Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0516240 | XP_003602241.2 | 98.312 | 770 | 13 | 0 | 1 | 770 | 1 | 770 | 0.0 | 1585 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0516240 | sp|Q6F3I7|DAP4_PSEMX | 35.510 | 735 | 426 | 22 | 51 | 770 | 42 | 743 | 5.96e-134 | 417 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0516240 | A0A396IY90 | 98.312 | 770 | 13 | 0 | 1 | 770 | 1 | 770 | 0.0 | 1585 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010800 | Msa0516240 | 0.824478 | 7.897206e-54 | -8.615850e-47 |
| Msa0010910 | Msa0516240 | 0.811724 | 6.067832e-51 | -8.615850e-47 |
| Msa0017320 | Msa0516240 | 0.804395 | 2.204932e-49 | -8.615850e-47 |
| Msa0061500 | Msa0516240 | 0.802096 | 6.595830e-49 | -8.615850e-47 |
| Msa0074750 | Msa0516240 | 0.819367 | 1.205227e-52 | -8.615850e-47 |
| Msa0090970 | Msa0516240 | 0.812373 | 4.379478e-51 | -8.615850e-47 |
| Msa0102140 | Msa0516240 | 0.802870 | 4.569688e-49 | -8.615850e-47 |
| Msa0124320 | Msa0516240 | 0.811850 | 5.696689e-51 | -8.615850e-47 |
| Msa0130720 | Msa0516240 | 0.815734 | 7.943883e-52 | -8.615850e-47 |
| Msa0137510 | Msa0516240 | 0.803629 | 3.181835e-49 | -8.615850e-47 |
| Msa0139670 | Msa0516240 | 0.826919 | 2.082522e-54 | -8.615850e-47 |
| Msa0152560 | Msa0516240 | 0.808395 | 3.162732e-50 | -8.615850e-47 |
| Msa0171870 | Msa0516240 | 0.805192 | 1.502899e-49 | -8.615850e-47 |
| Msa0183450 | Msa0516240 | 0.802095 | 6.599724e-49 | -8.615850e-47 |
| Msa0189610 | Msa0516240 | 0.800949 | 1.133579e-48 | -8.615850e-47 |
| Msa0220730 | Msa0516240 | 0.807287 | 5.442048e-50 | -8.615850e-47 |
| Msa0376420 | Msa0516240 | 0.992033 | 6.422386e-191 | -8.615850e-47 |
| Msa0376600 | Msa0516240 | 0.808149 | 3.568339e-50 | -8.615850e-47 |
| Msa0382370 | Msa0516240 | 0.825141 | 5.511203e-54 | -8.615850e-47 |
| Msa0388730 | Msa0516240 | 0.820811 | 5.631716e-53 | -8.615850e-47 |
| Msa0395980 | Msa0516240 | 0.829967 | 3.826999e-55 | -8.615850e-47 |
| Msa0403490 | Msa0516240 | 0.851694 | 7.511349e-61 | -8.615850e-47 |
| Msa0411240 | Msa0516240 | 0.810914 | 9.094842e-51 | -8.615850e-47 |
| Msa0432160 | Msa0516240 | 0.818823 | 1.602739e-52 | -8.615850e-47 |
| Msa0440510 | Msa0516240 | 0.815182 | 1.053760e-51 | -8.615850e-47 |
| Msa0476680 | Msa0516240 | 0.822939 | 1.810914e-53 | -8.615850e-47 |
| Msa0244970 | Msa0516240 | 0.818051 | 2.397796e-52 | -8.615850e-47 |
| Msa0271790 | Msa0516240 | 0.802363 | 5.811900e-49 | -8.615850e-47 |
| Msa0308440 | Msa0516240 | 0.802191 | 6.307231e-49 | -8.615850e-47 |
| Msa0319290 | Msa0516240 | 0.824148 | 9.441591e-54 | -8.615850e-47 |
| Msa0320470 | Msa0516240 | 0.806202 | 9.222409e-50 | -8.615850e-47 |
| Msa0362890 | Msa0516240 | 0.809194 | 2.134962e-50 | -8.615850e-47 |
| Msa0491000 | Msa0516240 | 0.825020 | 5.885840e-54 | -8.615850e-47 |
| Msa0516240 | Msa0521010 | 0.823525 | 1.321785e-53 | -8.615850e-47 |
| Msa0516240 | Msa0544170 | 0.819423 | 1.170676e-52 | -8.615850e-47 |
| Msa0516240 | Msa0555320 | 0.801335 | 9.454254e-49 | -8.615850e-47 |
| Msa0516240 | Msa0566350 | 0.801906 | 7.217024e-49 | -8.615850e-47 |
| Msa0516240 | Msa0566750 | 0.805316 | 1.416057e-49 | -8.615850e-47 |
| Msa0516240 | Msa0581400 | 0.829507 | 4.951758e-55 | -8.615850e-47 |
| Msa0516240 | Msa0606080 | 0.813007 | 3.182929e-51 | -8.615850e-47 |
| Msa0516240 | Msa0645530 | 0.807133 | 5.865576e-50 | -8.615850e-47 |
| Msa0516240 | Msa0647030 | 0.804065 | 2.582726e-49 | -8.615850e-47 |
| Msa0516240 | Msa0649100 | 0.836912 | 7.086569e-57 | -8.615850e-47 |
| Msa0516240 | Msa0651560 | 0.816322 | 5.870399e-52 | -8.615850e-47 |
| Msa0516240 | Msa0697680 | 0.802124 | 6.509848e-49 | -8.615850e-47 |
| Msa0516240 | Msa0709120 | 0.825265 | 5.149544e-54 | -8.615850e-47 |
| Msa0516240 | Msa0712260 | 0.807064 | 6.067007e-50 | -8.615850e-47 |
| Msa0516240 | Msa0743870 | 0.807877 | 4.077559e-50 | -8.615850e-47 |
| Msa0516240 | Msa0756380 | 0.824477 | 7.902598e-54 | -8.615850e-47 |
| Msa0516240 | Msa0789560 | 0.829998 | 3.760578e-55 | -8.615850e-47 |
| Msa0516240 | Msa0834750 | 0.803318 | 3.691058e-49 | -8.615850e-47 |
| Msa0516240 | Msa0868190 | 0.811226 | 7.783549e-51 | -8.615850e-47 |
| Msa0516240 | Msa0985220 | 0.806770 | 6.998905e-50 | -8.615850e-47 |
| Msa0516240 | Msa1022030 | 0.826376 | 2.806157e-54 | -8.615850e-47 |
| Msa0516240 | Msa1031790 | 0.807122 | 5.898079e-50 | -8.615850e-47 |
| Msa0516240 | Msa1052620 | 0.810646 | 1.039516e-50 | -8.615850e-47 |
| Msa0516240 | Msa1089960 | 0.817165 | 3.799363e-52 | -8.615850e-47 |
| Msa0516240 | Msa1127430 | 0.837187 | 6.024961e-57 | -8.615850e-47 |
| Msa0516240 | Msa1137830 | 0.800810 | 1.210013e-48 | -8.615850e-47 |
| Msa0516240 | Msa1201640 | 0.820185 | 7.839808e-53 | -8.615850e-47 |
| Msa0516240 | Msa1205480 | 0.807853 | 4.125279e-50 | -8.615850e-47 |
| Msa0516240 | Msa1205590 | 0.810416 | 1.165058e-50 | -8.615850e-47 |
| Msa0516240 | Msa1208370 | 0.818624 | 1.778424e-52 | -8.615850e-47 |
| Msa0516240 | Msa1208990 | 0.805162 | 1.524956e-49 | -8.615850e-47 |
| Msa0516240 | Msa1209190 | 0.855814 | 4.901739e-62 | -8.615850e-47 |
| Msa0516240 | Msa1209860 | 0.815618 | 8.429696e-52 | -8.615850e-47 |
| Msa0516240 | Msa1214170 | 0.812763 | 3.599759e-51 | -8.615850e-47 |
| Msa0516240 | Msa1221330 | 0.817325 | 3.496343e-52 | -8.615850e-47 |
| Msa0516240 | Msa1234620 | 0.827386 | 1.609667e-54 | -8.615850e-47 |
| Msa0516240 | Msa1254620 | 0.804891 | 1.737369e-49 | -8.615850e-47 |
| Msa0516240 | Msa1297530 | 0.815418 | 9.340855e-52 | -8.615850e-47 |
| Msa0516240 | Msa1336040 | 0.828191 | 1.031077e-54 | -8.615850e-47 |
| Msa0516240 | Msa1339320 | 0.832936 | 7.113046e-56 | -8.615850e-47 |
| Msa0516240 | Msa1360020 | 0.817641 | 2.968343e-52 | -8.615850e-47 |
| Msa0516240 | Msa1366550 | 0.832704 | 8.121672e-56 | -8.615850e-47 |
| Msa0516240 | Msa1387240 | 0.818199 | 2.220674e-52 | -8.615850e-47 |
| Msa0516240 | Msa1391720 | 0.826796 | 2.228845e-54 | -8.615850e-47 |
| Msa0516240 | Msa1400930 | 0.824347 | 8.477831e-54 | -8.615850e-47 |
| Msa0516240 | Msa1401460 | 0.801659 | 8.110215e-49 | -8.615850e-47 |
| Msa0516240 | Msa1411000 | 0.811908 | 5.533584e-51 | -8.615850e-47 |
| Msa0516240 | Msa1411980 | 0.831289 | 1.815812e-55 | -8.615850e-47 |
| Msa0516240 | Msa1426910 | 0.819808 | 9.560191e-53 | -8.615850e-47 |
| Msa0516240 | Msa1434040 | 0.826244 | 3.017157e-54 | -8.615850e-47 |
| Msa0516240 | Msa1437330 | 0.809828 | 1.559893e-50 | -8.615850e-47 |
| Msa0516240 | Msa1454960 | 0.822643 | 2.122569e-53 | -8.615850e-47 |
| Msa0516240 | Msa1458090 | 0.809421 | 1.907663e-50 | -8.615850e-47 |
| Msa0516240 | Msa1463030 | 0.823259 | 1.524999e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0516240 | MtrunA17_Chr3g0126791 | 98.312 | 770 | 13 | 0 | 1 | 770 | 1 | 770 | 0.0 | 1585 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0516240 | AT5G24260.1 | 68.182 | 748 | 228 | 8 | 29 | 770 | 3 | 746 | 0.0 | 1052 |
| Msa0516240 | AT5G24260.3 | 68.182 | 748 | 228 | 8 | 29 | 770 | 3 | 746 | 0.0 | 1052 |
| Msa0516240 | AT5G24260.4 | 68.182 | 748 | 228 | 8 | 29 | 770 | 3 | 746 | 0.0 | 1052 |
| Msa0516240 | AT5G24260.2 | 68.182 | 748 | 228 | 8 | 29 | 770 | 3 | 746 | 0.0 | 1052 |
| Msa0516240 | AT5G24260.5 | 67.908 | 564 | 174 | 6 | 29 | 588 | 3 | 563 | 0.0 | 773 |
| Msa0516240 | AT5G36210.1 | 24.074 | 270 | 180 | 9 | 512 | 768 | 452 | 709 | 8.27e-12 | 69.3 |
Find 218 sgRNAs with CRISPR-Local
Find 482 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAACCATGATTAATGTTTA+TGG | 0.150825 | 3_4:-67739579 | Msa0516240:CDS |
| ATAAATAAATAAGGGAAATT+TGG | 0.165667 | 3_4:-67745220 | Msa0516240:five_prime_UTR |
| AAATAACAATTCTTGTTTAT+TGG | 0.169608 | 3_4:+67743739 | None:intergenic |
| CGAGGCATGTGGCGCTCATC+TGG | 0.182815 | 3_4:+67738261 | None:intergenic |
| AATATTTGGCAAGAGTTAAT+TGG | 0.215197 | 3_4:-67740301 | Msa0516240:CDS |
| ATAAATTGAATAAATAAATA+AGG | 0.233545 | 3_4:-67745229 | Msa0516240:five_prime_UTR |
| TTTCTGTTTAATGTATTATC+AGG | 0.274208 | 3_4:+67743785 | None:intergenic |
| AGACAACGAGGATGAATATT+TGG | 0.301631 | 3_4:-67740315 | Msa0516240:CDS |
| CTAGGGGTTGTTTCGGTAGC+TGG | 0.308805 | 3_4:-67740386 | Msa0516240:CDS |
| GATGCTGATGATCAGTTTAC+TGG | 0.311598 | 3_4:-67738654 | Msa0516240:CDS |
| AGGTTGAGGGAACGCGGTTT+AGG | 0.320038 | 3_4:-67743653 | Msa0516240:CDS |
| GATGCAAACGGGACTTGTTT+AGG | 0.320275 | 3_4:-67740047 | Msa0516240:CDS |
| TATACTAACCTTCGATTCAT+AGG | 0.324241 | 3_4:+67737846 | None:intergenic |
| TCCTGGTGCCGTTACCTGCT+GGG | 0.325019 | 3_4:-67743583 | Msa0516240:CDS |
| GCTTCTCTTCATTTAATGAT+TGG | 0.337665 | 3_4:-67737878 | Msa0516240:three_prime_UTR |
| GTCCTGGTGCCGTTACCTGC+TGG | 0.337728 | 3_4:-67743584 | Msa0516240:CDS |
| ACCCATGGTGCAAAGGAAAA+TGG | 0.337836 | 3_4:-67742562 | Msa0516240:CDS |
| GAAATAAAGGCATCTTAGTT+TGG | 0.353249 | 3_4:-67739488 | Msa0516240:CDS |
| GCGCAATACTTGAGAAATAA+AGG | 0.356785 | 3_4:-67739501 | Msa0516240:CDS |
| GCTACTTTACTCAAGATAAC+TGG | 0.358447 | 3_4:-67738062 | Msa0516240:three_prime_UTR |
| TTGCCATCTGAAAATAAATC+AGG | 0.362673 | 3_4:-67738441 | Msa0516240:CDS |
| TTGCAGAATTTGGTCACATT+GGG | 0.364383 | 3_4:-67738605 | Msa0516240:CDS |
| ATATAGCGATCGAGTTTATA+TGG | 0.367319 | 3_4:-67738235 | Msa0516240:CDS |
| GGTATTACTATGTTCGTTAG+AGG | 0.370356 | 3_4:-67739769 | Msa0516240:CDS |
| TCCCTTGCCATGTGTTAGTC+TGG | 0.373715 | 3_4:+67739866 | None:intergenic |
| ACTCAAGATAACTGGCCATC+TGG | 0.374108 | 3_4:-67738054 | Msa0516240:three_prime_UTR |
| AATTGAGGAGGGAGAGGTTG+AGG | 0.378937 | 3_4:-67743667 | Msa0516240:CDS |
| TACAGCTCGTTTCTAACTCT+TGG | 0.390338 | 3_4:-67739545 | Msa0516240:CDS |
| GACTGTATTTCAACAATCTC+TGG | 0.393381 | 3_4:+67739672 | None:intergenic |
| GGGTGAAGACGAACTCAAAA+AGG | 0.393474 | 3_4:-67743613 | Msa0516240:CDS |
| GAGGAGATGGATAGGAAAAC+TGG | 0.395551 | 3_4:-67740572 | Msa0516240:CDS |
| TTGCCATGTGTTAGTCTGGT+AGG | 0.399815 | 3_4:+67739870 | None:intergenic |
| GGACTAAAACTTATTGAAGT+TGG | 0.400840 | 3_4:+67743839 | None:intergenic |
| ATAGCACACTTGAAGAAATC+TGG | 0.401421 | 3_4:+67738528 | None:intergenic |
| CTCAAGATAACTGGCCATCT+GGG | 0.406275 | 3_4:-67738053 | Msa0516240:three_prime_UTR |
| AGATTACAGACATGTTGAAT+TGG | 0.407614 | 3_4:+67745068 | None:intergenic |
| GACGATGGTACTACCTTGTA+TGG | 0.411006 | 3_4:-67739648 | Msa0516240:CDS |
| TGCCATGTGTTAGTCTGGTA+GGG | 0.411102 | 3_4:+67739871 | None:intergenic |
| TATCACCTGTGCTATATATT+CGG | 0.414471 | 3_4:+67742006 | None:intergenic |
| AGGACAAAGGAGAGATATAT+TGG | 0.414862 | 3_4:-67740198 | Msa0516240:CDS |
| AAGCCTGATGCTTCAAGATT+CGG | 0.415695 | 3_4:-67739615 | Msa0516240:CDS |
| ATTAAGTTTGATATTAGAAC+AGG | 0.416668 | 3_4:-67740218 | Msa0516240:CDS |
| AGACAGATGAGGGTCAATAA+TGG | 0.417702 | 3_4:+67742666 | None:intergenic |
| GGCTATTTAAAGCACAAACT+TGG | 0.425012 | 3_4:-67738684 | Msa0516240:CDS |
| CTCTATATTCATGATGCAAA+CGG | 0.425144 | 3_4:-67740059 | Msa0516240:CDS |
| TAAGAAATCAAACTATCATC+TGG | 0.425613 | 3_4:+67743818 | None:intergenic |
| TGGATAGGAAAACTGGATAC+TGG | 0.426305 | 3_4:-67740565 | Msa0516240:CDS |
| GGATTCAAGAGGACTATCTA+AGG | 0.426424 | 3_4:+67739944 | None:intergenic |
| CTAATCAGTTATGAGACAAT+TGG | 0.427499 | 3_4:+67738084 | None:intergenic |
| GATAGATAGATAGATAGATA+TGG | 0.428322 | 3_4:+67745176 | None:intergenic |
| CTTGCAGAATTTGGTCACAT+TGG | 0.428504 | 3_4:-67738606 | Msa0516240:CDS |
| TATTGCGCAATCTCTTCAAC+CGG | 0.431964 | 3_4:+67743884 | None:intergenic |
| GCATTTGAAGCTCCTGCAAA+AGG | 0.434061 | 3_4:+67740419 | None:intergenic |
| TAAATTGAATAAATAAATAA+GGG | 0.434807 | 3_4:-67745228 | Msa0516240:five_prime_UTR |
| TTGGTAACTCCTTTATCAAA+AGG | 0.438879 | 3_4:+67740131 | None:intergenic |
| GTCACATTGGGTTGTACGGT+TGG | 0.441897 | 3_4:-67738593 | Msa0516240:CDS |
| GACAGATGAGGGTCAATAAT+GGG | 0.442346 | 3_4:+67742667 | None:intergenic |
| ATCTGGGCTAGTGAGAAATC+AGG | 0.443445 | 3_4:-67740092 | Msa0516240:CDS |
| AATGCGCCTAGGGGTTGTTT+CGG | 0.444593 | 3_4:-67740393 | Msa0516240:CDS |
| ATCAATGCACTTGTGGCGGC+TGG | 0.447952 | 3_4:-67738309 | Msa0516240:CDS |
| TTCTCAAGTATTGCGCTCTC+AGG | 0.448351 | 3_4:+67739508 | None:intergenic |
| CTTGAATGGGGCTCAAAAGA+TGG | 0.449053 | 3_4:-67745299 | None:intergenic |
| CAAGTTATTTATTCAGTTGG+TGG | 0.449472 | 3_4:+67745138 | None:intergenic |
| TTCTTCAAGTGTGCTATAGC+TGG | 0.449635 | 3_4:-67738522 | Msa0516240:CDS |
| TATCCATCCCACGATGTAAC+GGG | 0.450800 | 3_4:+67738495 | None:intergenic |
| GATAAATCCACCTGAAAACT+TGG | 0.452007 | 3_4:+67740112 | None:intergenic |
| TTTATATGGAAGAGAGGATG+TGG | 0.452489 | 3_4:-67738221 | Msa0516240:CDS |
| CCTGAGTTCGTGGTGGAAGA+TGG | 0.453664 | 3_4:+67744951 | None:intergenic |
| CTCTCATCAAGTCCGCCATC+AGG | 0.458202 | 3_4:+67743710 | None:intergenic |
| TAACAAGTTATTTATTCAGT+TGG | 0.458311 | 3_4:+67745135 | None:intergenic |
| GGGTTGTACGGTTGGAGCTA+TGG | 0.460113 | 3_4:-67738585 | Msa0516240:CDS |
| ACAGGTCTAATATATTTCAC+TGG | 0.460672 | 3_4:-67739969 | Msa0516240:CDS |
| AAGGTTAGTATAACTAGGAT+TGG | 0.461439 | 3_4:-67737835 | Msa0516240:three_prime_UTR |
| ATGGGCGAAGCTGGTATACT+AGG | 0.462537 | 3_4:+67742685 | None:intergenic |
| CCCCAGCAGGTAACGGCACC+AGG | 0.465133 | 3_4:+67743582 | None:intergenic |
| CAAATGCTAAAATGCGCCTA+GGG | 0.465579 | 3_4:-67740403 | Msa0516240:CDS |
| ACCACCATAAACATTAATCA+TGG | 0.465968 | 3_4:+67739575 | None:intergenic |
| ATTGAGGAGGGAGAGGTTGA+GGG | 0.466179 | 3_4:-67743666 | Msa0516240:CDS |
| GAAGCTCCTGCAAAAGGATA+AGG | 0.468977 | 3_4:+67740425 | None:intergenic |
| TAGCTGGAGGCTCCACCACT+TGG | 0.476298 | 3_4:-67740370 | Msa0516240:CDS |
| CTCAGTTGGCACAGATGCAC+AGG | 0.476702 | 3_4:-67740456 | Msa0516240:CDS |
| AACTGGATACTGGTGGTCAC+TGG | 0.484024 | 3_4:-67740555 | Msa0516240:CDS |
| AAGTTTAGCACAGTATAAGT+TGG | 0.485619 | 3_4:+67739923 | None:intergenic |
| TTGAATGGGGCTCAAAAGAT+GGG | 0.488768 | 3_4:-67745298 | None:intergenic |
| TTTCTGATTTCAGGAGGAGA+TGG | 0.489845 | 3_4:-67740585 | Msa0516240:intron |
| GCAAGAGTTAATTGGATGCA+TGG | 0.490094 | 3_4:-67740293 | Msa0516240:CDS |
| CTTGGATGGATCTTGTCTGT+GGG | 0.491023 | 3_4:-67740352 | Msa0516240:CDS |
| TTTGGTCACATTGGGTTGTA+CGG | 0.492231 | 3_4:-67738597 | Msa0516240:CDS |
| TGCCAACTGAGCTTCTACCT+TGG | 0.492261 | 3_4:+67740468 | None:intergenic |
| TCTATATTCATGATGCAAAC+GGG | 0.493596 | 3_4:-67740058 | Msa0516240:CDS |
| GGTCCGAATCTTGAAGCATC+AGG | 0.494458 | 3_4:+67739612 | None:intergenic |
| ATACCCTAGGTGGACAACTA+AGG | 0.496108 | 3_4:+67739787 | None:intergenic |
| TCACTGCTCAGATCATAAAC+AGG | 0.497243 | 3_4:-67740262 | Msa0516240:CDS |
| CATCCATTCACCTTCAGTGA+TGG | 0.500240 | 3_4:+67740022 | None:intergenic |
| CGCTATATCGCCGAGGCATG+TGG | 0.502434 | 3_4:+67738250 | None:intergenic |
| TAAGCAAGCATAGATCCATC+TGG | 0.503242 | 3_4:+67742643 | None:intergenic |
| CCATCTTCCACCACGAACTC+AGG | 0.504637 | 3_4:-67744951 | Msa0516240:intron |
| TGATGAGAGTAATATTTCTC+CGG | 0.511360 | 3_4:-67743696 | Msa0516240:CDS |
| ATTTGTGTATTGCAGACTCA+CGG | 0.511897 | 3_4:-67742034 | Msa0516240:intron |
| AGAAATCTGGATATCTTGAA+AGG | 0.514134 | 3_4:+67738541 | None:intergenic |
| GATTGCGCAATATCCATTGC+CGG | 0.514911 | 3_4:-67743873 | Msa0516240:CDS |
| GGGTCAATAATGGGCGAAGC+TGG | 0.515828 | 3_4:+67742676 | None:intergenic |
| CAGATGAGCGCCACATGCCT+CGG | 0.517161 | 3_4:-67738260 | Msa0516240:CDS |
| GACCCATCACTGAAGGTGAA+TGG | 0.517518 | 3_4:-67740025 | Msa0516240:CDS |
| GCCATGTGTTAGTCTGGTAG+GGG | 0.518664 | 3_4:+67739872 | None:intergenic |
| TTCCCCTCATCTTGTGCACA+TGG | 0.520787 | 3_4:+67738394 | None:intergenic |
| GTATCCATCCCACGATGTAA+CGG | 0.520792 | 3_4:+67738494 | None:intergenic |
| GAAGTTGGTGATACATATCC+CGG | 0.524663 | 3_4:+67743854 | None:intergenic |
| TAAAGGCATCTTAGTTTGGA+AGG | 0.526073 | 3_4:-67739484 | Msa0516240:intron |
| CTCCCTTAGTTGTCCACCTA+GGG | 0.532240 | 3_4:-67739790 | Msa0516240:CDS |
| TTGGATTGTCTTCAAGTGAA+AGG | 0.534369 | 3_4:+67745087 | None:intergenic |
| GAAATCTGGATATCTTGAAA+GGG | 0.534407 | 3_4:+67738542 | None:intergenic |
| GGTATTTGCTGCTCATACAA+AGG | 0.535611 | 3_4:+67739729 | None:intergenic |
| GGATGTGGGAATTCATTGAC+AGG | 0.535650 | 3_4:-67738206 | Msa0516240:CDS |
| GATTTCAGGAGGAGATGGAT+AGG | 0.537264 | 3_4:-67740580 | Msa0516240:intron |
| TCATCAAGTCCGCCATCAGG+CGG | 0.538032 | 3_4:+67743713 | None:intergenic |
| ATCCATTCACCTTCAGTGAT+GGG | 0.538637 | 3_4:+67740023 | None:intergenic |
| GACTAATAAAATGTGATGAT+CGG | 0.539042 | 3_4:+67737993 | None:intergenic |
| CACCAAGGTAGAAGCTCAGT+TGG | 0.540984 | 3_4:-67740470 | Msa0516240:CDS |
| CAACAGAGGAACTTCTAGAC+GGG | 0.542457 | 3_4:-67738721 | Msa0516240:CDS |
| ACTTGGATGGATCTTGTCTG+TGG | 0.542619 | 3_4:-67740353 | Msa0516240:CDS |
| TTGTACGGTTGGAGCTATGG+CGG | 0.546095 | 3_4:-67738582 | Msa0516240:CDS |
| AGAAAGTAACTAACCCCAGC+AGG | 0.546182 | 3_4:+67743569 | None:intergenic |
| TTTGTGTATTGCAGACTCAC+GGG | 0.547840 | 3_4:-67742033 | Msa0516240:intron |
| GGAAGGTTGTTGATTGTGCA+TGG | 0.549313 | 3_4:-67738375 | Msa0516240:CDS |
| GCAAATCGCCGGTGTGAATG+AGG | 0.549981 | 3_4:-67739994 | Msa0516240:CDS |
| GAGGCATGTGGCGCTCATCT+GGG | 0.550136 | 3_4:+67738262 | None:intergenic |
| TTACTATGTTCGTTAGAGGA+TGG | 0.552609 | 3_4:-67739765 | Msa0516240:CDS |
| TGAACCATGTGCACAAGATG+AGG | 0.552873 | 3_4:-67738398 | Msa0516240:CDS |
| TACCAGACTAACACATGGCA+AGG | 0.554093 | 3_4:-67739868 | Msa0516240:CDS |
| TGTACGGTTGGAGCTATGGC+GGG | 0.556071 | 3_4:-67738581 | Msa0516240:CDS |
| CAACAATCTCTGGAGGCTCA+AGG | 0.557617 | 3_4:+67739682 | None:intergenic |
| TTATTTAGCCCGCCTGATGG+CGG | 0.560074 | 3_4:-67743722 | Msa0516240:CDS |
| TGAAATCTAACCTGAGTTCG+TGG | 0.561775 | 3_4:+67744941 | None:intergenic |
| TCAAATGCTAAAATGCGCCT+AGG | 0.562678 | 3_4:-67740404 | Msa0516240:CDS |
| ATTGCGCAATATCCATTGCC+GGG | 0.564730 | 3_4:-67743872 | Msa0516240:CDS |
| TGGTAGAAGAGAACAAAACT+TGG | 0.565766 | 3_4:-67740178 | Msa0516240:CDS |
| TTAGAAACGAGCTGTACACT+TGG | 0.569407 | 3_4:+67739552 | None:intergenic |
| GACCCTCATCTGTCTCCAGA+TGG | 0.570083 | 3_4:-67742658 | Msa0516240:CDS |
| TACCCTAGGTGGACAACTAA+GGG | 0.570439 | 3_4:+67739788 | None:intergenic |
| CTTGTAAAGAGCTCCATACA+AGG | 0.571379 | 3_4:+67739635 | None:intergenic |
| TAAAAGAACTTAAACTACAC+TGG | 0.572161 | 3_4:+67738127 | None:intergenic |
| GCAGTTGACCCATGGTGCAA+AGG | 0.573336 | 3_4:-67742569 | Msa0516240:CDS |
| TTATATGGAAGAGAGGATGT+GGG | 0.574511 | 3_4:-67738220 | Msa0516240:CDS |
| CATCAAGTCCGCCATCAGGC+GGG | 0.574630 | 3_4:+67743714 | None:intergenic |
| GAACCATGTGCACAAGATGA+GGG | 0.575361 | 3_4:-67738397 | Msa0516240:CDS |
| CCTGGTGCCGTTACCTGCTG+GGG | 0.575753 | 3_4:-67743582 | Msa0516240:intron |
| TAACTAACCCCAGCAGGTAA+CGG | 0.583832 | 3_4:+67743575 | None:intergenic |
| ATTAGTTGATGAATGAGAAG+AGG | 0.584574 | 3_4:-67743994 | Msa0516240:exon |
| TGGTGCACCCGTTACATCGT+GGG | 0.584883 | 3_4:-67738502 | Msa0516240:CDS |
| TTGTTATTTAGCCCGCCTGA+TGG | 0.586114 | 3_4:-67743725 | Msa0516240:CDS |
| TGGAGGCTCCACCACTTGGA+TGG | 0.587121 | 3_4:-67740366 | Msa0516240:CDS |
| ACCATGATTAATGTTTATGG+TGG | 0.587366 | 3_4:-67739576 | Msa0516240:CDS |
| GCCGGTGTGAATGAGGCCAC+AGG | 0.587804 | 3_4:-67739987 | Msa0516240:CDS |
| ACTCCCTTAGTTGTCCACCT+AGG | 0.588428 | 3_4:-67739791 | Msa0516240:CDS |
| ATCCATCTGGAGACAGATGA+GGG | 0.588739 | 3_4:+67742656 | None:intergenic |
| TGTTTAGGACCCATCACTGA+AGG | 0.590067 | 3_4:-67740032 | Msa0516240:CDS |
| TTGGATGGATCTTGTCTGTG+GGG | 0.592092 | 3_4:-67740351 | Msa0516240:CDS |
| CAGGTCTAATATATTTCACT+GGG | 0.593282 | 3_4:-67739968 | Msa0516240:CDS |
| ATGTTCGCATGTGATGATCA+AGG | 0.595720 | 3_4:+67739829 | None:intergenic |
| TGGATGGATCTTGTCTGTGG+GGG | 0.597512 | 3_4:-67740350 | Msa0516240:CDS |
| CAAGACTTCCTATGAATCGA+AGG | 0.599983 | 3_4:-67737854 | Msa0516240:three_prime_UTR |
| AGGGAGAGGTTGAGGGAACG+CGG | 0.601626 | 3_4:-67743659 | Msa0516240:CDS |
| GGGGTTGTTTCGGTAGCTGG+AGG | 0.602505 | 3_4:-67740383 | Msa0516240:CDS |
| CAGCTACCGAAACAACCCCT+AGG | 0.603315 | 3_4:+67740387 | None:intergenic |
| ACATCATTGAAGTCTGTCAC+AGG | 0.604346 | 3_4:+67743935 | None:intergenic |
| TGCCATCTGAAAATAAATCA+GGG | 0.605999 | 3_4:-67738440 | Msa0516240:CDS |
| GGTGATACATATCCCGGCAA+TGG | 0.606988 | 3_4:+67743860 | None:intergenic |
| GACAAGATCCATCCAAGTGG+TGG | 0.607099 | 3_4:+67740358 | None:intergenic |
| ATGAAATGAAAAGCCCCAGA+TGG | 0.613687 | 3_4:+67738039 | None:intergenic |
| ATGTGCACAAGATGAGGGGA+AGG | 0.614216 | 3_4:-67738392 | Msa0516240:CDS |
| GCTTGCCGAATATATAGCAC+AGG | 0.616409 | 3_4:-67742011 | Msa0516240:intron |
| ATCGAGTTTATATGGAAGAG+AGG | 0.616918 | 3_4:-67738227 | Msa0516240:CDS |
| TCGCATTACACAAACACCTC+CGG | 0.616938 | 3_4:+67744020 | None:intergenic |
| ATTCTACACAGAGAAATACA+TGG | 0.617945 | 3_4:-67738466 | Msa0516240:CDS |
| GATCCATCTGGAGACAGATG+AGG | 0.619816 | 3_4:+67742655 | None:intergenic |
| TCAAGATAACTGGCCATCTG+GGG | 0.621054 | 3_4:-67738052 | Msa0516240:three_prime_UTR |
| AATCGAAGGTTAGTATAACT+AGG | 0.621758 | 3_4:-67737840 | Msa0516240:three_prime_UTR |
| AAGGCTTATCAATGCACTTG+TGG | 0.626461 | 3_4:-67738316 | Msa0516240:CDS |
| CAGTATAAGTTGGATTCAAG+AGG | 0.627056 | 3_4:+67739933 | None:intergenic |
| TTGATATTAGAACAGGACAA+AGG | 0.629145 | 3_4:-67740211 | Msa0516240:CDS |
| GCTTATCAATGCACTTGTGG+CGG | 0.629640 | 3_4:-67738313 | Msa0516240:CDS |
| AACCATGTGCACAAGATGAG+GGG | 0.630415 | 3_4:-67738396 | Msa0516240:CDS |
| ACAACAGAGGAACTTCTAGA+CGG | 0.635072 | 3_4:-67738722 | Msa0516240:CDS |
| GCACCCGTTACATCGTGGGA+TGG | 0.637197 | 3_4:-67738498 | Msa0516240:CDS |
| CATCACTGAAGGTGAATGGA+TGG | 0.651164 | 3_4:-67740021 | Msa0516240:CDS |
| TTCTACACAGAGAAATACAT+GGG | 0.652607 | 3_4:-67738465 | Msa0516240:CDS |
| CTGGTGCACCCGTTACATCG+TGG | 0.652853 | 3_4:-67738503 | Msa0516240:CDS |
| AGTGAAATATATTAGACCTG+TGG | 0.653575 | 3_4:+67739971 | None:intergenic |
| TGTTGACAGTTAGACAACAG+AGG | 0.655345 | 3_4:-67738735 | Msa0516240:intron |
| GAACATAGTAATACCCTAGG+TGG | 0.657301 | 3_4:+67739777 | None:intergenic |
| AGTCTGGTAGGGGCTTGAAG+TGG | 0.659372 | 3_4:+67739882 | None:intergenic |
| AGGAGTGACACGATACGAGT+GGG | 0.664921 | 3_4:-67743633 | Msa0516240:CDS |
| TAGGAGTGACACGATACGAG+TGG | 0.665515 | 3_4:-67743634 | Msa0516240:CDS |
| ATTGCGCAATCTCTTCAACC+GGG | 0.665780 | 3_4:+67743885 | None:intergenic |
| ACCAGACTAACACATGGCAA+GGG | 0.666632 | 3_4:-67739867 | Msa0516240:CDS |
| ACCTGTGGCCTCATTCACAC+CGG | 0.667979 | 3_4:+67739986 | None:intergenic |
| AACAGAGGAACTTCTAGACG+GGG | 0.668246 | 3_4:-67738720 | Msa0516240:CDS |
| CGAGCTAAAAGCAATGAGAG+AGG | 0.668312 | 3_4:+67737939 | None:intergenic |
| TGTATTTCAACAATCTCTGG+AGG | 0.668633 | 3_4:+67739675 | None:intergenic |
| GAATCAAAGCAGTTGACCCA+TGG | 0.675898 | 3_4:-67742577 | Msa0516240:CDS |
| TGGTGCATAATTCTGAAAAG+CGG | 0.676516 | 3_4:+67740488 | None:intergenic |
| TGAATGGGGCTCAAAAGATG+GGG | 0.680723 | 3_4:-67745297 | None:intergenic |
| AACGAACATAGTAATACCCT+AGG | 0.685165 | 3_4:+67739774 | None:intergenic |
| GCCCCTACCAGACTAACACA+TGG | 0.695198 | 3_4:-67739873 | Msa0516240:CDS |
| AAATGCTAAAATGCGCCTAG+GGG | 0.695946 | 3_4:-67740402 | Msa0516240:CDS |
| TGGATGGTTGAGCAAATCGC+CGG | 0.698018 | 3_4:-67740005 | Msa0516240:CDS |
| ATAGGAAAACTGGATACTGG+TGG | 0.700243 | 3_4:-67740562 | Msa0516240:CDS |
| ATCAGTTTACTGGAGCAGAG+TGG | 0.703312 | 3_4:-67738644 | Msa0516240:CDS |
| GTTGAAATACAGTCCGACGA+TGG | 0.705542 | 3_4:-67739663 | Msa0516240:CDS |
| CTCCTGCAAAAGGATAAGGA+TGG | 0.706392 | 3_4:+67740429 | None:intergenic |
| GATGTGCAAAATCTTGACGA+CGG | 0.706842 | 3_4:-67743917 | Msa0516240:CDS |
| ATACAAGGTAGTACCATCGT+CGG | 0.708380 | 3_4:+67739650 | None:intergenic |
| AATCTAACCTGAGTTCGTGG+TGG | 0.710592 | 3_4:+67744944 | None:intergenic |
| ACTCGATCGCTATATCGCCG+AGG | 0.738819 | 3_4:+67738243 | None:intergenic |
| ACAGAGGAACTTCTAGACGG+GGG | 0.740212 | 3_4:-67738719 | Msa0516240:CDS |
| ACAGACAAGATCCATCCAAG+TGG | 0.742236 | 3_4:+67740355 | None:intergenic |
| TGTGAAAGAACTAGACAACG+AGG | 0.799641 | 3_4:-67740327 | Msa0516240:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATTTATTTATTTATTTT+TGG | - | chr3_4:67740086-67740105 | Msa0516240:CDS | 0.0% |
| !!! | TTTATTTTTTTCTTTTTATG+CGG | + | chr3_4:67737849-67737868 | None:intergenic | 10.0% |
| !!! | AAAAAAAAAAAAGACTTTTT+GGG | + | chr3_4:67738391-67738410 | None:intergenic | 10.0% |
| !!! | AAAAAAAAAAAAAGACTTTT+TGG | + | chr3_4:67738392-67738411 | None:intergenic | 10.0% |
| !!! | ATTTTTACTTCAAAATTTAT+TGG | + | chr3_4:67738858-67738877 | None:intergenic | 10.0% |
| !! | TATTATGAATGTTATTAATA+CGG | - | chr3_4:67739003-67739022 | Msa0516240:intron | 10.0% |
| !!! | TTTTTTTATTGGTTTAAAAA+TGG | - | chr3_4:67741935-67741954 | Msa0516240:intron | 10.0% |
| !! | TTAATTAATTTATAATTGCT+AGG | + | chr3_4:67741982-67742001 | None:intergenic | 10.0% |
| !! | ATAAATAAATAAGGGAAATT+TGG | - | chr3_4:67737885-67737904 | Msa0516240:three_prime_UTR | 15.0% |
| !!! | TGATATTTTGAATTGAATAA+CGG | + | chr3_4:67738204-67738223 | None:intergenic | 15.0% |
| !!! | CTTTATCTTTTTTTCTTTTA+TGG | - | chr3_4:67738296-67738315 | Msa0516240:CDS | 15.0% |
| !!! | AAATAACAATTCTTGTTTAT+TGG | + | chr3_4:67739369-67739388 | None:intergenic | 15.0% |
| !! | ATATCTATATCTATTGAAAA+GGG | + | chr3_4:67739785-67739804 | None:intergenic | 15.0% |
| !! | AATATCTATATCTATTGAAA+AGG | + | chr3_4:67739786-67739805 | None:intergenic | 15.0% |
| !! | AAATACAATAAAATTCAGAA+AGG | + | chr3_4:67739901-67739920 | None:intergenic | 15.0% |
| !!! | TCTTTAGAAAAAAATGAATT+TGG | - | chr3_4:67739921-67739940 | Msa0516240:CDS | 15.0% |
| !!! | ATATATATATTCATTTTGGT+AGG | - | chr3_4:67742411-67742430 | Msa0516240:intron | 15.0% |
| !!! | ATGAATTGATTCAATAAAAT+AGG | + | chr3_4:67744274-67744293 | None:intergenic | 15.0% |
| !! | AAAGAAAGTAATAATTAACA+TGG | + | chr3_4:67744351-67744370 | None:intergenic | 15.0% |
| !! | TAACAAGTTATTTATTCAGT+TGG | + | chr3_4:67737973-67737992 | None:intergenic | 20.0% |
| !! | GATAGTTTGATGAAAATAAA+AGG | + | chr3_4:67738070-67738089 | None:intergenic | 20.0% |
| !! | ATGAAAATGAATAGAAGAAA+TGG | + | chr3_4:67738111-67738130 | None:intergenic | 20.0% |
| !! | ATTCACATGAATAACAAAAA+TGG | + | chr3_4:67738521-67738540 | None:intergenic | 20.0% |
| !!! | AATTCTTTTAAGTGTATGTT+TGG | - | chr3_4:67738543-67738562 | Msa0516240:CDS | 20.0% |
| !!! | AAAATTGATTTTGACATGTT+TGG | - | chr3_4:67738584-67738603 | Msa0516240:CDS | 20.0% |
| !! | TAAAATACTTAGTGTATGTT+TGG | + | chr3_4:67738830-67738849 | None:intergenic | 20.0% |
| !!! | AAACATACACTAAGTATTTT+AGG | - | chr3_4:67738829-67738848 | Msa0516240:intron | 20.0% |
| !! | TTTCTGTTTAATGTATTATC+AGG | + | chr3_4:67739323-67739342 | None:intergenic | 20.0% |
| !!! | ATTTATTTTTGGAATGAAAG+AGG | - | chr3_4:67740097-67740116 | Msa0516240:CDS | 20.0% |
| !!! | TTTATTTTTGGAATGAAAGA+GGG | - | chr3_4:67740098-67740117 | Msa0516240:CDS | 20.0% |
| !! | AATGAATGCAAAATACAAAA+AGG | + | chr3_4:67740303-67740322 | None:intergenic | 20.0% |
| !! | TTAACAACAAAAAAGTTAGA+TGG | - | chr3_4:67740702-67740721 | Msa0516240:intron | 20.0% |
| !! | TTTAAATAATCAGTTATGCA+TGG | - | chr3_4:67740978-67740997 | Msa0516240:intron | 20.0% |
| !!! | ACGTGTATTTTAATCTATTT+TGG | - | chr3_4:67741147-67741166 | Msa0516240:intron | 20.0% |
| !!! | CGTGTATTTTAATCTATTTT+GGG | - | chr3_4:67741148-67741167 | Msa0516240:intron | 20.0% |
| !! | AGACAAAAACTGTTATATTT+CGG | + | chr3_4:67741482-67741501 | None:intergenic | 20.0% |
| !! | ATTCATAGTTATAGAAGAAT+TGG | + | chr3_4:67741728-67741747 | None:intergenic | 20.0% |
| !! | AATAAATGAATACAAAACCT+GGG | + | chr3_4:67741778-67741797 | None:intergenic | 20.0% |
| !! | TATCAATATCCTTTAAATAG+AGG | + | chr3_4:67741830-67741849 | None:intergenic | 20.0% |
| !!! | GAATGATAGAGTTTTTTTAT+TGG | - | chr3_4:67741924-67741943 | Msa0516240:intron | 20.0% |
| !! | TTATAATTGCTAGGAAATAT+AGG | + | chr3_4:67741973-67741992 | None:intergenic | 20.0% |
| !! | TGACTAAATTATGAATCATA+AGG | + | chr3_4:67742231-67742250 | None:intergenic | 20.0% |
| !! | TATGATTCATAATTTAGTCA+TGG | - | chr3_4:67742231-67742250 | Msa0516240:intron | 20.0% |
| !!! | GTTTTATTGCATATTATGTA+TGG | - | chr3_4:67742294-67742313 | Msa0516240:intron | 20.0% |
| !! | AAATGCAAGATTGTTAAAAT+AGG | + | chr3_4:67742459-67742478 | None:intergenic | 20.0% |
| !!! | TAATGATCTTTATTTTAGTC+TGG | + | chr3_4:67742871-67742890 | None:intergenic | 20.0% |
| !! | ATTAAGTTTGATATTAGAAC+AGG | - | chr3_4:67742887-67742906 | Msa0516240:intron | 20.0% |
| !! | AAAACCATGATTAATGTTTA+TGG | - | chr3_4:67743526-67743545 | Msa0516240:intron | 20.0% |
| !! | TCATAATCAAGTAAAATTCA+GGG | + | chr3_4:67743653-67743672 | None:intergenic | 20.0% |
| !! | ATCATAATCAAGTAAAATTC+AGG | + | chr3_4:67743654-67743673 | None:intergenic | 20.0% |
| !! | TGATGTAAATATGATTAAGA+TGG | - | chr3_4:67743861-67743880 | Msa0516240:CDS | 20.0% |
| !! | GATGTAAATATGATTAAGAT+GGG | - | chr3_4:67743862-67743881 | Msa0516240:CDS | 20.0% |
| !!! | ACATTTTCCATGTATAAATA+TGG | + | chr3_4:67743894-67743913 | None:intergenic | 20.0% |
| !! | TGAATTGGACAAAAAATTAT+AGG | + | chr3_4:67744191-67744210 | None:intergenic | 20.0% |
| !!! | AATTTAAAGTGACTTATGTT+TGG | + | chr3_4:67744231-67744250 | None:intergenic | 20.0% |
| ! | GATAGATAGATAGATAGATA+TGG | + | chr3_4:67737932-67737951 | None:intergenic | 25.0% |
| !!! | AAATATCAATTTTTTGCGTG+TGG | - | chr3_4:67738216-67738235 | Msa0516240:CDS | 25.0% |
| !! | ATTATGAAGAGACTTTGAAA+TGG | - | chr3_4:67738321-67738340 | Msa0516240:CDS | 25.0% |
| !!! | TTATGAAGAGACTTTGAAAT+GGG | - | chr3_4:67738322-67738341 | Msa0516240:CDS | 25.0% |
| !!! | AAAGACTTTTTGGGATAATA+TGG | + | chr3_4:67738382-67738401 | None:intergenic | 25.0% |
| ! | AGACACATATCAATTTAAAC+TGG | + | chr3_4:67738461-67738480 | None:intergenic | 25.0% |
| !!! | AATGTAAAGTGATTTTGGTT+TGG | + | chr3_4:67738739-67738758 | None:intergenic | 25.0% |
| !! | AGTTGAATGTAAAGTGATTT+TGG | + | chr3_4:67738744-67738763 | None:intergenic | 25.0% |
| ! | ATGAATAATTCATCTACCAT+TGG | + | chr3_4:67738919-67738938 | None:intergenic | 25.0% |
| ! | ATGAATGTTATTAATACGGT+AGG | - | chr3_4:67739007-67739026 | Msa0516240:intron | 25.0% |
| ! | TAAGAAATCAAACTATCATC+TGG | + | chr3_4:67739290-67739309 | None:intergenic | 25.0% |
| !!! | TACTGTCTTCTGTTTTTATT+CGG | - | chr3_4:67739616-67739635 | Msa0516240:CDS | 25.0% |
| ! | ATTTGTAATTAAAGTCTGGT+AGG | - | chr3_4:67739682-67739701 | Msa0516240:CDS | 25.0% |
| ! | ATTGAAAAGGGATAAAAAAC+CGG | + | chr3_4:67739773-67739792 | None:intergenic | 25.0% |
| !!! | TCTTATACTCAAGTTTGTTA+TGG | - | chr3_4:67740329-67740348 | Msa0516240:CDS | 25.0% |
| ! | ATATAAAGTATGTATACGTC+GGG | + | chr3_4:67740759-67740778 | None:intergenic | 25.0% |
| ! | GATATAAAGTATGTATACGT+CGG | + | chr3_4:67740760-67740779 | None:intergenic | 25.0% |
| !!! | TCAAAAGTTTCAAAAGTGTT+TGG | - | chr3_4:67740806-67740825 | Msa0516240:intron | 25.0% |
| ! | CAAACTTAATGAAATTTAGC+AGG | + | chr3_4:67740840-67740859 | None:intergenic | 25.0% |
| ! | CTGCTAAATTTCATTAAGTT+TGG | - | chr3_4:67740838-67740857 | Msa0516240:intron | 25.0% |
| ! | TAGAATTTATTCAACAAGGA+TGG | + | chr3_4:67740869-67740888 | None:intergenic | 25.0% |
| ! | ATCCTTGTTGAATAAATTCT+AGG | - | chr3_4:67740868-67740887 | Msa0516240:intron | 25.0% |
| ! | TCCTTGTTGAATAAATTCTA+GGG | - | chr3_4:67740869-67740888 | Msa0516240:intron | 25.0% |
| ! | CAATCTTTAGTAGTATTCTA+TGG | - | chr3_4:67740893-67740912 | Msa0516240:intron | 25.0% |
| ! | AAACATAGAAAAACTGTCAT+TGG | + | chr3_4:67741012-67741031 | None:intergenic | 25.0% |
| ! | ATTATTTACTCTATGATTGC+TGG | - | chr3_4:67741259-67741278 | Msa0516240:intron | 25.0% |
| !! | GTTTTGTGAATATTTTACCT+AGG | - | chr3_4:67741281-67741300 | Msa0516240:intron | 25.0% |
| !!! | TGTTTATGATTGATTTGTAC+CGG | - | chr3_4:67741654-67741673 | Msa0516240:intron | 25.0% |
| ! | GAAATTGATACAAAACAATG+TGG | + | chr3_4:67741687-67741706 | None:intergenic | 25.0% |
| ! | ATAACTATGAATCTGATGTT+AGG | - | chr3_4:67741736-67741755 | Msa0516240:intron | 25.0% |
| ! | ATAAATGAATACAAAACCTG+GGG | + | chr3_4:67741777-67741796 | None:intergenic | 25.0% |
| ! | GAATAAATGAATACAAAACC+TGG | + | chr3_4:67741779-67741798 | None:intergenic | 25.0% |
| ! | TATATCTGTCCTCTATTTAA+AGG | - | chr3_4:67741818-67741837 | Msa0516240:intron | 25.0% |
| !!! | GTTTTGACATTCATTTACAA+AGG | - | chr3_4:67741864-67741883 | Msa0516240:intron | 25.0% |
| ! | GTTAAAATAGGAAAGTAATG+AGG | + | chr3_4:67742447-67742466 | None:intergenic | 25.0% |
| !!! | ACATTAATCATGGTTTTGTA+AGG | + | chr3_4:67743523-67743542 | None:intergenic | 25.0% |
| ! | TTTACTTAGATGTGGTTAAA+TGG | - | chr3_4:67743805-67743824 | Msa0516240:CDS | 25.0% |
| ! | TTACTTAGATGTGGTTAAAT+GGG | - | chr3_4:67743806-67743825 | Msa0516240:CDS | 25.0% |
| ! | GCAAAATCCATATTTATACA+TGG | - | chr3_4:67743884-67743903 | Msa0516240:CDS | 25.0% |
| ! | TTTATACATGGAAAATGTTC+AGG | - | chr3_4:67743896-67743915 | Msa0516240:CDS | 25.0% |
| ! | ACAATCATTGAGTATACAAA+TGG | + | chr3_4:67743974-67743993 | None:intergenic | 25.0% |
| ! | TATACTCAATGATTGTTGAA+CGG | - | chr3_4:67743978-67743997 | Msa0516240:CDS | 25.0% |
| ! | CAAAACTTAACGTAAAAGAT+GGG | + | chr3_4:67744034-67744053 | None:intergenic | 25.0% |
| ! | ACAAAACTTAACGTAAAAGA+TGG | + | chr3_4:67744035-67744054 | None:intergenic | 25.0% |
| !!! | AAGTTTTGTTTCACTTTTGA+AGG | - | chr3_4:67744046-67744065 | Msa0516240:intron | 25.0% |
| ! | ACATTCATGTAAAAGTGAAT+TGG | + | chr3_4:67744206-67744225 | None:intergenic | 25.0% |
| !! | TTGATGAGAATGTACATTTT+CGG | - | chr3_4:67744758-67744777 | Msa0516240:intron | 25.0% |
| ! | TAAAAGAACTTAAACTACAC+TGG | + | chr3_4:67744981-67745000 | None:intergenic | 25.0% |
| ! | GACTAATAAAATGTGATGAT+CGG | + | chr3_4:67745115-67745134 | None:intergenic | 25.0% |
| !!! | ACATTTTATTAGTCTTCACA+TGG | - | chr3_4:67745121-67745140 | Msa0516240:five_prime_UTR | 25.0% |
| !! | TAGTACTTCTATTTTATTGC+TGG | - | chr3_4:67745205-67745224 | Msa0516240:five_prime_UTR | 25.0% |
| CAAGTTATTTATTCAGTTGG+TGG | + | chr3_4:67737970-67737989 | None:intergenic | 30.0% | |
| AGATTACAGACATGTTGAAT+TGG | + | chr3_4:67738040-67738059 | None:intergenic | 30.0% | |
| TTCCATAAACTGTTTACGAT+TGG | - | chr3_4:67738246-67738265 | Msa0516240:CDS | 30.0% | |
| ATCCAATCGTAAACAGTTTA+TGG | + | chr3_4:67738251-67738270 | None:intergenic | 30.0% | |
| TATGTGTCTGTCAATATCAA+AGG | - | chr3_4:67738472-67738491 | Msa0516240:CDS | 30.0% | |
| ATGTGTCTGTCAATATCAAA+GGG | - | chr3_4:67738473-67738492 | Msa0516240:CDS | 30.0% | |
| !!! | AAGGGAACTTTTTAGCTTTT+TGG | - | chr3_4:67738491-67738510 | Msa0516240:CDS | 30.0% |
| !!! | AGGGAACTTTTTAGCTTTTT+GGG | - | chr3_4:67738492-67738511 | Msa0516240:CDS | 30.0% |
| !!! | CAATTTTGCTATTCTAGAAG+TGG | + | chr3_4:67738571-67738590 | None:intergenic | 30.0% |
| !!! | TTAGTGTATGTTTGGTTTTG+GGG | + | chr3_4:67738822-67738841 | None:intergenic | 30.0% |
| !!! | CTTAGTGTATGTTTGGTTTT+GGG | + | chr3_4:67738823-67738842 | None:intergenic | 30.0% |
| !! | ACTTAGTGTATGTTTGGTTT+TGG | + | chr3_4:67738824-67738843 | None:intergenic | 30.0% |
| GACTTAAATGTGTTTGTAAG+AGG | + | chr3_4:67738892-67738911 | None:intergenic | 30.0% | |
| CTTACAAACACATTTAAGTC+AGG | - | chr3_4:67738892-67738911 | Msa0516240:intron | 30.0% | |
| !! | ATTGCAGTTCAGTTTTATAC+CGG | - | chr3_4:67739066-67739085 | Msa0516240:intron | 30.0% |
| !! | ATTAGTTGATGAATGAGAAG+AGG | - | chr3_4:67739111-67739130 | Msa0516240:intron | 30.0% |
| GGACTAAAACTTATTGAAGT+TGG | + | chr3_4:67739269-67739288 | None:intergenic | 30.0% | |
| TGATGAGAGTAATATTTCTC+CGG | - | chr3_4:67739409-67739428 | Msa0516240:intron | 30.0% | |
| GCACATTTGTAATTAAAGTC+TGG | - | chr3_4:67739678-67739697 | Msa0516240:CDS | 30.0% | |
| TTGAAAAGGGATAAAAAACC+GGG | + | chr3_4:67739772-67739791 | None:intergenic | 30.0% | |
| TGGCATTTATAAATCAGGTT+GGG | + | chr3_4:67740130-67740149 | None:intergenic | 30.0% | |
| ATGGCATTTATAAATCAGGT+TGG | + | chr3_4:67740131-67740150 | None:intergenic | 30.0% | |
| AACCTGATTTATAAATGCCA+TGG | - | chr3_4:67740130-67740149 | Msa0516240:CDS | 30.0% | |
| ATACAAAAAGGCAAGCATTA+TGG | + | chr3_4:67740291-67740310 | None:intergenic | 30.0% | |
| ATGGACATAAATCTGTTTGT+GGG | + | chr3_4:67740367-67740386 | None:intergenic | 30.0% | |
| ! | TTTTCGAATGGGAAATATCA+TGG | + | chr3_4:67740386-67740405 | None:intergenic | 30.0% |
| ATTAACAACTAACCAACTAC+TGG | + | chr3_4:67740579-67740598 | None:intergenic | 30.0% | |
| AAAATACACGTTAGCTACAA+AGG | + | chr3_4:67740682-67740701 | None:intergenic | 30.0% | |
| ACCCTAGAATTTATTCAACA+AGG | + | chr3_4:67740873-67740892 | None:intergenic | 30.0% | |
| ATAGAAAAACTGTCATTGGA+TGG | + | chr3_4:67741008-67741027 | None:intergenic | 30.0% | |
| TATCACCTGTGCTATATATT+CGG | + | chr3_4:67741102-67741121 | None:intergenic | 30.0% | |
| ! | TTTTCCCAATCAAAAGTAGA+AGG | + | chr3_4:67741209-67741228 | None:intergenic | 30.0% |
| ! | TAACAGTTTTTGTCTTGTGA+TGG | - | chr3_4:67741487-67741506 | Msa0516240:intron | 30.0% |
| AAGATAGAAAACGAGAGAAA+GGG | + | chr3_4:67741560-67741579 | None:intergenic | 30.0% | |
| !! | GTTTATGATTGATTTGTACC+GGG | - | chr3_4:67741655-67741674 | Msa0516240:intron | 30.0% |
| TTGATACAAAACAATGTGGA+TGG | + | chr3_4:67741683-67741702 | None:intergenic | 30.0% | |
| TAAATGAATACAAAACCTGG+GGG | + | chr3_4:67741776-67741795 | None:intergenic | 30.0% | |
| !! | ACTTTGATGATGTCATTTAC+AGG | - | chr3_4:67742272-67742291 | Msa0516240:intron | 30.0% |
| ! | ACGTGTAATTTTCTGATTTC+AGG | - | chr3_4:67742511-67742530 | Msa0516240:intron | 30.0% |
| ! | TGTAATTTTCTGATTTCAGG+AGG | - | chr3_4:67742514-67742533 | Msa0516240:intron | 30.0% |
| TTGATATTAGAACAGGACAA+AGG | - | chr3_4:67742894-67742913 | Msa0516240:intron | 30.0% | |
| ! | TGTTTCACACCTTTTGATAA+AGG | - | chr3_4:67742965-67742984 | Msa0516240:intron | 30.0% |
| ! | TTGGTAACTCCTTTATCAAA+AGG | + | chr3_4:67742977-67742996 | None:intergenic | 30.0% |
| CTCTATATTCATGATGCAAA+CGG | - | chr3_4:67743046-67743065 | Msa0516240:intron | 30.0% | |
| TCTATATTCATGATGCAAAC+GGG | - | chr3_4:67743047-67743066 | Msa0516240:intron | 30.0% | |
| AGTGAAATATATTAGACCTG+TGG | + | chr3_4:67743137-67743156 | None:intergenic | 30.0% | |
| ACAGGTCTAATATATTTCAC+TGG | - | chr3_4:67743136-67743155 | Msa0516240:intron | 30.0% | |
| CAGGTCTAATATATTTCACT+GGG | - | chr3_4:67743137-67743156 | Msa0516240:intron | 30.0% | |
| AAGTTTAGCACAGTATAAGT+TGG | + | chr3_4:67743185-67743204 | None:intergenic | 30.0% | |
| ! | TGTGCTAAACTTTTCATTGA+TGG | - | chr3_4:67743193-67743212 | Msa0516240:intron | 30.0% |
| !!! | AGCTTTTTGGATTTTGGAAT+TGG | + | chr3_4:67743400-67743419 | None:intergenic | 30.0% |
| !!! | TTAATCATGGTTTTGTAAGG+TGG | + | chr3_4:67743520-67743539 | None:intergenic | 30.0% |
| ACCATGATTAATGTTTATGG+TGG | - | chr3_4:67743529-67743548 | Msa0516240:intron | 30.0% | |
| ACCACCATAAACATTAATCA+TGG | + | chr3_4:67743533-67743552 | None:intergenic | 30.0% | |
| !! | GAAATAAAGGCATCTTAGTT+TGG | - | chr3_4:67743617-67743636 | Msa0516240:CDS | 30.0% |
| GATAAAACACATACATGTGT+TGG | - | chr3_4:67743739-67743758 | Msa0516240:CDS | 30.0% | |
| GTTGCACAAATTCAATGTAT+TGG | + | chr3_4:67743772-67743791 | None:intergenic | 30.0% | |
| CTAAGTAAACCAAGGTTTAA+AGG | + | chr3_4:67743794-67743813 | None:intergenic | 30.0% | |
| ! | CTAAAGTATTTGCTCAAAGA+CGG | - | chr3_4:67743832-67743851 | Msa0516240:CDS | 30.0% |
| AAACAAATTCTGTCACTGTT+AGG | + | chr3_4:67743922-67743941 | None:intergenic | 30.0% | |
| AAATGGAAATATCACATGCA+GGG | + | chr3_4:67743957-67743976 | None:intergenic | 30.0% | |
| GACAAGAACCTATGAATTTA+AGG | + | chr3_4:67744012-67744031 | None:intergenic | 30.0% | |
| !! | TTTTGTTTCACTTTTGAAGG+AGG | - | chr3_4:67744049-67744068 | Msa0516240:intron | 30.0% |
| AGGAGGCAAAATTTATTCTA+AGG | - | chr3_4:67744066-67744085 | Msa0516240:intron | 30.0% | |
| GGAGGCAAAATTTATTCTAA+GGG | - | chr3_4:67744067-67744086 | Msa0516240:intron | 30.0% | |
| !! | CAAAATCACTGTTTGATTTG+CGG | + | chr3_4:67744309-67744328 | None:intergenic | 30.0% |
| GAAATCTGGATATCTTGAAA+GGG | + | chr3_4:67744566-67744585 | None:intergenic | 30.0% | |
| AGAAATCTGGATATCTTGAA+AGG | + | chr3_4:67744567-67744586 | None:intergenic | 30.0% | |
| ATTCTACACAGAGAAATACA+TGG | - | chr3_4:67744639-67744658 | Msa0516240:intron | 30.0% | |
| TTCTACACAGAGAAATACAT+GGG | - | chr3_4:67744640-67744659 | Msa0516240:intron | 30.0% | |
| TTGCCATCTGAAAATAAATC+AGG | - | chr3_4:67744664-67744683 | Msa0516240:intron | 30.0% | |
| TGCCATCTGAAAATAAATCA+GGG | - | chr3_4:67744665-67744684 | Msa0516240:intron | 30.0% | |
| !! | TACCCTGATTTATTTTCAGA+TGG | + | chr3_4:67744670-67744689 | None:intergenic | 30.0% |
| ATATAGCGATCGAGTTTATA+TGG | - | chr3_4:67744870-67744889 | Msa0516240:intron | 30.0% | |
| CTAATCAGTTATGAGACAAT+TGG | + | chr3_4:67745024-67745043 | None:intergenic | 30.0% | |
| ! | GGCTTTTCATTTCATTATAC+AGG | - | chr3_4:67745074-67745093 | Msa0516240:intron | 30.0% |
| GCTTCTCTTCATTTAATGAT+TGG | - | chr3_4:67745227-67745246 | Msa0516240:five_prime_UTR | 30.0% | |
| TATACTAACCTTCGATTCAT+AGG | + | chr3_4:67745262-67745281 | None:intergenic | 30.0% | |
| AATCGAAGGTTAGTATAACT+AGG | - | chr3_4:67745265-67745284 | Msa0516240:five_prime_UTR | 30.0% | |
| AAGGTTAGTATAACTAGGAT+TGG | - | chr3_4:67745270-67745289 | Msa0516240:five_prime_UTR | 30.0% | |
| TTGGATTGTCTTCAAGTGAA+AGG | + | chr3_4:67738021-67738040 | None:intergenic | 35.0% | |
| GTCTAATTAACCACTGCAAT+CGG | + | chr3_4:67738274-67738293 | None:intergenic | 35.0% | |
| !!! | AGAGACTTTGAAATGGGTTT+TGG | - | chr3_4:67738328-67738347 | Msa0516240:CDS | 35.0% |
| !!! | GAGACTTTGAAATGGGTTTT+GGG | - | chr3_4:67738329-67738348 | Msa0516240:CDS | 35.0% |
| !!! | AGACTTTGAAATGGGTTTTG+GGG | - | chr3_4:67738330-67738349 | Msa0516240:CDS | 35.0% |
| !!! | TACTTTTTTGTGGCATGAAC+TGG | - | chr3_4:67738353-67738372 | Msa0516240:CDS | 35.0% |
| GTTTGTAAGAGGCAACTTAT+AGG | + | chr3_4:67738881-67738900 | None:intergenic | 35.0% | |
| TTTCTCCGGAAGAAAAATTG+AGG | - | chr3_4:67739423-67739442 | Msa0516240:intron | 35.0% | |
| TGAAAAGGGATAAAAAACCG+GGG | + | chr3_4:67739771-67739790 | None:intergenic | 35.0% | |
| GTTAACACTTGGTATGTACT+AGG | + | chr3_4:67739856-67739875 | None:intergenic | 35.0% | |
| TACATACCAAGTGTTAACGA+TGG | - | chr3_4:67739858-67739877 | Msa0516240:CDS | 35.0% | |
| ATTGAACCATCGTTAACACT+TGG | + | chr3_4:67739867-67739886 | None:intergenic | 35.0% | |
| AAATGAAATCAATTGCCAGC+TGG | + | chr3_4:67740005-67740024 | None:intergenic | 35.0% | |
| !! | TTATAAATCAGGTTGGGCTT+AGG | + | chr3_4:67740124-67740143 | None:intergenic | 35.0% |
| TGCCATGGCATTTATAAATC+AGG | + | chr3_4:67740135-67740154 | None:intergenic | 35.0% | |
| CATGGACATAAATCTGTTTG+TGG | + | chr3_4:67740368-67740387 | None:intergenic | 35.0% | |
| TTAGCTACAAAGGCTACATT+TGG | + | chr3_4:67740672-67740691 | None:intergenic | 35.0% | |
| CTCGACTGTGTTAATTCATT+TGG | - | chr3_4:67740952-67740971 | Msa0516240:intron | 35.0% | |
| ! | CTTTTAGATAGTCTCGTTTC+TGG | - | chr3_4:67741034-67741053 | Msa0516240:intron | 35.0% |
| ATTTGTGTATTGCAGACTCA+CGG | - | chr3_4:67741071-67741090 | Msa0516240:intron | 35.0% | |
| !! | TCCTTCCTTCTACTTTTGAT+TGG | - | chr3_4:67741201-67741220 | Msa0516240:intron | 35.0% |
| !! | CCTTCCTTCTACTTTTGATT+GGG | - | chr3_4:67741202-67741221 | Msa0516240:intron | 35.0% |
| ! | ATTTTGTATGCGATCCAACT+CGG | + | chr3_4:67741387-67741406 | None:intergenic | 35.0% |
| AGTTGGATCGCATACAAAAT+CGG | - | chr3_4:67741387-67741406 | Msa0516240:intron | 35.0% | |
| GAAGATAGAAAACGAGAGAA+AGG | + | chr3_4:67741561-67741580 | None:intergenic | 35.0% | |
| ! | ATGACATATCCTGATTCGAA+AGG | - | chr3_4:67741592-67741611 | Msa0516240:intron | 35.0% |
| ! | TGACATATCCTGATTCGAAA+GGG | - | chr3_4:67741593-67741612 | Msa0516240:intron | 35.0% |
| AAAAAAGACCCTTTCGAATC+AGG | + | chr3_4:67741604-67741623 | None:intergenic | 35.0% | |
| ATTTACAAAGGCAAAGCATG+CGG | - | chr3_4:67741876-67741895 | Msa0516240:intron | 35.0% | |
| AAAGACACAAACCATTCACA+GGG | + | chr3_4:67742489-67742508 | None:intergenic | 35.0% | |
| AAAAGACACAAACCATTCAC+AGG | + | chr3_4:67742490-67742509 | None:intergenic | 35.0% | |
| ! | TGGTGCATAATTCTGAAAAG+CGG | + | chr3_4:67742620-67742639 | None:intergenic | 35.0% |
| ! | CTTTTCAGAATTATGCACCA+AGG | - | chr3_4:67742620-67742639 | Msa0516240:CDS | 35.0% |
| AGACAACGAGGATGAATATT+TGG | - | chr3_4:67742790-67742809 | Msa0516240:intron | 35.0% | |
| AGGACAAAGGAGAGATATAT+TGG | - | chr3_4:67742907-67742926 | Msa0516240:intron | 35.0% | |
| TGGTAGAAGAGAACAAAACT+TGG | - | chr3_4:67742927-67742946 | Msa0516240:intron | 35.0% | |
| ! | AAAGGAGTTACCAAGTTTTC+AGG | - | chr3_4:67742983-67743002 | Msa0516240:intron | 35.0% |
| GATAAATCCACCTGAAAACT+TGG | + | chr3_4:67742996-67743015 | None:intergenic | 35.0% | |
| !!! | AGTTTTCAGGTGGATTTATC+TGG | - | chr3_4:67742996-67743015 | Msa0516240:intron | 35.0% |
| !!! | GTTTTCAGGTGGATTTATCT+GGG | - | chr3_4:67742997-67743016 | Msa0516240:intron | 35.0% |
| ! | CAGTATAAGTTGGATTCAAG+AGG | + | chr3_4:67743175-67743194 | None:intergenic | 35.0% |
| AACGAACATAGTAATACCCT+AGG | + | chr3_4:67743334-67743353 | None:intergenic | 35.0% | |
| GGTATTACTATGTTCGTTAG+AGG | - | chr3_4:67743336-67743355 | Msa0516240:intron | 35.0% | |
| TTACTATGTTCGTTAGAGGA+TGG | - | chr3_4:67743340-67743359 | Msa0516240:intron | 35.0% | |
| ! | AGGTGAAGCTTTTTGGATTT+TGG | + | chr3_4:67743406-67743425 | None:intergenic | 35.0% |
| TGTATTTCAACAATCTCTGG+AGG | + | chr3_4:67743433-67743452 | None:intergenic | 35.0% | |
| GACTGTATTTCAACAATCTC+TGG | + | chr3_4:67743436-67743455 | None:intergenic | 35.0% | |
| GCGCAATACTTGAGAAATAA+AGG | - | chr3_4:67743604-67743623 | Msa0516240:CDS | 35.0% | |
| !! | TAAAGGCATCTTAGTTTGGA+AGG | - | chr3_4:67743621-67743640 | Msa0516240:CDS | 35.0% |
| TTTGTGCAACCTTTAAACCT+TGG | - | chr3_4:67743782-67743801 | Msa0516240:CDS | 35.0% | |
| AACCTTGGTTTACTTAGATG+TGG | - | chr3_4:67743797-67743816 | Msa0516240:CDS | 35.0% | |
| AACCACATCTAAGTAAACCA+AGG | + | chr3_4:67743802-67743821 | None:intergenic | 35.0% | |
| AATGGAAATATCACATGCAG+GGG | + | chr3_4:67743956-67743975 | None:intergenic | 35.0% | |
| CAAATGGAAATATCACATGC+AGG | + | chr3_4:67743958-67743977 | None:intergenic | 35.0% | |
| CTCTGATGCCTTAAATTCAT+AGG | - | chr3_4:67744001-67744020 | Msa0516240:exon | 35.0% | |
| ! | GGCTATTTAAAGCACAAACT+TGG | - | chr3_4:67744421-67744440 | Msa0516240:intron | 35.0% |
| ! | AAAAATGGGCTTGCAGAATT+TGG | - | chr3_4:67744490-67744509 | Msa0516240:intron | 35.0% |
| TTGCAGAATTTGGTCACATT+GGG | - | chr3_4:67744500-67744519 | Msa0516240:intron | 35.0% | |
| ATAGCACACTTGAAGAAATC+TGG | + | chr3_4:67744580-67744599 | None:intergenic | 35.0% | |
| ATCGAGTTTATATGGAAGAG+AGG | - | chr3_4:67744878-67744897 | Msa0516240:intron | 35.0% | |
| TTTATATGGAAGAGAGGATG+TGG | - | chr3_4:67744884-67744903 | Msa0516240:intron | 35.0% | |
| TTATATGGAAGAGAGGATGT+GGG | - | chr3_4:67744885-67744904 | Msa0516240:intron | 35.0% | |
| ! | GCTACTTTACTCAAGATAAC+TGG | - | chr3_4:67745043-67745062 | Msa0516240:intron | 35.0% |
| TGAAATCTAACCTGAGTTCG+TGG | + | chr3_4:67738167-67738186 | None:intergenic | 40.0% | |
| !!! | GGTTTTGGGGTACTTTTTTG+TGG | - | chr3_4:67738343-67738362 | Msa0516240:CDS | 40.0% |
| CACATTTAAGTCAGGTCCAA+TGG | - | chr3_4:67738900-67738919 | Msa0516240:intron | 40.0% | |
| !! | ACAGGCATTTTGAAAGGAAG+TGG | + | chr3_4:67739155-67739174 | None:intergenic | 40.0% |
| ! | TCTGTCACAGGCATTTTGAA+AGG | + | chr3_4:67739161-67739180 | None:intergenic | 40.0% |
| ACATCATTGAAGTCTGTCAC+AGG | + | chr3_4:67739173-67739192 | None:intergenic | 40.0% | |
| GATGTGCAAAATCTTGACGA+CGG | - | chr3_4:67739188-67739207 | Msa0516240:intron | 40.0% | |
| TATTGCGCAATCTCTTCAAC+CGG | + | chr3_4:67739224-67739243 | None:intergenic | 40.0% | |
| !! | GAAGTTGGTGATACATATCC+CGG | + | chr3_4:67739254-67739273 | None:intergenic | 40.0% |
| TCCGGAAGAAAAATTGAGGA+GGG | - | chr3_4:67739427-67739446 | Msa0516240:intron | 40.0% | |
| ! | TCCCTCCTCAATTTTTCTTC+CGG | + | chr3_4:67739431-67739450 | None:intergenic | 40.0% |
| AAGAAAAATTGAGGAGGGAG+AGG | - | chr3_4:67739432-67739451 | Msa0516240:intron | 40.0% | |
| CTCTGCACCTCATTAAAAAG+AGG | - | chr3_4:67739955-67739974 | Msa0516240:CDS | 40.0% | |
| TGCACCTCATTAAAAAGAGG+AGG | - | chr3_4:67739958-67739977 | Msa0516240:CDS | 40.0% | |
| GCACCTCATTAAAAAGAGGA+GGG | - | chr3_4:67739959-67739978 | Msa0516240:CDS | 40.0% | |
| ! | AGTCCCTCCTCTTTTTAATG+AGG | + | chr3_4:67739965-67739984 | None:intergenic | 40.0% |
| AAAAACTACTGTAGCTGCCA+TGG | + | chr3_4:67740150-67740169 | None:intergenic | 40.0% | |
| CTCTTACAGTAGTATCACAG+TGG | + | chr3_4:67740209-67740228 | None:intergenic | 40.0% | |
| ! | CTTGAGCTCTGTTTTCGAAT+GGG | + | chr3_4:67740397-67740416 | None:intergenic | 40.0% |
| GACAGATGAGGGTCAATAAT+GGG | + | chr3_4:67740441-67740460 | None:intergenic | 40.0% | |
| AGACAGATGAGGGTCAATAA+TGG | + | chr3_4:67740442-67740461 | None:intergenic | 40.0% | |
| TAAGCAAGCATAGATCCATC+TGG | + | chr3_4:67740465-67740484 | None:intergenic | 40.0% | |
| AAGGCTACATTTGGTTGTCA+GGG | + | chr3_4:67740663-67740682 | None:intergenic | 40.0% | |
| AAAGGCTACATTTGGTTGTC+AGG | + | chr3_4:67740664-67740683 | None:intergenic | 40.0% | |
| ATGGTCTGTTTGATGTGTTG+TGG | - | chr3_4:67740721-67740740 | Msa0516240:intron | 40.0% | |
| TTTGTGTATTGCAGACTCAC+GGG | - | chr3_4:67741072-67741091 | Msa0516240:intron | 40.0% | |
| CCCAATCAAAAGTAGAAGGA+AGG | + | chr3_4:67741205-67741224 | None:intergenic | 40.0% | |
| !! | ACCTAGGTTTTGTAGTACCA+AGG | - | chr3_4:67741297-67741316 | Msa0516240:intron | 40.0% |
| TCGCATACAAAATCGGATTC+TGG | - | chr3_4:67741394-67741413 | Msa0516240:intron | 40.0% | |
| AAATCGGATTCTGGTGAGAT+CGG | - | chr3_4:67741403-67741422 | Msa0516240:intron | 40.0% | |
| AGGATATGTCATCACTGAGA+GGG | + | chr3_4:67741584-67741603 | None:intergenic | 40.0% | |
| !!! | ATTTTTTGCAGCCCTGTGAA+TGG | - | chr3_4:67742475-67742494 | Msa0516240:intron | 40.0% |
| TTTCTGATTTCAGGAGGAGA+TGG | - | chr3_4:67742520-67742539 | Msa0516240:intron | 40.0% | |
| TGGATAGGAAAACTGGATAC+TGG | - | chr3_4:67742540-67742559 | Msa0516240:intron | 40.0% | |
| ATAGGAAAACTGGATACTGG+TGG | - | chr3_4:67742543-67742562 | Msa0516240:intron | 40.0% | |
| TCAAATGCTAAAATGCGCCT+AGG | - | chr3_4:67742701-67742720 | Msa0516240:CDS | 40.0% | |
| CAAATGCTAAAATGCGCCTA+GGG | - | chr3_4:67742702-67742721 | Msa0516240:CDS | 40.0% | |
| AAATGCTAAAATGCGCCTAG+GGG | - | chr3_4:67742703-67742722 | Msa0516240:CDS | 40.0% | |
| TGTGAAAGAACTAGACAACG+AGG | - | chr3_4:67742778-67742797 | Msa0516240:intron | 40.0% | |
| TCACTGCTCAGATCATAAAC+AGG | - | chr3_4:67742843-67742862 | Msa0516240:intron | 40.0% | |
| ATCCATTCACCTTCAGTGAT+GGG | + | chr3_4:67743085-67743104 | None:intergenic | 40.0% | |
| GGATTCAAGAGGACTATCTA+AGG | + | chr3_4:67743164-67743183 | None:intergenic | 40.0% | |
| ATGTTCGCATGTGATGATCA+AGG | + | chr3_4:67743279-67743298 | None:intergenic | 40.0% | |
| GAACATAGTAATACCCTAGG+TGG | + | chr3_4:67743331-67743350 | None:intergenic | 40.0% | |
| ! | GGTATTTGCTGCTCATACAA+AGG | + | chr3_4:67743379-67743398 | None:intergenic | 40.0% |
| ATACAAGGTAGTACCATCGT+CGG | + | chr3_4:67743458-67743477 | None:intergenic | 40.0% | |
| CTTGTAAAGAGCTCCATACA+AGG | + | chr3_4:67743473-67743492 | None:intergenic | 40.0% | |
| AAGCCTGATGCTTCAAGATT+CGG | - | chr3_4:67743490-67743509 | Msa0516240:intron | 40.0% | |
| !!! | ATCATGGTTTTGTAAGGTGG+AGG | + | chr3_4:67743517-67743536 | None:intergenic | 40.0% |
| TTAGAAACGAGCTGTACACT+TGG | + | chr3_4:67743556-67743575 | None:intergenic | 40.0% | |
| TACAGCTCGTTTCTAACTCT+TGG | - | chr3_4:67743560-67743579 | Msa0516240:intron | 40.0% | |
| TAAAAGCAAGCAAGACAGAC+AGG | + | chr3_4:67743681-67743700 | None:intergenic | 40.0% | |
| ! | AACACATACATGTGTTGGCA+TGG | - | chr3_4:67743744-67743763 | Msa0516240:CDS | 40.0% |
| TGTTGACAGTTAGACAACAG+AGG | - | chr3_4:67744370-67744389 | Msa0516240:intron | 40.0% | |
| ACAACAGAGGAACTTCTAGA+CGG | - | chr3_4:67744383-67744402 | Msa0516240:intron | 40.0% | |
| GATGCTGATGATCAGTTTAC+TGG | - | chr3_4:67744451-67744470 | Msa0516240:intron | 40.0% | |
| ! | CAGAGTGGCTTGTCAAAAAT+GGG | - | chr3_4:67744476-67744495 | Msa0516240:intron | 40.0% |
| CTTGCAGAATTTGGTCACAT+TGG | - | chr3_4:67744499-67744518 | Msa0516240:intron | 40.0% | |
| ! | TTTGGTCACATTGGGTTGTA+CGG | - | chr3_4:67744508-67744527 | Msa0516240:intron | 40.0% |
| TTCTTCAAGTGTGCTATAGC+TGG | - | chr3_4:67744583-67744602 | Msa0516240:intron | 40.0% | |
| AAGGCTTATCAATGCACTTG+TGG | - | chr3_4:67744789-67744808 | Msa0516240:intron | 40.0% | |
| ATGAAATGAAAAGCCCCAGA+TGG | + | chr3_4:67745069-67745088 | None:intergenic | 40.0% | |
| CAAGACTTCCTATGAATCGA+AGG | - | chr3_4:67745251-67745270 | Msa0516240:five_prime_UTR | 40.0% | |
| AATCTAACCTGAGTTCGTGG+TGG | + | chr3_4:67738164-67738183 | None:intergenic | 45.0% | |
| ! | TAATACGGTAGGCGTTGTCT+TGG | - | chr3_4:67739018-67739037 | Msa0516240:intron | 45.0% |
| ! | AATACGGTAGGCGTTGTCTT+GGG | - | chr3_4:67739019-67739038 | Msa0516240:intron | 45.0% |
| !! | GCAGTTCAGTTTTATACCGG+AGG | - | chr3_4:67739069-67739088 | Msa0516240:intron | 45.0% |
| TCGCATTACACAAACACCTC+CGG | + | chr3_4:67739088-67739107 | None:intergenic | 45.0% | |
| ! | GAAGTGGTTTTTGACGCTTC+GGG | + | chr3_4:67739139-67739158 | None:intergenic | 45.0% |
| ! | GGAAGTGGTTTTTGACGCTT+CGG | + | chr3_4:67739140-67739159 | None:intergenic | 45.0% |
| ATTGCGCAATCTCTTCAACC+GGG | + | chr3_4:67739223-67739242 | None:intergenic | 45.0% | |
| GATTGCGCAATATCCATTGC+CGG | - | chr3_4:67739232-67739251 | Msa0516240:intron | 45.0% | |
| ATTGCGCAATATCCATTGCC+GGG | - | chr3_4:67739233-67739252 | Msa0516240:intron | 45.0% | |
| !! | TTGTTATTTAGCCCGCCTGA+TGG | - | chr3_4:67739380-67739399 | Msa0516240:intron | 45.0% |
| CTCCGGAAGAAAAATTGAGG+AGG | - | chr3_4:67739426-67739445 | Msa0516240:intron | 45.0% | |
| GGGTGAAGACGAACTCAAAA+AGG | - | chr3_4:67739492-67739511 | Msa0516240:CDS | 45.0% | |
| CTCAAAAAGGAAAGCAGTCC+TGG | - | chr3_4:67739505-67739524 | Msa0516240:CDS | 45.0% | |
| TAACTAACCCCAGCAGGTAA+CGG | + | chr3_4:67739533-67739552 | None:intergenic | 45.0% | |
| AGAAAGTAACTAACCCCAGC+AGG | + | chr3_4:67739539-67739558 | None:intergenic | 45.0% | |
| GGAGGTCATGGTGAGATTAA+TGG | + | chr3_4:67739750-67739769 | None:intergenic | 45.0% | |
| ATAAAAAACCGGGGAGGTCA+TGG | + | chr3_4:67739762-67739781 | None:intergenic | 45.0% | |
| AAAGGGATAAAAAACCGGGG+AGG | + | chr3_4:67739768-67739787 | None:intergenic | 45.0% | |
| ! | TTTTATCCCATCAGTGCCAC+TGG | - | chr3_4:67740166-67740185 | Msa0516240:CDS | 45.0% |
| ! | GCTTGAGCTCTGTTTTCGAA+TGG | + | chr3_4:67740398-67740417 | None:intergenic | 45.0% |
| ATCCATCTGGAGACAGATGA+GGG | + | chr3_4:67740452-67740471 | None:intergenic | 45.0% | |
| GAATCAAAGCAGTTGACCCA+TGG | - | chr3_4:67740528-67740547 | Msa0516240:CDS | 45.0% | |
| ACCCATGGTGCAAAGGAAAA+TGG | - | chr3_4:67740543-67740562 | Msa0516240:CDS | 45.0% | |
| !! | GCCATTTTCCTTTGCACCAT+GGG | + | chr3_4:67740547-67740566 | None:intergenic | 45.0% |
| !! | AGCCATTTTCCTTTGCACCA+TGG | + | chr3_4:67740548-67740567 | None:intergenic | 45.0% |
| ! | GGCTTTGTAAGTCCAGTAGT+TGG | - | chr3_4:67740564-67740583 | Msa0516240:CDS | 45.0% |
| AGGCTACATTTGGTTGTCAG+GGG | + | chr3_4:67740662-67740681 | None:intergenic | 45.0% | |
| GCTTGCCGAATATATAGCAC+AGG | - | chr3_4:67741094-67741113 | Msa0516240:intron | 45.0% | |
| GCCTTGGTACTACAAAACCT+AGG | + | chr3_4:67741301-67741320 | None:intergenic | 45.0% | |
| AAACGAGAGAAAGGGCAGAA+TGG | + | chr3_4:67741552-67741571 | None:intergenic | 45.0% | |
| GGATATGTCATCACTGAGAG+GGG | + | chr3_4:67741583-67741602 | None:intergenic | 45.0% | |
| CAGGATATGTCATCACTGAG+AGG | + | chr3_4:67741585-67741604 | None:intergenic | 45.0% | |
| AAAACAATGTGGATGGCACC+CGG | + | chr3_4:67741676-67741695 | None:intergenic | 45.0% | |
| GATGTTAGGAACACCGTACT+AGG | - | chr3_4:67741750-67741769 | Msa0516240:intron | 45.0% | |
| GATTTCAGGAGGAGATGGAT+AGG | - | chr3_4:67742525-67742544 | Msa0516240:intron | 45.0% | |
| GAGGAGATGGATAGGAAAAC+TGG | - | chr3_4:67742533-67742552 | Msa0516240:intron | 45.0% | |
| ! | GACCATCCTTATCCTTTTGC+AGG | - | chr3_4:67742674-67742693 | Msa0516240:CDS | 45.0% |
| CTCCTGCAAAAGGATAAGGA+TGG | + | chr3_4:67742679-67742698 | None:intergenic | 45.0% | |
| GAAGCTCCTGCAAAAGGATA+AGG | + | chr3_4:67742683-67742702 | None:intergenic | 45.0% | |
| ! | GCATTTGAAGCTCCTGCAAA+AGG | + | chr3_4:67742689-67742708 | None:intergenic | 45.0% |
| ACAGACAAGATCCATCCAAG+TGG | + | chr3_4:67742753-67742772 | None:intergenic | 45.0% | |
| ACTTGGATGGATCTTGTCTG+TGG | - | chr3_4:67742752-67742771 | Msa0516240:intron | 45.0% | |
| CTTGGATGGATCTTGTCTGT+GGG | - | chr3_4:67742753-67742772 | Msa0516240:intron | 45.0% | |
| TTGGATGGATCTTGTCTGTG+GGG | - | chr3_4:67742754-67742773 | Msa0516240:intron | 45.0% | |
| !! | GGAGTTACCAAGTTTTCAGG+TGG | - | chr3_4:67742986-67743005 | Msa0516240:intron | 45.0% |
| !! | ATCTGGGCTAGTGAGAAATC+AGG | - | chr3_4:67743013-67743032 | Msa0516240:intron | 45.0% |
| ! | GATGCAAACGGGACTTGTTT+AGG | - | chr3_4:67743058-67743077 | Msa0516240:intron | 45.0% |
| ! | TGTTTAGGACCCATCACTGA+AGG | - | chr3_4:67743073-67743092 | Msa0516240:intron | 45.0% |
| CATCCATTCACCTTCAGTGA+TGG | + | chr3_4:67743086-67743105 | None:intergenic | 45.0% | |
| CATCACTGAAGGTGAATGGA+TGG | - | chr3_4:67743084-67743103 | Msa0516240:intron | 45.0% | |
| ! | TGCCATGTGTTAGTCTGGTA+GGG | + | chr3_4:67743237-67743256 | None:intergenic | 45.0% |
| ! | TTGCCATGTGTTAGTCTGGT+AGG | + | chr3_4:67743238-67743257 | None:intergenic | 45.0% |
| TACCAGACTAACACATGGCA+AGG | - | chr3_4:67743237-67743256 | Msa0516240:intron | 45.0% | |
| ACCAGACTAACACATGGCAA+GGG | - | chr3_4:67743238-67743257 | Msa0516240:intron | 45.0% | |
| TACCCTAGGTGGACAACTAA+GGG | + | chr3_4:67743320-67743339 | None:intergenic | 45.0% | |
| ATACCCTAGGTGGACAACTA+AGG | + | chr3_4:67743321-67743340 | None:intergenic | 45.0% | |
| ! | AGGCTCAAGGTGAAGCTTTT+TGG | + | chr3_4:67743413-67743432 | None:intergenic | 45.0% |
| GTTGAAATACAGTCCGACGA+TGG | - | chr3_4:67743442-67743461 | Msa0516240:intron | 45.0% | |
| GACGATGGTACTACCTTGTA+TGG | - | chr3_4:67743457-67743476 | Msa0516240:intron | 45.0% | |
| ! | TTCTCAAGTATTGCGCTCTC+AGG | + | chr3_4:67743600-67743619 | None:intergenic | 45.0% |
| CAACAGAGGAACTTCTAGAC+GGG | - | chr3_4:67744384-67744403 | Msa0516240:intron | 45.0% | |
| AACAGAGGAACTTCTAGACG+GGG | - | chr3_4:67744385-67744404 | Msa0516240:intron | 45.0% | |
| ATCAGTTTACTGGAGCAGAG+TGG | - | chr3_4:67744461-67744480 | Msa0516240:intron | 45.0% | |
| ! | GCAGAGTGGCTTGTCAAAAA+TGG | - | chr3_4:67744475-67744494 | Msa0516240:intron | 45.0% |
| TATCCATCCCACGATGTAAC+GGG | + | chr3_4:67744613-67744632 | None:intergenic | 45.0% | |
| GTATCCATCCCACGATGTAA+CGG | + | chr3_4:67744614-67744633 | None:intergenic | 45.0% | |
| TGAACCATGTGCACAAGATG+AGG | - | chr3_4:67744707-67744726 | Msa0516240:intron | 45.0% | |
| GAACCATGTGCACAAGATGA+GGG | - | chr3_4:67744708-67744727 | Msa0516240:intron | 45.0% | |
| AACCATGTGCACAAGATGAG+GGG | - | chr3_4:67744709-67744728 | Msa0516240:intron | 45.0% | |
| ! | GGAAGGTTGTTGATTGTGCA+TGG | - | chr3_4:67744730-67744749 | Msa0516240:intron | 45.0% |
| ! | TACATTTTCGGCACACTGCA+AGG | - | chr3_4:67744770-67744789 | Msa0516240:intron | 45.0% |
| GCTTATCAATGCACTTGTGG+CGG | - | chr3_4:67744792-67744811 | Msa0516240:intron | 45.0% | |
| GGATGTGGGAATTCATTGAC+AGG | - | chr3_4:67744899-67744918 | Msa0516240:intron | 45.0% | |
| ACTCAAGATAACTGGCCATC+TGG | - | chr3_4:67745051-67745070 | Msa0516240:intron | 45.0% | |
| CTCAAGATAACTGGCCATCT+GGG | - | chr3_4:67745052-67745071 | Msa0516240:intron | 45.0% | |
| TCAAGATAACTGGCCATCTG+GGG | - | chr3_4:67745053-67745072 | Msa0516240:intron | 45.0% | |
| CGAGCTAAAAGCAATGAGAG+AGG | + | chr3_4:67745169-67745188 | None:intergenic | 45.0% | |
| !!! | CTCTCATTGCTTTTAGCTCG+TGG | - | chr3_4:67745169-67745188 | Msa0516240:five_prime_UTR | 45.0% |
| !! | ATAAATTGAATAAATAAATA+AGG | - | chr3_4:67737876-67737895 | Msa0516240:three_prime_UTR | 5.0% |
| !! | TAAATTGAATAAATAAATAA+GGG | - | chr3_4:67737877-67737896 | Msa0516240:three_prime_UTR | 5.0% |
| !! | AATAAATAAATAAATAAATC+AGG | + | chr3_4:67740084-67740103 | None:intergenic | 5.0% |
| !!! | ATATATATATATATTCATTT+TGG | - | chr3_4:67742407-67742426 | Msa0516240:intron | 5.0% |
| ACGATTGGATCCGATTGCAG+TGG | - | chr3_4:67738261-67738280 | Msa0516240:CDS | 50.0% | |
| ! | TGACGACGGCATTCTTTTCC+CGG | - | chr3_4:67739202-67739221 | Msa0516240:intron | 50.0% |
| GGTGATACATATCCCGGCAA+TGG | + | chr3_4:67739248-67739267 | None:intergenic | 50.0% | |
| TTATTTAGCCCGCCTGATGG+CGG | - | chr3_4:67739383-67739402 | Msa0516240:intron | 50.0% | |
| AATTGAGGAGGGAGAGGTTG+AGG | - | chr3_4:67739438-67739457 | Msa0516240:intron | 50.0% | |
| ATTGAGGAGGGAGAGGTTGA+GGG | - | chr3_4:67739439-67739458 | Msa0516240:intron | 50.0% | |
| TAGGAGTGACACGATACGAG+TGG | - | chr3_4:67739471-67739490 | Msa0516240:intron | 50.0% | |
| AGGAGTGACACGATACGAGT+GGG | - | chr3_4:67739472-67739491 | Msa0516240:intron | 50.0% | |
| TAATCTCACCATGACCTCCC+CGG | - | chr3_4:67739751-67739770 | Msa0516240:CDS | 50.0% | |
| !! | TCACTACCAGTGGCACTGAT+GGG | + | chr3_4:67740175-67740194 | None:intergenic | 50.0% |
| ACAAGCCTAGTCACTACCAG+TGG | + | chr3_4:67740185-67740204 | None:intergenic | 50.0% | |
| ATGGGCGAAGCTGGTATACT+AGG | + | chr3_4:67740423-67740442 | None:intergenic | 50.0% | |
| GATCCATCTGGAGACAGATG+AGG | + | chr3_4:67740453-67740472 | None:intergenic | 50.0% | |
| GTGATCTTGACAACACGCCT+TGG | + | chr3_4:67741317-67741336 | None:intergenic | 50.0% | |
| AACTGGATACTGGTGGTCAC+TGG | - | chr3_4:67742550-67742569 | Msa0516240:intron | 50.0% | |
| CACCAAGGTAGAAGCTCAGT+TGG | - | chr3_4:67742635-67742654 | Msa0516240:CDS | 50.0% | |
| TGCCAACTGAGCTTCTACCT+TGG | + | chr3_4:67742640-67742659 | None:intergenic | 50.0% | |
| AATGCGCCTAGGGGTTGTTT+CGG | - | chr3_4:67742712-67742731 | Msa0516240:CDS | 50.0% | |
| GACAAGATCCATCCAAGTGG+TGG | + | chr3_4:67742750-67742769 | None:intergenic | 50.0% | |
| TGGATGGATCTTGTCTGTGG+GGG | - | chr3_4:67742755-67742774 | Msa0516240:intron | 50.0% | |
| GACCCATCACTGAAGGTGAA+TGG | - | chr3_4:67743080-67743099 | Msa0516240:intron | 50.0% | |
| TGGATGGTTGAGCAAATCGC+CGG | - | chr3_4:67743100-67743119 | Msa0516240:intron | 50.0% | |
| ! | GCCATGTGTTAGTCTGGTAG+GGG | + | chr3_4:67743236-67743255 | None:intergenic | 50.0% |
| TCCCTTGCCATGTGTTAGTC+TGG | + | chr3_4:67743242-67743261 | None:intergenic | 50.0% | |
| ACTCCCTTAGTTGTCCACCT+AGG | - | chr3_4:67743314-67743333 | Msa0516240:intron | 50.0% | |
| CTCCCTTAGTTGTCCACCTA+GGG | - | chr3_4:67743315-67743334 | Msa0516240:intron | 50.0% | |
| ! | CAACAATCTCTGGAGGCTCA+AGG | + | chr3_4:67743426-67743445 | None:intergenic | 50.0% |
| ! | GGTCCGAATCTTGAAGCATC+AGG | + | chr3_4:67743496-67743515 | None:intergenic | 50.0% |
| AGCAAGCAAGACAGACAGGA+GGG | + | chr3_4:67743677-67743696 | None:intergenic | 50.0% | |
| AAGCAAGCAAGACAGACAGG+AGG | + | chr3_4:67743678-67743697 | None:intergenic | 50.0% | |
| ACAGAGGAACTTCTAGACGG+GGG | - | chr3_4:67744386-67744405 | Msa0516240:intron | 50.0% | |
| AGACGGGGGTTGAAGTTTGA+AGG | - | chr3_4:67744400-67744419 | Msa0516240:intron | 50.0% | |
| ! | GTCACATTGGGTTGTACGGT+TGG | - | chr3_4:67744512-67744531 | Msa0516240:intron | 50.0% |
| TTGTACGGTTGGAGCTATGG+CGG | - | chr3_4:67744523-67744542 | Msa0516240:intron | 50.0% | |
| TTCCCCTCATCTTGTGCACA+TGG | + | chr3_4:67744714-67744733 | None:intergenic | 50.0% | |
| ATGTGCACAAGATGAGGGGA+AGG | - | chr3_4:67744713-67744732 | Msa0516240:intron | 50.0% | |
| ! | CCTGAGTTCGTGGTGGAAGA+TGG | + | chr3_4:67738157-67738176 | None:intergenic | 55.0% |
| CCATCTTCCACCACGAACTC+AGG | - | chr3_4:67738154-67738173 | Msa0516240:three_prime_UTR | 55.0% | |
| TCATCAAGTCCGCCATCAGG+CGG | + | chr3_4:67739395-67739414 | None:intergenic | 55.0% | |
| CTCTCATCAAGTCCGCCATC+AGG | + | chr3_4:67739398-67739417 | None:intergenic | 55.0% | |
| AGGTTGAGGGAACGCGGTTT+AGG | - | chr3_4:67739452-67739471 | Msa0516240:intron | 55.0% | |
| CCAGCTGGTGTAGCAGTAAG+TGG | + | chr3_4:67739990-67740009 | None:intergenic | 55.0% | |
| CCACTTACTGCTACACCAGC+TGG | - | chr3_4:67739987-67740006 | Msa0516240:CDS | 55.0% | |
| ! | GTCACTACCAGTGGCACTGA+TGG | + | chr3_4:67740176-67740195 | None:intergenic | 55.0% |
| ! | CAGTGCCACTGGTAGTGACT+AGG | - | chr3_4:67740177-67740196 | Msa0516240:CDS | 55.0% |
| !! | GGGTCAATAATGGGCGAAGC+TGG | + | chr3_4:67740432-67740451 | None:intergenic | 55.0% |
| GACCCTCATCTGTCTCCAGA+TGG | - | chr3_4:67740447-67740466 | Msa0516240:CDS | 55.0% | |
| GCAGTTGACCCATGGTGCAA+AGG | - | chr3_4:67740536-67740555 | Msa0516240:CDS | 55.0% | |
| TGCGATCCAACTCGGACAGA+GGG | + | chr3_4:67741379-67741398 | None:intergenic | 55.0% | |
| ATGCGATCCAACTCGGACAG+AGG | + | chr3_4:67741380-67741399 | None:intergenic | 55.0% | |
| TCAGCTCCGTCACGTTGCTA+GGG | - | chr3_4:67741512-67741531 | Msa0516240:intron | 55.0% | |
| GTCACACCCTAGCAACGTGA+CGG | + | chr3_4:67741521-67741540 | None:intergenic | 55.0% | |
| CGAGAGAAAGGGCAGAATGG+AGG | + | chr3_4:67741549-67741568 | None:intergenic | 55.0% | |
| CAAAACCTGGGGGCCTAGTA+CGG | + | chr3_4:67741766-67741785 | None:intergenic | 55.0% | |
| CTCAGTTGGCACAGATGCAC+AGG | - | chr3_4:67742649-67742668 | Msa0516240:CDS | 55.0% | |
| CAGCTACCGAAACAACCCCT+AGG | + | chr3_4:67742721-67742740 | None:intergenic | 55.0% | |
| ! | CTAGGGGTTGTTTCGGTAGC+TGG | - | chr3_4:67742719-67742738 | Msa0516240:CDS | 55.0% |
| GCAAATCGCCGGTGTGAATG+AGG | - | chr3_4:67743111-67743130 | Msa0516240:intron | 55.0% | |
| ACCTGTGGCCTCATTCACAC+CGG | + | chr3_4:67743122-67743141 | None:intergenic | 55.0% | |
| AGTCTGGTAGGGGCTTGAAG+TGG | + | chr3_4:67743226-67743245 | None:intergenic | 55.0% | |
| GCCCCTACCAGACTAACACA+TGG | - | chr3_4:67743232-67743251 | Msa0516240:intron | 55.0% | |
| GGGTTGTACGGTTGGAGCTA+TGG | - | chr3_4:67744520-67744539 | Msa0516240:intron | 55.0% | |
| TGTACGGTTGGAGCTATGGC+GGG | - | chr3_4:67744524-67744543 | Msa0516240:intron | 55.0% | |
| TGGTGCACCCGTTACATCGT+GGG | - | chr3_4:67744603-67744622 | Msa0516240:intron | 55.0% | |
| ATCAATGCACTTGTGGCGGC+TGG | - | chr3_4:67744796-67744815 | Msa0516240:intron | 55.0% | |
| ACTCGATCGCTATATCGCCG+AGG | + | chr3_4:67744865-67744884 | None:intergenic | 55.0% | |
| CATCAAGTCCGCCATCAGGC+GGG | + | chr3_4:67739394-67739413 | None:intergenic | 60.0% | |
| AGGGAGAGGTTGAGGGAACG+CGG | - | chr3_4:67739446-67739465 | Msa0516240:intron | 60.0% | |
| !! | TCCTGGTGCCGTTACCTGCT+GGG | - | chr3_4:67739522-67739541 | Msa0516240:CDS | 60.0% |
| CTTTCCCCCTCTGTCCGAGT+TGG | - | chr3_4:67741370-67741389 | Msa0516240:intron | 60.0% | |
| CGATCCAACTCGGACAGAGG+GGG | + | chr3_4:67741377-67741396 | None:intergenic | 60.0% | |
| GCGATCCAACTCGGACAGAG+GGG | + | chr3_4:67741378-67741397 | None:intergenic | 60.0% | |
| CTCAGCTCCGTCACGTTGCT+AGG | - | chr3_4:67741511-67741530 | Msa0516240:intron | 60.0% | |
| ! | GGGGTTGTTTCGGTAGCTGG+AGG | - | chr3_4:67742722-67742741 | Msa0516240:CDS | 60.0% |
| TAGCTGGAGGCTCCACCACT+TGG | - | chr3_4:67742735-67742754 | Msa0516240:intron | 60.0% | |
| TGGAGGCTCCACCACTTGGA+TGG | - | chr3_4:67742739-67742758 | Msa0516240:intron | 60.0% | |
| CTGGTGCACCCGTTACATCG+TGG | - | chr3_4:67744602-67744621 | Msa0516240:intron | 60.0% | |
| GCACCCGTTACATCGTGGGA+TGG | - | chr3_4:67744607-67744626 | Msa0516240:intron | 60.0% | |
| GAGGCATGTGGCGCTCATCT+GGG | + | chr3_4:67744846-67744865 | None:intergenic | 60.0% | |
| CAGATGAGCGCCACATGCCT+CGG | - | chr3_4:67744845-67744864 | Msa0516240:intron | 60.0% | |
| CGCTATATCGCCGAGGCATG+TGG | + | chr3_4:67744858-67744877 | None:intergenic | 60.0% | |
| !! | GTCCTGGTGCCGTTACCTGC+TGG | - | chr3_4:67739521-67739540 | Msa0516240:CDS | 65.0% |
| !! | CCTGGTGCCGTTACCTGCTG+GGG | - | chr3_4:67739523-67739542 | Msa0516240:CDS | 65.0% |
| GAACACCGTACTAGGCCCCC+AGG | - | chr3_4:67741758-67741777 | Msa0516240:intron | 65.0% | |
| GCCGGTGTGAATGAGGCCAC+AGG | - | chr3_4:67743118-67743137 | Msa0516240:intron | 65.0% | |
| CGAGGCATGTGGCGCTCATC+TGG | + | chr3_4:67744847-67744866 | None:intergenic | 65.0% | |
| ! | CCCCAGCAGGTAACGGCACC+AGG | + | chr3_4:67739526-67739545 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 67737820 | 67745307 | 67737820 | ID=Msa0516240;Name=Msa0516240 |
| chr3_4 | mRNA | 67737820 | 67745307 | 67737820 | ID=Msa0516240-mRNA-1;Parent=Msa0516240;Name=Msa0516240-mRNA-1;_AED=0.11;_eAED=0.11;_QI=315|1|1|1|0.66|0.57|7|377|770 |
| chr3_4 | exon | 67737820 | 67738748 | 67737820 | ID=Msa0516240-mRNA-1:exon:17719;Parent=Msa0516240-mRNA-1 |
| chr3_4 | exon | 67739485 | 67740594 | 67739485 | ID=Msa0516240-mRNA-1:exon:17718;Parent=Msa0516240-mRNA-1 |
| chr3_4 | exon | 67742012 | 67742041 | 67742012 | ID=Msa0516240-mRNA-1:exon:17717;Parent=Msa0516240-mRNA-1 |
| chr3_4 | exon | 67742558 | 67742752 | 67742558 | ID=Msa0516240-mRNA-1:exon:17716;Parent=Msa0516240-mRNA-1 |
| chr3_4 | exon | 67743583 | 67744054 | 67743583 | ID=Msa0516240-mRNA-1:exon:17715;Parent=Msa0516240-mRNA-1 |
| chr3_4 | exon | 67744952 | 67744991 | 67744952 | ID=Msa0516240-mRNA-1:exon:17714;Parent=Msa0516240-mRNA-1 |
| chr3_4 | exon | 67745079 | 67745307 | 67745079 | ID=Msa0516240-mRNA-1:exon:17713;Parent=Msa0516240-mRNA-1 |
| chr3_4 | five_prime_UTR | 67745079 | 67745307 | 67745079 | ID=Msa0516240-mRNA-1:five_prime_utr;Parent=Msa0516240-mRNA-1 |
| chr3_4 | five_prime_UTR | 67744952 | 67744991 | 67744952 | ID=Msa0516240-mRNA-1:five_prime_utr;Parent=Msa0516240-mRNA-1 |
| chr3_4 | five_prime_UTR | 67744009 | 67744054 | 67744009 | ID=Msa0516240-mRNA-1:five_prime_utr;Parent=Msa0516240-mRNA-1 |
| chr3_4 | CDS | 67743583 | 67744008 | 67743583 | ID=Msa0516240-mRNA-1:cds;Parent=Msa0516240-mRNA-1 |
| chr3_4 | CDS | 67742558 | 67742752 | 67742558 | ID=Msa0516240-mRNA-1:cds;Parent=Msa0516240-mRNA-1 |
| chr3_4 | CDS | 67742012 | 67742041 | 67742012 | ID=Msa0516240-mRNA-1:cds;Parent=Msa0516240-mRNA-1 |
| chr3_4 | CDS | 67739485 | 67740594 | 67739485 | ID=Msa0516240-mRNA-1:cds;Parent=Msa0516240-mRNA-1 |
| chr3_4 | CDS | 67738197 | 67738748 | 67738197 | ID=Msa0516240-mRNA-1:cds;Parent=Msa0516240-mRNA-1 |
| chr3_4 | three_prime_UTR | 67737820 | 67738196 | 67737820 | ID=Msa0516240-mRNA-1:three_prime_utr;Parent=Msa0516240-mRNA-1 |
| Gene Sequence |
| Protein sequence |
