Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0369620 | XP_003601009.1 | 95.541 | 157 | 5 | 1 | 1 | 157 | 1 | 155 | 1.88e-103 | 303 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0369620 | G7J2F5 | 95.541 | 157 | 5 | 1 | 1 | 157 | 1 | 155 | 8.97e-104 | 303 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0178960 | Msa0369620 | 0.805590 | 1.240123e-49 | -8.615850e-47 |
| Msa0226890 | Msa0369620 | 0.814477 | 1.510323e-51 | -8.615850e-47 |
| Msa0369620 | Msa0412970 | 0.823374 | 1.433722e-53 | -8.615850e-47 |
| Msa0369620 | Msa0417040 | 0.957347 | 3.377289e-115 | -8.615850e-47 |
| Msa0369620 | Msa0421780 | -0.808350 | 3.233991e-50 | -8.615850e-47 |
| Msa0369620 | Msa0467900 | -0.819378 | 1.198298e-52 | -8.615850e-47 |
| Msa0369620 | Msa0500360 | 0.801946 | 7.083345e-49 | -8.615850e-47 |
| Msa0369620 | Msa0509390 | 0.823836 | 1.117905e-53 | -8.615850e-47 |
| Msa0369620 | Msa0519220 | 0.806972 | 6.345005e-50 | -8.615850e-47 |
| Msa0369620 | Msa0562440 | 0.811882 | 5.605258e-51 | -8.615850e-47 |
| Msa0369620 | Msa0647450 | -0.825809 | 3.828045e-54 | -8.615850e-47 |
| Msa0369620 | Msa1043920 | 0.806583 | 7.664726e-50 | -8.615850e-47 |
| Msa0369620 | Msa1162550 | -0.800719 | 1.263226e-48 | -8.615850e-47 |
| Msa0369620 | Msa1233500 | 0.810017 | 1.420277e-50 | -8.615850e-47 |
| Msa0369620 | Msa1233890 | 0.808031 | 3.782072e-50 | -8.615850e-47 |
| Msa0369620 | Msa1271210 | 0.802684 | 4.991701e-49 | -8.615850e-47 |
| Msa0369620 | Msa1335860 | 0.820492 | 6.666207e-53 | -8.615850e-47 |
| Msa0369620 | Msa1348950 | 0.808363 | 3.212766e-50 | -8.615850e-47 |
| Msa0369620 | Msa1358960 | 0.820482 | 6.700091e-53 | -8.615850e-47 |
| Msa0288100 | Msa0369620 | 0.808143 | 3.578827e-50 | -8.615850e-47 |
| Msa0302580 | Msa0369620 | -0.802869 | 4.571299e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0369620 | MtrunA17_Chr3g0114281 | 95.541 | 157 | 5 | 1 | 1 | 157 | 1 | 155 | 1.73e-107 | 303 |
| Msa0369620 | MtrunA17_Chr0c32g0494171 | 62.921 | 89 | 33 | 0 | 68 | 156 | 12 | 100 | 8.73e-39 | 127 |
| Msa0369620 | MtrunA17_Chr7g0243961 | 62.921 | 89 | 33 | 0 | 68 | 156 | 12 | 100 | 8.73e-39 | 127 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0369620 | AT5G05360.1 | 47.020 | 151 | 64 | 5 | 16 | 154 | 17 | 163 | 1.01e-41 | 137 |
| Msa0369620 | AT5G05360.2 | 45.098 | 153 | 69 | 5 | 1 | 141 | 1 | 150 | 8.79e-36 | 122 |
| Msa0369620 | AT2G38450.1 | 60.494 | 81 | 32 | 0 | 69 | 149 | 55 | 135 | 6.35e-32 | 111 |
| Msa0369620 | AT2G38450.2 | 59.184 | 49 | 20 | 0 | 69 | 117 | 55 | 103 | 8.86e-16 | 69.7 |
Find 53 sgRNAs with CRISPR-Local
Find 280 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATACGGGTTGGGTTTGTTT+TGG | 0.339121 | 3_1:+66945397 | None:intergenic |
| AGTGCGGACTTGTTGTTTCT+TGG | 0.343442 | 3_1:+66945339 | None:intergenic |
| TCCACAGGCTCCACCTTCTT+CGG | 0.351408 | 3_1:+66945295 | None:intergenic |
| CAAATGTATTGCTCTGGATA+TGG | 0.370151 | 3_1:-66945163 | Msa0369620:CDS |
| TTGCAGTTGCAGCGATGAAC+TGG | 0.405296 | 3_1:+66945368 | None:intergenic |
| AAACTCGAATTGCTCTTTCC+AGG | 0.409919 | 3_1:-66945273 | Msa0369620:CDS |
| CAAGAAGTCGAAATTCAGTT+TGG | 0.410256 | 3_1:-66943900 | Msa0369620:CDS |
| GTACATCAATGCACGTTTCT+CGG | 0.413538 | 3_1:-66941660 | Msa0369620:three_prime_UTR |
| CTAGAAATTGTTACAATTCG+AGG | 0.415091 | 3_1:+66945588 | None:intergenic |
| GTGGTTTCACGATACGCTTA+AGG | 0.417498 | 3_1:-66945227 | Msa0369620:CDS |
| CTGGTTCAATGATACGGGTT+GGG | 0.430102 | 3_1:+66945387 | None:intergenic |
| CTTTCAAGTCAAGTTCTTGT+TGG | 0.438409 | 3_1:-66945187 | Msa0369620:CDS |
| ACAAGTCCGCACTGTTGTTA+AGG | 0.443164 | 3_1:-66945329 | Msa0369620:CDS |
| TGATTCGGATTCAAGTGAAA+TGG | 0.478803 | 3_1:-66943759 | Msa0369620:CDS |
| GTTGGTCAAATGTATTGCTC+TGG | 0.481330 | 3_1:-66945169 | Msa0369620:CDS |
| GTATCCTTAACTCTCTTCAT+CGG | 0.497537 | 3_1:-66941595 | Msa0369620:three_prime_UTR |
| GGTGGAATCGCCACCGAAGA+AGG | 0.500729 | 3_1:-66945308 | Msa0369620:CDS |
| TACTTAGTTTGTAAGTATGA+AGG | 0.501423 | 3_1:-66943723 | Msa0369620:intron |
| AGGTTATAGAGCAAGTGATT+CGG | 0.501656 | 3_1:-66943774 | Msa0369620:CDS |
| GCGGACTTGTTGTTTCTTGG+TGG | 0.506317 | 3_1:+66945342 | None:intergenic |
| AACTCGAATTGCTCTTTCCA+GGG | 0.508867 | 3_1:-66945272 | Msa0369620:CDS |
| TATCCTTAACTCTCTTCATC+GGG | 0.513073 | 3_1:-66941594 | Msa0369620:three_prime_UTR |
| GATGAACTGGTTCAATGATA+CGG | 0.513998 | 3_1:+66945381 | None:intergenic |
| CCGCCCGATGAAGAGAGTTA+AGG | 0.516752 | 3_1:+66941591 | None:intergenic |
| TTCTTGTCGCACAGAGTCAA+AGG | 0.533961 | 3_1:+66945459 | None:intergenic |
| TGTAAGTAGCAGTGTTGCAA+TGG | 0.540163 | 3_1:-66941407 | Msa0369620:three_prime_UTR |
| AAACCACCGATGAGTGCAAT+CGG | 0.543960 | 3_1:+66945243 | None:intergenic |
| ATGAACTGGTTCAATGATAC+GGG | 0.546395 | 3_1:+66945382 | None:intergenic |
| AGTGCAATCGGCGACCACCC+TGG | 0.552841 | 3_1:+66945255 | None:intergenic |
| TCAGTGCCTTGTTGATGAAG+AGG | 0.557735 | 3_1:-66941550 | Msa0369620:three_prime_UTR |
| TGTTTCTAGAAATCCTCAAA+AGG | 0.559783 | 3_1:-66945140 | Msa0369620:intron |
| ACTGGTTCAATGATACGGGT+TGG | 0.564172 | 3_1:+66945386 | None:intergenic |
| ACCGAAGAAGGTGGAGCCTG+TGG | 0.570187 | 3_1:-66945296 | Msa0369620:CDS |
| ACGCTTAAGGAGGCTAAACG+TGG | 0.571473 | 3_1:-66945214 | Msa0369620:CDS |
| TGGTCGCCGATTGCACTCAT+CGG | 0.571547 | 3_1:-66945249 | Msa0369620:CDS |
| ACAGGCTCCACCTTCTTCGG+TGG | 0.573283 | 3_1:+66945298 | None:intergenic |
| AGAGCAATTCGAGTTTCCAC+AGG | 0.580147 | 3_1:+66945280 | None:intergenic |
| CGCTTAAGGAGGCTAAACGT+GGG | 0.586241 | 3_1:-66945213 | Msa0369620:CDS |
| ATAGATATTATCAAACATGT+AGG | 0.590986 | 3_1:+66945559 | None:intergenic |
| ACTTGCAGCAAACTCATACA+AGG | 0.611154 | 3_1:+66941514 | None:intergenic |
| TTCGGATTCAAGTGAAATGG+AGG | 0.617025 | 3_1:-66943756 | Msa0369620:CDS |
| TCGCCGATTGCACTCATCGG+TGG | 0.618704 | 3_1:-66945246 | Msa0369620:CDS |
| GGAATCGCCACCGAAGAAGG+TGG | 0.624182 | 3_1:-66945305 | Msa0369620:CDS |
| TGTGTTTATAGGGACATGCA+TGG | 0.630942 | 3_1:-66943936 | Msa0369620:intron |
| AGTCCGCACTGTTGTTAAGG+TGG | 0.635070 | 3_1:-66945326 | Msa0369620:CDS |
| CCTTAACTCTCTTCATCGGG+CGG | 0.646767 | 3_1:-66941591 | Msa0369620:three_prime_UTR |
| GTTTCACGATACGCTTAAGG+AGG | 0.650532 | 3_1:-66945224 | Msa0369620:CDS |
| TCGAATTGCTCTTTCCAGGG+TGG | 0.674129 | 3_1:-66945269 | Msa0369620:CDS |
| GAAGTTACACTACAGACAGA+CGG | 0.688019 | 3_1:-66945661 | Msa0369620:five_prime_UTR |
| ACACTTCCTCTTCATCAACA+AGG | 0.689850 | 3_1:+66941544 | None:intergenic |
| GCTTAAGGAGGCTAAACGTG+GGG | 0.707744 | 3_1:-66945212 | Msa0369620:CDS |
| AACGAATAAACAGAGAGCAG+CGG | 0.712077 | 3_1:+66941700 | None:intergenic |
| ATTCCACCTTAACAACAGTG+CGG | 0.785264 | 3_1:+66945323 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTATATGCTCTAAATAA+TGG | - | chr3_1:66943652-66943671 | Msa0369620:intron | 15.0% |
| !!! | ATAGAAAAAATGGTATTTTT+AGG | + | chr3_1:66944896-66944915 | None:intergenic | 15.0% |
| !!! | AAAATACCATTTTTTCTATA+AGG | - | chr3_1:66944897-66944916 | Msa0369620:intron | 15.0% |
| !!! | AAATGGTTTATTTTTATTCT+GGG | + | chr3_1:66944931-66944950 | None:intergenic | 15.0% |
| !!! | TAAATGGTTTATTTTTATTC+TGG | + | chr3_1:66944932-66944951 | None:intergenic | 15.0% |
| !! | CATTATTAGAAATATAAATC+AGG | + | chr3_1:66945276-66945295 | None:intergenic | 15.0% |
| !! | ATAGATATTATCAAACATGT+AGG | + | chr3_1:66941458-66941477 | None:intergenic | 20.0% |
| !!! | TTAGCAACAATTTGATTTTA+TGG | - | chr3_1:66942144-66942163 | Msa0369620:intron | 20.0% |
| !! | TTGGATTAACAACTTAATTA+AGG | + | chr3_1:66942282-66942301 | None:intergenic | 20.0% |
| !! | CTCAACAATTATAACAAAAA+GGG | + | chr3_1:66942445-66942464 | None:intergenic | 20.0% |
| !! | ACTCAACAATTATAACAAAA+AGG | + | chr3_1:66942446-66942465 | None:intergenic | 20.0% |
| !! | TTGTTATCTACTTTCAAATA+TGG | - | chr3_1:66942823-66942842 | Msa0369620:intron | 20.0% |
| !! | ATTGACGGTAAAATATTATA+CGG | + | chr3_1:66942904-66942923 | None:intergenic | 20.0% |
| !! | AAACAAAATAAGAAACAATC+AGG | + | chr3_1:66943214-66943233 | None:intergenic | 20.0% |
| !!! | TTCTTATTTTGTTTACATAC+AGG | - | chr3_1:66943220-66943239 | Msa0369620:intron | 20.0% |
| !! | TAGTATAATTCTCAATTCTT+TGG | - | chr3_1:66943726-66943745 | Msa0369620:exon | 20.0% |
| !!! | AGTCTTATTAAACATTATCA+GGG | + | chr3_1:66944162-66944181 | None:intergenic | 20.0% |
| !!! | AAGTCTTATTAAACATTATC+AGG | + | chr3_1:66944163-66944182 | None:intergenic | 20.0% |
| !! | ATGATATTTAAGCGTATTAT+GGG | - | chr3_1:66944223-66944242 | Msa0369620:intron | 20.0% |
| !! | AATACCATCAAAATATGAAT+TGG | - | chr3_1:66944467-66944486 | Msa0369620:intron | 20.0% |
| !!! | TTAACCAATTCATATTTTGA+TGG | + | chr3_1:66944474-66944493 | None:intergenic | 20.0% |
| !! | CTAATTCCTTATAGAAAAAA+TGG | + | chr3_1:66944906-66944925 | None:intergenic | 20.0% |
| !!! | CATTTTTTCTATAAGGAATT+AGG | - | chr3_1:66944904-66944923 | Msa0369620:intron | 20.0% |
| !!! | AATGGTTTATTTTTATTCTG+GGG | + | chr3_1:66944930-66944949 | None:intergenic | 20.0% |
| !! | AACCATTTAGTATAACTAAA+TGG | - | chr3_1:66944943-66944962 | Msa0369620:intron | 20.0% |
| !! | TTATCATTAATGATTGAACT+CGG | + | chr3_1:66945023-66945042 | None:intergenic | 20.0% |
| !! | AAAAGAATGACGTATATTAT+TGG | - | chr3_1:66945044-66945063 | Msa0369620:intron | 20.0% |
| !!! | TCTTTAAGGTTTTAATATAG+AGG | - | chr3_1:66945250-66945269 | Msa0369620:CDS | 20.0% |
| !!! | TCTTGTCTTGTTTATTTTCA+TGG | - | chr3_1:66941526-66941545 | Msa0369620:three_prime_UTR | 25.0% |
| !! | AGAAAAAAAAAGACCTTTTG+AGG | + | chr3_1:66941890-66941909 | None:intergenic | 25.0% |
| ! | ACACTAATGTGAAATGATAT+AGG | - | chr3_1:66941953-66941972 | Msa0369620:intron | 25.0% |
| ! | CACTAATGTGAAATGATATA+GGG | - | chr3_1:66941954-66941973 | Msa0369620:intron | 25.0% |
| ! | TATAGGGTTTATTACTTGTT+AGG | - | chr3_1:66941970-66941989 | Msa0369620:intron | 25.0% |
| ! | TCATAACTCATAAGACATTT+GGG | - | chr3_1:66942019-66942038 | Msa0369620:intron | 25.0% |
| !! | AAGTCTTATCTCATTAAGTT+GGG | + | chr3_1:66942193-66942212 | None:intergenic | 25.0% |
| !!! | TACTTTTGTTATGTCATGTT+TGG | + | chr3_1:66942301-66942320 | None:intergenic | 25.0% |
| ! | CAATATTGGAATCAAATTGT+CGG | + | chr3_1:66942333-66942352 | None:intergenic | 25.0% |
| ! | AGTGAAGAATAACACAATAT+TGG | + | chr3_1:66942347-66942366 | None:intergenic | 25.0% |
| ! | ACAAGGCATATATAATACTA+CGG | + | chr3_1:66942615-66942634 | None:intergenic | 25.0% |
| ! | ATTAGTACTTGAGTGAATTA+GGG | + | chr3_1:66942649-66942668 | None:intergenic | 25.0% |
| ! | TATTAGTACTTGAGTGAATT+AGG | + | chr3_1:66942650-66942669 | None:intergenic | 25.0% |
| ! | TTCACTCAAGTACTAATATA+TGG | - | chr3_1:66942652-66942671 | Msa0369620:intron | 25.0% |
| ! | AGTACTAATATATGGAACTA+TGG | - | chr3_1:66942660-66942679 | Msa0369620:intron | 25.0% |
| !! | GTTCTAACAATTTGTTTATC+AGG | - | chr3_1:66942797-66942816 | Msa0369620:intron | 25.0% |
| !!! | TTTTGTTGTAATCCAAATTC+TGG | - | chr3_1:66942877-66942896 | Msa0369620:intron | 25.0% |
| ! | TGTTACAAACTGTGTTTATA+GGG | - | chr3_1:66943068-66943087 | Msa0369620:intron | 25.0% |
| !!! | TACTTAGTTTGTAAGTATGA+AGG | - | chr3_1:66943291-66943310 | Msa0369620:intron | 25.0% |
| !! | TTGCTTGTTCTTATTTACTT+CGG | - | chr3_1:66943412-66943431 | Msa0369620:intron | 25.0% |
| ! | CATAGTTTAATCTTGTTAAC+CGG | - | chr3_1:66943444-66943463 | Msa0369620:intron | 25.0% |
| ! | ATAGTTTAATCTTGTTAACC+GGG | - | chr3_1:66943445-66943464 | Msa0369620:intron | 25.0% |
| ! | GAACAGCTAAATTTAAAGAA+TGG | + | chr3_1:66943494-66943513 | None:intergenic | 25.0% |
| !! | TTTTCGATTATTATACGACA+AGG | + | chr3_1:66943536-66943555 | None:intergenic | 25.0% |
| !!! | AATCTGAAGCTTTAAGAAAA+AGG | + | chr3_1:66943622-66943641 | None:intergenic | 25.0% |
| !! | ATTATACTAGATGAAAGCAT+CGG | + | chr3_1:66943715-66943734 | None:intergenic | 25.0% |
| ! | AAACCAAATACAACCAAAAT+AGG | + | chr3_1:66943937-66943956 | None:intergenic | 25.0% |
| !! | GTATGATCATAAGCTTTAAT+CGG | - | chr3_1:66944025-66944044 | Msa0369620:intron | 25.0% |
| ! | GATGATATTTAAGCGTATTA+TGG | - | chr3_1:66944222-66944241 | Msa0369620:intron | 25.0% |
| ! | TAGATAACGACATATTAACA+AGG | + | chr3_1:66944313-66944332 | None:intergenic | 25.0% |
| ! | TGTTAATATGTCGTTATCTA+AGG | - | chr3_1:66944313-66944332 | Msa0369620:intron | 25.0% |
| !!! | TCATATTTTGATGGTATTTC+TGG | + | chr3_1:66944465-66944484 | None:intergenic | 25.0% |
| ! | CAAATGCTTAAATACGTTTA+AGG | - | chr3_1:66944686-66944705 | Msa0369620:intron | 25.0% |
| !! | TTAAAACCTTAAAGAGTACA+TGG | + | chr3_1:66945245-66945264 | None:intergenic | 25.0% |
| CTAGAAATTGTTACAATTCG+AGG | + | chr3_1:66941429-66941448 | None:intergenic | 30.0% | |
| !! | TGTTTCTAGAAATCCTCAAA+AGG | - | chr3_1:66941874-66941893 | Msa0369620:intron | 30.0% |
| GTCATAACTCATAAGACATT+TGG | - | chr3_1:66942018-66942037 | Msa0369620:intron | 30.0% | |
| ! | ATAAGACATTTGGGATTGTT+TGG | - | chr3_1:66942028-66942047 | Msa0369620:intron | 30.0% |
| ! | TAAGACATTTGGGATTGTTT+GGG | - | chr3_1:66942029-66942048 | Msa0369620:intron | 30.0% |
| ! | CAAGTCTTATCTCATTAAGT+TGG | + | chr3_1:66942194-66942213 | None:intergenic | 30.0% |
| ATATTATACGGACCAGAATT+TGG | + | chr3_1:66942892-66942911 | None:intergenic | 30.0% | |
| ! | TTTTACCGTCAATTGCATTT+TGG | - | chr3_1:66942911-66942930 | Msa0369620:intron | 30.0% |
| ! | TTTACCGTCAATTGCATTTT+GGG | - | chr3_1:66942912-66942931 | Msa0369620:intron | 30.0% |
| AACCAATAAGTTTATGAGCA+GGG | + | chr3_1:66943028-66943047 | None:intergenic | 30.0% | |
| GTGTTACAAACTGTGTTTAT+AGG | - | chr3_1:66943067-66943086 | Msa0369620:intron | 30.0% | |
| GTTTGTAAGTATGAAGGTAA+TGG | - | chr3_1:66943297-66943316 | Msa0369620:intron | 30.0% | |
| AATTAAGTAGAACAATTGCC+CGG | + | chr3_1:66943466-66943485 | None:intergenic | 30.0% | |
| ATACTAACCAGTAGTATGAT+TGG | - | chr3_1:66943831-66943850 | Msa0369620:intron | 30.0% | |
| TCACTATTGTAAGTCCTTAA+GGG | - | chr3_1:66944053-66944072 | Msa0369620:intron | 30.0% | |
| !! | ATTTGGAGTGTTTTATGTCT+AGG | - | chr3_1:66944103-66944122 | Msa0369620:intron | 30.0% |
| ACGCTTAAATATCATCTTGT+TGG | + | chr3_1:66944218-66944237 | None:intergenic | 30.0% | |
| TCGATTGAACAAAATGATGT+TGG | - | chr3_1:66944273-66944292 | Msa0369620:intron | 30.0% | |
| TTGCTTCAAACATACATGTT+TGG | - | chr3_1:66944526-66944545 | Msa0369620:intron | 30.0% | |
| ! | GCTTAAATACGTTTAAGGTT+AGG | - | chr3_1:66944691-66944710 | Msa0369620:intron | 30.0% |
| TTGCTTCTATTAGACTCTAA+GGG | - | chr3_1:66944735-66944754 | Msa0369620:intron | 30.0% | |
| ATAGCATGAAAAAAGGCAAT+AGG | + | chr3_1:66944810-66944829 | None:intergenic | 30.0% | |
| CTACGTAATAGCATGAAAAA+AGG | + | chr3_1:66944817-66944836 | None:intergenic | 30.0% | |
| CGCCATTTAGTTATACTAAA+TGG | + | chr3_1:66944948-66944967 | None:intergenic | 30.0% | |
| CTAAATGGCGTATATAAATG+TGG | - | chr3_1:66944958-66944977 | Msa0369620:intron | 30.0% | |
| ! | AAATGCTCTACTTTGAAGAT+TGG | - | chr3_1:66945082-66945101 | Msa0369620:intron | 30.0% |
| ! | GCTTTTATCTCTCATAAAAC+AGG | - | chr3_1:66945148-66945167 | Msa0369620:CDS | 30.0% |
| CACTTTGTAAGTAAATCCTT+TGG | - | chr3_1:66945172-66945191 | Msa0369620:CDS | 30.0% | |
| ! | ATGAACTGGTTCAATGATAC+GGG | + | chr3_1:66941635-66941654 | None:intergenic | 35.0% |
| ! | GATGAACTGGTTCAATGATA+CGG | + | chr3_1:66941636-66941655 | None:intergenic | 35.0% |
| ! | CTTTCAAGTCAAGTTCTTGT+TGG | - | chr3_1:66941827-66941846 | Msa0369620:intron | 35.0% |
| ! | CAAATGTATTGCTCTGGATA+TGG | - | chr3_1:66941851-66941870 | Msa0369620:intron | 35.0% |
| ! | CGTTTTCAGCTTATTTCAGT+AGG | - | chr3_1:66942092-66942111 | Msa0369620:intron | 35.0% |
| !! | CTTATCTCATTAAGTTGGGT+CGG | + | chr3_1:66942189-66942208 | None:intergenic | 35.0% |
| ! | TGTGTTATTCTTCACTGCTT+TGG | - | chr3_1:66942351-66942370 | Msa0369620:intron | 35.0% |
| ! | AAGAAAATTTTCCAACCTCC+CGG | + | chr3_1:66942403-66942422 | None:intergenic | 35.0% |
| TTCATACACAGACACAAAAG+AGG | - | chr3_1:66942470-66942489 | Msa0369620:intron | 35.0% | |
| TCATACACAGACACAAAAGA+GGG | - | chr3_1:66942471-66942490 | Msa0369620:intron | 35.0% | |
| TTAGGGTTTACAGTACTACA+AGG | + | chr3_1:66942632-66942651 | None:intergenic | 35.0% | |
| ATAACGCAAATCGCAAACAA+TGG | + | chr3_1:66942752-66942771 | None:intergenic | 35.0% | |
| AGAACCCAAAATGCAATTGA+CGG | + | chr3_1:66942919-66942938 | None:intergenic | 35.0% | |
| TTCCCTGCTCATAAACTTAT+TGG | - | chr3_1:66943023-66943042 | Msa0369620:intron | 35.0% | |
| GAACCAATAAGTTTATGAGC+AGG | + | chr3_1:66943029-66943048 | None:intergenic | 35.0% | |
| ACACAGTTTGTAACACAGTA+TGG | + | chr3_1:66943063-66943082 | None:intergenic | 35.0% | |
| CAAGAAGTCGAAATTCAGTT+TGG | - | chr3_1:66943114-66943133 | Msa0369620:intron | 35.0% | |
| AGGTTATAGAGCAAGTGATT+CGG | - | chr3_1:66943240-66943259 | Msa0369620:intron | 35.0% | |
| ! | TGATTCGGATTCAAGTGAAA+TGG | - | chr3_1:66943255-66943274 | Msa0369620:intron | 35.0% |
| GGGCAATTGTTCTACTTAAT+TGG | - | chr3_1:66943465-66943484 | Msa0369620:intron | 35.0% | |
| TTAGCTGTTCATTTCCACAA+AGG | - | chr3_1:66943504-66943523 | Msa0369620:intron | 35.0% | |
| AAACAAAACAACACTCGTCT+AGG | + | chr3_1:66943599-66943618 | None:intergenic | 35.0% | |
| ATAATGGTTACCCTCTATCT+AGG | - | chr3_1:66943668-66943687 | Msa0369620:intron | 35.0% | |
| CTAACATAGTCCTAGATAGA+GGG | + | chr3_1:66943681-66943700 | None:intergenic | 35.0% | |
| ACTAACATAGTCCTAGATAG+AGG | + | chr3_1:66943682-66943701 | None:intergenic | 35.0% | |
| ! | TCATACTACTGGTTAGTATC+AGG | + | chr3_1:66943830-66943849 | None:intergenic | 35.0% |
| CAGTAGTATGATTGGTATCT+GGG | - | chr3_1:66943839-66943858 | Msa0369620:intron | 35.0% | |
| !!! | GCACCTATTTTGGTTGTATT+TGG | - | chr3_1:66943931-66943950 | Msa0369620:intron | 35.0% |
| AAAAGCTGCCTGATAATAAC+TGG | - | chr3_1:66943974-66943993 | Msa0369620:intron | 35.0% | |
| AAAGCTGCCTGATAATAACT+GGG | - | chr3_1:66943975-66943994 | Msa0369620:intron | 35.0% | |
| TCATACTCCCAGTTATTATC+AGG | + | chr3_1:66943985-66944004 | None:intergenic | 35.0% | |
| CTCACTATTGTAAGTCCTTA+AGG | - | chr3_1:66944052-66944071 | Msa0369620:intron | 35.0% | |
| !! | ACTGAGCGTTGGAATTTATT+TGG | - | chr3_1:66944086-66944105 | Msa0369620:intron | 35.0% |
| GTACGATCACAAAGTGTATT+TGG | - | chr3_1:66944133-66944152 | Msa0369620:intron | 35.0% | |
| TTAGTAGCAAGCTGAAATAG+AGG | - | chr3_1:66944357-66944376 | Msa0369620:intron | 35.0% | |
| TAGTAGCAAGCTGAAATAGA+GGG | - | chr3_1:66944358-66944377 | Msa0369620:intron | 35.0% | |
| GAATTGGTTAATACCTGTGA+TGG | - | chr3_1:66944483-66944502 | Msa0369620:intron | 35.0% | |
| ATACATGTTTGGAAATCCGT+TGG | - | chr3_1:66944537-66944556 | Msa0369620:intron | 35.0% | |
| CATGTCTATCATACTGCAAT+TGG | + | chr3_1:66944566-66944585 | None:intergenic | 35.0% | |
| AATGCTACGCTACATACATT+AGG | - | chr3_1:66944594-66944613 | Msa0369620:intron | 35.0% | |
| GTTAACAGTTCTCTATGGTT+TGG | + | chr3_1:66944652-66944671 | None:intergenic | 35.0% | |
| GCATAGTTAACAGTTCTCTA+TGG | + | chr3_1:66944657-66944676 | None:intergenic | 35.0% | |
| CTTGCTTCTATTAGACTCTA+AGG | - | chr3_1:66944734-66944753 | Msa0369620:intron | 35.0% | |
| TTCATGCTATTACGTAGCTT+TGG | - | chr3_1:66944820-66944839 | Msa0369620:intron | 35.0% | |
| TCATGCTATTACGTAGCTTT+GGG | - | chr3_1:66944821-66944840 | Msa0369620:intron | 35.0% | |
| !!! | TATTTTTAGGCCTAAAAGCG+AGG | + | chr3_1:66944883-66944902 | None:intergenic | 35.0% |
| ATGGCGTATATAAATGTGGA+TGG | - | chr3_1:66944962-66944981 | Msa0369620:intron | 35.0% | |
| ! | TGTGTGAGTGTTGTAAACTT+CGG | - | chr3_1:66944994-66945013 | Msa0369620:intron | 35.0% |
| ! | TACTTTGAAGATTGGAGATC+TGG | - | chr3_1:66945090-66945109 | Msa0369620:intron | 35.0% |
| ! | ACTTTGAAGATTGGAGATCT+GGG | - | chr3_1:66945091-66945110 | Msa0369620:intron | 35.0% |
| CAACAACCATGTACTCTTTA+AGG | - | chr3_1:66945236-66945255 | Msa0369620:CDS | 35.0% | |
| GTATCCTTAACTCTCTTCAT+CGG | - | chr3_1:66945419-66945438 | Msa0369620:CDS | 35.0% | |
| TATCCTTAACTCTCTTCATC+GGG | - | chr3_1:66945420-66945439 | Msa0369620:CDS | 35.0% | |
| ATTGAAAAAAGACAGCTGTC+TGG | + | chr3_1:66945549-66945568 | None:intergenic | 35.0% | |
| GAAGTTACACTACAGACAGA+CGG | - | chr3_1:66941353-66941372 | Msa0369620:three_prime_UTR | 40.0% | |
| !!! | GTTGGGTTTGTTTTGGTCTA+TGG | + | chr3_1:66941613-66941632 | None:intergenic | 40.0% |
| ATTCCACCTTAACAACAGTG+CGG | + | chr3_1:66941694-66941713 | None:intergenic | 40.0% | |
| AAACTCGAATTGCTCTTTCC+AGG | - | chr3_1:66941741-66941760 | Msa0369620:intron | 40.0% | |
| AACTCGAATTGCTCTTTCCA+GGG | - | chr3_1:66941742-66941761 | Msa0369620:intron | 40.0% | |
| GTTGGTCAAATGTATTGCTC+TGG | - | chr3_1:66941845-66941864 | Msa0369620:intron | 40.0% | |
| CTTATTTCAGTAGGCTCACT+AGG | - | chr3_1:66942101-66942120 | Msa0369620:intron | 40.0% | |
| CATACACAGACACAAAAGAG+GGG | - | chr3_1:66942472-66942491 | Msa0369620:intron | 40.0% | |
| TTGTCCGATCTGCTTAAACA+AGG | - | chr3_1:66942717-66942736 | Msa0369620:intron | 40.0% | |
| TGTCCGATCTGCTTAAACAA+GGG | - | chr3_1:66942718-66942737 | Msa0369620:intron | 40.0% | |
| ! | GATCCCTTGTTTAAGCAGAT+CGG | + | chr3_1:66942724-66942743 | None:intergenic | 40.0% |
| TGTGTTTATAGGGACATGCA+TGG | - | chr3_1:66943078-66943097 | Msa0369620:intron | 40.0% | |
| TTCGGATTCAAGTGAAATGG+AGG | - | chr3_1:66943258-66943277 | Msa0369620:intron | 40.0% | |
| CCAGATACCAATCATACTAC+TGG | + | chr3_1:66943841-66943860 | None:intergenic | 40.0% | |
| CCAGTAGTATGATTGGTATC+TGG | - | chr3_1:66943838-66943857 | Msa0369620:intron | 40.0% | |
| ATCTGGGTGTATTCAGTATG+AGG | - | chr3_1:66943855-66943874 | Msa0369620:intron | 40.0% | |
| CTATTGTAAGTCCTTAAGGG+AGG | - | chr3_1:66944056-66944075 | Msa0369620:intron | 40.0% | |
| !! | AAATAGAGGGTGTCCAAACA+GGG | - | chr3_1:66944371-66944390 | Msa0369620:intron | 40.0% |
| TTGGTTAATACCTGTGATGG+TGG | - | chr3_1:66944486-66944505 | Msa0369620:intron | 40.0% | |
| ! | CTATTAGACTCTAAGGGATC+AGG | - | chr3_1:66944741-66944760 | Msa0369620:intron | 40.0% |
| ! | GATTCTAACCGACTTATGCT+TGG | + | chr3_1:66944861-66944880 | None:intergenic | 40.0% |
| TATAAATGTGGATGGTGCTC+AGG | - | chr3_1:66944970-66944989 | Msa0369620:intron | 40.0% | |
| ! | GTGTGAGTGTTGTAAACTTC+GGG | - | chr3_1:66944995-66945014 | Msa0369620:intron | 40.0% |
| AGAATCATACGTCAAGCCAA+AGG | + | chr3_1:66945191-66945210 | None:intergenic | 40.0% | |
| AACGAATAAACAGAGAGCAG+CGG | + | chr3_1:66945317-66945336 | None:intergenic | 40.0% | |
| GTACATCAATGCACGTTTCT+CGG | - | chr3_1:66945354-66945373 | Msa0369620:CDS | 40.0% | |
| ACACTTCCTCTTCATCAACA+AGG | + | chr3_1:66945473-66945492 | None:intergenic | 40.0% | |
| ACTTGCAGCAAACTCATACA+AGG | + | chr3_1:66945503-66945522 | None:intergenic | 40.0% | |
| TGTAAGTAGCAGTGTTGCAA+TGG | - | chr3_1:66945607-66945626 | Msa0369620:five_prime_UTR | 40.0% | |
| TTCTTGTCGCACAGAGTCAA+AGG | + | chr3_1:66941558-66941577 | None:intergenic | 45.0% | |
| !!! | GATACGGGTTGGGTTTGTTT+TGG | + | chr3_1:66941620-66941639 | None:intergenic | 45.0% |
| CTGGTTCAATGATACGGGTT+GGG | + | chr3_1:66941630-66941649 | None:intergenic | 45.0% | |
| ! | ACTGGTTCAATGATACGGGT+TGG | + | chr3_1:66941631-66941650 | None:intergenic | 45.0% |
| !! | AGTGCGGACTTGTTGTTTCT+TGG | + | chr3_1:66941678-66941697 | None:intergenic | 45.0% |
| ACAAGTCCGCACTGTTGTTA+AGG | - | chr3_1:66941685-66941704 | Msa0369620:three_prime_UTR | 45.0% | |
| ! | AGAGCAATTCGAGTTTCCAC+AGG | + | chr3_1:66941737-66941756 | None:intergenic | 45.0% |
| AAACCACCGATGAGTGCAAT+CGG | + | chr3_1:66941774-66941793 | None:intergenic | 45.0% | |
| GTGGTTTCACGATACGCTTA+AGG | - | chr3_1:66941787-66941806 | Msa0369620:intron | 45.0% | |
| GTTTCACGATACGCTTAAGG+AGG | - | chr3_1:66941790-66941809 | Msa0369620:intron | 45.0% | |
| GGGATTGTTTGGGAGAACTT+AGG | - | chr3_1:66942039-66942058 | Msa0369620:intron | 45.0% | |
| AGGCTCACTAGGATAGCTAA+TGG | - | chr3_1:66942112-66942131 | Msa0369620:intron | 45.0% | |
| !! | CTGCTTTGGAAATGAAGCTG+AGG | - | chr3_1:66942365-66942384 | Msa0369620:intron | 45.0% |
| !! | GGTTCTGAATCTCGTTCAGT+TGG | - | chr3_1:66942933-66942952 | Msa0369620:intron | 45.0% |
| CAACTAAGCGAAAAACCTCC+AGG | - | chr3_1:66943137-66943156 | Msa0369620:intron | 45.0% | |
| ATAAGACAGAGCAGCTTACC+TGG | + | chr3_1:66943158-66943177 | None:intergenic | 45.0% | |
| GTGCAGTTATTGAGCCAGTT+TGG | - | chr3_1:66943178-66943197 | Msa0369620:intron | 45.0% | |
| CAGGACAAGCAAAACCAAAC+TGG | + | chr3_1:66943195-66943214 | None:intergenic | 45.0% | |
| CGACAAGGCATATACCTTTG+TGG | + | chr3_1:66943521-66943540 | None:intergenic | 45.0% | |
| ACTATCAAGTGTCAGTCAGC+TGG | - | chr3_1:66943903-66943922 | Msa0369620:CDS | 45.0% | |
| CTATCAAGTGTCAGTCAGCT+GGG | - | chr3_1:66943904-66943923 | Msa0369620:CDS | 45.0% | |
| AAGCGTATTATGGGACGTGA+AGG | - | chr3_1:66944232-66944251 | Msa0369620:intron | 45.0% | |
| !! | GAAATAGAGGGTGTCCAAAC+AGG | - | chr3_1:66944370-66944389 | Msa0369620:intron | 45.0% |
| TTTGCTGCTAACTCCCTGTT+TGG | + | chr3_1:66944387-66944406 | None:intergenic | 45.0% | |
| TTAGCAGCAAACTGGGATCA+AGG | - | chr3_1:66944396-66944415 | Msa0369620:intron | 45.0% | |
| AAACTGGGATCAAGGTGCAT+GGG | - | chr3_1:66944404-66944423 | Msa0369620:intron | 45.0% | |
| TGCATGGGTGAGAATGTAAC+AGG | - | chr3_1:66944419-66944438 | Msa0369620:intron | 45.0% | |
| GCATGGGTGAGAATGTAACA+GGG | - | chr3_1:66944420-66944439 | Msa0369620:intron | 45.0% | |
| GAGAATGTAACAGGGAATGC+TGG | - | chr3_1:66944428-66944447 | Msa0369620:intron | 45.0% | |
| TTCATCTTGTCCACCATCAC+AGG | + | chr3_1:66944499-66944518 | None:intergenic | 45.0% | |
| !! | ATGGTGGACAAGATGAACAG+AGG | - | chr3_1:66944502-66944521 | Msa0369620:intron | 45.0% |
| ATACTGCAATTGGCAGCCAA+CGG | + | chr3_1:66944556-66944575 | None:intergenic | 45.0% | |
| ACGCTACATACATTAGGCAG+TGG | - | chr3_1:66944600-66944619 | Msa0369620:intron | 45.0% | |
| !! | ATTACGTAGCTTTGGGCAAC+AGG | - | chr3_1:66944828-66944847 | Msa0369620:intron | 45.0% |
| !! | TTACGTAGCTTTGGGCAACA+GGG | - | chr3_1:66944829-66944848 | Msa0369620:intron | 45.0% |
| ! | AACCGACTTATGCTTGGATC+AGG | + | chr3_1:66944855-66944874 | None:intergenic | 45.0% |
| !! | CGGTTAGAATCCTCGCTTTT+AGG | - | chr3_1:66944870-66944889 | Msa0369620:intron | 45.0% |
| ! | TCAGTGCCTTGTTGATGAAG+AGG | - | chr3_1:66945464-66945483 | Msa0369620:CDS | 45.0% |
| TTGCAGTTGCAGCGATGAAC+TGG | + | chr3_1:66941649-66941668 | None:intergenic | 50.0% | |
| !! | GCGGACTTGTTGTTTCTTGG+TGG | + | chr3_1:66941675-66941694 | None:intergenic | 50.0% |
| AGTCCGCACTGTTGTTAAGG+TGG | - | chr3_1:66941688-66941707 | Msa0369620:three_prime_UTR | 50.0% | |
| TCGAATTGCTCTTTCCAGGG+TGG | - | chr3_1:66941745-66941764 | Msa0369620:intron | 50.0% | |
| ACGCTTAAGGAGGCTAAACG+TGG | - | chr3_1:66941800-66941819 | Msa0369620:intron | 50.0% | |
| CGCTTAAGGAGGCTAAACGT+GGG | - | chr3_1:66941801-66941820 | Msa0369620:intron | 50.0% | |
| GCTTAAGGAGGCTAAACGTG+GGG | - | chr3_1:66941802-66941821 | Msa0369620:intron | 50.0% | |
| GCTGAGGTTAGATACAGTGC+CGG | - | chr3_1:66942381-66942400 | Msa0369620:intron | 50.0% | |
| CTGAGGTTAGATACAGTGCC+GGG | - | chr3_1:66942382-66942401 | Msa0369620:intron | 50.0% | |
| ACAGACACAAAAGAGGGGCA+AGG | - | chr3_1:66942477-66942496 | Msa0369620:intron | 50.0% | |
| CAGACACAAAAGAGGGGCAA+GGG | - | chr3_1:66942478-66942497 | Msa0369620:intron | 50.0% | |
| AGACACAAAAGAGGGGCAAG+GGG | - | chr3_1:66942479-66942498 | Msa0369620:intron | 50.0% | |
| CCAGATTACAACAATGCCCC+TGG | + | chr3_1:66942591-66942610 | None:intergenic | 50.0% | |
| !! | CCAGGGGCATTGTTGTAATC+TGG | - | chr3_1:66942588-66942607 | Msa0369620:intron | 50.0% |
| GTAAGTCCTTAAGGGAGGTC+AGG | - | chr3_1:66944061-66944080 | Msa0369620:intron | 50.0% | |
| GACGTGAAGGATGTTGATCG+AGG | - | chr3_1:66944245-66944264 | Msa0369620:intron | 50.0% | |
| ACAGGGAGTTAGCAGCAAAC+TGG | - | chr3_1:66944388-66944407 | Msa0369620:intron | 50.0% | |
| CAGGGAGTTAGCAGCAAACT+GGG | - | chr3_1:66944389-66944408 | Msa0369620:intron | 50.0% | |
| CAAACTGGGATCAAGGTGCA+TGG | - | chr3_1:66944403-66944422 | Msa0369620:intron | 50.0% | |
| ! | GTAACAGGGAATGCTGGCTA+AGG | - | chr3_1:66944434-66944453 | Msa0369620:intron | 50.0% |
| TTGGCCATGCATGCATGTCA+TGG | + | chr3_1:66944633-66944652 | None:intergenic | 50.0% | |
| GGCCTGATCCAAGCATAAGT+CGG | - | chr3_1:66944850-66944869 | Msa0369620:intron | 50.0% | |
| CCTTAACTCTCTTCATCGGG+CGG | - | chr3_1:66945423-66945442 | Msa0369620:CDS | 50.0% | |
| TCCACAGGCTCCACCTTCTT+CGG | + | chr3_1:66941722-66941741 | None:intergenic | 55.0% | |
| ! | TGGTCGCCGATTGCACTCAT+CGG | - | chr3_1:66941765-66941784 | Msa0369620:intron | 55.0% |
| ! | AGGTTAGATACAGTGCCGGG+AGG | - | chr3_1:66942385-66942404 | Msa0369620:intron | 55.0% |
| ! | TAGATACAGTGCCGGGAGGT+TGG | - | chr3_1:66942389-66942408 | Msa0369620:intron | 55.0% |
| AGACAGAGCAGCTTACCTGG+AGG | + | chr3_1:66943155-66943174 | None:intergenic | 55.0% | |
| CAGTTGCCTGACCTCCCTTA+AGG | + | chr3_1:66944070-66944089 | None:intergenic | 55.0% | |
| CCATGCATGCATGTCATGGC+AGG | + | chr3_1:66944629-66944648 | None:intergenic | 55.0% | |
| CCTGCCATGACATGCATGCA+TGG | - | chr3_1:66944626-66944645 | Msa0369620:intron | 55.0% | |
| CCGCCCGATGAAGAGAGTTA+AGG | + | chr3_1:66945426-66945445 | None:intergenic | 55.0% | |
| GGTGGAATCGCCACCGAAGA+AGG | - | chr3_1:66941706-66941725 | Msa0369620:three_prime_UTR | 60.0% | |
| GGAATCGCCACCGAAGAAGG+TGG | - | chr3_1:66941709-66941728 | Msa0369620:three_prime_UTR | 60.0% | |
| ACAGGCTCCACCTTCTTCGG+TGG | + | chr3_1:66941719-66941738 | None:intergenic | 60.0% | |
| ACCGAAGAAGGTGGAGCCTG+TGG | - | chr3_1:66941718-66941737 | Msa0369620:three_prime_UTR | 60.0% | |
| ! | TCGCCGATTGCACTCATCGG+TGG | - | chr3_1:66941768-66941787 | Msa0369620:intron | 60.0% |
| ACAAAAGAGGGGCAAGGGGC+AGG | - | chr3_1:66942483-66942502 | Msa0369620:intron | 60.0% | |
| CAAAAGAGGGGCAAGGGGCA+GGG | - | chr3_1:66942484-66942503 | Msa0369620:intron | 60.0% | |
| AAAAGAGGGGCAAGGGGCAG+GGG | - | chr3_1:66942485-66942504 | Msa0369620:intron | 60.0% | |
| CTCCCTCCGCCCTTGCATTT+GGG | - | chr3_1:66942534-66942553 | Msa0369620:intron | 60.0% | |
| TCCCTCCGCCCTTGCATTTG+GGG | - | chr3_1:66942535-66942554 | Msa0369620:intron | 60.0% | |
| AGACCCACAGCTGCACTTGC+AGG | - | chr3_1:66942962-66942981 | Msa0369620:intron | 60.0% | |
| CAGCCTGCAAGTGCAGCTGT+GGG | + | chr3_1:66942968-66942987 | None:intergenic | 60.0% | |
| !! | GCTGGGCGCTGCACCTATTT+TGG | - | chr3_1:66943921-66943940 | Msa0369620:CDS | 60.0% |
| GAGGTCAGGCAACTGAGCGT+TGG | - | chr3_1:66944075-66944094 | Msa0369620:intron | 60.0% | |
| AGTGCAATCGGCGACCACCC+TGG | + | chr3_1:66941762-66941781 | None:intergenic | 65.0% | |
| GCTCCCTCCGCCCTTGCATT+TGG | - | chr3_1:66942533-66942552 | Msa0369620:intron | 65.0% | |
| CCCCCAAATGCAAGGGCGGA+GGG | + | chr3_1:66942539-66942558 | None:intergenic | 65.0% | |
| CCCTCCGCCCTTGCATTTGG+GGG | - | chr3_1:66942536-66942555 | Msa0369620:intron | 65.0% | |
| ACCCCCAAATGCAAGGGCGG+AGG | + | chr3_1:66942540-66942559 | None:intergenic | 65.0% | |
| CGCACCCCCAAATGCAAGGG+CGG | + | chr3_1:66942543-66942562 | None:intergenic | 65.0% | |
| CGCCCTTGCATTTGGGGGTG+CGG | - | chr3_1:66942541-66942560 | Msa0369620:intron | 65.0% | |
| ! | GCCCTTGCATTTGGGGGTGC+GGG | - | chr3_1:66942542-66942561 | Msa0369620:intron | 65.0% |
| CCCCGCACCCCCAAATGCAA+GGG | + | chr3_1:66942546-66942565 | None:intergenic | 65.0% | |
| ! | CCCTTGCATTTGGGGGTGCG+GGG | - | chr3_1:66942543-66942562 | Msa0369620:intron | 65.0% |
| ! | CCTTGCATTTGGGGGTGCGG+GGG | - | chr3_1:66942544-66942563 | Msa0369620:intron | 65.0% |
| GCAGCCTGCAAGTGCAGCTG+TGG | + | chr3_1:66942969-66942988 | None:intergenic | 65.0% | |
| CCCCCGCACCCCCAAATGCA+AGG | + | chr3_1:66942547-66942566 | None:intergenic | 70.0% | |
| GGGCGATAGCCCCCACGGTA+CGG | - | chr3_1:66942564-66942583 | Msa0369620:intron | 70.0% | |
| GGCGATAGCCCCCACGGTAC+GGG | - | chr3_1:66942565-66942584 | Msa0369620:intron | 70.0% | |
| ATGCCCCTGGCCCGTACCGT+GGG | + | chr3_1:66942578-66942597 | None:intergenic | 70.0% | |
| AATGCCCCTGGCCCGTACCG+TGG | + | chr3_1:66942579-66942598 | None:intergenic | 70.0% | |
| TGCGGGGGCGATAGCCCCCA+CGG | - | chr3_1:66942559-66942578 | Msa0369620:intron | 75.0% | |
| TAGCCCCCACGGTACGGGCC+AGG | - | chr3_1:66942570-66942589 | Msa0369620:intron | 75.0% | |
| AGCCCCCACGGTACGGGCCA+GGG | - | chr3_1:66942571-66942590 | Msa0369620:intron | 75.0% | |
| TGCCCCTGGCCCGTACCGTG+GGG | + | chr3_1:66942577-66942596 | None:intergenic | 75.0% | |
| ! | GCCCCCACGGTACGGGCCAG+GGG | - | chr3_1:66942572-66942591 | Msa0369620:intron | 80.0% |
| ! | GCCCCTGGCCCGTACCGTGG+GGG | + | chr3_1:66942576-66942595 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 66941350 | 66945686 | 66941350 | ID=Msa0369620;Name=Msa0369620 |
| chr3_1 | mRNA | 66941350 | 66945686 | 66941350 | ID=Msa0369620-mRNA-1;Parent=Msa0369620;Name=Msa0369620-mRNA-1;_AED=0.03;_eAED=0.03;_QI=195|1|1|1|0.66|0.5|4|403|158 |
| chr3_1 | exon | 66941350 | 66941737 | 66941350 | ID=Msa0369620-mRNA-1:exon:13667;Parent=Msa0369620-mRNA-1 |
| chr3_1 | exon | 66943724 | 66943794 | 66943724 | ID=Msa0369620-mRNA-1:exon:13666;Parent=Msa0369620-mRNA-1 |
| chr3_1 | exon | 66943878 | 66943947 | 66943878 | ID=Msa0369620-mRNA-1:exon:13665;Parent=Msa0369620-mRNA-1 |
| chr3_1 | exon | 66945141 | 66945686 | 66945141 | ID=Msa0369620-mRNA-1:exon:13664;Parent=Msa0369620-mRNA-1 |
| chr3_1 | five_prime_UTR | 66945492 | 66945686 | 66945492 | ID=Msa0369620-mRNA-1:five_prime_utr;Parent=Msa0369620-mRNA-1 |
| chr3_1 | CDS | 66945141 | 66945491 | 66945141 | ID=Msa0369620-mRNA-1:cds;Parent=Msa0369620-mRNA-1 |
| chr3_1 | CDS | 66943878 | 66943947 | 66943878 | ID=Msa0369620-mRNA-1:cds;Parent=Msa0369620-mRNA-1 |
| chr3_1 | CDS | 66943739 | 66943794 | 66943739 | ID=Msa0369620-mRNA-1:cds;Parent=Msa0369620-mRNA-1 |
| chr3_1 | three_prime_UTR | 66943724 | 66943738 | 66943724 | ID=Msa0369620-mRNA-1:three_prime_utr;Parent=Msa0369620-mRNA-1 |
| chr3_1 | three_prime_UTR | 66941350 | 66941737 | 66941350 | ID=Msa0369620-mRNA-1:three_prime_utr;Parent=Msa0369620-mRNA-1 |
| Gene Sequence |
| Protein sequence |
