AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0421780

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0421780 MtrunA17_Chr3g0122431 99.296 284 2 0 1 284 86 369 0.0 586
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0421780 AT1G67325.1 70.588 289 78 4 1 284 1 287 6.23e-140 398
Msa0421780 AT1G67325.2 70.345 290 78 5 1 284 1 288 4.74e-138 394

Find 243 sgRNAs with CRISPR-Local

Find 414 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGAAACTTCAATTGTTTA+TGG 0.130184 3_2:+70801308 None:intergenic
TCAGGGATTGCATTCATATT+TGG 0.138494 3_2:+70800155 None:intergenic
CCCTATGAGGTTCCATTTAC+TGG 0.167642 3_2:-70803511 Msa0421780:CDS
TCAGGGATTCTATACATATT+TGG 0.168181 3_2:+70800738 None:intergenic
GCAATGTCAATTTCTCTTTC+AGG 0.172921 3_2:-70804260 Msa0421780:CDS
AAATTGACGTTACCACATTT+TGG 0.177028 3_2:+70802381 None:intergenic
TCTCTTAAAATAAATTATTT+AGG 0.192159 3_2:+70800636 None:intergenic
CAGGGATTCTATACATATTT+GGG 0.211681 3_2:+70800739 None:intergenic
TATATTGGTGCCCCACCTTA+TGG 0.213371 3_2:-70803562 Msa0421780:CDS
CACATTGTCTTGTATATCTT+TGG 0.217293 3_2:-70800505 Msa0421780:three_prime_UTR
GATTAGCACTCCCGGTATTC+AGG 0.237229 3_2:+70800720 None:intergenic
CTCTTATGCTTCCTGTCATT+TGG 0.241291 3_2:-70801738 Msa0421780:CDS
GCATACCTGGGATCCGGGTT+TGG 0.243357 3_2:+70802317 None:intergenic
CAGGGATTGCATTCATATTT+GGG 0.249475 3_2:+70800156 None:intergenic
ACTTTGGTGCCTTTGGTCTT+TGG 0.254708 3_2:-70800690 Msa0421780:three_prime_UTR
CGATGACAAGTCTCAGAAAA+AGG 0.257099 3_2:-70802532 Msa0421780:CDS
AATAATTAATGATGTCAAAT+AGG 0.268957 3_2:-70800842 Msa0421780:three_prime_UTR
TGTGATGATACAAGTAATTC+AGG 0.270284 3_2:+70800137 None:intergenic
GTGAACACCTTATGAATAAA+AGG 0.283154 3_2:+70800017 None:intergenic
TCATTGGCACTTGGTGCTTT+TGG 0.285846 3_2:+70800392 None:intergenic
GAAATTGACATTGCCGCAAC+TGG 0.289903 3_2:+70804269 None:intergenic
TATTAACTGAGATGGTATTT+TGG 0.292017 3_2:-70801470 Msa0421780:three_prime_UTR
AATCTTTGTGAGTGCTTTGT+TGG 0.292454 3_2:-70800980 Msa0421780:three_prime_UTR
AATCTTTGTGAGTGCTTTGT+TGG 0.292454 3_2:-70801021 Msa0421780:three_prime_UTR
GGTGGAGAGAGAAGAGAGAT+AGG 0.307163 3_2:+70800657 None:intergenic
TCTTCCAGCATTGCTCAGTT+TGG 0.312615 3_2:-70801577 Msa0421780:three_prime_UTR
GTCCAGCCATTTCTCGTCAT+TGG 0.313193 3_2:+70799875 None:intergenic
TAGGCTGATCCTCCAGTAAA+TGG 0.316077 3_2:+70803499 None:intergenic
CACATTGTCTTGTATACCTT+TGG 0.316373 3_2:+70800571 None:intergenic
CAGCGTTGTAAAAGAGGCTT+TGG 0.319360 3_2:+70799634 None:intergenic
GTGCTTTGTTGGGTCCATAC+TGG 0.320851 3_2:-70801010 Msa0421780:three_prime_UTR
GGATTTCACTTTGGTGCCTT+TGG 0.324797 3_2:-70800697 Msa0421780:three_prime_UTR
CTTCCAGCATTGCTCAGTTT+GGG 0.326844 3_2:-70801576 Msa0421780:three_prime_UTR
ATATGCCATGCCCCAGCTAT+TGG 0.331863 3_2:-70803111 Msa0421780:CDS
TCCAGCCATTTCTCGTCATT+GGG 0.333409 3_2:+70799876 None:intergenic
ATATTGGTGCCCCACCTTAT+GGG 0.333502 3_2:-70803561 Msa0421780:CDS
TTGTTGCACTTTGGTCTTGA+AGG 0.335707 3_2:-70799901 Msa0421780:three_prime_UTR
CCTTATGGGTCTTTATTCAA+TGG 0.342244 3_2:-70803547 Msa0421780:CDS
TGCCTTTGCAGGTTGATAAC+AGG 0.342807 3_2:-70804768 Msa0421780:intron
TATGGCCTCGGTGTCCCTAT+TGG 0.344398 3_2:-70803083 Msa0421780:CDS
CATACCTGGGATCCGGGTTT+GGG 0.368855 3_2:+70802318 None:intergenic
TCTGTCTGTTGCACTTGGTT+CGG 0.369594 3_2:+70801983 None:intergenic
CATTCATATTTGGGGACTAC+AGG 0.372955 3_2:+70800165 None:intergenic
ATGCAACTCGTGACAATGAT+TGG 0.373547 3_2:-70802410 Msa0421780:CDS
GGGGCGTTGGAGCCTAAATA+AGG 0.374623 3_2:+70803595 None:intergenic
TTTATTGTTGCAACAGAGAT+TGG 0.375131 3_2:-70801854 Msa0421780:CDS
ATATTTCACTTGGGTGTCAT+TGG 0.375214 3_2:+70800376 None:intergenic
TCTGGCATAAAGATTGTTGC+AGG 0.380709 3_2:-70801407 Msa0421780:three_prime_UTR
AAAGATTAGCCCGCCCAGTA+TGG 0.383695 3_2:+70800996 None:intergenic
CTTCCGCTGCCAAGCGTGCC+AGG 0.384768 3_2:-70804741 Msa0421780:CDS
GTTATTTGAACATCCACTTT+GGG 0.384950 3_2:+70800466 None:intergenic
ATTATTATATTAGACAAATC+AGG 0.385571 3_2:+70799716 None:intergenic
GGTGCAGTTACGCATATTGC+AGG 0.385655 3_2:+70804233 None:intergenic
ACCAAAAGGAAACTTAAAAC+TGG 0.389800 3_2:+70801382 None:intergenic
ATAAGGAGCTGCGGATGAAT+AGG 0.393530 3_2:+70803612 None:intergenic
TCATCCGCAGCTCCTTATTT+AGG 0.393685 3_2:-70803607 Msa0421780:CDS
ACCATTGCTCCAGGTCCAAT+AGG 0.396253 3_2:+70803068 None:intergenic
TACATATTTGGGGCCTATAC+AGG 0.398538 3_2:+70800750 None:intergenic
TCCAGTAAATGGAACCTCAT+AGG 0.398572 3_2:+70803510 None:intergenic
ATCTTTGTGAGTGCTTTGTT+GGG 0.402925 3_2:-70800979 Msa0421780:three_prime_UTR
ATCTTTGTGAGTGCTTTGTT+GGG 0.402925 3_2:-70801020 Msa0421780:three_prime_UTR
GCTAGATGTAATGGTCTATA+CGG 0.404926 3_2:+70803439 None:intergenic
ACACAATGGGAAACAGAATA+TGG 0.407375 3_2:+70800914 None:intergenic
GGCCATAGCGATCCAATAGC+TGG 0.408792 3_2:+70803099 None:intergenic
GGAGAGTTAAAATGCACTCT+TGG 0.418979 3_2:-70800797 Msa0421780:three_prime_UTR
ATAATCAAATAATGCTTCTC+AGG 0.421215 3_2:+70800103 None:intergenic
TACTTGCACTTTACCTGTAT+AGG 0.423645 3_2:-70800763 Msa0421780:three_prime_UTR
GAATTATGATCAGCAGGCCT+TGG 0.428440 3_2:+70804207 None:intergenic
CCTTAGCAGGGCACTAGGCC+AGG 0.428460 3_2:-70802564 Msa0421780:intron
ATCTCCAGATCAAAATGAAC+AGG 0.432251 3_2:-70801914 Msa0421780:CDS
ACATAGATTAGCACTCAGTA+TGG 0.435641 3_2:+70800955 None:intergenic
CCAGTAAATGGAACCTCATA+GGG 0.438911 3_2:+70803511 None:intergenic
ATCCACTTTGGGACAACTTG+TGG 0.446314 3_2:+70800477 None:intergenic
TTATCCCATACCATTGCTCC+AGG 0.446633 3_2:+70803059 None:intergenic
TGCTTTGTTGGGTCCATACT+GGG 0.446821 3_2:-70801009 Msa0421780:three_prime_UTR
TGTTATTTGAACATCCACTT+TGG 0.447233 3_2:+70800465 None:intergenic
CTCGGTGTCCCTATTGGACC+TGG 0.447427 3_2:-70803077 Msa0421780:CDS
TCGATTAATAAATCAATTCA+AGG 0.450386 3_2:-70800054 Msa0421780:three_prime_UTR
TATGATCAGCAGGCCTTGGT+TGG 0.450863 3_2:+70804211 None:intergenic
ACACCCAAACTGAGCAATGC+TGG 0.457221 3_2:+70801573 None:intergenic
CTGTTGCACTTGGTTCGGAA+TGG 0.457553 3_2:+70801988 None:intergenic
TCCACTTTGGGACAACTTGT+GGG 0.458577 3_2:+70800478 None:intergenic
ACAATTCTGTCTGTTGCACT+TGG 0.460673 3_2:+70801978 None:intergenic
CCCGCTCGAGAAGTAGTAGA+AGG 0.460836 3_2:-70805146 Msa0421780:five_prime_UTR
AGGTCCCCAATGACGAGAAA+TGG 0.460959 3_2:-70799881 Msa0421780:three_prime_UTR
CCCATTGTGTCGCTGACATA+CGG 0.463003 3_2:-70800901 Msa0421780:three_prime_UTR
ATGTGGGTGATGAGATCATT+GGG 0.463319 3_2:+70799838 None:intergenic
AAGGCAGCATACCTGGGATC+CGG 0.463801 3_2:+70802311 None:intergenic
TGAATACCGGGAGTGCTAAT+CGG 0.466600 3_2:-70800718 Msa0421780:three_prime_UTR
CTATTGGATCGCTATGGCCT+CGG 0.466850 3_2:-70803095 Msa0421780:CDS
AGCAGTGACTCGAAAGTAAA+CGG 0.468841 3_2:+70801184 None:intergenic
GCTCCACTGGTGTATGGTGC+TGG 0.469100 3_2:+70803412 None:intergenic
CCATTGCTCCAGGTCCAATA+GGG 0.469970 3_2:+70803069 None:intergenic
TCAGCCTATCAGTACAGTTA+TGG 0.471174 3_2:-70803484 Msa0421780:CDS
CCTCATATTGTATGCTTCAA+AGG 0.474076 3_2:+70799672 None:intergenic
GCTGGTCCTGCTAGATGTAA+TGG 0.476031 3_2:+70803430 None:intergenic
TGTATAGAATCCCTGAATAC+CGG 0.479233 3_2:-70800731 Msa0421780:three_prime_UTR
TTTCAGATTAGAGAGAATGA+TGG 0.480424 3_2:+70800419 None:intergenic
TGAAGGTTAGCAAATTGAAA+AGG 0.481784 3_2:+70801877 None:intergenic
ACTTGGGTGTCATTGGCACT+TGG 0.483585 3_2:+70800383 None:intergenic
TGTTGCACTTGGTTCGGAAT+GGG 0.484091 3_2:+70801989 None:intergenic
GAGAGTTAAAATGCACTCTT+GGG 0.485117 3_2:-70800796 Msa0421780:three_prime_UTR
GTGTCCAACCACGGCTCCAC+TGG 0.485675 3_2:+70803399 None:intergenic
AGAAGTCACTTGTTGCACTT+TGG 0.486330 3_2:-70799910 Msa0421780:three_prime_UTR
AAAAGATGCCGGAGGGAAGC+TGG 0.486610 3_2:-70802041 Msa0421780:CDS
AGGCTATGCCGATTGTAGTC+AGG 0.489272 3_2:+70799736 None:intergenic
ATTAGCACTCCCGGTATTCA+GGG 0.489411 3_2:+70800721 None:intergenic
GCTTCCATAACTGTACTGAT+AGG 0.490302 3_2:+70803480 None:intergenic
AAATTAGCACATATTTCACT+TGG 0.490788 3_2:+70800366 None:intergenic
AGTGTTCTTATCAGACTTTG+AGG 0.491350 3_2:+70802171 None:intergenic
ATTTGTTGTATTAACTGAGA+TGG 0.495787 3_2:-70801478 Msa0421780:three_prime_UTR
ACCACGGCTCCACTGGTGTA+TGG 0.498513 3_2:+70803406 None:intergenic
GCATCAAGCCTGACTACAAT+CGG 0.501345 3_2:-70799744 Msa0421780:three_prime_UTR
AAATAATGCTTCTCAGGAGA+AGG 0.502308 3_2:+70800109 None:intergenic
GTAGCCGCAGGGAAGATGAT+TGG 0.502761 3_2:-70804299 Msa0421780:CDS
TGCAACTCGTGACAATGATT+GGG 0.502973 3_2:-70802409 Msa0421780:CDS
AGTCCTGGCACGCTTGGCAG+CGG 0.503501 3_2:+70804738 None:intergenic
CCTTGCCTTAGCAGGGCACT+AGG 0.504169 3_2:-70802569 Msa0421780:intron
ATGATCAGCAGGCCTTGGTT+GGG 0.505822 3_2:+70804212 None:intergenic
ATCAAGCAGCGTTGTAAAAG+AGG 0.506512 3_2:+70799628 None:intergenic
ACTGCTCACCGTCATGTCTC+AGG 0.507462 3_2:-70805073 Msa0421780:intron
TCACACTTCCAGCTTCCCTC+CGG 0.511245 3_2:+70802033 None:intergenic
CTTAAAATAAATTATTTAGG+TGG 0.511278 3_2:+70800639 None:intergenic
TTGTTGGGTCCATACTGGGC+GGG 0.511402 3_2:-70801005 Msa0421780:three_prime_UTR
ACCATCAGTCCTGGCACGCT+TGG 0.511589 3_2:+70804732 None:intergenic
GAAGCCTCTTCAAGCTCCAC+AGG 0.514671 3_2:-70803635 Msa0421780:CDS
TAATAATTCTTCGCTTACAT+TGG 0.515160 3_2:-70800542 Msa0421780:three_prime_UTR
AGCACCCAGCTGATGATACT+AGG 0.515926 3_2:-70801058 Msa0421780:three_prime_UTR
AACTCCTTTAATGCAAAATG+TGG 0.516625 3_2:+70799821 None:intergenic
AGTTGTACTTAAAATGCAAA+AGG 0.516641 3_2:+70801346 None:intergenic
CCTTTGAAGCATACAATATG+AGG 0.516739 3_2:-70799672 Msa0421780:three_prime_UTR
CACACCCAAACCCGGATCCC+AGG 0.518215 3_2:-70802322 Msa0421780:intron
TATGGAAGCCGTGTTCCTGC+TGG 0.519467 3_2:-70803466 Msa0421780:CDS
CTTACAGAATTATGATCAGC+AGG 0.520212 3_2:+70804201 None:intergenic
CCGTATGTCAGCGACACAAT+GGG 0.520822 3_2:+70800901 None:intergenic
GGGGCACCAATATAAATTGA+AGG 0.521368 3_2:+70803571 None:intergenic
CACCAATATAAATTGAAGGG+GGG 0.525042 3_2:+70803575 None:intergenic
AAACATGTCTTAGTACTCAC+TGG 0.526208 3_2:+70801624 None:intergenic
GCACCAATATAAATTGAAGG+GGG 0.526551 3_2:+70803574 None:intergenic
CGATTAATAAATCAATTCAA+GGG 0.526714 3_2:-70800053 Msa0421780:three_prime_UTR
CCCTATTGGACCTGGAGCAA+TGG 0.527038 3_2:-70803069 Msa0421780:intron
TCTGTTGCAACAATAAATGA+AGG 0.531007 3_2:+70801860 None:intergenic
GTGATGATACAAGTAATTCA+GGG 0.531313 3_2:+70800138 None:intergenic
AACAAAAGAATCCAAATGAC+AGG 0.531789 3_2:+70801727 None:intergenic
ATTCATATTTGGGGACTACA+GGG 0.532526 3_2:+70800166 None:intergenic
GTGCTAATCGGATTTCACTT+TGG 0.532546 3_2:-70800706 Msa0421780:three_prime_UTR
ACTAATGATATCATGAAGGC+TGG 0.534368 3_2:-70800247 Msa0421780:three_prime_UTR
GCCAAGCGTGCCAGGACTGA+TGG 0.535235 3_2:-70804733 Msa0421780:intron
GAGTACTAAGACATGTTTGA+GGG 0.535687 3_2:-70801619 Msa0421780:three_prime_UTR
GTAAACGGTTTCTGTGATGC+TGG 0.537957 3_2:+70801199 None:intergenic
GCCATAGCGATCCAATAGCT+GGG 0.538615 3_2:+70803100 None:intergenic
TGGTAACGCACCATCAGTCC+TGG 0.539140 3_2:+70804723 None:intergenic
TAATGTCAGTGGTGCGCAGT+AGG 0.540797 3_2:+70800318 None:intergenic
CGTCAGCCGTGTCAATTACA+TGG 0.541836 3_2:-70800818 Msa0421780:three_prime_UTR
AATGTGGGTGATGAGATCAT+TGG 0.543408 3_2:+70799837 None:intergenic
AGGCAGCATACCTGGGATCC+GGG 0.543582 3_2:+70802312 None:intergenic
TGCTGACAAGCCAGCTGAGT+CGG 0.544079 3_2:-70801953 Msa0421780:CDS
GGCACCAATATAAATTGAAG+GGG 0.544339 3_2:+70803573 None:intergenic
CCTTCTACTACTTCTCGAGC+GGG 0.546466 3_2:+70805146 None:intergenic
TACACCAGTGGAGCCGTGGT+TGG 0.547754 3_2:-70803403 Msa0421780:CDS
GACATGTTTGAGGGTTGAGA+AGG 0.548962 3_2:-70801610 Msa0421780:three_prime_UTR
AAGGTTCTACAGAAGTTGCA+TGG 0.549750 3_2:+70799691 None:intergenic
TGAAATCCGATTAGCACTCC+CGG 0.550185 3_2:+70800712 None:intergenic
CCCCAATGACGAGAAATGGC+TGG 0.550326 3_2:-70799877 Msa0421780:three_prime_UTR
AGCGTTGTAAAAGAGGCTTT+GGG 0.552565 3_2:+70799635 None:intergenic
GGTCTATACGGACTGCCAGC+AGG 0.556407 3_2:+70803451 None:intergenic
TGAATAAAGACCCATAAGGT+GGG 0.565119 3_2:+70803551 None:intergenic
GTGAGCAGTGAGTGCTGCGA+GGG 0.566332 3_2:+70805087 None:intergenic
CCAATCAGAGCAAAAGATGC+CGG 0.573203 3_2:-70802052 Msa0421780:intron
TATAGACCATTACATCTAGC+AGG 0.573249 3_2:-70803436 Msa0421780:CDS
AACTCTCCATGTAATTGACA+CGG 0.577372 3_2:+70800812 None:intergenic
CCCCAGCTATTGGATCGCTA+TGG 0.578680 3_2:-70803101 Msa0421780:CDS
ACCAATATAAATTGAAGGGG+GGG 0.578819 3_2:+70803576 None:intergenic
TCCTTCTACTACTTCTCGAG+CGG 0.579714 3_2:+70805145 None:intergenic
AATTAGCACATATTTCACTT+GGG 0.580031 3_2:+70800367 None:intergenic
AATAATGCTTCTCAGGAGAA+GGG 0.582176 3_2:+70800110 None:intergenic
TTGAATAAAGACCCATAAGG+TGG 0.582236 3_2:+70803550 None:intergenic
GGGAATTACCTGAGACATGA+CGG 0.584892 3_2:+70805065 None:intergenic
TCCCACAAGTTGTCCCAAAG+TGG 0.587065 3_2:-70800479 Msa0421780:three_prime_UTR
TTGCACATTAAATATAGCAA+TGG 0.587511 3_2:+70801659 None:intergenic
GTATAGAATCCCTGAATACC+GGG 0.591508 3_2:-70800730 Msa0421780:three_prime_UTR
ACAACTTATGGGACAACCAA+AGG 0.595636 3_2:-70800587 Msa0421780:three_prime_UTR
GCCGTATGTCAGCGACACAA+TGG 0.595821 3_2:+70800900 None:intergenic
AGGTACAAAGGAAATAAACT+AGG 0.596332 3_2:+70801684 None:intergenic
GCGATCCAATAGCTGGGGCA+TGG 0.596562 3_2:+70803106 None:intergenic
GCAGACAGTTCAGAACCAAA+AGG 0.598611 3_2:+70801368 None:intergenic
AAATGCAACACACCCAAACC+CGG 0.600952 3_2:-70802330 Msa0421780:CDS
AATAACTAATGATATCATGA+AGG 0.601885 3_2:-70800251 Msa0421780:three_prime_UTR
TGACAACTTCTGCAACATAG+AGG 0.601965 3_2:+70801530 None:intergenic
GATTGGACATGTCCCAGTTG+CGG 0.602850 3_2:-70804282 Msa0421780:CDS
AGGGATTGCATTCATATTTG+GGG 0.605289 3_2:+70800157 None:intergenic
CATGTAATTGACACGGCTGA+CGG 0.608977 3_2:+70800819 None:intergenic
CATTAAATATAGCAATGGAT+AGG 0.608999 3_2:+70801664 None:intergenic
CCAGCCATTTCTCGTCATTG+GGG 0.609743 3_2:+70799877 None:intergenic
AAAACCTAGTATCATCAGCT+GGG 0.611109 3_2:+70801054 None:intergenic
GCATACATGCTAAAAGTGGT+AGG 0.611149 3_2:+70801223 None:intergenic
AGGGATTCTATACATATTTG+GGG 0.611454 3_2:+70800740 None:intergenic
GCAATGCTGGAAGACAACTC+TGG 0.612472 3_2:+70801586 None:intergenic
TAGGCCTGTGGAGCTTGAAG+AGG 0.613687 3_2:+70803631 None:intergenic
ACCATACACCAGTGGAGCCG+TGG 0.614260 3_2:-70803407 Msa0421780:CDS
ACAAAGACACCAAAGACCAA+AGG 0.614639 3_2:+70800681 None:intergenic
TTCATATTTGGGGACTACAG+GGG 0.616748 3_2:+70800167 None:intergenic
TGACACATATTATGAGAAGG+TGG 0.618244 3_2:+70801501 None:intergenic
CCATTGAATAAAGACCCATA+AGG 0.619596 3_2:+70803547 None:intergenic
AAATTGACATTGCCGCAACT+GGG 0.619691 3_2:+70804270 None:intergenic
ATAGCAATGGATAGGTACAA+AGG 0.623067 3_2:+70801672 None:intergenic
TTTGTTGGGTCCATACTGGG+CGG 0.624051 3_2:-70801006 Msa0421780:three_prime_UTR
TATGAGGTTCCATTTACTGG+AGG 0.626370 3_2:-70803508 Msa0421780:CDS
GGGCACCAATATAAATTGAA+GGG 0.630466 3_2:+70803572 None:intergenic
GATTAATAAATCAATTCAAG+GGG 0.631670 3_2:-70800052 Msa0421780:three_prime_UTR
AGTGGAGCCGTGGTTGGACA+CGG 0.632225 3_2:-70803397 Msa0421780:intron
GAACATACCGTGTCCAACCA+CGG 0.632372 3_2:+70803390 None:intergenic
GACACATATTATGAGAAGGT+GGG 0.633114 3_2:+70801502 None:intergenic
GAATAAAGACCCATAAGGTG+GGG 0.636716 3_2:+70803552 None:intergenic
TGGCGCATACATGCTAAAAG+TGG 0.637624 3_2:+70801219 None:intergenic
TGAGTACTAAGACATGTTTG+AGG 0.639687 3_2:-70801620 Msa0421780:three_prime_UTR
TGCGTAACTGCACCCAACCA+AGG 0.643014 3_2:-70804224 Msa0421780:CDS
AATTGACACATATTATGAGA+AGG 0.643568 3_2:+70801498 None:intergenic
TTGAAAAGAAATGAAGAACT+CGG 0.646566 3_2:-70799946 Msa0421780:three_prime_UTR
CAGTAAATGGAACCTCATAG+GGG 0.648620 3_2:+70803512 None:intergenic
TTGACTCATGTAATTGACAC+AGG 0.652301 3_2:+70800222 None:intergenic
CTACTACTTCTCGAGCGGGG+CGG 0.658678 3_2:+70805150 None:intergenic
TCAGAGCAAAAGATGCCGGA+GGG 0.658717 3_2:-70802048 Msa0421780:intron
ATCAGAGCAAAAGATGCCGG+AGG 0.659983 3_2:-70802049 Msa0421780:intron
AGTAAATGGAACCTCATAGG+GGG 0.661420 3_2:+70803513 None:intergenic
CCATAGCGATCCAATAGCTG+GGG 0.661975 3_2:+70803101 None:intergenic
GGAGCCTAAATAAGGAGCTG+CGG 0.664165 3_2:+70803603 None:intergenic
CAAAGGTATACAAGACAATG+TGG 0.665722 3_2:-70800570 Msa0421780:three_prime_UTR
TTTGTTTGTAGGTAGCCGCA+GGG 0.666364 3_2:-70804310 Msa0421780:intron
ACGGACTGCCAGCAGGAACA+CGG 0.673399 3_2:+70803458 None:intergenic
ACTCCTTTAATGCAAAATGT+GGG 0.675383 3_2:+70799822 None:intergenic
AAGTGCAACAGACAGAATTG+TGG 0.680252 3_2:-70801976 Msa0421780:CDS
GCTGCGGATGAATAGGCCTG+TGG 0.686536 3_2:+70803619 None:intergenic
GTAAATGGAACCTCATAGGG+GGG 0.695701 3_2:+70803514 None:intergenic
CTTCTACTACTTCTCGAGCG+GGG 0.700067 3_2:+70805147 None:intergenic
GGACCAGCACCATACACCAG+TGG 0.704235 3_2:-70803415 Msa0421780:CDS
GATTGGGCTTGTCCAAAATG+TGG 0.706309 3_2:-70802393 Msa0421780:CDS
ATGTCCAATCATCTTCCCTG+CGG 0.718395 3_2:+70804295 None:intergenic
GGTGAGCAGTGAGTGCTGCG+AGG 0.733204 3_2:+70805086 None:intergenic
TAGTTGAATCGTAATGTCAG+TGG 0.738018 3_2:+70800307 None:intergenic
CAGGTCCAATAGGGACACCG+AGG 0.741060 3_2:+70803078 None:intergenic
AAAAGAAATGAAGAACTCGG+CGG 0.753436 3_2:-70799943 Msa0421780:three_prime_UTR
TGTGGGTGATGAGATCATTG+GGG 0.778556 3_2:+70799839 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAACATAATTAAAAATAG+AGG + chr3_2:70800780-70800799 None:intergenic 10.0%
!! TCTCTTAAAATAAATTATTT+AGG + chr3_2:70804189-70804208 None:intergenic 10.0%
!! AAGTTTATATTGTAAAAATT+TGG - chr3_2:70804540-70804559 Msa0421780:intron 10.0%
!!! TTAAATTTGTTTTTGTTTGT+AGG - chr3_2:70800501-70800520 Msa0421780:three_prime_UTR 15.0%
!! AACATTGAATATAAACATAT+TGG + chr3_2:70800654-70800673 None:intergenic 15.0%
!!! GTTTTTTTTGTGATATATAA+AGG - chr3_2:70800694-70800713 Msa0421780:three_prime_UTR 15.0%
!! ATAAGAATATAAAACAATAG+AGG - chr3_2:70800940-70800959 Msa0421780:three_prime_UTR 15.0%
!! GAAAAAAAAAGTAAGTTTAA+AGG + chr3_2:70801125-70801144 None:intergenic 15.0%
!!! TAATTTTTTCTGATTAATGA+AGG - chr3_2:70801559-70801578 Msa0421780:three_prime_UTR 15.0%
!! AAATTTAACATAACTGTAAT+AGG + chr3_2:70801662-70801681 None:intergenic 15.0%
!!! AGTTATGTTAAATTTTTTGT+TGG - chr3_2:70801667-70801686 Msa0421780:three_prime_UTR 15.0%
!!! GATATTTTTTCTTGTTTTAT+TGG - chr3_2:70801947-70801966 Msa0421780:CDS 15.0%
!! AAGAAAGTTTAGTTAAAAAT+TGG - chr3_2:70803949-70803968 Msa0421780:intron 15.0%
!! AATAATTAATGATGTCAAAT+AGG - chr3_2:70803980-70803999 Msa0421780:intron 15.0%
!! CTTAAAATAAATTATTTAGG+TGG + chr3_2:70804186-70804205 None:intergenic 15.0%
!!! TTCAAATTTTATTCATCAAT+AGG - chr3_2:70805022-70805041 Msa0421780:intron 15.0%
!! ATTATTATATTAGACAAATC+AGG + chr3_2:70805109-70805128 None:intergenic 15.0%
!!! TAAGATTCCAATTTTTTCAT+CGG + chr3_2:70800023-70800042 None:intergenic 20.0%
!! ATAAGATTCCTTAAAACAAA+TGG + chr3_2:70800122-70800141 None:intergenic 20.0%
!! AAAAACAAATTTAAATGCAC+CGG + chr3_2:70800495-70800514 None:intergenic 20.0%
!! ATTTAATGTGTCAATCAATT+GGG + chr3_2:70800858-70800877 None:intergenic 20.0%
!! AATTTAATGTGTCAATCAAT+TGG + chr3_2:70800859-70800878 None:intergenic 20.0%
!! ATTGATTGACACATTAAATT+AGG - chr3_2:70800859-70800878 Msa0421780:three_prime_UTR 20.0%
!! TTGATTGACACATTAAATTA+GGG - chr3_2:70800860-70800879 Msa0421780:three_prime_UTR 20.0%
!! TTAATGAAGGAAAATATTCA+AGG - chr3_2:70801572-70801591 Msa0421780:three_prime_UTR 20.0%
!! AATAGGATTATATCTACAAA+AGG + chr3_2:70801645-70801664 None:intergenic 20.0%
!!! ATTTTTTGTTGGTGATTATT+TGG - chr3_2:70801678-70801697 Msa0421780:three_prime_UTR 20.0%
!!! GATTATTTAAAACTTTTGTC+AGG - chr3_2:70801798-70801817 Msa0421780:CDS 20.0%
!!! CAGCATTTTTTTAAAAACAA+TGG + chr3_2:70802000-70802019 None:intergenic 20.0%
!! TTTAAAAAAATGCTGTATTC+TGG - chr3_2:70802005-70802024 Msa0421780:CDS 20.0%
!! TTATATGCATGCAAAATTTA+TGG + chr3_2:70802109-70802128 None:intergenic 20.0%
!! ATGTATTAAGAAACTTCAAT+TGG + chr3_2:70802358-70802377 None:intergenic 20.0%
!! AATCTACATAATAGATATGA+AGG + chr3_2:70802533-70802552 None:intergenic 20.0%
!!! TGGCTAATATTTTAAATTGT+TGG - chr3_2:70802607-70802626 Msa0421780:intron 20.0%
!! TATGATATAAATACAACAGT+TGG - chr3_2:70802719-70802738 Msa0421780:intron 20.0%
!! AATAACTAATGATATCATGA+AGG - chr3_2:70804571-70804590 Msa0421780:intron 20.0%
!! TCGATTAATAAATCAATTCA+AGG - chr3_2:70804768-70804787 Msa0421780:intron 20.0%
!! CGATTAATAAATCAATTCAA+GGG - chr3_2:70804769-70804788 Msa0421780:intron 20.0%
!! GATTAATAAATCAATTCAAG+GGG - chr3_2:70804770-70804789 Msa0421780:intron 20.0%
!!! TTAGATTCCTTTTATTCATA+AGG - chr3_2:70804798-70804817 Msa0421780:intron 20.0%
! ACATTCAGAAAAAGCTTAAT+TGG + chr3_2:70799905-70799924 None:intergenic 25.0%
! AACTTCGACATTAATCAAAT+TGG + chr3_2:70799957-70799976 None:intergenic 25.0%
!!! AAGATTCCAATTTTTTCATC+GGG + chr3_2:70800022-70800041 None:intergenic 25.0%
!!! TTTTAAGGAATCTTATCCAT+AGG - chr3_2:70800126-70800145 Msa0421780:three_prime_UTR 25.0%
! ATTTAAGAGAGTGATAGTTT+AGG - chr3_2:70800211-70800230 Msa0421780:three_prime_UTR 25.0%
! TTTAAGAGAGTGATAGTTTA+GGG - chr3_2:70800212-70800231 Msa0421780:three_prime_UTR 25.0%
!! TTTTATGTCTCTGTTATCTA+TGG - chr3_2:70800259-70800278 Msa0421780:three_prime_UTR 25.0%
! ATTAAAAATAGAGGAAACAG+AGG + chr3_2:70800771-70800790 None:intergenic 25.0%
! ATATAAAACAATAGAGGTCA+CGG - chr3_2:70800946-70800965 Msa0421780:three_prime_UTR 25.0%
! AAAAAGTAAGTTTAAAGGAG+AGG + chr3_2:70801120-70801139 None:intergenic 25.0%
! AAAAACCATATGTGAAACTA+TGG + chr3_2:70802140-70802159 None:intergenic 25.0%
!! ATTGCCATTTCAGATTATTA+GGG + chr3_2:70802173-70802192 None:intergenic 25.0%
!! TATTGCCATTTCAGATTATT+AGG + chr3_2:70802174-70802193 None:intergenic 25.0%
! CATTAAATATAGCAATGGAT+AGG + chr3_2:70803161-70803180 None:intergenic 25.0%
! TTGCACATTAAATATAGCAA+TGG + chr3_2:70803166-70803185 None:intergenic 25.0%
! AATTGACACATATTATGAGA+AGG + chr3_2:70803327-70803346 None:intergenic 25.0%
!!! ATTTGTTGTATTAACTGAGA+TGG - chr3_2:70803344-70803363 Msa0421780:intron 25.0%
!! TATTAACTGAGATGGTATTT+TGG - chr3_2:70803352-70803371 Msa0421780:intron 25.0%
! AGTTGTACTTAAAATGCAAA+AGG + chr3_2:70803479-70803498 None:intergenic 25.0%
! TTGGAAACTTCAATTGTTTA+TGG + chr3_2:70803517-70803536 None:intergenic 25.0%
! CTGAATAATCTAAAAACACT+TGG + chr3_2:70803536-70803555 None:intergenic 25.0%
!!! CAAGTGTTTTTAGATTATTC+AGG - chr3_2:70803534-70803553 Msa0421780:CDS 25.0%
!! CCATTAAAAAAATCTAGGAT+TGG + chr3_2:70803732-70803751 None:intergenic 25.0%
!!! CCAATCCTAGATTTTTTTAA+TGG - chr3_2:70803729-70803748 Msa0421780:intron 25.0%
! CATGACCATTAAAAAAATCT+AGG + chr3_2:70803737-70803756 None:intergenic 25.0%
! TAATAATTCTTCGCTTACAT+TGG - chr3_2:70804280-70804299 Msa0421780:CDS 25.0%
! AATTAGCACATATTTCACTT+GGG + chr3_2:70804458-70804477 None:intergenic 25.0%
! AAATTAGCACATATTTCACT+TGG + chr3_2:70804459-70804478 None:intergenic 25.0%
! ATAATCAAATAATGCTTCTC+AGG + chr3_2:70804722-70804741 None:intergenic 25.0%
! TTGAAAAGAAATGAAGAACT+CGG - chr3_2:70804876-70804895 Msa0421780:intron 25.0%
GAAACGAGATCGATTAATTA+GGG + chr3_2:70799818-70799837 None:intergenic 30.0%
AGAAACGAGATCGATTAATT+AGG + chr3_2:70799819-70799838 None:intergenic 30.0%
AATTGACAAAACCCTAATTG+AGG + chr3_2:70799846-70799865 None:intergenic 30.0%
AAGCTTAATTGGATCGAATT+GGG + chr3_2:70799894-70799913 None:intergenic 30.0%
AAAGCTTAATTGGATCGAAT+TGG + chr3_2:70799895-70799914 None:intergenic 30.0%
!!! AGATTCCAATTTTTTCATCG+GGG + chr3_2:70800021-70800040 None:intergenic 30.0%
!! ATCTTATCCATAGGTTTTGA+CGG - chr3_2:70800135-70800154 Msa0421780:three_prime_UTR 30.0%
!!! TGACGGATTTGTTGTATTTT+AGG - chr3_2:70800152-70800171 Msa0421780:three_prime_UTR 30.0%
! TCAACATATTCTGTGTTACT+TGG - chr3_2:70800291-70800310 Msa0421780:three_prime_UTR 30.0%
CATAGCAAGAATTTGTATTG+CGG + chr3_2:70800404-70800423 None:intergenic 30.0%
!! GAGTTTTGACATATGCTATT+TGG - chr3_2:70801068-70801087 Msa0421780:three_prime_UTR 30.0%
! TTTGACATATGCTATTTGGT+TGG - chr3_2:70801072-70801091 Msa0421780:three_prime_UTR 30.0%
! TTGATTGAATGATGGGAAAA+GGG + chr3_2:70801464-70801483 None:intergenic 30.0%
CATTCAGTTGATTGAATGAT+GGG + chr3_2:70801471-70801490 None:intergenic 30.0%
AATTCAGTTGCTTGAATGAT+GGG + chr3_2:70801510-70801529 None:intergenic 30.0%
AAATTCAGTTGCTTGAATGA+TGG + chr3_2:70801511-70801530 None:intergenic 30.0%
ATACAAGAAAGAATGCAGAT+TGG + chr3_2:70801853-70801872 None:intergenic 30.0%
CTTATCCATAGTTTCACATA+TGG - chr3_2:70802132-70802151 Msa0421780:intron 30.0%
TGATCCCTAATAATCTGAAA+TGG - chr3_2:70802166-70802185 Msa0421780:intron 30.0%
AAATTGCACAATCAGAAAGA+AGG + chr3_2:70802197-70802216 None:intergenic 30.0%
TTTCTGATTGTGCAATTTGA+TGG - chr3_2:70802199-70802218 Msa0421780:intron 30.0%
TTAACTAAGTATAGCAAACC+TGG + chr3_2:70802318-70802337 None:intergenic 30.0%
TTGCATCTATACGGAAAAAT+GGG + chr3_2:70802398-70802417 None:intergenic 30.0%
! AAATTGACGTTACCACATTT+TGG + chr3_2:70802444-70802463 None:intergenic 30.0%
TCATCCATGCTTATAATCTA+TGG - chr3_2:70802587-70802606 Msa0421780:intron 30.0%
TTAGCCATAGATTATAAGCA+TGG + chr3_2:70802594-70802613 None:intergenic 30.0%
TGAAGGTTAGCAAATTGAAA+AGG + chr3_2:70802948-70802967 None:intergenic 30.0%
TCTGTTGCAACAATAAATGA+AGG + chr3_2:70802965-70802984 None:intergenic 30.0%
TTTATTGTTGCAACAGAGAT+TGG - chr3_2:70802968-70802987 Msa0421780:intron 30.0%
AACAAAAGAATCCAAATGAC+AGG + chr3_2:70803098-70803117 None:intergenic 30.0%
AGGTACAAAGGAAATAAACT+AGG + chr3_2:70803141-70803160 None:intergenic 30.0%
ATCTTTATGCCAGAAAAATC+TGG + chr3_2:70803409-70803428 None:intergenic 30.0%
!!! TCCAGTTTTAAGTTTCCTTT+TGG - chr3_2:70803439-70803458 Msa0421780:CDS 30.0%
ACCAAAAGGAAACTTAAAAC+TGG + chr3_2:70803443-70803462 None:intergenic 30.0%
!!! ACATTTCAGTTTTAGCTTGT+TGG - chr3_2:70803559-70803578 Msa0421780:CDS 30.0%
AGGGATTCTATACATATTTG+GGG + chr3_2:70804085-70804104 None:intergenic 30.0%
CAGGGATTCTATACATATTT+GGG + chr3_2:70804086-70804105 None:intergenic 30.0%
TCAGGGATTCTATACATATT+TGG + chr3_2:70804087-70804106 None:intergenic 30.0%
! GTTATTTGAACCACCATTTT+TGG - chr3_2:70804212-70804231 Msa0421780:CDS 30.0%
!! ACCATTTTTGGACAACTTAT+GGG - chr3_2:70804224-70804243 Msa0421780:CDS 30.0%
CACATTGTCTTGTATATCTT+TGG - chr3_2:70804317-70804336 Msa0421780:intron 30.0%
GTTATTTGAACATCCACTTT+GGG + chr3_2:70804359-70804378 None:intergenic 30.0%
! TGTTATTTGAACATCCACTT+TGG + chr3_2:70804360-70804379 None:intergenic 30.0%
TTTCAGATTAGAGAGAATGA+TGG + chr3_2:70804406-70804425 None:intergenic 30.0%
! TGCTCTTTTCTACTTCTATT+AGG - chr3_2:70804632-70804651 Msa0421780:intron 30.0%
GTGATGATACAAGTAATTCA+GGG + chr3_2:70804687-70804706 None:intergenic 30.0%
TGTGATGATACAAGTAATTC+AGG + chr3_2:70804688-70804707 None:intergenic 30.0%
GTGAACACCTTATGAATAAA+AGG + chr3_2:70804808-70804827 None:intergenic 30.0%
!! AATGGCTGGACATTTTAAAA+AGG - chr3_2:70804959-70804978 Msa0421780:intron 30.0%
ACTCCTTTAATGCAAAATGT+GGG + chr3_2:70805003-70805022 None:intergenic 30.0%
AACTCCTTTAATGCAAAATG+TGG + chr3_2:70805004-70805023 None:intergenic 30.0%
TTCGAAAGCGAAATTGAAGA+AGG + chr3_2:70799795-70799814 None:intergenic 35.0%
!!! ATTCCAATTTTTTCATCGGG+GGG + chr3_2:70800019-70800038 None:intergenic 35.0%
!!! GATTCCAATTTTTTCATCGG+GGG + chr3_2:70800020-70800039 None:intergenic 35.0%
!!! GTGCGTTACCATTTGTTTTA+AGG - chr3_2:70800111-70800130 Msa0421780:three_prime_UTR 35.0%
AACAAATCCGTCAAAACCTA+TGG + chr3_2:70800145-70800164 None:intergenic 35.0%
ATAGTGGTGAGTGTGAAAAT+AGG + chr3_2:70800373-70800392 None:intergenic 35.0%
GCAATGTCAATTTCTCTTTC+AGG - chr3_2:70800562-70800581 Msa0421780:three_prime_UTR 35.0%
CTTACAGAATTATGATCAGC+AGG + chr3_2:70800624-70800643 None:intergenic 35.0%
AAAATAGAGGAAACAGAGGA+TGG + chr3_2:70800767-70800786 None:intergenic 35.0%
! ATATGCTATTTGGTTGGACA+TGG - chr3_2:70801078-70801097 Msa0421780:three_prime_UTR 35.0%
! TATGCTATTTGGTTGGACAT+GGG - chr3_2:70801079-70801098 Msa0421780:three_prime_UTR 35.0%
ACCAATATAAATTGAAGGGG+GGG + chr3_2:70801249-70801268 None:intergenic 35.0%
CACCAATATAAATTGAAGGG+GGG + chr3_2:70801250-70801269 None:intergenic 35.0%
GCACCAATATAAATTGAAGG+GGG + chr3_2:70801251-70801270 None:intergenic 35.0%
GGCACCAATATAAATTGAAG+GGG + chr3_2:70801252-70801271 None:intergenic 35.0%
GGGCACCAATATAAATTGAA+GGG + chr3_2:70801253-70801272 None:intergenic 35.0%
TGAATAAAGACCCATAAGGT+GGG + chr3_2:70801274-70801293 None:intergenic 35.0%
TTGAATAAAGACCCATAAGG+TGG + chr3_2:70801275-70801294 None:intergenic 35.0%
CCATTGAATAAAGACCCATA+AGG + chr3_2:70801278-70801297 None:intergenic 35.0%
CCTTATGGGTCTTTATTCAA+TGG - chr3_2:70801275-70801294 Msa0421780:three_prime_UTR 35.0%
GCTAGATGTAATGGTCTATA+CGG + chr3_2:70801386-70801405 None:intergenic 35.0%
TATAGACCATTACATCTAGC+AGG - chr3_2:70801386-70801405 Msa0421780:three_prime_UTR 35.0%
! GTTGATTGAATGATGGGAAA+AGG + chr3_2:70801465-70801484 None:intergenic 35.0%
CCATTCAGTTGATTGAATGA+TGG + chr3_2:70801472-70801491 None:intergenic 35.0%
CCATCATTCAATCAACTGAA+TGG - chr3_2:70801469-70801488 Msa0421780:three_prime_UTR 35.0%
! TTGCTTGAATGATGGGAAAA+GGG + chr3_2:70801503-70801522 None:intergenic 35.0%
!! TTTGTTGGTGATTATTTGGC+AGG - chr3_2:70801682-70801701 Msa0421780:three_prime_UTR 35.0%
AATATAGCTTCGTAAAGCCT+AGG + chr3_2:70802065-70802084 None:intergenic 35.0%
GATGACAAGTCTCAGAAAAA+GGG - chr3_2:70802291-70802310 Msa0421780:intron 35.0%
TGCATCTATACGGAAAAATG+GGG + chr3_2:70802397-70802416 None:intergenic 35.0%
GTTGCATCTATACGGAAAAA+TGG + chr3_2:70802399-70802418 None:intergenic 35.0%
!! GGATATGATTATTTTGCTGC+AGG - chr3_2:70802628-70802647 Msa0421780:intron 35.0%
AGTGTTCTTATCAGACTTTG+AGG + chr3_2:70802654-70802673 None:intergenic 35.0%
! TTTTGATCTGGAGATGATGA+GGG + chr3_2:70802903-70802922 None:intergenic 35.0%
!! ATTTTGATCTGGAGATGATG+AGG + chr3_2:70802904-70802923 None:intergenic 35.0%
ATCTCCAGATCAAAATGAAC+AGG - chr3_2:70802908-70802927 Msa0421780:intron 35.0%
!! CAAACCTGTTCATTTTGATC+TGG + chr3_2:70802915-70802934 None:intergenic 35.0%
ATAGCAATGGATAGGTACAA+AGG + chr3_2:70803153-70803172 None:intergenic 35.0%
AAACATGTCTTAGTACTCAC+TGG + chr3_2:70803201-70803220 None:intergenic 35.0%
TGAGTACTAAGACATGTTTG+AGG - chr3_2:70803202-70803221 Msa0421780:intron 35.0%
GAGTACTAAGACATGTTTGA+GGG - chr3_2:70803203-70803222 Msa0421780:intron 35.0%
GACACATATTATGAGAAGGT+GGG + chr3_2:70803323-70803342 None:intergenic 35.0%
TGACACATATTATGAGAAGG+TGG + chr3_2:70803324-70803343 None:intergenic 35.0%
!! ACTGCTTTTAGTTAGTTGTG+TGG - chr3_2:70803655-70803674 Msa0421780:intron 35.0%
AAAACCTAGTATCATCAGCT+GGG + chr3_2:70803771-70803790 None:intergenic 35.0%
AAAAACCTAGTATCATCAGC+TGG + chr3_2:70803772-70803791 None:intergenic 35.0%
! AGCTGATGATACTAGGTTTT+TGG - chr3_2:70803771-70803790 Msa0421780:intron 35.0%
! GCTGATGATACTAGGTTTTT+GGG - chr3_2:70803772-70803791 Msa0421780:intron 35.0%
!! ATGATACTAGGTTTTTGGGA+GGG - chr3_2:70803776-70803795 Msa0421780:intron 35.0%
AATCTTTGTGAGTGCTTTGT+TGG - chr3_2:70803801-70803820 Msa0421780:intron 35.0%
! ATCTTTGTGAGTGCTTTGTT+GGG - chr3_2:70803802-70803821 Msa0421780:intron 35.0%
AATCTTTGTGAGTGCTTTGT+TGG - chr3_2:70803801-70803820 Msa0421780:intron 35.0%
! ATCTTTGTGAGTGCTTTGTT+GGG - chr3_2:70803802-70803821 Msa0421780:intron 35.0%
ACATAGATTAGCACTCAGTA+TGG + chr3_2:70803870-70803889 None:intergenic 35.0%
ACACAATGGGAAACAGAATA+TGG + chr3_2:70803911-70803930 None:intergenic 35.0%
AACTCTCCATGTAATTGACA+CGG + chr3_2:70804013-70804032 None:intergenic 35.0%
GAGAGTTAAAATGCACTCTT+GGG - chr3_2:70804026-70804045 Msa0421780:intron 35.0%
TACTTGCACTTTACCTGTAT+AGG - chr3_2:70804059-70804078 Msa0421780:intron 35.0%
TGTATAGAATCCCTGAATAC+CGG - chr3_2:70804091-70804110 Msa0421780:intron 35.0%
CATAAGTTGTCCAAAAATGG+TGG + chr3_2:70804225-70804244 None:intergenic 35.0%
!! CACCATTTTTGGACAACTTA+TGG - chr3_2:70804223-70804242 Msa0421780:CDS 35.0%
TCCCATAAGTTGTCCAAAAA+TGG + chr3_2:70804228-70804247 None:intergenic 35.0%
CACATTGTCTTGTATACCTT+TGG + chr3_2:70804254-70804273 None:intergenic 35.0%
! CAAAGGTATACAAGACAATG+TGG - chr3_2:70804252-70804271 Msa0421780:CDS 35.0%
! ATATTTCACTTGGGTGTCAT+TGG + chr3_2:70804449-70804468 None:intergenic 35.0%
TAGTTGAATCGTAATGTCAG+TGG + chr3_2:70804518-70804537 None:intergenic 35.0%
ACTAATGATATCATGAAGGC+TGG - chr3_2:70804575-70804594 Msa0421780:intron 35.0%
TTGACTCATGTAATTGACAC+AGG + chr3_2:70804603-70804622 None:intergenic 35.0%
ATTCATATTTGGGGACTACA+GGG + chr3_2:70804659-70804678 None:intergenic 35.0%
AGGGATTGCATTCATATTTG+GGG + chr3_2:70804668-70804687 None:intergenic 35.0%
CAGGGATTGCATTCATATTT+GGG + chr3_2:70804669-70804688 None:intergenic 35.0%
TCAGGGATTGCATTCATATT+TGG + chr3_2:70804670-70804689 None:intergenic 35.0%
AATAATGCTTCTCAGGAGAA+GGG + chr3_2:70804715-70804734 None:intergenic 35.0%
AAATAATGCTTCTCAGGAGA+AGG + chr3_2:70804716-70804735 None:intergenic 35.0%
AAAAGAAATGAAGAACTCGG+CGG - chr3_2:70804879-70804898 Msa0421780:intron 35.0%
! TCACCCACATTTTGCATTAA+AGG - chr3_2:70804997-70805016 Msa0421780:intron 35.0%
CCTCATATTGTATGCTTCAA+AGG + chr3_2:70805153-70805172 None:intergenic 35.0%
!! CCTTTGAAGCATACAATATG+AGG - chr3_2:70805150-70805169 Msa0421780:five_prime_UTR 35.0%
GACAAAACCCTAATTGAGGT+GGG + chr3_2:70799842-70799861 None:intergenic 40.0%
TGACAAAACCCTAATTGAGG+TGG + chr3_2:70799843-70799862 None:intergenic 40.0%
GGGGGGTTAATTAAGCAAAA+AGG + chr3_2:70800002-70800021 None:intergenic 40.0%
TAACCCCCCGATGAAAAAAT+TGG - chr3_2:70800013-70800032 Msa0421780:three_prime_UTR 40.0%
! TCAATCTGTTTTGCCTTTGC+AGG - chr3_2:70800043-70800062 Msa0421780:three_prime_UTR 40.0%
TTCCTGTTATCAACCTGCAA+AGG + chr3_2:70800059-70800078 None:intergenic 40.0%
TATTGCGGAACGTAACATAG+TGG + chr3_2:70800389-70800408 None:intergenic 40.0%
AAATTGACATTGCCGCAACT+GGG + chr3_2:70800555-70800574 None:intergenic 40.0%
TGTTCATCGTTGTGTCTCTT+GGG - chr3_2:70800824-70800843 Msa0421780:three_prime_UTR 40.0%
! GGGGCACCAATATAAATTGA+AGG + chr3_2:70801254-70801273 None:intergenic 40.0%
GAATAAAGACCCATAAGGTG+GGG + chr3_2:70801273-70801292 None:intergenic 40.0%
AGTAAATGGAACCTCATAGG+GGG + chr3_2:70801312-70801331 None:intergenic 40.0%
CAGTAAATGGAACCTCATAG+GGG + chr3_2:70801313-70801332 None:intergenic 40.0%
CCAGTAAATGGAACCTCATA+GGG + chr3_2:70801314-70801333 None:intergenic 40.0%
TCCAGTAAATGGAACCTCAT+AGG + chr3_2:70801315-70801334 None:intergenic 40.0%
TATGAGGTTCCATTTACTGG+AGG - chr3_2:70801314-70801333 Msa0421780:three_prime_UTR 40.0%
TCAGCCTATCAGTACAGTTA+TGG - chr3_2:70801338-70801357 Msa0421780:three_prime_UTR 40.0%
! GCTTCCATAACTGTACTGAT+AGG + chr3_2:70801345-70801364 None:intergenic 40.0%
! TGAATGATGGGAAAAGGGAA+AGG + chr3_2:70801459-70801478 None:intergenic 40.0%
! GTTGCTTGAATGATGGGAAA+AGG + chr3_2:70801504-70801523 None:intergenic 40.0%
! TTGGTGATTATTTGGCAGGT+GGG - chr3_2:70801686-70801705 Msa0421780:three_prime_UTR 40.0%
CTAACTGCAGAACGTGATTA+AGG + chr3_2:70801891-70801910 None:intergenic 40.0%
CTTAATCACGTTCTGCAGTT+AGG - chr3_2:70801889-70801908 Msa0421780:CDS 40.0%
!! TCTTCTCTGAAGCATCAGTA+TGG - chr3_2:70801970-70801989 Msa0421780:CDS 40.0%
ACAAGTACGAGTATGGTACT+GGG + chr3_2:70802038-70802057 None:intergenic 40.0%
TTGTCATCGCGAAAAAATCC+TGG + chr3_2:70802279-70802298 None:intergenic 40.0%
CGATGACAAGTCTCAGAAAA+AGG - chr3_2:70802290-70802309 Msa0421780:intron 40.0%
GCATCTATACGGAAAAATGG+GGG + chr3_2:70802396-70802415 None:intergenic 40.0%
TGTCACGAGTTGCATCTATA+CGG + chr3_2:70802407-70802426 None:intergenic 40.0%
ATGCAACTCGTGACAATGAT+TGG - chr3_2:70802412-70802431 Msa0421780:CDS 40.0%
TGCAACTCGTGACAATGATT+GGG - chr3_2:70802413-70802432 Msa0421780:CDS 40.0%
ACAATTCTGTCTGTTGCACT+TGG + chr3_2:70802847-70802866 None:intergenic 40.0%
AAGTGCAACAGACAGAATTG+TGG - chr3_2:70802846-70802865 Msa0421780:intron 40.0%
CTCTTATGCTTCCTGTCATT+TGG - chr3_2:70803084-70803103 Msa0421780:CDS 40.0%
TGACAACTTCTGCAACATAG+AGG + chr3_2:70803295-70803314 None:intergenic 40.0%
!!! AGATGGTATTTTGGTCTCTG+TGG - chr3_2:70803361-70803380 Msa0421780:intron 40.0%
! ATGTGTCAGCCAGATTTTTC+TGG - chr3_2:70803397-70803416 Msa0421780:intron 40.0%
TCTGGCATAAAGATTGTTGC+AGG - chr3_2:70803415-70803434 Msa0421780:CDS 40.0%
GCATACATGCTAAAAGTGGT+AGG + chr3_2:70803602-70803621 None:intergenic 40.0%
AGCAGTGACTCGAAAGTAAA+CGG + chr3_2:70803641-70803660 None:intergenic 40.0%
!! GATGATACTAGGTTTTTGGG+AGG - chr3_2:70803775-70803794 Msa0421780:intron 40.0%
GGAGAGTTAAAATGCACTCT+TGG - chr3_2:70804025-70804044 Msa0421780:intron 40.0%
! TACATATTTGGGGCCTATAC+AGG + chr3_2:70804075-70804094 None:intergenic 40.0%
GTATAGAATCCCTGAATACC+GGG - chr3_2:70804092-70804111 Msa0421780:intron 40.0%
GTGCTAATCGGATTTCACTT+TGG - chr3_2:70804116-70804135 Msa0421780:intron 40.0%
ACAAAGACACCAAAGACCAA+AGG + chr3_2:70804144-70804163 None:intergenic 40.0%
ACAACTTATGGGACAACCAA+AGG - chr3_2:70804235-70804254 Msa0421780:CDS 40.0%
TTCATATTTGGGGACTACAG+GGG + chr3_2:70804658-70804677 None:intergenic 40.0%
CATTCATATTTGGGGACTAC+AGG + chr3_2:70804660-70804679 None:intergenic 40.0%
! AGAAGTCACTTGTTGCACTT+TGG - chr3_2:70804912-70804931 Msa0421780:intron 40.0%
!! TTGTTGCACTTTGGTCTTGA+AGG - chr3_2:70804921-70804940 Msa0421780:intron 40.0%
ATGTGGGTGATGAGATCATT+GGG + chr3_2:70804987-70805006 None:intergenic 40.0%
AATGTGGGTGATGAGATCAT+TGG + chr3_2:70804988-70805007 None:intergenic 40.0%
AAGGTTCTACAGAAGTTGCA+TGG + chr3_2:70805134-70805153 None:intergenic 40.0%
AGCGTTGTAAAAGAGGCTTT+GGG + chr3_2:70805190-70805209 None:intergenic 40.0%
ATCAAGCAGCGTTGTAAAAG+AGG + chr3_2:70805197-70805216 None:intergenic 40.0%
TCCTTCTACTACTTCTCGAG+CGG + chr3_2:70799680-70799699 None:intergenic 45.0%
GGGAATTACCTGAGACATGA+CGG + chr3_2:70799760-70799779 None:intergenic 45.0%
GAAGAAGGCGATGAATCGAA+GGG + chr3_2:70799780-70799799 None:intergenic 45.0%
TGAAGAAGGCGATGAATCGA+AGG + chr3_2:70799781-70799800 None:intergenic 45.0%
TCGTTTCTCCCACCTCAATT+AGG - chr3_2:70799831-70799850 Msa0421780:three_prime_UTR 45.0%
CGTTTCTCCCACCTCAATTA+GGG - chr3_2:70799832-70799851 Msa0421780:three_prime_UTR 45.0%
!! TGCCTTTGCAGGTTGATAAC+AGG - chr3_2:70800054-70800073 Msa0421780:three_prime_UTR 45.0%
TAAGTCCCTTTCCTCTAGCA+AGG - chr3_2:70800452-70800471 Msa0421780:three_prime_UTR 45.0%
AAGTCCCTTTCCTCTAGCAA+GGG - chr3_2:70800453-70800472 Msa0421780:three_prime_UTR 45.0%
ATATCAGATCCCCTTGCTAG+AGG + chr3_2:70800466-70800485 None:intergenic 45.0%
TCTAGCAAGGGGATCTGATA+TGG - chr3_2:70800465-70800484 Msa0421780:three_prime_UTR 45.0%
!! TTTTGTTTGTAGGTAGCCGC+AGG - chr3_2:70800511-70800530 Msa0421780:three_prime_UTR 45.0%
TTTGTTTGTAGGTAGCCGCA+GGG - chr3_2:70800512-70800531 Msa0421780:three_prime_UTR 45.0%
ATGTCCAATCATCTTCCCTG+CGG + chr3_2:70800530-70800549 None:intergenic 45.0%
GAAATTGACATTGCCGCAAC+TGG + chr3_2:70800556-70800575 None:intergenic 45.0%
GAATTATGATCAGCAGGCCT+TGG + chr3_2:70800618-70800637 None:intergenic 45.0%
ACAGAGGATGGACAATGCAA+AGG + chr3_2:70800755-70800774 None:intergenic 45.0%
CTGTTCATCGTTGTGTCTCT+TGG - chr3_2:70800823-70800842 Msa0421780:three_prime_UTR 45.0%
ATAAGGAGCTGCGGATGAAT+AGG + chr3_2:70801213-70801232 None:intergenic 45.0%
! TCATCCGCAGCTCCTTATTT+AGG - chr3_2:70801215-70801234 Msa0421780:three_prime_UTR 45.0%
GCCCCCCCTTCAATTTATAT+TGG - chr3_2:70801245-70801264 Msa0421780:three_prime_UTR 45.0%
! TATATTGGTGCCCCACCTTA+TGG - chr3_2:70801260-70801279 Msa0421780:three_prime_UTR 45.0%
! ATATTGGTGCCCCACCTTAT+GGG - chr3_2:70801261-70801280 Msa0421780:three_prime_UTR 45.0%
GTAAATGGAACCTCATAGGG+GGG + chr3_2:70801311-70801330 None:intergenic 45.0%
CCCTATGAGGTTCCATTTAC+TGG - chr3_2:70801311-70801330 Msa0421780:three_prime_UTR 45.0%
TAGGCTGATCCTCCAGTAAA+TGG + chr3_2:70801326-70801345 None:intergenic 45.0%
!! GTTGGTGATTATTTGGCAGG+TGG - chr3_2:70801685-70801704 Msa0421780:three_prime_UTR 45.0%
TTATCCCATACCATTGCTCC+AGG + chr3_2:70801766-70801785 None:intergenic 45.0%
CACAAGTACGAGTATGGTAC+TGG + chr3_2:70802039-70802058 None:intergenic 45.0%
AGGATGCACAAGTACGAGTA+TGG + chr3_2:70802045-70802064 None:intergenic 45.0%
TACTCGTACTTGTGCATCCT+AGG - chr3_2:70802045-70802064 Msa0421780:CDS 45.0%
TAGTTAACCCTTGCCTTAGC+AGG - chr3_2:70802245-70802264 Msa0421780:intron 45.0%
AGTTAACCCTTGCCTTAGCA+GGG - chr3_2:70802246-70802265 Msa0421780:intron 45.0%
AAGTCTCAGAAAAAGGGACC+AGG - chr3_2:70802297-70802316 Msa0421780:intron 45.0%
GATTGGGCTTGTCCAAAATG+TGG - chr3_2:70802429-70802448 Msa0421780:intron 45.0%
AAATGCAACACACCCAAACC+CGG - chr3_2:70802492-70802511 Msa0421780:intron 45.0%
GATATGAAGGCAGCATACCT+GGG + chr3_2:70802520-70802539 None:intergenic 45.0%
AGATATGAAGGCAGCATACC+TGG + chr3_2:70802521-70802540 None:intergenic 45.0%
CCAATCAGAGCAAAAGATGC+CGG - chr3_2:70802770-70802789 Msa0421780:intron 45.0%
!! TGTTGCACTTGGTTCGGAAT+GGG + chr3_2:70802836-70802855 None:intergenic 45.0%
TCTGTCTGTTGCACTTGGTT+CGG + chr3_2:70802842-70802861 None:intergenic 45.0%
GACATGTTTGAGGGTTGAGA+AGG - chr3_2:70803212-70803231 Msa0421780:intron 45.0%
TCTTCCAGCATTGCTCAGTT+TGG - chr3_2:70803245-70803264 Msa0421780:intron 45.0%
CTTCCAGCATTGCTCAGTTT+GGG - chr3_2:70803246-70803265 Msa0421780:intron 45.0%
GCAGACAGTTCAGAACCAAA+AGG + chr3_2:70803457-70803476 None:intergenic 45.0%
TGGCGCATACATGCTAAAAG+TGG + chr3_2:70803606-70803625 None:intergenic 45.0%
GTAAACGGTTTCTGTGATGC+TGG + chr3_2:70803626-70803645 None:intergenic 45.0%
! TGCTTTGTTGGGTCCATACT+GGG - chr3_2:70803813-70803832 Msa0421780:intron 45.0%
CATGTAATTGACACGGCTGA+CGG + chr3_2:70804006-70804025 None:intergenic 45.0%
ATTAGCACTCCCGGTATTCA+GGG + chr3_2:70804104-70804123 None:intergenic 45.0%
!! TGAATACCGGGAGTGCTAAT+CGG - chr3_2:70804104-70804123 Msa0421780:intron 45.0%
TGAAATCCGATTAGCACTCC+CGG + chr3_2:70804113-70804132 None:intergenic 45.0%
!! GGATTTCACTTTGGTGCCTT+TGG - chr3_2:70804125-70804144 Msa0421780:intron 45.0%
!! ACTTTGGTGCCTTTGGTCTT+TGG - chr3_2:70804132-70804151 Msa0421780:intron 45.0%
!! TCCACTTTGGGACAACTTGT+GGG + chr3_2:70804347-70804366 None:intergenic 45.0%
!! ATCCACTTTGGGACAACTTG+TGG + chr3_2:70804348-70804367 None:intergenic 45.0%
!!! TCATTGGCACTTGGTGCTTT+TGG + chr3_2:70804433-70804452 None:intergenic 45.0%
TCCAGCCATTTCTCGTCATT+GGG + chr3_2:70804949-70804968 None:intergenic 45.0%
TGTGGGTGATGAGATCATTG+GGG + chr3_2:70804986-70805005 None:intergenic 45.0%
GCATCAAGCCTGACTACAAT+CGG - chr3_2:70805078-70805097 Msa0421780:exon 45.0%
CAGCGTTGTAAAAGAGGCTT+TGG + chr3_2:70805191-70805210 None:intergenic 45.0%
!!! ATTGAATTTAATATATTTTA+AGG - chr3_2:70800183-70800202 Msa0421780:three_prime_UTR 5.0%
CTTCTACTACTTCTCGAGCG+GGG + chr3_2:70799678-70799697 None:intergenic 50.0%
CCTTCTACTACTTCTCGAGC+GGG + chr3_2:70799679-70799698 None:intergenic 50.0%
AGTCCCTTTCCTCTAGCAAG+GGG - chr3_2:70800454-70800473 Msa0421780:three_prime_UTR 50.0%
GATCCCCTTGCTAGAGGAAA+GGG + chr3_2:70800460-70800479 None:intergenic 50.0%
AGATCCCCTTGCTAGAGGAA+AGG + chr3_2:70800461-70800480 None:intergenic 50.0%
GGGGATCTGATATGGTTCTC+CGG - chr3_2:70800473-70800492 Msa0421780:three_prime_UTR 50.0%
GATTGGACATGTCCCAGTTG+CGG - chr3_2:70800540-70800559 Msa0421780:three_prime_UTR 50.0%
GGTGCAGTTACGCATATTGC+AGG + chr3_2:70800592-70800611 None:intergenic 50.0%
ATGATCAGCAGGCCTTGGTT+GGG + chr3_2:70800613-70800632 None:intergenic 50.0%
TATGATCAGCAGGCCTTGGT+TGG + chr3_2:70800614-70800633 None:intergenic 50.0%
GAGGCTTCACAGCAGATTTC+TGG + chr3_2:70801175-70801194 None:intergenic 50.0%
GGAGCCTAAATAAGGAGCTG+CGG + chr3_2:70801222-70801241 None:intergenic 50.0%
! ATAAATTGAAGGGGGGGCGT+TGG + chr3_2:70801243-70801262 None:intergenic 50.0%
GCTGGTCCTGCTAGATGTAA+TGG + chr3_2:70801395-70801414 None:intergenic 50.0%
GAACATACCGTGTCCAACCA+CGG + chr3_2:70801435-70801454 None:intergenic 50.0%
ATATGCCATGCCCCAGCTAT+TGG - chr3_2:70801711-70801730 Msa0421780:exon 50.0%
CCATAGCGATCCAATAGCTG+GGG + chr3_2:70801724-70801743 None:intergenic 50.0%
GCCATAGCGATCCAATAGCT+GGG + chr3_2:70801725-70801744 None:intergenic 50.0%
CTATTGGATCGCTATGGCCT+CGG - chr3_2:70801727-70801746 Msa0421780:CDS 50.0%
CCATTGCTCCAGGTCCAATA+GGG + chr3_2:70801756-70801775 None:intergenic 50.0%
ACCATTGCTCCAGGTCCAAT+AGG + chr3_2:70801757-70801776 None:intergenic 50.0%
TTGGACCTGGAGCAATGGTA+TGG - chr3_2:70801758-70801777 Msa0421780:CDS 50.0%
TGGACCTGGAGCAATGGTAT+GGG - chr3_2:70801759-70801778 Msa0421780:CDS 50.0%
! CCGGCATCTTTTGCTCTGAT+TGG + chr3_2:70802773-70802792 None:intergenic 50.0%
ATCAGAGCAAAAGATGCCGG+AGG - chr3_2:70802773-70802792 Msa0421780:intron 50.0%
TCAGAGCAAAAGATGCCGGA+GGG - chr3_2:70802774-70802793 Msa0421780:intron 50.0%
!! CTGTTGCACTTGGTTCGGAA+TGG + chr3_2:70802837-70802856 None:intergenic 50.0%
! GGAGATTTTTCCGACTCAGC+TGG + chr3_2:70802882-70802901 None:intergenic 50.0%
GCAATGCTGGAAGACAACTC+TGG + chr3_2:70803239-70803258 None:intergenic 50.0%
ACACCCAAACTGAGCAATGC+TGG + chr3_2:70803252-70803271 None:intergenic 50.0%
AGCACCCAGCTGATGATACT+AGG - chr3_2:70803764-70803783 Msa0421780:intron 50.0%
! GTGCTTTGTTGGGTCCATAC+TGG - chr3_2:70803812-70803831 Msa0421780:intron 50.0%
TTTGTTGGGTCCATACTGGG+CGG - chr3_2:70803816-70803835 Msa0421780:intron 50.0%
! AAAGATTAGCCCGCCCAGTA+TGG + chr3_2:70803829-70803848 None:intergenic 50.0%
CCGTATGTCAGCGACACAAT+GGG + chr3_2:70803924-70803943 None:intergenic 50.0%
! CCCATTGTGTCGCTGACATA+CGG - chr3_2:70803921-70803940 Msa0421780:intron 50.0%
CGTCAGCCGTGTCAATTACA+TGG - chr3_2:70804004-70804023 Msa0421780:intron 50.0%
GATTAGCACTCCCGGTATTC+AGG + chr3_2:70804105-70804124 None:intergenic 50.0%
GGTGGAGAGAGAAGAGAGAT+AGG + chr3_2:70804168-70804187 None:intergenic 50.0%
TCCCACAAGTTGTCCCAAAG+TGG - chr3_2:70804343-70804362 Msa0421780:intron 50.0%
!! ACTTGGGTGTCATTGGCACT+TGG + chr3_2:70804442-70804461 None:intergenic 50.0%
TAATGTCAGTGGTGCGCAGT+AGG + chr3_2:70804507-70804526 None:intergenic 50.0%
AGGTCCCCAATGACGAGAAA+TGG - chr3_2:70804941-70804960 Msa0421780:intron 50.0%
CCAGCCATTTCTCGTCATTG+GGG + chr3_2:70804948-70804967 None:intergenic 50.0%
GTCCAGCCATTTCTCGTCAT+TGG + chr3_2:70804950-70804969 None:intergenic 50.0%
! AGGCTATGCCGATTGTAGTC+AGG + chr3_2:70805089-70805108 None:intergenic 50.0%
CCCGCTCGAGAAGTAGTAGA+AGG - chr3_2:70799676-70799695 Msa0421780:three_prime_UTR 55.0%
ACTGCTCACCGTCATGTCTC+AGG - chr3_2:70799749-70799768 Msa0421780:three_prime_UTR 55.0%
! TGGTAACGCACCATCAGTCC+TGG + chr3_2:70800102-70800121 None:intergenic 55.0%
GTAGCCGCAGGGAAGATGAT+TGG - chr3_2:70800523-70800542 Msa0421780:three_prime_UTR 55.0%
TGCGTAACTGCACCCAACCA+AGG - chr3_2:70800598-70800617 Msa0421780:three_prime_UTR 55.0%
GAAGCCTCTTCAAGCTCCAC+AGG - chr3_2:70801187-70801206 Msa0421780:three_prime_UTR 55.0%
TAGGCCTGTGGAGCTTGAAG+AGG + chr3_2:70801194-70801213 None:intergenic 55.0%
!! GGGGCGTTGGAGCCTAAATA+AGG + chr3_2:70801230-70801249 None:intergenic 55.0%
ATCACCAGTTCCCCCCTATG+AGG - chr3_2:70801298-70801317 Msa0421780:three_prime_UTR 55.0%
TATGGAAGCCGTGTTCCTGC+TGG - chr3_2:70801356-70801375 Msa0421780:three_prime_UTR 55.0%
CCCCAGCTATTGGATCGCTA+TGG - chr3_2:70801721-70801740 Msa0421780:exon 55.0%
GGCCATAGCGATCCAATAGC+TGG + chr3_2:70801726-70801745 None:intergenic 55.0%
!! TATGGCCTCGGTGTCCCTAT+TGG - chr3_2:70801739-70801758 Msa0421780:CDS 55.0%
CCCTATTGGACCTGGAGCAA+TGG - chr3_2:70801753-70801772 Msa0421780:CDS 55.0%
CTAGTGCCCTGCTAAGGCAA+GGG + chr3_2:70802255-70802274 None:intergenic 55.0%
CATACCTGGGATCCGGGTTT+GGG + chr3_2:70802507-70802526 None:intergenic 55.0%
AAGGCAGCATACCTGGGATC+CGG + chr3_2:70802514-70802533 None:intergenic 55.0%
AAAAGATGCCGGAGGGAAGC+TGG - chr3_2:70802781-70802800 Msa0421780:intron 55.0%
TCACACTTCCAGCTTCCCTC+CGG + chr3_2:70802792-70802811 None:intergenic 55.0%
TGCTGACAAGCCAGCTGAGT+CGG - chr3_2:70802869-70802888 Msa0421780:intron 55.0%
TTGTTGGGTCCATACTGGGC+GGG - chr3_2:70803817-70803836 Msa0421780:intron 55.0%
GCCGTATGTCAGCGACACAA+TGG + chr3_2:70803925-70803944 None:intergenic 55.0%
CCCCAATGACGAGAAATGGC+TGG - chr3_2:70804945-70804964 Msa0421780:intron 55.0%
CTACTACTTCTCGAGCGGGG+CGG + chr3_2:70799675-70799694 None:intergenic 60.0%
! GTGAGCAGTGAGTGCTGCGA+GGG + chr3_2:70799738-70799757 None:intergenic 60.0%
ACCATCAGTCCTGGCACGCT+TGG + chr3_2:70800093-70800112 None:intergenic 60.0%
GCTGCGGATGAATAGGCCTG+TGG + chr3_2:70801206-70801225 None:intergenic 60.0%
GGAACCTCATAGGGGGGAAC+TGG + chr3_2:70801305-70801324 None:intergenic 60.0%
! ACGGACTGCCAGCAGGAACA+CGG + chr3_2:70801367-70801386 None:intergenic 60.0%
! GGTCTATACGGACTGCCAGC+AGG + chr3_2:70801374-70801393 None:intergenic 60.0%
GGACCAGCACCATACACCAG+TGG - chr3_2:70801407-70801426 Msa0421780:three_prime_UTR 60.0%
GCTCCACTGGTGTATGGTGC+TGG + chr3_2:70801413-70801432 None:intergenic 60.0%
ACCATACACCAGTGGAGCCG+TGG - chr3_2:70801415-70801434 Msa0421780:three_prime_UTR 60.0%
ACCACGGCTCCACTGGTGTA+TGG + chr3_2:70801419-70801438 None:intergenic 60.0%
TACACCAGTGGAGCCGTGGT+TGG - chr3_2:70801419-70801438 Msa0421780:three_prime_UTR 60.0%
AGTGGAGCCGTGGTTGGACA+CGG - chr3_2:70801425-70801444 Msa0421780:three_prime_UTR 60.0%
GCGATCCAATAGCTGGGGCA+TGG + chr3_2:70801719-70801738 None:intergenic 60.0%
CAGGTCCAATAGGGACACCG+AGG + chr3_2:70801747-70801766 None:intergenic 60.0%
!! CTCGGTGTCCCTATTGGACC+TGG - chr3_2:70801745-70801764 Msa0421780:CDS 60.0%
CCTAGTGCCCTGCTAAGGCA+AGG + chr3_2:70802256-70802275 None:intergenic 60.0%
! CCTTGCCTTAGCAGGGCACT+AGG - chr3_2:70802253-70802272 Msa0421780:intron 60.0%
GCATACCTGGGATCCGGGTT+TGG + chr3_2:70802508-70802527 None:intergenic 60.0%
AGGCAGCATACCTGGGATCC+GGG + chr3_2:70802513-70802532 None:intergenic 60.0%
! GGTGAGCAGTGAGTGCTGCG+AGG + chr3_2:70799739-70799758 None:intergenic 65.0%
AGTCCTGGCACGCTTGGCAG+CGG + chr3_2:70800087-70800106 None:intergenic 65.0%
GCCAAGCGTGCCAGGACTGA+TGG - chr3_2:70800089-70800108 Msa0421780:three_prime_UTR 65.0%
GTGTCCAACCACGGCTCCAC+TGG + chr3_2:70801426-70801445 None:intergenic 65.0%
CCTGGCCTAGTGCCCTGCTA+AGG + chr3_2:70802261-70802280 None:intergenic 65.0%
! CCTTAGCAGGGCACTAGGCC+AGG - chr3_2:70802258-70802277 Msa0421780:intron 65.0%
CACACCCAAACCCGGATCCC+AGG - chr3_2:70802500-70802519 Msa0421780:intron 65.0%
CTTCCGCTGCCAAGCGTGCC+AGG - chr3_2:70800081-70800100 Msa0421780:three_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 70799624 70805220 70799624 ID=Msa0421780;Name=Msa0421780
chr3_2 mRNA 70799624 70805220 70799624 ID=Msa0421780-mRNA-1;Parent=Msa0421780;Name=Msa0421780-mRNA-1;_AED=0.02;_eAED=0.02;_QI=138|1|1|1|1|1|9|2099|347
chr3_2 exon 70799624 70802066 70799624 ID=Msa0421780-mRNA-1:exon:17134;Parent=Msa0421780-mRNA-1
chr3_2 exon 70802170 70802194 70802170 ID=Msa0421780-mRNA-1:exon:17133;Parent=Msa0421780-mRNA-1
chr3_2 exon 70802323 70802432 70802323 ID=Msa0421780-mRNA-1:exon:17132;Parent=Msa0421780-mRNA-1
chr3_2 exon 70802526 70802577 70802526 ID=Msa0421780-mRNA-1:exon:17131;Parent=Msa0421780-mRNA-1
chr3_2 exon 70803070 70803140 70803070 ID=Msa0421780-mRNA-1:exon:17130;Parent=Msa0421780-mRNA-1
chr3_2 exon 70803398 70803668 70803398 ID=Msa0421780-mRNA-1:exon:17129;Parent=Msa0421780-mRNA-1
chr3_2 exon 70804206 70804321 70804206 ID=Msa0421780-mRNA-1:exon:17128;Parent=Msa0421780-mRNA-1
chr3_2 exon 70804734 70804779 70804734 ID=Msa0421780-mRNA-1:exon:17127;Parent=Msa0421780-mRNA-1
chr3_2 exon 70805074 70805220 70805074 ID=Msa0421780-mRNA-1:exon:17126;Parent=Msa0421780-mRNA-1
chr3_2 five_prime_UTR 70805083 70805220 70805083 ID=Msa0421780-mRNA-1:five_prime_utr;Parent=Msa0421780-mRNA-1
chr3_2 CDS 70805074 70805082 70805074 ID=Msa0421780-mRNA-1:cds;Parent=Msa0421780-mRNA-1
chr3_2 CDS 70804734 70804779 70804734 ID=Msa0421780-mRNA-1:cds;Parent=Msa0421780-mRNA-1
chr3_2 CDS 70804206 70804321 70804206 ID=Msa0421780-mRNA-1:cds;Parent=Msa0421780-mRNA-1
chr3_2 CDS 70803398 70803668 70803398 ID=Msa0421780-mRNA-1:cds;Parent=Msa0421780-mRNA-1
chr3_2 CDS 70803070 70803140 70803070 ID=Msa0421780-mRNA-1:cds;Parent=Msa0421780-mRNA-1
chr3_2 CDS 70802526 70802577 70802526 ID=Msa0421780-mRNA-1:cds;Parent=Msa0421780-mRNA-1
chr3_2 CDS 70802323 70802432 70802323 ID=Msa0421780-mRNA-1:cds;Parent=Msa0421780-mRNA-1
chr3_2 CDS 70802170 70802194 70802170 ID=Msa0421780-mRNA-1:cds;Parent=Msa0421780-mRNA-1
chr3_2 CDS 70801723 70802066 70801723 ID=Msa0421780-mRNA-1:cds;Parent=Msa0421780-mRNA-1
chr3_2 three_prime_UTR 70799624 70801722 70799624 ID=Msa0421780-mRNA-1:three_prime_utr;Parent=Msa0421780-mRNA-1
Gene Sequence

>Msa0421780

ATGTCTCAGGTTGATAACAGGAATTCTTCCGCTGCCAAGCGTGCCAGGACTGATGGTAGCCGCAGGGAAGATGATTGGACATGTCCCAGTTGCGGCAATGTCAATTTCTCTTTCAGGACAACCTGCAATATGCGTAACTGCACCCAACCAAGGCCTGCTGATCATAATTCTAAATCTGCTGTGAAGCCTCTTCAAGCTCCACAGGCCTATTCATCCGCAGCTCCTTATTTAGGCTCCAACGCCCCCCCTTCAATTTATATTGGTGCCCCACCTTATGGGTCTTTATTCAATGGATCACCAGTTCCCCCCTATGAGGTTCCATTTACTGGAGGATCAGCCTATCAGTACAGTTATGGAAGCCGTGTTCCTGCTGGCAGTCCGTATAGACCATTACATCTAGCAGGACCAGCACCATACACCAGTGGAGCCGTGGTTGGACACGGTGGGATATATGCCATGCCCCAGCTATTGGATCGCTATGGCCTCGGTGTCCCTATTGGACCTGGAGCAATGGGCACTAGGCCAGGATTTTTTCGCGATGACAAGTCTCAGAAAAAGGGACCAGATGCAACTCGTGACAATGATTGGGCTTGTCCAAAATGTGGTAACGTCAATTTCTCATTTAGAACTGTTTGCAACATGAGAAAATGCAACACACCCAAACCCGGATCCCAGGCCTCAAAGTCTGATAAGAACACTAAGCAAAAGATGCCGGAGGGAAGCTGGAAGTGTGAAAAATGTAATAACATAAATTACCCATTCCGAACCAAGTGCAACAGACAGAATTGTGGTGCTGACAAGCCAGCTGAGTCGGAAAAATCTCCCTCATCATCTCCAGATCAAAATGAACAGGTTTGTTATGCAAAGCCTTTTCAATTTGCTAACCTTCATTTATTGTTGCAACAGAGATTGGTTTTTCATGAGCAGCTTTGTGACATAGTGAATATTTTCAAATTGAAAGCTGTTGTGAAGTTTTTGTTTAAATGTGTTTTTTCTGAAAAAGCTTCTCTTATGCTTCCTGTCATTTGGATTCTTTTGTTGTGA
Protein sequence

>Msa0421780

MSQVDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAVKPLQAPQAYSSAAPYLGSNAPPSIYIGAPPYGSLFNGSPVPPYEVPFTGGSAYQYSYGSRVPAGSPYRPLHLAGPAPYTSGAVVGHGGIYAMPQLLDRYGLGVPIGPGAMGTRPGFFRDDKSQKKGPDATRDNDWACPKCGNVNFSFRTVCNMRKCNTPKPGSQASKSDKNTKQKMPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSSSPDQNEQVCYAKPFQFANLHLLLQQRLVFHEQLCDIVNIFKLKAVVKFLFKCVFSEKASLMLPVIWILLL*