Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0417040 | XP_003601009.1 | 95.541 | 157 | 5 | 1 | 1 | 157 | 1 | 155 | 5.26e-104 | 304 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0417040 | G7J2F5 | 95.541 | 157 | 5 | 1 | 1 | 157 | 1 | 155 | 2.51e-104 | 304 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0115270 | Msa0417040 | 0.800241 | 1.580656e-48 | -8.615850e-47 |
| Msa0178960 | Msa0417040 | 0.805152 | 1.532448e-49 | -8.615850e-47 |
| Msa0226890 | Msa0417040 | 0.811020 | 8.624449e-51 | -8.615850e-47 |
| Msa0369460 | Msa0417040 | 0.807078 | 6.026087e-50 | -8.615850e-47 |
| Msa0369620 | Msa0417040 | 0.957347 | 3.377289e-115 | -8.615850e-47 |
| Msa0412970 | Msa0417040 | 0.831134 | 1.983321e-55 | -8.615850e-47 |
| Msa0417040 | Msa0421780 | -0.815374 | 9.553135e-52 | -8.615850e-47 |
| Msa0417040 | Msa0467900 | -0.823781 | 1.151352e-53 | -8.615850e-47 |
| Msa0417040 | Msa0467960 | -0.802480 | 5.499870e-49 | -8.615850e-47 |
| Msa0417040 | Msa0509390 | 0.816983 | 4.174524e-52 | -8.615850e-47 |
| Msa0417040 | Msa0519220 | 0.801873 | 7.332847e-49 | -8.615850e-47 |
| Msa0417040 | Msa0562440 | 0.806305 | 8.772789e-50 | -8.615850e-47 |
| Msa0417040 | Msa0647450 | -0.818654 | 1.750997e-52 | -8.615850e-47 |
| Msa0417040 | Msa0728630 | 0.804190 | 2.432464e-49 | -8.615850e-47 |
| Msa0417040 | Msa1034300 | 0.806232 | 9.091844e-50 | -8.615850e-47 |
| Msa0417040 | Msa1043920 | 0.812313 | 4.514060e-51 | -8.615850e-47 |
| Msa0417040 | Msa1271210 | 0.806131 | 9.547204e-50 | -8.615850e-47 |
| Msa0417040 | Msa1284220 | 0.807650 | 4.556566e-50 | -8.615850e-47 |
| Msa0417040 | Msa1335860 | 0.817742 | 2.816090e-52 | -8.615850e-47 |
| Msa0417040 | Msa1348950 | 0.802629 | 5.124616e-49 | -8.615850e-47 |
| Msa0417040 | Msa1358960 | 0.838052 | 3.616698e-57 | -8.615850e-47 |
| Msa0417040 | Msa1419800 | -0.808427 | 3.114217e-50 | -8.615850e-47 |
| Msa0288100 | Msa0417040 | 0.807377 | 5.207041e-50 | -8.615850e-47 |
| Msa0302580 | Msa0417040 | -0.808850 | 2.528927e-50 | -8.615850e-47 |
| Msa0350990 | Msa0417040 | 0.802381 | 5.762570e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0417040 | MtrunA17_Chr3g0114281 | 95.541 | 157 | 5 | 1 | 1 | 157 | 1 | 155 | 4.84e-108 | 304 |
| Msa0417040 | MtrunA17_Chr0c32g0494171 | 62.921 | 89 | 33 | 0 | 68 | 156 | 12 | 100 | 1.24e-38 | 127 |
| Msa0417040 | MtrunA17_Chr7g0243961 | 62.921 | 89 | 33 | 0 | 68 | 156 | 12 | 100 | 1.24e-38 | 127 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0417040 | AT5G05360.1 | 44.910 | 167 | 75 | 6 | 1 | 154 | 1 | 163 | 1.31e-42 | 139 |
| Msa0417040 | AT5G05360.2 | 44.156 | 154 | 69 | 6 | 1 | 141 | 1 | 150 | 9.26e-37 | 124 |
| Msa0417040 | AT2G38450.1 | 60.494 | 81 | 32 | 0 | 69 | 149 | 55 | 135 | 7.23e-32 | 111 |
| Msa0417040 | AT2G38450.2 | 59.184 | 49 | 20 | 0 | 69 | 117 | 55 | 103 | 9.65e-16 | 69.7 |
Find 53 sgRNAs with CRISPR-Local
Find 330 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTGCGGTCTTGTTGTTTCT+TGG | 0.311175 | 3_2:+64119251 | None:intergenic |
| GATACGGGTTGGGTTTGTTT+TGG | 0.339121 | 3_2:+64119309 | None:intergenic |
| TCCACAGGCTCCACCTTCTT+CGG | 0.351408 | 3_2:+64119207 | None:intergenic |
| CAAATGTATTGCTCTGGATA+TGG | 0.370151 | 3_2:-64119075 | Msa0417040:CDS |
| TTGCAGTTGCAGCGATGAAC+TGG | 0.405296 | 3_2:+64119280 | None:intergenic |
| AAACTCGAATTGCTCTTTCC+AGG | 0.409919 | 3_2:-64119185 | Msa0417040:CDS |
| CAAGAAGTCGAAATTCAGTT+TGG | 0.410256 | 3_2:-64117812 | Msa0417040:CDS |
| GTACATCAATGCACGTTTCT+CGG | 0.413538 | 3_2:-64115189 | Msa0417040:three_prime_UTR |
| CTAGAAATTGTTACAATTCG+AGG | 0.415091 | 3_2:+64119500 | None:intergenic |
| GTGGTTTCACGATACGCTTA+AGG | 0.417498 | 3_2:-64119139 | Msa0417040:CDS |
| CTGGTTCAATGATACGGGTT+GGG | 0.430102 | 3_2:+64119299 | None:intergenic |
| CTTTCAAGTCAAGTTCTTGT+TGG | 0.438409 | 3_2:-64119099 | Msa0417040:CDS |
| ACAAGACCGCACTGTTGTTA+AGG | 0.443164 | 3_2:-64119241 | Msa0417040:CDS |
| TGATTCGGATTCAAGTGAAA+TGG | 0.478803 | 3_2:-64117671 | Msa0417040:CDS |
| GTTGGTCAAATGTATTGCTC+TGG | 0.481330 | 3_2:-64119081 | Msa0417040:CDS |
| GTATCCTTAACTCTCTTCAT+CGG | 0.497537 | 3_2:-64115124 | Msa0417040:three_prime_UTR |
| GGTGGAATCGCCACCGAAGA+AGG | 0.500729 | 3_2:-64119220 | Msa0417040:CDS |
| TACTTAGTTTGTAAGTATGA+AGG | 0.501423 | 3_2:-64117635 | Msa0417040:intron |
| AGGTTATAGAGCAAGTGATT+CGG | 0.501656 | 3_2:-64117686 | Msa0417040:CDS |
| AACTCGAATTGCTCTTTCCA+GGG | 0.508867 | 3_2:-64119184 | Msa0417040:CDS |
| TATCCTTAACTCTCTTCATC+GGG | 0.513073 | 3_2:-64115123 | Msa0417040:three_prime_UTR |
| GATGAACTGGTTCAATGATA+CGG | 0.513998 | 3_2:+64119293 | None:intergenic |
| CCGCCCGATGAAGAGAGTTA+AGG | 0.516752 | 3_2:+64115120 | None:intergenic |
| GCGGTCTTGTTGTTTCTTGG+TGG | 0.525060 | 3_2:+64119254 | None:intergenic |
| TTCTTGTCGCACAGAGTCAA+AGG | 0.533961 | 3_2:+64119371 | None:intergenic |
| TGTAAGTAGCAGTGTTGCAA+TGG | 0.540163 | 3_2:-64114936 | Msa0417040:three_prime_UTR |
| AAACCACCGATGAGTGCAAT+CGG | 0.543960 | 3_2:+64119155 | None:intergenic |
| ATGAACTGGTTCAATGATAC+GGG | 0.546395 | 3_2:+64119294 | None:intergenic |
| AGTGCAATCGGCGACCACCC+TGG | 0.552841 | 3_2:+64119167 | None:intergenic |
| TCAGTGCCTTGTTGATGAAG+AGG | 0.557735 | 3_2:-64115079 | Msa0417040:three_prime_UTR |
| TGTTTCTAGAAATCCTCAAA+AGG | 0.559783 | 3_2:-64119052 | Msa0417040:intron |
| ACTGGTTCAATGATACGGGT+TGG | 0.564172 | 3_2:+64119298 | None:intergenic |
| ACCGAAGAAGGTGGAGCCTG+TGG | 0.570187 | 3_2:-64119208 | Msa0417040:CDS |
| ACGCTTAAGGAGGCTAAACG+TGG | 0.571473 | 3_2:-64119126 | Msa0417040:CDS |
| TGGTCGCCGATTGCACTCAT+CGG | 0.571547 | 3_2:-64119161 | Msa0417040:CDS |
| ACAGGCTCCACCTTCTTCGG+TGG | 0.573283 | 3_2:+64119210 | None:intergenic |
| AGAGCAATTCGAGTTTCCAC+AGG | 0.580147 | 3_2:+64119192 | None:intergenic |
| CGCTTAAGGAGGCTAAACGT+GGG | 0.586241 | 3_2:-64119125 | Msa0417040:CDS |
| ATAGATATTATCAAACATGT+AGG | 0.590986 | 3_2:+64119471 | None:intergenic |
| ACTTGCAGCAAACTCATACA+AGG | 0.611154 | 3_2:+64115043 | None:intergenic |
| TTCGGATTCAAGTGAAATGG+AGG | 0.617025 | 3_2:-64117668 | Msa0417040:CDS |
| TCGCCGATTGCACTCATCGG+TGG | 0.618704 | 3_2:-64119158 | Msa0417040:CDS |
| GGAATCGCCACCGAAGAAGG+TGG | 0.624182 | 3_2:-64119217 | Msa0417040:CDS |
| TGTGTTTATAGGGACATGCA+TGG | 0.630942 | 3_2:-64117848 | Msa0417040:intron |
| AGACCGCACTGTTGTTAAGG+TGG | 0.642343 | 3_2:-64119238 | Msa0417040:CDS |
| CCTTAACTCTCTTCATCGGG+CGG | 0.646767 | 3_2:-64115120 | Msa0417040:three_prime_UTR |
| GTTTCACGATACGCTTAAGG+AGG | 0.650532 | 3_2:-64119136 | Msa0417040:CDS |
| TCGAATTGCTCTTTCCAGGG+TGG | 0.674129 | 3_2:-64119181 | Msa0417040:CDS |
| GAAGTTACACTACAGACAGA+CGG | 0.688019 | 3_2:-64119573 | Msa0417040:five_prime_UTR |
| ACACTTCCTCTTCATCAACA+AGG | 0.689850 | 3_2:+64115073 | None:intergenic |
| GCTTAAGGAGGCTAAACGTG+GGG | 0.707744 | 3_2:-64119124 | Msa0417040:CDS |
| AACGAATAAACAGAGAGCAG+CGG | 0.712077 | 3_2:+64115229 | None:intergenic |
| ATTCCACCTTAACAACAGTG+CGG | 0.796242 | 3_2:+64119235 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTATATGCTCTAAATAA+TGG | - | chr3_2:64117181-64117200 | Msa0417040:intron | 15.0% |
| !!! | ATAGAAAAAATGGTATTTTT+AGG | + | chr3_2:64118808-64118827 | None:intergenic | 15.0% |
| !!! | AAAATACCATTTTTTCTATA+AGG | - | chr3_2:64118809-64118828 | Msa0417040:intron | 15.0% |
| !!! | AAATGGTTTATTTTTATTCT+GGG | + | chr3_2:64118843-64118862 | None:intergenic | 15.0% |
| !!! | TAAATGGTTTATTTTTATTC+TGG | + | chr3_2:64118844-64118863 | None:intergenic | 15.0% |
| !! | CATTATTAGAAATATAAATC+AGG | + | chr3_2:64119188-64119207 | None:intergenic | 15.0% |
| !! | ATAGATATTATCAAACATGT+AGG | + | chr3_2:64114987-64115006 | None:intergenic | 20.0% |
| !!! | TTAGCAACAATTTGATTTTA+TGG | - | chr3_2:64115673-64115692 | Msa0417040:intron | 20.0% |
| !! | TTGGATTAACAACTTAATTA+AGG | + | chr3_2:64115811-64115830 | None:intergenic | 20.0% |
| !! | CTCAACAATTATAACAAAAA+GGG | + | chr3_2:64115974-64115993 | None:intergenic | 20.0% |
| !! | ACTCAACAATTATAACAAAA+AGG | + | chr3_2:64115975-64115994 | None:intergenic | 20.0% |
| !! | TTGTTATCTACTTTCAAATA+TGG | - | chr3_2:64116352-64116371 | Msa0417040:intron | 20.0% |
| !! | ATTGACGGTAAAATATTATA+CGG | + | chr3_2:64116433-64116452 | None:intergenic | 20.0% |
| !! | AAACAAAATAAGAAACAATC+AGG | + | chr3_2:64116743-64116762 | None:intergenic | 20.0% |
| !!! | TTCTTATTTTGTTTACATAC+AGG | - | chr3_2:64116749-64116768 | Msa0417040:intron | 20.0% |
| !! | TAGTATAATTCTCAATTCTT+TGG | - | chr3_2:64117255-64117274 | Msa0417040:intron | 20.0% |
| !!! | AGTCTTATTAAACATTATCA+GGG | + | chr3_2:64117691-64117710 | None:intergenic | 20.0% |
| !!! | AAGTCTTATTAAACATTATC+AGG | + | chr3_2:64117692-64117711 | None:intergenic | 20.0% |
| !! | AATACCATCAAAATATGAAT+TGG | - | chr3_2:64118002-64118021 | Msa0417040:intron | 20.0% |
| !!! | TTAACCAATTCATATTTTGA+TGG | + | chr3_2:64118009-64118028 | None:intergenic | 20.0% |
| !! | CTAATTCCTTATAGAAAAAA+TGG | + | chr3_2:64118818-64118837 | None:intergenic | 20.0% |
| !!! | CATTTTTTCTATAAGGAATT+AGG | - | chr3_2:64118816-64118835 | Msa0417040:intron | 20.0% |
| !!! | AATGGTTTATTTTTATTCTG+GGG | + | chr3_2:64118842-64118861 | None:intergenic | 20.0% |
| !! | TTATCATTAATGATTGAACT+CGG | + | chr3_2:64118935-64118954 | None:intergenic | 20.0% |
| !! | AAAAGAATGACGTATATTAT+TGG | - | chr3_2:64118956-64118975 | Msa0417040:intron | 20.0% |
| !!! | TCTTTAAGGTTTTAATATAG+AGG | - | chr3_2:64119162-64119181 | Msa0417040:CDS | 20.0% |
| !!! | TCTTGTCTTGTTTATTTTCA+TGG | - | chr3_2:64115055-64115074 | Msa0417040:three_prime_UTR | 25.0% |
| !! | AGAAAAAAAAAGACCTTTTG+AGG | + | chr3_2:64115419-64115438 | None:intergenic | 25.0% |
| ! | ACACTAATGTGAAATGATAT+AGG | - | chr3_2:64115482-64115501 | Msa0417040:intron | 25.0% |
| ! | CACTAATGTGAAATGATATA+GGG | - | chr3_2:64115483-64115502 | Msa0417040:intron | 25.0% |
| ! | TATAGGGTTTATTACTTGTT+AGG | - | chr3_2:64115499-64115518 | Msa0417040:intron | 25.0% |
| ! | TCATAACTCATAAGACATTT+GGG | - | chr3_2:64115548-64115567 | Msa0417040:intron | 25.0% |
| !!! | TACTTTTGTTATGTCATGTT+TGG | + | chr3_2:64115830-64115849 | None:intergenic | 25.0% |
| ! | CAATATTGGAATCAAATTGT+CGG | + | chr3_2:64115862-64115881 | None:intergenic | 25.0% |
| ! | AGTGAAGAATAACACAATAT+TGG | + | chr3_2:64115876-64115895 | None:intergenic | 25.0% |
| ! | ACAAGGCATATATAATACTA+CGG | + | chr3_2:64116144-64116163 | None:intergenic | 25.0% |
| ! | ATTAGTACTTGAGTGAATTA+GGG | + | chr3_2:64116178-64116197 | None:intergenic | 25.0% |
| ! | TATTAGTACTTGAGTGAATT+AGG | + | chr3_2:64116179-64116198 | None:intergenic | 25.0% |
| ! | TTCACTCAAGTACTAATATA+TGG | - | chr3_2:64116181-64116200 | Msa0417040:intron | 25.0% |
| ! | AGTACTAATATATGGAACTA+TGG | - | chr3_2:64116189-64116208 | Msa0417040:intron | 25.0% |
| !! | GTTCTAACAATTTGTTTATC+AGG | - | chr3_2:64116326-64116345 | Msa0417040:intron | 25.0% |
| !!! | TTTTGTTGTAATCCAAATTC+TGG | - | chr3_2:64116406-64116425 | Msa0417040:intron | 25.0% |
| ! | TGTTACAAACTGTGTTTATA+GGG | - | chr3_2:64116597-64116616 | Msa0417040:intron | 25.0% |
| !!! | TACTTAGTTTGTAAGTATGA+AGG | - | chr3_2:64116820-64116839 | Msa0417040:intron | 25.0% |
| !! | TTGCTTGTTCTTATTTACTT+CGG | - | chr3_2:64116941-64116960 | Msa0417040:intron | 25.0% |
| ! | CATAGTTTAATCTTGTTAAC+CGG | - | chr3_2:64116973-64116992 | Msa0417040:intron | 25.0% |
| ! | ATAGTTTAATCTTGTTAACC+GGG | - | chr3_2:64116974-64116993 | Msa0417040:intron | 25.0% |
| ! | GAACAGCTAAATTTAAAGAA+TGG | + | chr3_2:64117023-64117042 | None:intergenic | 25.0% |
| !! | TTTTCGATTATTATACGACA+AGG | + | chr3_2:64117065-64117084 | None:intergenic | 25.0% |
| !!! | AATCTGAAGCTTTAAGAAAA+AGG | + | chr3_2:64117151-64117170 | None:intergenic | 25.0% |
| !! | ATTATACTAGATGAAAGCAT+CGG | + | chr3_2:64117244-64117263 | None:intergenic | 25.0% |
| ! | AAACCAAATACAACCAAAAT+AGG | + | chr3_2:64117466-64117485 | None:intergenic | 25.0% |
| !! | GTATGATCATAAGCTTTAAT+CGG | - | chr3_2:64117554-64117573 | Msa0417040:intron | 25.0% |
| ! | TAGATAACGACATATTAACA+AGG | + | chr3_2:64117848-64117867 | None:intergenic | 25.0% |
| ! | TGTTAATATGTCGTTATCTA+AGG | - | chr3_2:64117848-64117867 | Msa0417040:intron | 25.0% |
| !!! | TCATATTTTGATGGTATTTC+TGG | + | chr3_2:64118000-64118019 | None:intergenic | 25.0% |
| ! | CAAATGCTTAAATACGTTTA+AGG | - | chr3_2:64118221-64118240 | Msa0417040:intron | 25.0% |
| ! | AAAAATTGTATTGGAGGATT+TGG | + | chr3_2:64118495-64118514 | None:intergenic | 25.0% |
| ! | GAACTAAAAAATTGTATTGG+AGG | + | chr3_2:64118501-64118520 | None:intergenic | 25.0% |
| ! | GAGGAACTAAAAAATTGTAT+TGG | + | chr3_2:64118504-64118523 | None:intergenic | 25.0% |
| ! | AACCATTTAGTATAGCTAAA+TGG | - | chr3_2:64118855-64118874 | Msa0417040:intron | 25.0% |
| !! | TTAAAACCTTAAAGAGTACA+TGG | + | chr3_2:64119157-64119176 | None:intergenic | 25.0% |
| CTAGAAATTGTTACAATTCG+AGG | + | chr3_2:64114958-64114977 | None:intergenic | 30.0% | |
| !! | TGTTTCTAGAAATCCTCAAA+AGG | - | chr3_2:64115403-64115422 | Msa0417040:intron | 30.0% |
| GTCATAACTCATAAGACATT+TGG | - | chr3_2:64115547-64115566 | Msa0417040:intron | 30.0% | |
| ! | ATAAGACATTTGGGATTGTT+TGG | - | chr3_2:64115557-64115576 | Msa0417040:intron | 30.0% |
| ! | TAAGACATTTGGGATTGTTT+GGG | - | chr3_2:64115558-64115577 | Msa0417040:intron | 30.0% |
| ! | AAGTCTTATCTCACTAAGTT+GGG | + | chr3_2:64115722-64115741 | None:intergenic | 30.0% |
| ATATTATACGGACCAGAATT+TGG | + | chr3_2:64116421-64116440 | None:intergenic | 30.0% | |
| ! | TTTTACCGTCAATTGCATTT+TGG | - | chr3_2:64116440-64116459 | Msa0417040:intron | 30.0% |
| ! | TTTACCGTCAATTGCATTTT+GGG | - | chr3_2:64116441-64116460 | Msa0417040:intron | 30.0% |
| AACCAATAAGTTTATGAGCA+GGG | + | chr3_2:64116557-64116576 | None:intergenic | 30.0% | |
| GTGTTACAAACTGTGTTTAT+AGG | - | chr3_2:64116596-64116615 | Msa0417040:intron | 30.0% | |
| GTTTGTAAGTATGAAGGTAA+TGG | - | chr3_2:64116826-64116845 | Msa0417040:intron | 30.0% | |
| AATTAAGTAGAACAATTGCC+CGG | + | chr3_2:64116995-64117014 | None:intergenic | 30.0% | |
| ATACTAACCAGTAGTATGAT+TGG | - | chr3_2:64117360-64117379 | Msa0417040:intron | 30.0% | |
| TCACTATTGTAAGTCCTTAA+GGG | - | chr3_2:64117582-64117601 | Msa0417040:intron | 30.0% | |
| !! | ATTTGGAGTGTTTTATGTCT+AGG | - | chr3_2:64117632-64117651 | Msa0417040:intron | 30.0% |
| ACGCTTAAATATCATCTTGT+TGG | + | chr3_2:64117747-64117766 | None:intergenic | 30.0% | |
| ATTTAAGCGTATTTGCCTTA+TGG | - | chr3_2:64117757-64117776 | Msa0417040:intron | 30.0% | |
| TTTAAGCGTATTTGCCTTAT+GGG | - | chr3_2:64117758-64117777 | Msa0417040:intron | 30.0% | |
| TCGATTGAACAAAATGATGT+TGG | - | chr3_2:64117808-64117827 | Msa0417040:CDS | 30.0% | |
| TTGCTTCAAACATACATGTT+TGG | - | chr3_2:64118061-64118080 | Msa0417040:intron | 30.0% | |
| ! | GCTTAAATACGTTTAAGGTT+AGG | - | chr3_2:64118226-64118245 | Msa0417040:intron | 30.0% |
| !!! | TTTTTTAGTTCCTCCAAATG+AGG | - | chr3_2:64118510-64118529 | Msa0417040:intron | 30.0% |
| TGGAAGAAATAGAGGAAAAT+GGG | + | chr3_2:64118581-64118600 | None:intergenic | 30.0% | |
| ATAGCATGAAAAAAGGCAAT+AGG | + | chr3_2:64118722-64118741 | None:intergenic | 30.0% | |
| CTACGTAATAGCATGAAAAA+AGG | + | chr3_2:64118729-64118748 | None:intergenic | 30.0% | |
| CTAAATGGCGTATATAAATG+TGG | - | chr3_2:64118870-64118889 | Msa0417040:intron | 30.0% | |
| ! | AAATGCTCTACTTTGAAGAT+TGG | - | chr3_2:64118994-64119013 | Msa0417040:intron | 30.0% |
| ! | GCTTTTATCTCTCATAAAAC+AGG | - | chr3_2:64119060-64119079 | Msa0417040:CDS | 30.0% |
| CACTTTGTAAGTAAATCCTT+TGG | - | chr3_2:64119084-64119103 | Msa0417040:CDS | 30.0% | |
| ! | ATGAACTGGTTCAATGATAC+GGG | + | chr3_2:64115164-64115183 | None:intergenic | 35.0% |
| ! | GATGAACTGGTTCAATGATA+CGG | + | chr3_2:64115165-64115184 | None:intergenic | 35.0% |
| ! | CTTTCAAGTCAAGTTCTTGT+TGG | - | chr3_2:64115356-64115375 | Msa0417040:intron | 35.0% |
| ! | CAAATGTATTGCTCTGGATA+TGG | - | chr3_2:64115380-64115399 | Msa0417040:intron | 35.0% |
| ! | CGTTTTCAGCTTATTTCAGT+AGG | - | chr3_2:64115621-64115640 | Msa0417040:intron | 35.0% |
| ! | CAAGTCTTATCTCACTAAGT+TGG | + | chr3_2:64115723-64115742 | None:intergenic | 35.0% |
| ! | TGTGTTATTCTTCACTGCTT+TGG | - | chr3_2:64115880-64115899 | Msa0417040:intron | 35.0% |
| ! | AAGAAAATTTTCCAACCTCC+CGG | + | chr3_2:64115932-64115951 | None:intergenic | 35.0% |
| TTCATACACAGACACAAAAG+AGG | - | chr3_2:64115999-64116018 | Msa0417040:intron | 35.0% | |
| TCATACACAGACACAAAAGA+GGG | - | chr3_2:64116000-64116019 | Msa0417040:intron | 35.0% | |
| TTAGGGTTTACAGTACTACA+AGG | + | chr3_2:64116161-64116180 | None:intergenic | 35.0% | |
| ATAACGCAAATCGCAAACAA+TGG | + | chr3_2:64116281-64116300 | None:intergenic | 35.0% | |
| AGAACCCAAAATGCAATTGA+CGG | + | chr3_2:64116448-64116467 | None:intergenic | 35.0% | |
| TTCCCTGCTCATAAACTTAT+TGG | - | chr3_2:64116552-64116571 | Msa0417040:intron | 35.0% | |
| GAACCAATAAGTTTATGAGC+AGG | + | chr3_2:64116558-64116577 | None:intergenic | 35.0% | |
| ACACAGTTTGTAACACAGTA+TGG | + | chr3_2:64116592-64116611 | None:intergenic | 35.0% | |
| CAAGAAGTCGAAATTCAGTT+TGG | - | chr3_2:64116643-64116662 | Msa0417040:intron | 35.0% | |
| AGGTTATAGAGCAAGTGATT+CGG | - | chr3_2:64116769-64116788 | Msa0417040:intron | 35.0% | |
| ! | TGATTCGGATTCAAGTGAAA+TGG | - | chr3_2:64116784-64116803 | Msa0417040:intron | 35.0% |
| GGGCAATTGTTCTACTTAAT+TGG | - | chr3_2:64116994-64117013 | Msa0417040:intron | 35.0% | |
| TTAGCTGTTCATTTCCACAA+AGG | - | chr3_2:64117033-64117052 | Msa0417040:intron | 35.0% | |
| AAACAAAACAACACTCGTCT+AGG | + | chr3_2:64117128-64117147 | None:intergenic | 35.0% | |
| ATAATGGTTACCCTCTATCT+AGG | - | chr3_2:64117197-64117216 | Msa0417040:intron | 35.0% | |
| CTAACATAGTCCTAGATAGA+GGG | + | chr3_2:64117210-64117229 | None:intergenic | 35.0% | |
| ACTAACATAGTCCTAGATAG+AGG | + | chr3_2:64117211-64117230 | None:intergenic | 35.0% | |
| ! | TCATACTACTGGTTAGTATC+AGG | + | chr3_2:64117359-64117378 | None:intergenic | 35.0% |
| CAGTAGTATGATTGGTATCT+GGG | - | chr3_2:64117368-64117387 | Msa0417040:intron | 35.0% | |
| !!! | GCACCTATTTTGGTTGTATT+TGG | - | chr3_2:64117460-64117479 | Msa0417040:intron | 35.0% |
| AAAAGCTGCCTGATAATAAC+TGG | - | chr3_2:64117503-64117522 | Msa0417040:intron | 35.0% | |
| AAAGCTGCCTGATAATAACT+GGG | - | chr3_2:64117504-64117523 | Msa0417040:intron | 35.0% | |
| TCATACTCCCAGTTATTATC+AGG | + | chr3_2:64117514-64117533 | None:intergenic | 35.0% | |
| CTCACTATTGTAAGTCCTTA+AGG | - | chr3_2:64117581-64117600 | Msa0417040:intron | 35.0% | |
| !! | ACTGAGCGTTGGAATTTATT+TGG | - | chr3_2:64117615-64117634 | Msa0417040:intron | 35.0% |
| GTACGATCACAAAGTGTATT+TGG | - | chr3_2:64117662-64117681 | Msa0417040:CDS | 35.0% | |
| TTAGTAGCAAGCTGAAATAG+AGG | - | chr3_2:64117892-64117911 | Msa0417040:intron | 35.0% | |
| TAGTAGCAAGCTGAAATAGA+GGG | - | chr3_2:64117893-64117912 | Msa0417040:intron | 35.0% | |
| GAATTGGTTAATACCTGTGA+TGG | - | chr3_2:64118018-64118037 | Msa0417040:intron | 35.0% | |
| ATACATGTTTGGAAATCCGT+TGG | - | chr3_2:64118072-64118091 | Msa0417040:intron | 35.0% | |
| CATGTCTATCATACTGCAAT+TGG | + | chr3_2:64118101-64118120 | None:intergenic | 35.0% | |
| AATGCTACGCTACATACATT+AGG | - | chr3_2:64118129-64118148 | Msa0417040:intron | 35.0% | |
| GTTAACAGTTCTCTATGGTT+TGG | + | chr3_2:64118187-64118206 | None:intergenic | 35.0% | |
| GCATAGTTAACAGTTCTCTA+TGG | + | chr3_2:64118192-64118211 | None:intergenic | 35.0% | |
| CTTGCTTCTATTAGACTCTA+AGG | - | chr3_2:64118269-64118288 | Msa0417040:intron | 35.0% | |
| !! | TTAGACTCTAAGGCTTTGTT+TGG | - | chr3_2:64118279-64118298 | Msa0417040:intron | 35.0% |
| !! | TAGACTCTAAGGCTTTGTTT+GGG | - | chr3_2:64118280-64118299 | Msa0417040:intron | 35.0% |
| ATTGTATTGGAGGATTTGGA+GGG | + | chr3_2:64118491-64118510 | None:intergenic | 35.0% | |
| AATTGTATTGGAGGATTTGG+AGG | + | chr3_2:64118492-64118511 | None:intergenic | 35.0% | |
| GTGGAAGAAATAGAGGAAAA+TGG | + | chr3_2:64118582-64118601 | None:intergenic | 35.0% | |
| TTCATGCTATTACGTAGCTT+TGG | - | chr3_2:64118732-64118751 | Msa0417040:intron | 35.0% | |
| TCATGCTATTACGTAGCTTT+GGG | - | chr3_2:64118733-64118752 | Msa0417040:intron | 35.0% | |
| !!! | TATTTTTAGGCCTAAAAGCG+AGG | + | chr3_2:64118795-64118814 | None:intergenic | 35.0% |
| CGCCATTTAGCTATACTAAA+TGG | + | chr3_2:64118860-64118879 | None:intergenic | 35.0% | |
| ATGGCGTATATAAATGTGGA+TGG | - | chr3_2:64118874-64118893 | Msa0417040:intron | 35.0% | |
| ! | TGTGTGAGTGTTGTAAACTT+CGG | - | chr3_2:64118906-64118925 | Msa0417040:intron | 35.0% |
| ! | TACTTTGAAGATTGGAGATC+TGG | - | chr3_2:64119002-64119021 | Msa0417040:intron | 35.0% |
| ! | ACTTTGAAGATTGGAGATCT+GGG | - | chr3_2:64119003-64119022 | Msa0417040:intron | 35.0% |
| CAACAACCATGTACTCTTTA+AGG | - | chr3_2:64119148-64119167 | Msa0417040:CDS | 35.0% | |
| GTATCCTTAACTCTCTTCAT+CGG | - | chr3_2:64119331-64119350 | Msa0417040:CDS | 35.0% | |
| TATCCTTAACTCTCTTCATC+GGG | - | chr3_2:64119332-64119351 | Msa0417040:CDS | 35.0% | |
| ATTGAAAAAAGACAGCTGTC+TGG | + | chr3_2:64119461-64119480 | None:intergenic | 35.0% | |
| GAAGTTACACTACAGACAGA+CGG | - | chr3_2:64114882-64114901 | Msa0417040:three_prime_UTR | 40.0% | |
| !!! | GTTGGGTTTGTTTTGGTCTA+TGG | + | chr3_2:64115142-64115161 | None:intergenic | 40.0% |
| ATTCCACCTTAACAACAGTG+CGG | + | chr3_2:64115223-64115242 | None:intergenic | 40.0% | |
| AAACTCGAATTGCTCTTTCC+AGG | - | chr3_2:64115270-64115289 | Msa0417040:intron | 40.0% | |
| AACTCGAATTGCTCTTTCCA+GGG | - | chr3_2:64115271-64115290 | Msa0417040:intron | 40.0% | |
| GTTGGTCAAATGTATTGCTC+TGG | - | chr3_2:64115374-64115393 | Msa0417040:intron | 40.0% | |
| CTTATTTCAGTAGGCTCACT+AGG | - | chr3_2:64115630-64115649 | Msa0417040:intron | 40.0% | |
| ! | CTTATCTCACTAAGTTGGGT+CGG | + | chr3_2:64115718-64115737 | None:intergenic | 40.0% |
| CATACACAGACACAAAAGAG+GGG | - | chr3_2:64116001-64116020 | Msa0417040:intron | 40.0% | |
| TTGTCCGATCTGCTTAAACA+AGG | - | chr3_2:64116246-64116265 | Msa0417040:intron | 40.0% | |
| TGTCCGATCTGCTTAAACAA+GGG | - | chr3_2:64116247-64116266 | Msa0417040:intron | 40.0% | |
| ! | GATCCCTTGTTTAAGCAGAT+CGG | + | chr3_2:64116253-64116272 | None:intergenic | 40.0% |
| TGTGTTTATAGGGACATGCA+TGG | - | chr3_2:64116607-64116626 | Msa0417040:intron | 40.0% | |
| TTCGGATTCAAGTGAAATGG+AGG | - | chr3_2:64116787-64116806 | Msa0417040:intron | 40.0% | |
| CCAGATACCAATCATACTAC+TGG | + | chr3_2:64117370-64117389 | None:intergenic | 40.0% | |
| CCAGTAGTATGATTGGTATC+TGG | - | chr3_2:64117367-64117386 | Msa0417040:intron | 40.0% | |
| ATCTGGGTGTATTCAGTATG+AGG | - | chr3_2:64117384-64117403 | Msa0417040:intron | 40.0% | |
| CTATTGTAAGTCCTTAAGGG+AGG | - | chr3_2:64117585-64117604 | Msa0417040:intron | 40.0% | |
| !! | AAATAGAGGGTGTCCAAACA+GGG | - | chr3_2:64117906-64117925 | Msa0417040:intron | 40.0% |
| TTGGTTAATACCTGTGATGG+TGG | - | chr3_2:64118021-64118040 | Msa0417040:intron | 40.0% | |
| !! | TAAGGCTTTGTTTGGGAGTT+TGG | - | chr3_2:64118287-64118306 | Msa0417040:intron | 40.0% |
| ! | AAGGAAAGGAAAGGCTTTGA+GGG | - | chr3_2:64118315-64118334 | Msa0417040:intron | 40.0% |
| ! | TTTGAGGGGTGCAAAATATG+AGG | - | chr3_2:64118330-64118349 | Msa0417040:intron | 40.0% |
| ! | TTTAGTTCCTCCAAATGAGG+AGG | - | chr3_2:64118513-64118532 | Msa0417040:intron | 40.0% |
| TTAGTTCCTCCAAATGAGGA+GGG | - | chr3_2:64118514-64118533 | Msa0417040:intron | 40.0% | |
| TGATACAAACCCTCCTCATT+TGG | + | chr3_2:64118526-64118545 | None:intergenic | 40.0% | |
| ATAGAGGAAAATGGGAGAGA+GGG | + | chr3_2:64118573-64118592 | None:intergenic | 40.0% | |
| AATAGAGGAAAATGGGAGAG+AGG | + | chr3_2:64118574-64118593 | None:intergenic | 40.0% | |
| TGAGCAAGTGGAAGAAATAG+AGG | + | chr3_2:64118589-64118608 | None:intergenic | 40.0% | |
| GGAAAAAAGGAATGAGCAAG+TGG | + | chr3_2:64118601-64118620 | None:intergenic | 40.0% | |
| !! | TTAGGCTTTGTTTGCGAGTT+TGG | + | chr3_2:64118647-64118666 | None:intergenic | 40.0% |
| AAACTCGCAAACAAAGCCTA+AGG | - | chr3_2:64118646-64118665 | Msa0417040:intron | 40.0% | |
| AACTCGCAAACAAAGCCTAA+GGG | - | chr3_2:64118647-64118666 | Msa0417040:intron | 40.0% | |
| TTAACAGATCCTGATCCCTT+AGG | + | chr3_2:64118665-64118684 | None:intergenic | 40.0% | |
| ! | GATTCTAACCGACTTATGCT+TGG | + | chr3_2:64118773-64118792 | None:intergenic | 40.0% |
| TATAAATGTGGATGGTGCTC+AGG | - | chr3_2:64118882-64118901 | Msa0417040:intron | 40.0% | |
| ! | GTGTGAGTGTTGTAAACTTC+GGG | - | chr3_2:64118907-64118926 | Msa0417040:intron | 40.0% |
| AGAATCATACGTCAAGCCAA+AGG | + | chr3_2:64119103-64119122 | None:intergenic | 40.0% | |
| AACGAATAAACAGAGAGCAG+CGG | + | chr3_2:64119229-64119248 | None:intergenic | 40.0% | |
| GTACATCAATGCACGTTTCT+CGG | - | chr3_2:64119266-64119285 | Msa0417040:CDS | 40.0% | |
| ACACTTCCTCTTCATCAACA+AGG | + | chr3_2:64119385-64119404 | None:intergenic | 40.0% | |
| ACTTGCAGCAAACTCATACA+AGG | + | chr3_2:64119415-64119434 | None:intergenic | 40.0% | |
| TGTAAGTAGCAGTGTTGCAA+TGG | - | chr3_2:64119519-64119538 | Msa0417040:five_prime_UTR | 40.0% | |
| TTCTTGTCGCACAGAGTCAA+AGG | + | chr3_2:64115087-64115106 | None:intergenic | 45.0% | |
| !!! | GATACGGGTTGGGTTTGTTT+TGG | + | chr3_2:64115149-64115168 | None:intergenic | 45.0% |
| CTGGTTCAATGATACGGGTT+GGG | + | chr3_2:64115159-64115178 | None:intergenic | 45.0% | |
| ! | ACTGGTTCAATGATACGGGT+TGG | + | chr3_2:64115160-64115179 | None:intergenic | 45.0% |
| !! | AGTGCGGTCTTGTTGTTTCT+TGG | + | chr3_2:64115207-64115226 | None:intergenic | 45.0% |
| ACAAGACCGCACTGTTGTTA+AGG | - | chr3_2:64115214-64115233 | Msa0417040:three_prime_UTR | 45.0% | |
| ! | AGAGCAATTCGAGTTTCCAC+AGG | + | chr3_2:64115266-64115285 | None:intergenic | 45.0% |
| AAACCACCGATGAGTGCAAT+CGG | + | chr3_2:64115303-64115322 | None:intergenic | 45.0% | |
| GTGGTTTCACGATACGCTTA+AGG | - | chr3_2:64115316-64115335 | Msa0417040:intron | 45.0% | |
| GTTTCACGATACGCTTAAGG+AGG | - | chr3_2:64115319-64115338 | Msa0417040:intron | 45.0% | |
| GGGATTGTTTGGGAGAACTT+AGG | - | chr3_2:64115568-64115587 | Msa0417040:intron | 45.0% | |
| AGGCTCACTAGGATAGCTAA+TGG | - | chr3_2:64115641-64115660 | Msa0417040:intron | 45.0% | |
| !! | CTGCTTTGGAAATGAAGCTG+AGG | - | chr3_2:64115894-64115913 | Msa0417040:intron | 45.0% |
| !! | GGTTCTGAATCTCGTTCAGT+TGG | - | chr3_2:64116462-64116481 | Msa0417040:intron | 45.0% |
| CAACTAAGCGAAAAACCTCC+AGG | - | chr3_2:64116666-64116685 | Msa0417040:intron | 45.0% | |
| ATAAGACAGAGCAGCTTACC+TGG | + | chr3_2:64116687-64116706 | None:intergenic | 45.0% | |
| GTGCAGTTATTGAGCCAGTT+TGG | - | chr3_2:64116707-64116726 | Msa0417040:intron | 45.0% | |
| CAGGACAAGCAAAACCAAAC+TGG | + | chr3_2:64116724-64116743 | None:intergenic | 45.0% | |
| CGACAAGGCATATACCTTTG+TGG | + | chr3_2:64117050-64117069 | None:intergenic | 45.0% | |
| ACTATCAAGTGTCAGTCAGC+TGG | - | chr3_2:64117432-64117451 | Msa0417040:intron | 45.0% | |
| CTATCAAGTGTCAGTCAGCT+GGG | - | chr3_2:64117433-64117452 | Msa0417040:intron | 45.0% | |
| ATTTGCCTTATGGGACGTGA+AGG | - | chr3_2:64117767-64117786 | Msa0417040:intron | 45.0% | |
| AACATCCTTCACGTCCCATA+AGG | + | chr3_2:64117775-64117794 | None:intergenic | 45.0% | |
| !! | GAAATAGAGGGTGTCCAAAC+AGG | - | chr3_2:64117905-64117924 | Msa0417040:intron | 45.0% |
| TTTGCTGCTAACTCCCTGTT+TGG | + | chr3_2:64117922-64117941 | None:intergenic | 45.0% | |
| TTAGCAGCAAACTGGGATCA+AGG | - | chr3_2:64117931-64117950 | Msa0417040:intron | 45.0% | |
| AAACTGGGATCAAGGTGCAT+GGG | - | chr3_2:64117939-64117958 | Msa0417040:intron | 45.0% | |
| TGCATGGGTGAGAATGTAAC+AGG | - | chr3_2:64117954-64117973 | Msa0417040:intron | 45.0% | |
| GCATGGGTGAGAATGTAACA+GGG | - | chr3_2:64117955-64117974 | Msa0417040:intron | 45.0% | |
| GAGAATGTAACAGGGAATGC+TGG | - | chr3_2:64117963-64117982 | Msa0417040:intron | 45.0% | |
| TTCATCTTGTCCACCATCAC+AGG | + | chr3_2:64118034-64118053 | None:intergenic | 45.0% | |
| !! | ATGGTGGACAAGATGAACAG+AGG | - | chr3_2:64118037-64118056 | Msa0417040:intron | 45.0% |
| ATACTGCAATTGGCAGCCAA+CGG | + | chr3_2:64118091-64118110 | None:intergenic | 45.0% | |
| ACGCTACATACATTAGGCAG+TGG | - | chr3_2:64118135-64118154 | Msa0417040:intron | 45.0% | |
| !! | GCTTTGTTTGGGAGTTTGGA+GGG | - | chr3_2:64118291-64118310 | Msa0417040:intron | 45.0% |
| ! | CTTTGTTTGGGAGTTTGGAG+GGG | - | chr3_2:64118292-64118311 | Msa0417040:intron | 45.0% |
| GAAGGAAAGGAAAGGCTTTG+AGG | - | chr3_2:64118314-64118333 | Msa0417040:intron | 45.0% | |
| !! | AGGAAAGGAAAGGCTTTGAG+GGG | - | chr3_2:64118316-64118335 | Msa0417040:intron | 45.0% |
| TACAAACCCTCCTCATTTGG+AGG | + | chr3_2:64118523-64118542 | None:intergenic | 45.0% | |
| AAAATGGGAGAGAGGGCTTT+GGG | + | chr3_2:64118566-64118585 | None:intergenic | 45.0% | |
| ! | CTTTGTTTGCGAGTTTGGAG+GGG | + | chr3_2:64118642-64118661 | None:intergenic | 45.0% |
| !! | GCTTTGTTTGCGAGTTTGGA+GGG | + | chr3_2:64118643-64118662 | None:intergenic | 45.0% |
| CAAACAAAGCCTAAGGGATC+AGG | - | chr3_2:64118653-64118672 | Msa0417040:intron | 45.0% | |
| !! | ATTACGTAGCTTTGGGCAAC+AGG | - | chr3_2:64118740-64118759 | Msa0417040:intron | 45.0% |
| !! | TTACGTAGCTTTGGGCAACA+GGG | - | chr3_2:64118741-64118760 | Msa0417040:intron | 45.0% |
| ! | AACCGACTTATGCTTGGATC+AGG | + | chr3_2:64118767-64118786 | None:intergenic | 45.0% |
| !! | CGGTTAGAATCCTCGCTTTT+AGG | - | chr3_2:64118782-64118801 | Msa0417040:intron | 45.0% |
| ! | TCAGTGCCTTGTTGATGAAG+AGG | - | chr3_2:64119376-64119395 | Msa0417040:CDS | 45.0% |
| TTGCAGTTGCAGCGATGAAC+TGG | + | chr3_2:64115178-64115197 | None:intergenic | 50.0% | |
| !! | GCGGTCTTGTTGTTTCTTGG+TGG | + | chr3_2:64115204-64115223 | None:intergenic | 50.0% |
| AGACCGCACTGTTGTTAAGG+TGG | - | chr3_2:64115217-64115236 | Msa0417040:three_prime_UTR | 50.0% | |
| TCGAATTGCTCTTTCCAGGG+TGG | - | chr3_2:64115274-64115293 | Msa0417040:intron | 50.0% | |
| ACGCTTAAGGAGGCTAAACG+TGG | - | chr3_2:64115329-64115348 | Msa0417040:intron | 50.0% | |
| CGCTTAAGGAGGCTAAACGT+GGG | - | chr3_2:64115330-64115349 | Msa0417040:intron | 50.0% | |
| GCTTAAGGAGGCTAAACGTG+GGG | - | chr3_2:64115331-64115350 | Msa0417040:intron | 50.0% | |
| GCTGAGGTTAGATACAGTGC+CGG | - | chr3_2:64115910-64115929 | Msa0417040:intron | 50.0% | |
| CTGAGGTTAGATACAGTGCC+GGG | - | chr3_2:64115911-64115930 | Msa0417040:intron | 50.0% | |
| ACAGACACAAAAGAGGGGCA+AGG | - | chr3_2:64116006-64116025 | Msa0417040:intron | 50.0% | |
| CAGACACAAAAGAGGGGCAA+GGG | - | chr3_2:64116007-64116026 | Msa0417040:intron | 50.0% | |
| AGACACAAAAGAGGGGCAAG+GGG | - | chr3_2:64116008-64116027 | Msa0417040:intron | 50.0% | |
| CCAGATTACAACAATGCCCC+TGG | + | chr3_2:64116120-64116139 | None:intergenic | 50.0% | |
| !! | CCAGGGGCATTGTTGTAATC+TGG | - | chr3_2:64116117-64116136 | Msa0417040:intron | 50.0% |
| GTAAGTCCTTAAGGGAGGTC+AGG | - | chr3_2:64117590-64117609 | Msa0417040:intron | 50.0% | |
| GACGTGAAGGATGTTGATCG+AGG | - | chr3_2:64117780-64117799 | Msa0417040:intron | 50.0% | |
| ACAGGGAGTTAGCAGCAAAC+TGG | - | chr3_2:64117923-64117942 | Msa0417040:intron | 50.0% | |
| CAGGGAGTTAGCAGCAAACT+GGG | - | chr3_2:64117924-64117943 | Msa0417040:intron | 50.0% | |
| CAAACTGGGATCAAGGTGCA+TGG | - | chr3_2:64117938-64117957 | Msa0417040:intron | 50.0% | |
| ! | GTAACAGGGAATGCTGGCTA+AGG | - | chr3_2:64117969-64117988 | Msa0417040:intron | 50.0% |
| TTGGCCATGCATGCATGTCA+TGG | + | chr3_2:64118168-64118187 | None:intergenic | 50.0% | |
| !! | GGCTTTGTTTGGGAGTTTGG+AGG | - | chr3_2:64118290-64118309 | Msa0417040:intron | 50.0% |
| TTGGAGGGGAAGGAAAGGAA+AGG | - | chr3_2:64118306-64118325 | Msa0417040:intron | 50.0% | |
| AAATGGGAGAGAGGGCTTTG+GGG | + | chr3_2:64118565-64118584 | None:intergenic | 50.0% | |
| GAAAATGGGAGAGAGGGCTT+TGG | + | chr3_2:64118567-64118586 | None:intergenic | 50.0% | |
| AGGGGAAGGCTTGGGAAAAA+AGG | + | chr3_2:64118614-64118633 | None:intergenic | 50.0% | |
| TTTGCGAGTTTGGAGGGGAA+GGG | + | chr3_2:64118637-64118656 | None:intergenic | 50.0% | |
| !! | GGCTTTGTTTGCGAGTTTGG+AGG | + | chr3_2:64118644-64118663 | None:intergenic | 50.0% |
| GGCCTGATCCAAGCATAAGT+CGG | - | chr3_2:64118762-64118781 | Msa0417040:intron | 50.0% | |
| CCTTAACTCTCTTCATCGGG+CGG | - | chr3_2:64119335-64119354 | Msa0417040:CDS | 50.0% | |
| TCCACAGGCTCCACCTTCTT+CGG | + | chr3_2:64115251-64115270 | None:intergenic | 55.0% | |
| ! | TGGTCGCCGATTGCACTCAT+CGG | - | chr3_2:64115294-64115313 | Msa0417040:intron | 55.0% |
| ! | AGGTTAGATACAGTGCCGGG+AGG | - | chr3_2:64115914-64115933 | Msa0417040:intron | 55.0% |
| ! | TAGATACAGTGCCGGGAGGT+TGG | - | chr3_2:64115918-64115937 | Msa0417040:intron | 55.0% |
| AGACAGAGCAGCTTACCTGG+AGG | + | chr3_2:64116684-64116703 | None:intergenic | 55.0% | |
| CAGTTGCCTGACCTCCCTTA+AGG | + | chr3_2:64117599-64117618 | None:intergenic | 55.0% | |
| CCATGCATGCATGTCATGGC+AGG | + | chr3_2:64118164-64118183 | None:intergenic | 55.0% | |
| CCTGCCATGACATGCATGCA+TGG | - | chr3_2:64118161-64118180 | Msa0417040:intron | 55.0% | |
| GTTTGGGAGTTTGGAGGGGA+AGG | - | chr3_2:64118296-64118315 | Msa0417040:intron | 55.0% | |
| GGAGTTTGGAGGGGAAGGAA+AGG | - | chr3_2:64118301-64118320 | Msa0417040:intron | 55.0% | |
| ! | AATGGGAGAGAGGGCTTTGG+GGG | + | chr3_2:64118564-64118583 | None:intergenic | 55.0% |
| GTTTGCGAGTTTGGAGGGGA+AGG | + | chr3_2:64118638-64118657 | None:intergenic | 55.0% | |
| CCGCCCGATGAAGAGAGTTA+AGG | + | chr3_2:64119338-64119357 | None:intergenic | 55.0% | |
| GGTGGAATCGCCACCGAAGA+AGG | - | chr3_2:64115235-64115254 | Msa0417040:three_prime_UTR | 60.0% | |
| GGAATCGCCACCGAAGAAGG+TGG | - | chr3_2:64115238-64115257 | Msa0417040:three_prime_UTR | 60.0% | |
| ACAGGCTCCACCTTCTTCGG+TGG | + | chr3_2:64115248-64115267 | None:intergenic | 60.0% | |
| ACCGAAGAAGGTGGAGCCTG+TGG | - | chr3_2:64115247-64115266 | Msa0417040:three_prime_UTR | 60.0% | |
| ! | TCGCCGATTGCACTCATCGG+TGG | - | chr3_2:64115297-64115316 | Msa0417040:intron | 60.0% |
| ACAAAAGAGGGGCAAGGGGC+AGG | - | chr3_2:64116012-64116031 | Msa0417040:intron | 60.0% | |
| CAAAAGAGGGGCAAGGGGCA+GGG | - | chr3_2:64116013-64116032 | Msa0417040:intron | 60.0% | |
| AAAAGAGGGGCAAGGGGCAG+GGG | - | chr3_2:64116014-64116033 | Msa0417040:intron | 60.0% | |
| CTCCCTCCGCCCTTGCATTT+GGG | - | chr3_2:64116063-64116082 | Msa0417040:intron | 60.0% | |
| TCCCTCCGCCCTTGCATTTG+GGG | - | chr3_2:64116064-64116083 | Msa0417040:intron | 60.0% | |
| AGACCCACAGCTGCACTTGC+AGG | - | chr3_2:64116491-64116510 | Msa0417040:intron | 60.0% | |
| CAGCCTGCAAGTGCAGCTGT+GGG | + | chr3_2:64116497-64116516 | None:intergenic | 60.0% | |
| !! | GCTGGGCGCTGCACCTATTT+TGG | - | chr3_2:64117450-64117469 | Msa0417040:intron | 60.0% |
| GAGGTCAGGCAACTGAGCGT+TGG | - | chr3_2:64117604-64117623 | Msa0417040:intron | 60.0% | |
| !! | ATGGGAGAGAGGGCTTTGGG+GGG | + | chr3_2:64118563-64118582 | None:intergenic | 60.0% |
| GAGTTTGGAGGGGAAGGGAG+GGG | + | chr3_2:64118632-64118651 | None:intergenic | 60.0% | |
| CGAGTTTGGAGGGGAAGGGA+GGG | + | chr3_2:64118633-64118652 | None:intergenic | 60.0% | |
| AGTGCAATCGGCGACCACCC+TGG | + | chr3_2:64115291-64115310 | None:intergenic | 65.0% | |
| GCTCCCTCCGCCCTTGCATT+TGG | - | chr3_2:64116062-64116081 | Msa0417040:intron | 65.0% | |
| CCCCCAAATGCAAGGGCGGA+GGG | + | chr3_2:64116068-64116087 | None:intergenic | 65.0% | |
| CCCTCCGCCCTTGCATTTGG+GGG | - | chr3_2:64116065-64116084 | Msa0417040:intron | 65.0% | |
| ACCCCCAAATGCAAGGGCGG+AGG | + | chr3_2:64116069-64116088 | None:intergenic | 65.0% | |
| CGCACCCCCAAATGCAAGGG+CGG | + | chr3_2:64116072-64116091 | None:intergenic | 65.0% | |
| CGCCCTTGCATTTGGGGGTG+CGG | - | chr3_2:64116070-64116089 | Msa0417040:intron | 65.0% | |
| ! | GCCCTTGCATTTGGGGGTGC+GGG | - | chr3_2:64116071-64116090 | Msa0417040:intron | 65.0% |
| CCCCGCACCCCCAAATGCAA+GGG | + | chr3_2:64116075-64116094 | None:intergenic | 65.0% | |
| ! | CCCTTGCATTTGGGGGTGCG+GGG | - | chr3_2:64116072-64116091 | Msa0417040:intron | 65.0% |
| ! | CCTTGCATTTGGGGGTGCGG+GGG | - | chr3_2:64116073-64116092 | Msa0417040:intron | 65.0% |
| GCAGCCTGCAAGTGCAGCTG+TGG | + | chr3_2:64116498-64116517 | None:intergenic | 65.0% | |
| GGGAAGGGAGGGGAAGGCTT+GGG | + | chr3_2:64118622-64118641 | None:intergenic | 65.0% | |
| TTGGAGGGGAAGGGAGGGGA+AGG | + | chr3_2:64118628-64118647 | None:intergenic | 65.0% | |
| GCGAGTTTGGAGGGGAAGGG+AGG | + | chr3_2:64118634-64118653 | None:intergenic | 65.0% | |
| CCCCCGCACCCCCAAATGCA+AGG | + | chr3_2:64116076-64116095 | None:intergenic | 70.0% | |
| GGGCGATAGCCCCCACGGTA+CGG | - | chr3_2:64116093-64116112 | Msa0417040:intron | 70.0% | |
| GGCGATAGCCCCCACGGTAC+GGG | - | chr3_2:64116094-64116113 | Msa0417040:intron | 70.0% | |
| ATGCCCCTGGCCCGTACCGT+GGG | + | chr3_2:64116107-64116126 | None:intergenic | 70.0% | |
| AATGCCCCTGGCCCGTACCG+TGG | + | chr3_2:64116108-64116127 | None:intergenic | 70.0% | |
| GGGGAAGGGAGGGGAAGGCT+TGG | + | chr3_2:64118623-64118642 | None:intergenic | 70.0% | |
| TGCGGGGGCGATAGCCCCCA+CGG | - | chr3_2:64116088-64116107 | Msa0417040:intron | 75.0% | |
| TAGCCCCCACGGTACGGGCC+AGG | - | chr3_2:64116099-64116118 | Msa0417040:intron | 75.0% | |
| AGCCCCCACGGTACGGGCCA+GGG | - | chr3_2:64116100-64116119 | Msa0417040:intron | 75.0% | |
| TGCCCCTGGCCCGTACCGTG+GGG | + | chr3_2:64116106-64116125 | None:intergenic | 75.0% | |
| ! | GCCCCCACGGTACGGGCCAG+GGG | - | chr3_2:64116101-64116120 | Msa0417040:intron | 80.0% |
| ! | GCCCCTGGCCCGTACCGTGG+GGG | + | chr3_2:64116105-64116124 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 64114879 | 64119598 | 64114879 | ID=Msa0417040;Name=Msa0417040 |
| chr3_2 | mRNA | 64114879 | 64119598 | 64114879 | ID=Msa0417040-mRNA-1;Parent=Msa0417040;Name=Msa0417040-mRNA-1;_AED=0.03;_eAED=0.03;_QI=195|1|1|1|0.66|0.5|4|403|158 |
| chr3_2 | exon | 64114879 | 64115266 | 64114879 | ID=Msa0417040-mRNA-1:exon:14127;Parent=Msa0417040-mRNA-1 |
| chr3_2 | exon | 64117636 | 64117706 | 64117636 | ID=Msa0417040-mRNA-1:exon:14126;Parent=Msa0417040-mRNA-1 |
| chr3_2 | exon | 64117790 | 64117859 | 64117790 | ID=Msa0417040-mRNA-1:exon:14125;Parent=Msa0417040-mRNA-1 |
| chr3_2 | exon | 64119053 | 64119598 | 64119053 | ID=Msa0417040-mRNA-1:exon:14124;Parent=Msa0417040-mRNA-1 |
| chr3_2 | five_prime_UTR | 64119404 | 64119598 | 64119404 | ID=Msa0417040-mRNA-1:five_prime_utr;Parent=Msa0417040-mRNA-1 |
| chr3_2 | CDS | 64119053 | 64119403 | 64119053 | ID=Msa0417040-mRNA-1:cds;Parent=Msa0417040-mRNA-1 |
| chr3_2 | CDS | 64117790 | 64117859 | 64117790 | ID=Msa0417040-mRNA-1:cds;Parent=Msa0417040-mRNA-1 |
| chr3_2 | CDS | 64117651 | 64117706 | 64117651 | ID=Msa0417040-mRNA-1:cds;Parent=Msa0417040-mRNA-1 |
| chr3_2 | three_prime_UTR | 64117636 | 64117650 | 64117636 | ID=Msa0417040-mRNA-1:three_prime_utr;Parent=Msa0417040-mRNA-1 |
| chr3_2 | three_prime_UTR | 64114879 | 64115266 | 64114879 | ID=Msa0417040-mRNA-1:three_prime_utr;Parent=Msa0417040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
