738 | Msa0376420:intron | 55.0% | |
| CCAGCTGGTGTAGCAGTAAG+TGG | + | chr3_1:76524257-76524276 | None:intergenic | 55.0% | |
| CCACTTACTGCTACACCAGC+TGG | - | chr3_1:76524254-76524273 | Msa0376420:CDS | 55.0% | |
| ! | GTCACTACCAGTGGCACTGA+TGG | + | chr3_1:76524443-76524462 | None:intergenic | 55.0% |
| ! | CAGTGCCACTGGTAGTGACT+AGG | - | chr3_1:76524444-76524463 | Msa0376420:CDS | 55.0% |
| !! | GGGTCAATAATGGGCGAAGC+TGG | + | chr3_1:76524699-76524718 | None:intergenic | 55.0% |
| GACCCTCATCTGTCTCCAGA+TGG | - | chr3_1:76524714-76524733 | Msa0376420:CDS | 55.0% | |
| GCAGTTGACCCATGGTGCAA+AGG | - | chr3_1:76524803-76524822 | Msa0376420:CDS | 55.0% | |
| TGCGATCCAACTCGGACAGA+GGG | + | chr3_1:76525646-76525665 | None:intergenic | 55.0% | |
| ATGCGATCCAACTCGGACAG+AGG | + | chr3_1:76525647-76525666 | None:intergenic | 55.0% | |
| TCAGCTCCGTCACGTTGCTA+GGG | - | chr3_1:76525779-76525798 | Msa0376420:intron | 55.0% | |
| GTCACACCCTAGCAACGTGA+CGG | + | chr3_1:76525788-76525807 | None:intergenic | 55.0% | |
| CGAGAGAAAGGGCAGAATGG+AGG | + | chr3_1:76525816-76525835 | None:intergenic | 55.0% | |
| CAAAACCTGGGGGCCTAGTA+CGG | + | chr3_1:76526033-76526052 | None:intergenic | 55.0% | |
| CTCAGTTGGCACAGATGCAC+AGG | - | chr3_1:76526869-76526888 | Msa0376420:CDS | 55.0% | |
| CAGCTACCGAAACAACCCCT+AGG | + | chr3_1:76526941-76526960 | None:intergenic | 55.0% | |
| ! | CTAGGGGTTGTTTCGGTAGC+TGG | - | chr3_1:76526939-76526958 | Msa0376420:CDS | 55.0% |
| GCAAATCGCCGGTGTGAATG+AGG | - | chr3_1:76527331-76527350 | Msa0376420:intron | 55.0% | |
| ACCTGTGGCCTCATTCACAC+CGG | + | chr3_1:76527342-76527361 | None:intergenic | 55.0% | |
| AGTCTGGTAGGGGCTTGAAG+TGG | + | chr3_1:76527446-76527465 | None:intergenic | 55.0% | |
| GCCCCTACCAGACTAACACA+TGG | - | chr3_1:76527452-76527471 | Msa0376420:intron | 55.0% | |
| GGGTTGTACGGTTGGAGCTA+TGG | - | chr3_1:76528740-76528759 | Msa0376420:intron | 55.0% | |
| TGTACGGTTGGAGCTATGGC+GGG | - | chr3_1:76528744-76528763 | Msa0376420:intron | 55.0% | |
| TGGTGCACCCGTTACATCGT+GGG | - | chr3_1:76528823-76528842 | Msa0376420:intron | 55.0% | |
| ATCAATGCACTTGTGGCGGC+TGG | - | chr3_1:76529016-76529035 | Msa0376420:intron | 55.0% | |
| ACTCGATCGCTATATCGCCG+AGG | + | chr3_1:76529085-76529104 | None:intergenic | 55.0% | |
| CATCAAGTCCGCCATCAGGC+GGG | + | chr3_1:76523661-76523680 | None:intergenic | 60.0% | |
| AGGGAGAGGTTGAGGGAACG+CGG | - | chr3_1:76523713-76523732 | Msa0376420:intron | 60.0% | |
| !! | TCCTGGTGCCGTTACCTGCT+GGG | - | chr3_1:76523789-76523808 | Msa0376420:CDS | 60.0% |
| CTTTCCCCCTCTGTCCGAGT+TGG | - | chr3_1:76525637-76525656 | Msa0376420:intron | 60.0% | |
| CGATCCAACTCGGACAGAGG+GGG | + | chr3_1:76525644-76525663 | None:intergenic | 60.0% | |
| GCGATCCAACTCGGACAGAG+GGG | + | chr3_1:76525645-76525664 | None:intergenic | 60.0% | |
| CTCAGCTCCGTCACGTTGCT+AGG | - | chr3_1:76525778-76525797 | Msa0376420:intron | 60.0% | |
| ! | GGGGTTGTTTCGGTAGCTGG+AGG | - | chr3_1:76526942-76526961 | Msa0376420:CDS | 60.0% |
| TAGCTGGAGGCTCCACCACT+TGG | - | chr3_1:76526955-76526974 | Msa0376420:CDS | 60.0% | |
| TGGAGGCTCCACCACTTGGA+TGG | - | chr3_1:76526959-76526978 | Msa0376420:CDS | 60.0% | |
| CTGGTGCACCCGTTACATCG+TGG | - | chr3_1:76528822-76528841 | Msa0376420:intron | 60.0% | |
| GCACCCGTTACATCGTGGGA+TGG | - | chr3_1:76528827-76528846 | Msa0376420:intron | 60.0% | |
| GAGGCATGTGGCGCTCATCT+GGG | + | chr3_1:76529066-76529085 | None:intergenic | 60.0% | |
| CAGATGAGCGCCACATGCCT+CGG | - | chr3_1:76529065-76529084 | Msa0376420:intron | 60.0% | |
| CGCTATATCGCCGAGGCATG+TGG | + | chr3_1:76529078-76529097 | None:intergenic | 60.0% | |
| !! | GTCCTGGTGCCGTTACCTGC+TGG | - | chr3_1:76523788-76523807 | Msa0376420:CDS | 65.0% |
| !! | CCTGGTGCCGTTACCTGCTG+GGG | - | chr3_1:76523790-76523809 | Msa0376420:CDS | 65.0% |
| GAACACCGTACTAGGCCCCC+AGG | - | chr3_1:76526025-76526044 | Msa0376420:intron | 65.0% | |
| GCCGGTGTGAATGAGGCCAC+AGG | - | chr3_1:76527338-76527357 | Msa0376420:intron | 65.0% | |
| CGAGGCATGTGGCGCTCATC+TGG | + | chr3_1:76529067-76529086 | None:intergenic | 65.0% | |
| ! | CCCCAGCAGGTAACGGCACC+AGG | + | chr3_1:76523793-76523812 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 76522098 | 76529527 | 76522098 | ID=Msa0376420;Name=Msa0376420 |
| chr3_1 | mRNA | 76522098 | 76529527 | 76522098 | ID=Msa0376420-mRNA-1;Parent=Msa0376420;Name=Msa0376420-mRNA-1;_AED=0.11;_eAED=0.11;_QI=302|1|1|1|0.66|0.57|7|377|770 |
| chr3_1 | exon | 76522098 | 76523026 | 76522098 | ID=Msa0376420-mRNA-1:exon:18199;Parent=Msa0376420-mRNA-1 |
| chr3_1 | exon | 76523763 | 76524872 | 76523763 | ID=Msa0376420-mRNA-1:exon:18198;Parent=Msa0376420-mRNA-1 |
| chr3_1 | exon | 76526243 | 76526272 | 76526243 | ID=Msa0376420-mRNA-1:exon:18197;Parent=Msa0376420-mRNA-1 |
| chr3_1 | exon | 76526789 | 76526983 | 76526789 | ID=Msa0376420-mRNA-1:exon:18196;Parent=Msa0376420-mRNA-1 |
| chr3_1 | exon | 76527814 | 76528285 | 76527814 | ID=Msa0376420-mRNA-1:exon:18195;Parent=Msa0376420-mRNA-1 |
| chr3_1 | exon | 76529185 | 76529224 | 76529185 | ID=Msa0376420-mRNA-1:exon:18194;Parent=Msa0376420-mRNA-1 |
| chr3_1 | exon | 76529312 | 76529527 | 76529312 | ID=Msa0376420-mRNA-1:exon:18193;Parent=Msa0376420-mRNA-1 |
| chr3_1 | five_prime_UTR | 76529312 | 76529527 | 76529312 | ID=Msa0376420-mRNA-1:five_prime_utr;Parent=Msa0376420-mRNA-1 |
| chr3_1 | five_prime_UTR | 76529185 | 76529224 | 76529185 | ID=Msa0376420-mRNA-1:five_prime_utr;Parent=Msa0376420-mRNA-1 |
| chr3_1 | five_prime_UTR | 76528240 | 76528285 | 76528240 | ID=Msa0376420-mRNA-1:five_prime_utr;Parent=Msa0376420-mRNA-1 |
| chr3_1 | CDS | 76527814 | 76528239 | 76527814 | ID=Msa0376420-mRNA-1:cds;Parent=Msa0376420-mRNA-1 |
| chr3_1 | CDS | 76526789 | 76526983 | 76526789 | ID=Msa0376420-mRNA-1:cds;Parent=Msa0376420-mRNA-1 |
| chr3_1 | CDS | 76526243 | 76526272 | 76526243 | ID=Msa0376420-mRNA-1:cds;Parent=Msa0376420-mRNA-1 |
| chr3_1 | CDS | 76523763 | 76524872 | 76523763 | ID=Msa0376420-mRNA-1:cds;Parent=Msa0376420-mRNA-1 |
| chr3_1 | CDS | 76522475 | 76523026 | 76522475 | ID=Msa0376420-mRNA-1:cds;Parent=Msa0376420-mRNA-1 |
| chr3_1 | three_prime_UTR | 76522098 | 76522474 | 76522098 | ID=Msa0376420-mRNA-1:three_prime_utr;Parent=Msa0376420-mRNA-1 |
| Gene Sequence |
| Protein sequence |
